BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00009369
         (438 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009378155.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   162   3e-44
gb|AJE29370.1| putative gag protein [Coffea canephora]                152   6e-42
gb|AAK29467.1| polyprotein-like [Solanum chilense]                    121   2e-29
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   121   3e-29
ref|XP_008807393.1| PREDICTED: uncharacterized protein LOC103719...   105   5e-24
ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712...   105   7e-24
ref|XP_010277636.1| PREDICTED: uncharacterized protein LOC104612...   101   2e-23
gb|KYP53542.1| Retrovirus-related Pol polyprotein from transposo...    99   2e-23
gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subc...   102   5e-23
gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subc...   102   7e-23
ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, part...    97   8e-23
ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, part...    94   7e-22
gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondr...    93   8e-22
gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryz...    99   2e-21
gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposo...    96   2e-21
gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposo...    95   5e-21
gb|KYP62517.1| Retrovirus-related Pol polyprotein from transposo...    94   7e-21
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc...    96   1e-20
gb|KYP36341.1| Retrovirus-related Pol polyprotein from transposo...    93   2e-20
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo...    96   3e-20

>ref|XP_009378155.1| PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Pyrus x
           bretschneideri]
          Length = 670

 Score =  162 bits (411), Expect = 3e-44
 Identities = 84/146 (57%), Positives = 103/146 (70%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDD-SEDSTPE 178
           VKD+L QQGL  ALKGK+GK  +M   QW  L+S CVSTIR CIADN++++   ED  P 
Sbjct: 3   VKDVLTQQGLVRALKGKDGKPKEMTDDQWEELESGCVSTIRHCIADNIINNVMDEDFAPA 62

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW+KLE LY+ K+L+             M EG NLMDHMN F+G +DQL KV VK+EEED
Sbjct: 63  LWEKLEKLYIAKSLTNKLHLKKKLYKLKMDEGGNLMDHMNVFNGYLDQLRKVDVKVEEED 122

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           KALLLL S+PDSY++LVT L + KDT
Sbjct: 123 KALLLLTSLPDSYENLVTTLLHGKDT 148


>gb|AJE29370.1| putative gag protein [Coffea canephora]
          Length = 433

 Score =  152 bits (385), Expect = 6e-42
 Identities = 81/147 (55%), Positives = 101/147 (68%), Gaps = 2/147 (1%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDD--DSEDSTP 175
           VKD+LVQQGLA AL GK  K   M   ++  L +RC STIRL +ADN++++  D +DS  
Sbjct: 26  VKDVLVQQGLAKALNGKNKKPESMNDDEFEELDARCASTIRLYVADNIINNVIDEKDSAA 85

Query: 176 ELWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEE 355
           +LWKKLE LYL K+LS             M EG +LMDHMN F+G++DQL KVGV IEEE
Sbjct: 86  DLWKKLEKLYLAKSLSNKLHLKRQFYALKMVEGGSLMDHMNTFNGILDQLQKVGVDIEEE 145

Query: 356 DKALLLLASIPDSYDSLVTMLQYEKDT 436
           +KALLLL  + DSY+S+VT L Y KDT
Sbjct: 146 NKALLLLTPVSDSYESVVTTLLYGKDT 172


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score =  121 bits (304), Expect = 2e-29
 Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDD-SEDSTPE 178
           +KDLL+QQGL  AL GK  K   MK   W  L  +  S IRL + D+VV++   E+S   
Sbjct: 25  MKDLLIQQGLHKALGGKSKKPESMKLEDWEELDEKAASAIRLHLTDDVVNNIVDEESACG 84

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           +W KLENLY+ K L+             M EG N + H+N  +GL+ QL  +GVKIEEED
Sbjct: 85  IWTKLENLYMSKTLTNKLYLKKQLYTLHMDEGTNFLSHLNVLNGLITQLANLGVKIEEED 144

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           K ++LL S+P SYD+L T + + KD+
Sbjct: 145 KRIVLLNSLPSSYDTLSTTILHGKDS 170


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score =  121 bits (303), Expect = 3e-29
 Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDD-SEDSTPE 178
           ++DLL+QQGL   L     K   MK   WA+L  R  S IRL ++D+VV++   ED+   
Sbjct: 24  MRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARG 83

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           +W +LE+LY+ K L+             M EG N + H+N F+GL+ QL  +GVKIEEED
Sbjct: 84  IWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEED 143

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           KA+LLL S+P SYD+L T + + K T
Sbjct: 144 KAILLLNSLPSSYDNLATTILHGKTT 169


>ref|XP_008807393.1| PREDICTED: uncharacterized protein LOC103719778 [Phoenix
           dactylifera]
          Length = 510

 Score =  105 bits (263), Expect = 5e-24
 Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTPE- 178
           VKDLLVQQ +   L  +  K+  ++   W  L+    STIR+C+ D+V  +   ++T + 
Sbjct: 353 VKDLLVQQKIYKVLVRERPKMISLE--DWKELEEIAFSTIRICLTDHVPPEICSETTAKG 410

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW++LEN Y+GK+++             MPEG  L+ H+ +F+ +  ++  + VKIEEED
Sbjct: 411 LWERLENTYMGKSMTNKLWLKKQLYSLRMPEGGYLISHIQKFNQVCSKVMSLDVKIEEED 470

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
             LLLL S+P SYD L+T L Y K+T
Sbjct: 471 GTLLLLCSLPGSYDGLITTLVYGKET 496


>ref|XP_008796700.1| PREDICTED: uncharacterized protein LOC103712082 [Phoenix
           dactylifera]
          Length = 2199

 Score =  105 bits (263), Expect = 7e-24
 Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           VKDLL+QQ +   L  K  K   ++   W  L+    STIR+C+AD V+ +   ++T  E
Sbjct: 407 VKDLLIQQRIYKVLVKKRPKKISIE--DWEELEEIAFSTIRMCLADQVLPEICLETTAKE 464

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW++LEN Y+GK+++             MPEG +L+ H+ +F+ +  ++  + V+I EED
Sbjct: 465 LWERLENTYMGKSMTNKLWLKKQLYSLRMPEGGDLISHIQKFNQVCSEIMSLDVQIVEED 524

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
             LLLL S+P SYD L+T L Y K+T
Sbjct: 525 MTLLLLYSLPGSYDGLITTLVYRKET 550


>ref|XP_010277636.1| PREDICTED: uncharacterized protein LOC104612027 [Nelumbo nucifera]
          Length = 276

 Score =  101 bits (251), Expect = 2e-23
 Identities = 50/92 (54%), Positives = 65/92 (70%)
 Frame = +2

Query: 161 EDSTPELWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGV 340
           +DS P+LW KL+ LYLGK+L+T            M EG NLM+H+N F+ ++DQL KV V
Sbjct: 3   KDSAPKLWDKLKKLYLGKSLTTKLYLKQQLYGLKMEEGGNLMEHLNMFNSILDQLEKVDV 62

Query: 341 KIEEEDKALLLLASIPDSYDSLVTMLQYEKDT 436
           K+EEE+KALLLL  + DSY++LVT L Y KDT
Sbjct: 63  KVEEENKALLLLILLHDSYENLVTTLLYGKDT 94


>gb|KYP53542.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 197

 Score = 99.4 bits (246), Expect = 2e-23
 Identities = 57/140 (40%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTPE- 178
           V+D+LVQQGL  AL+ +  K +++   +W+ ++ + VSTIRL +   +  +  +++TP+ 
Sbjct: 26  VQDILVQQGLDQALEDE--KPSNINEREWSQIQKKAVSTIRLALTPEIKCNVLKETTPKA 83

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW+KLE++Y  K+L+             M  G+NL DH+N F+ LV QL  V  KI  E+
Sbjct: 84  LWEKLESIYASKSLTNRLCLKMELYQLKMEIGENLHDHINHFNQLVCQLLNVNEKIYNEE 143

Query: 359 KALLLLASIPDSYDSLVTML 418
           +A+LLLAS+P SY SLV  L
Sbjct: 144 QAMLLLASLPMSYKSLVQTL 163


>gb|ABA98861.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 425

 Score =  102 bits (254), Expect = 5e-23
 Identities = 55/146 (37%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           +KDLL QQG++ AL+  E     M   +W  +K++  +TIRL ++D+V+    ++ TP E
Sbjct: 27  LKDLLAQQGISKALE--ETMPEKMDAGKWEEMKAQAAATIRLSLSDSVMYPVMDEKTPKE 84

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           +W KL +LY+ K+L++            M E  +L  H++ F+ LV  L K+ VK+++ED
Sbjct: 85  IWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDED 144

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
            A++LL S+P SY+ +VT L + KDT
Sbjct: 145 MAIILLCSLPPSYEHVVTTLMHGKDT 170


>gb|ABA96825.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 424

 Score =  102 bits (253), Expect = 7e-23
 Identities = 55/146 (37%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           +KDLL QQG++ AL+  E     M   +W  +K++  +TIRL ++D+V+    ++ T  E
Sbjct: 27  LKDLLAQQGISKALE--ETMPEKMDAGKWEEMKAQAAATIRLSLSDSVMYQVMDEKTSKE 84

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           +W KL +LY+ K+L++            M E  +L  H++ F+ LV  L K+ VK+++ED
Sbjct: 85  IWVKLTSLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDED 144

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           KA++LL S+P SY+ +VT+L + KDT
Sbjct: 145 KAIILLCSLPPSYEHVVTILTHGKDT 170


>ref|XP_006442418.1| hypothetical protein CICLE_v10023471mg, partial [Citrus clementina]
           gi|557544680|gb|ESR55658.1| hypothetical protein
           CICLE_v10023471mg, partial [Citrus clementina]
          Length = 185

 Score = 97.4 bits (241), Expect = 8e-23
 Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
 Frame = +2

Query: 11  LLVQQGLAMALKGKEGKLTD-------MKGAQWANLKSRCVSTIRLCIADNVVDDDSEDS 169
           +L+Q GL  AL+GK    ++       +    W  L  R  S IRLC+A NV+ +     
Sbjct: 1   VLIQFGLHKALRGKPSPASNSGSGKASISDEDWEELDDRAASAIRLCLAKNVLANVGNIP 60

Query: 170 TP-ELWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKI 346
           T  ELW+KLE LY  K++S             M EG  + DH++  +G+V +L  +GVKI
Sbjct: 61  TAKELWEKLEKLYQTKSISNRLYLKEQFHTLRMAEGTKISDHLSVLNGIVSELEAIGVKI 120

Query: 347 EEEDKALLLLASIPDSYDSLVTMLQYEKD 433
           E++DKAL LL S+P SY  ++  L Y K+
Sbjct: 121 EDDDKALRLLWSLPTSYKHMLPTLMYGKE 149


>ref|XP_006405150.1| hypothetical protein EUTSA_v10000703mg, partial [Eutrema
           salsugineum] gi|557106278|gb|ESQ46603.1| hypothetical
           protein EUTSA_v10000703mg, partial [Eutrema salsugineum]
          Length = 162

 Score = 94.4 bits (233), Expect = 7e-22
 Identities = 52/145 (35%), Positives = 84/145 (57%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTPEL 181
           VKDLL QQG+  AL  K  K   +K   W +++ + VSTIR C++D++ +          
Sbjct: 27  VKDLLTQQGMKKALLEK--KPDKIKQDDWDDMQDQAVSTIRFCLSDDITN---------- 74

Query: 182 WKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEEDK 361
             +LE +Y+ K+LS+            M E  +L+ H+N F+ ++  L +V +KIE+EDK
Sbjct: 75  --QLEKMYMSKSLSSKLYLKQKLFGLKMVESGDLIAHINNFNQIIGDLTRVDMKIEDEDK 132

Query: 362 ALLLLASIPDSYDSLVTMLQYEKDT 436
           A++LL S+P  Y++LVT +  +K T
Sbjct: 133 AMILLCSLPPQYETLVTAIAVDKTT 157


>gb|KUM46798.1| hypothetical protein ABT39_MTgene6253 (mitochondrion) [Picea
           glauca]
          Length = 116

 Score = 92.8 bits (229), Expect = 8e-22
 Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
 Frame = +2

Query: 71  MKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTPE-LWKKLENLYLGKNLSTXXXXXXX 247
           M    W  +  + VS+IR+C+ADN + +   + T   LW KLE+LY  K+L         
Sbjct: 1   MSNEDWEEMDMKAVSSIRMCLADNFIFNVRGEKTASGLWAKLESLYQSKSLLNRILLKNR 60

Query: 248 XXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEEDKALLLLASIPDSYDSLVT 412
                M EG  + +H+N F+ ++ QL  +GVK+++EDKA+ LL ++PDSYD+LVT
Sbjct: 61  LYSLKMKEGAKVSEHLNTFNDILSQLESIGVKMDDEDKAVTLLCTLPDSYDNLVT 115


>gb|AAO13467.1| Putative retrovirus-related pol polyprotein [Oryza sativa Japonica
           Group] gi|108706491|gb|ABF94286.1| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 556

 Score = 98.6 bits (244), Expect = 2e-21
 Identities = 53/146 (36%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           +KDLL QQG++ AL+    +  D+   +W  +K++  + IRL ++D V+    ++ TP E
Sbjct: 158 LKDLLAQQGISKALEETMPEKMDV--GKWVEMKAQATAIIRLSLSDFVMYQVMDEKTPKE 215

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           +W KL +LY+ K+L++            M E  +L  H++ F+ LV  L K+ VK+++ED
Sbjct: 216 IWDKLASLYMSKSLTSKLYLKQQLYGLQMQEESDLRKHVDVFNQLVVDLSKLDVKLDDED 275

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           KA++LL S+P S++ +VT L + KDT
Sbjct: 276 KAIILLCSLPPSFEHVVTTLTHGKDT 301


>gb|KYP58145.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 262

 Score = 95.5 bits (236), Expect = 2e-21
 Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTPE- 178
           +K +L Q GL  AL GK  K  +M   QW  L  + +S I+LC++  V+ + + ++T   
Sbjct: 1   MKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAA 60

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW KLE+LY+ K+L+             M EG  +  H+N+F+ ++  L  + +KI++ED
Sbjct: 61  LWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDED 120

Query: 359 KALLLLASIPDSYDSLVTMLQYEKD 433
           KA+LL+ S+P +Y     ++ Y  +
Sbjct: 121 KAVLLIVSLPSTYKHFKEIMLYSNN 145


>gb|KYP77941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 270

 Score = 94.7 bits (234), Expect = 5e-21
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNV-VDDDSEDSTPE 178
           ++D LVQQGL +AL+  E K +++K + W+ ++ + VSTIRL +A  + V    E S  +
Sbjct: 24  IQDYLVQQGLDLALQD-EKKPSEIKESDWSTIQKKAVSTIRLALAPQIKVTVLKETSPKK 82

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW  LE+ +  K L+             M EG N+ DH+N+F+ +V +L   G  I++E+
Sbjct: 83  LWDTLESKFASKTLTNRLMMKMDLYSLKMEEGGNVTDHINKFNEMVSRLLNAGETIKDEE 142

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           +ALLLLAS+P S+  LV  +   K T
Sbjct: 143 QALLLLASLPKSFKPLVQSMLAGKST 168


>gb|KYP62517.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 267

 Score = 94.4 bits (233), Expect = 7e-21
 Identities = 55/146 (37%), Positives = 86/146 (58%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           ++D LVQQGL  AL+  E K  +MK ++W+ ++ + VSTIRL +A  +     ++++P +
Sbjct: 24  IQDYLVQQGLDCALE--EEKPREMKDSEWSTIQKKAVSTIRLALAPQIKVTVLKETSPRK 81

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW  LE+ +    L+             M +  N+ DH+N+F+ LV +L   G  I++E+
Sbjct: 82  LWNLLESKFASTTLTNRLMMKMDLYSLKMEDEGNVFDHINKFNELVSRLMNAGETIKDEE 141

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           +ALLLLAS+P SY SLV  L   K T
Sbjct: 142 QALLLLASLPKSYKSLVQSLLAGKST 167


>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 415

 Score = 95.9 bits (237), Expect = 1e-20
 Identities = 52/146 (35%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           +KDLL QQG++ AL+    +  D    +W  +K++  +TIRL ++D+V+    ++ +P E
Sbjct: 27  LKDLLAQQGISKALQETMPEKIDAD--KWNEMKAQAAATIRLSLSDSVMYQVMDEKSPKE 84

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           +W KL +L++ K+L++            + E  +L  H++ F+ LV  L K+ VK+++ED
Sbjct: 85  IWDKLASLHMSKSLTSKLYLKQQLYGLQVQEESDLRKHVDVFNQLVVDLSKLDVKLDDED 144

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           KA++LL S+P SY+ +VT L + KDT
Sbjct: 145 KAIILLCSLPLSYEHVVTTLTHGKDT 170


>gb|KYP36341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan] gi|1012341223|gb|KYP52429.1|
           Retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Cajanus cajan]
          Length = 267

 Score = 93.2 bits (230), Expect = 2e-20
 Identities = 54/146 (36%), Positives = 85/146 (58%), Gaps = 1/146 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTP-E 178
           ++D LVQQGL  AL+  E K  +MK ++W+ ++ + VSTIRL +A  +     ++++P +
Sbjct: 24  IQDYLVQQGLDCALE--EEKPCEMKDSEWSTIQKKAVSTIRLALAPQIKVTVLKETSPRK 81

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW  LE  +    L+             M +  N+ DH+N+F+ LV +L   G  I++E+
Sbjct: 82  LWNLLEGKFASTTLTNRLMMKMDLYSLKMEDEGNVFDHINKFNELVSRLMNAGETIKDEE 141

Query: 359 KALLLLASIPDSYDSLVTMLQYEKDT 436
           +ALL+LAS+P SY SLV  L   K T
Sbjct: 142 QALLILASLPKSYKSLVQSLLAGKST 167


>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 690

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 48/145 (33%), Positives = 82/145 (56%), Gaps = 1/145 (0%)
 Frame = +2

Query: 2   VKDLLVQQGLAMALKGKEGKLTDMKGAQWANLKSRCVSTIRLCIADNVVDDDSEDSTPE- 178
           +K +L Q GL  AL GK  K  +M   QW  L  + +S I+LC++  V+ + + ++T   
Sbjct: 25  MKAVLTQNGLKKALDGKAKKPVNMTDEQWDELDEKALSAIQLCLSKEVLREVANETTAAA 84

Query: 179 LWKKLENLYLGKNLSTXXXXXXXXXXXXMPEGDNLMDHMNQFHGLVDQLGKVGVKIEEED 358
           LW KLE+LY+ K+L+             M EG  +  H+N+F+ ++  L  + +KI++ED
Sbjct: 85  LWLKLESLYMTKSLANKLRLKERLYTIRMVEGTPIQSHLNEFNSIIMDLENIEIKIDDED 144

Query: 359 KALLLLASIPDSYDSLVTMLQYEKD 433
           KA+LL+ S+P +Y     ++ Y  +
Sbjct: 145 KAVLLIVSLPSTYKHFKEIMLYSNN 169