BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00009356
         (5483 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010039376.1| PREDICTED: uncharacterized protein LOC104428...   393   e-177
ref|XP_010445303.1| PREDICTED: uncharacterized protein LOC104727...   335   e-140
ref|XP_013645686.1| PREDICTED: uncharacterized protein LOC106350...   352   e-132
ref|XP_012075485.1| PREDICTED: uncharacterized protein LOC105636...   300   e-128
ref|XP_012083900.1| PREDICTED: uncharacterized protein LOC105643...   289   e-124
ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein A...   421   e-124
ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein A...   423   e-124
ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein A...   423   e-123
ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein A...   417   e-123
ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein A...   414   e-121
ref|XP_008351830.1| PREDICTED: putative ribonuclease H protein A...   419   e-120
ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein A...   411   e-120
emb|CDP14470.1| unnamed protein product [Coffea canephora]            404   e-120
ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein A...   413   e-119
ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454...   420   e-119
ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein A...   407   e-119
ref|XP_008345353.1| PREDICTED: putative ribonuclease H protein A...   408   e-118
ref|XP_008367519.1| PREDICTED: putative ribonuclease H protein A...   404   e-118
ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein A...   405   e-117
ref|XP_015965201.1| PREDICTED: uncharacterized protein LOC107488...   242   e-117

>ref|XP_010039376.1| PREDICTED: uncharacterized protein LOC104428079 [Eucalyptus grandis]
          Length = 1343

 Score =  393 bits (1010), Expect(2) = e-177
 Identities = 206/566 (36%), Positives = 318/566 (56%), Gaps = 1/566 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG+   +  P+RGIRQGDPLSPYLFI+++  LS ++H A    S +G+K  R  PT+TH
Sbjct: 585  VNGEQTEFFRPTRGIRQGDPLSPYLFIVMANVLSWMMHNALADGSIKGIKPNRYCPTLTH 644

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADD+I F   +  + Q + AIL++YC A+GQ +NL KS  +FSK     ++ ++   
Sbjct: 645  LLFADDAIFFMDGSVRECQSLAAILNQYCYATGQAINLNKSGMFFSKGCPQDLKRNMTHE 704

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            +     +   KYLGLP   G++K+++F+++   V  ++ GW+  +LS AGK++L+K V+ 
Sbjct: 705  MRVPIMDRTGKYLGLPSDWGKTKKDMFAWILARVNMKLAGWKEKYLSKAGKEILVKTVVQ 764

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            ALP Y MS FK+P++IC  I +    FWW+   +    +HW +WE +   K  GGLGF D
Sbjct: 765  ALPQYAMSIFKIPVSICKAIEKRIAAFWWRQ-NDAKKSMHWKNWETLKSRKDRGGLGFKD 823

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            +  FN A+L KQ WR+   P+ L S+LLK  YFP+G L      P  SW W+S L+ +  
Sbjct: 824  LISFNVAMLGKQAWRLSQSPSALWSQLLKGLYFPQGDLWKANRGPRPSWGWQSVLRGRDA 883

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLED-FWVRDLMNQDGVSWNKEL 4232
            +   L++ VGDGKSI +    W+      + I  G  +  D   V DL++Q+   WN  L
Sbjct: 884  ILPDLKWTVGDGKSIHIRQDHWLS-----QGILGGPENRNDPHLVADLIDQERKEWNVPL 938

Query: 4233 VFEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLKLSQKDEPESS 4412
            + + F     N IL +PI      DK++W     G Y+VKS Y  +  + L Q+    SS
Sbjct: 939  LNQLFDQKIVNEILTLPIVHQQKDDKLIWTGNHSGQYTVKSGYNMINDVSLPQECNRASS 998

Query: 4413 HGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQEET 4592
               +  + LWTK W++ +  KL+ F+W     A+PT+  L +R +  D +C +C    ET
Sbjct: 999  -SYQPPRSLWTKLWHMSIPPKLRIFLWSLCQDALPTKEKLHQRKILPDPLCPLCSKYPET 1057

Query: 4593 MEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCSIKENSYAEDRIQLSVYLLW 4772
            +EH+F HC + +K W    +  ++ +        W  +   +K  + A D  +L V +LW
Sbjct: 1058 VEHIFLHCQQVKKIWSDPRLNISHVTSSATRMDKWVAEYLLVK--TQASDP-ELIVEVLW 1114

Query: 4773 WLWKTRNLWIFQKCVTNEKDLVDGAI 4850
             +WK RN +IF+K     + L+D A+
Sbjct: 1115 QIWKNRNNFIFRKTHGQPQALIDTAL 1140



 Score =  261 bits (667), Expect(2) = e-177
 Identities = 152/486 (31%), Positives = 251/486 (51%), Gaps = 1/486 (0%)
 Frame = +2

Query: 1646 CRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKKSFITTVCRKLKLDDRWISVEPNGYRG 1825
            C GLG P T  +L+ ++ L  P +VFL ETK K+  +                +P G  G
Sbjct: 119  CMGLGNPLTFQELRALVALERPTVVFLMETKNKEVIVE---------------KPTGLAG 163

Query: 1826 GLLVFWSANVSVCQVFCSQFCIEVELEMLGSVGKFWVIFVYASTDASLRKEQWVFLEQAK 2005
            GL + W+  + V     S + I++E +   S     + F++A T    R + W  L    
Sbjct: 164  GLALLWNEEIQVKVRGSSNYFIDMECDDPRSGKLMRITFLHAPTSYPDRLQLWQQLRDFH 223

Query: 2006 SKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAFRGYPYTWSNN 2185
            +     W+  GDFND     +K+G R      +  FRD ++   + +I  +G  +TWSNN
Sbjct: 224  TDNSLPWLCMGDFNDTLYTWEKEGKRETDYYRMAAFRDMLNDCSLMEIDSKGCMFTWSNN 283

Query: 2186 REGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAENGVGNKKRFAF 2365
            R+G + +++R+DR   + +W + FP A +  +    SDHS LLL++        K+ F F
Sbjct: 284  RDGADLVKKRLDRGVCTMEWRITFPSAEIYALPAVGSDHSPLLLSLYPGTSKRTKE-FRF 342

Query: 2366 NKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNNKTNAAKAIELCK 2545
               WL+     ++V+ AW K    +    + QK+      L  WSKN  +NA+  I+  K
Sbjct: 343  ESYWLDEEDCRDIVKKAWAKPYLQSS--SLPQKLHQVTEELLVWSKNKFSNASIQIKELK 400

Query: 2546 NKLNLLRQEGGHRNWK-EWNVVKTALSKAYSEEEKFWGQKARISWLQEGDRNSKFFHACT 2722
            ++L  +       + K E   +K  +   + +EE +WG ++RI+WL+ GD+N+KFFHA T
Sbjct: 401  HRLTEITNGQPTTSTKAEIQFIKAKIDHLWRQEEMYWGLRSRITWLKWGDKNTKFFHATT 460

Query: 2723 IQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNHLFKSSVPQDDVHILEGMPKSISAE 2902
            IQRR++N +  L   +E+    P AI+  +T ++  L++S+ P++   IL   PK ++ E
Sbjct: 461  IQRRQQNRLTMLKTDEENWIRDPTAIKQHVTAYFRALYQSAGPRNLQPILNHCPKVVTEE 520

Query: 2903 VNKDLTRQVDNMEIKNALFELHPTKAPGLDGMTPIFFQHFWPIISDHLCNAVKNFFSQSK 3082
            +N+ L   +   E+K A+F+L   KAPG DG++  F+Q+FW  I   + N V+ FF  + 
Sbjct: 521  INQILMDDITEEEVKEAVFQLGSLKAPGPDGLSGQFYQNFWEEIKSDVMNMVQQFFQSAS 580

Query: 3083 MLKSVN 3100
            +   VN
Sbjct: 581  LNVKVN 586


>ref|XP_010445303.1| PREDICTED: uncharacterized protein LOC104727950 [Camelina sativa]
          Length = 867

 Score =  335 bits (858), Expect(2) = e-140
 Identities = 177/462 (38%), Positives = 257/462 (55%), Gaps = 1/462 (0%)
 Frame = +3

Query: 3246 EALSNLLHQAQMQQSYQGLKICRGSPTVTHLFFADDSILFCKATTNQAQMVKAILDRYCK 3425
            E L   + +A+ ++   G+ I  GSPTV+HL F DDS+ FCKAT  + + V  I+  Y +
Sbjct: 361  EVLIANIKKAEREKKLTGITIACGSPTVSHLLFTDDSLFFCKATAQECRTVMDIIGTYGR 420

Query: 3426 ASGQMVNLEKSSAYFSKNTSVHIQNDICAILNGISAEP-CAKYLGLPMVIGRSKREVFSY 3602
            ASGQ VNL KSS  F K  +  I++ +  ++ GIS E     Y G+P  +  SK +VFSY
Sbjct: 421  ASGQEVNLAKSSIMFGKKVTPDIRSQLKLVI-GISQEGGMGSYFGIPENLQGSKTKVFSY 479

Query: 3603 VTDCVRKRINGWQNNFLSAAGKDVLIKAVINALPNYVMSCFKLPLNICNEIRQITTKFWW 3782
            V D +  R+NGW    LS  GK+++IK+V  ALP +VMSC+KLP  + +++    + FWW
Sbjct: 480  VKDRLDDRVNGWSAKCLSKGGKEIMIKSVALALPTHVMSCYKLPQELTSKLTSAISTFWW 539

Query: 3783 KNCKNQAGILHWVSWEKIAKDKKLGGLGFHDISLFNDALLAKQLWRIITQPNLLMSKLLK 3962
            K+     G +HWV+W+K+ KDK  GGLGF  +  FN+A+LAKQ WR+I  P  LM+K++K
Sbjct: 540  KSNDKARG-MHWVAWDKLCKDKAEGGLGFRALEQFNEAMLAKQFWRLIQYPTSLMAKVMK 598

Query: 3963 ARYFPKGRLLSVEPKPTDSWLWKSWLKAKYTLSLGLRYEVGDGKSIRVCNSPWIPSMPSF 4142
            +RYF     L  +     S+ W+S    K  +  G R+ VG G SI V   PWIP +   
Sbjct: 599  SRYFRNKHPLMAKKPYNPSFAWRSIYSIKGLVEQGARWAVGSGNSISVWRDPWIPDIRPR 658

Query: 4143 KPIPSGKVDLEDFWVRDLMNQDGVSWNKELVFEAFCLNDANTILKIPISPTGDRDKIVWH 4322
                 G++ L    V  L+N +  +W+   + E F   D   I  +P+S T   D+++WH
Sbjct: 659  PANGRGRLWLPSLMVNHLINPETKNWHLPTLEEFFDPGDIQLIQSMPVSRTHQPDRLIWH 718

Query: 4323 LEKKGLYSVKSAYKQLMHLKLSQKDEPESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCL 4502
              K G YSVKS Y+    L +  +  P  +        L  + W L V  K+QHF W+  
Sbjct: 719  YTKSGKYSVKSGYRLARELIMDVEYGPTCT-------ALRAQSWKLDVPSKIQHFFWQIG 771

Query: 4503 NKAIPTRVHLSRRGVQLDTICAMCGLQEETMEHLFFHCPRAQ 4628
            +  +P    L+ RGV+ DT+C  C    ET+ H  F CPR++
Sbjct: 772  SGTLPVLERLAHRGVRCDTVCKRCDSAVETINHALFECPRSR 813



 Score =  197 bits (500), Expect(2) = e-140
 Identities = 114/349 (32%), Positives = 184/349 (52%), Gaps = 6/349 (1%)
 Frame = +2

Query: 2129 ILEMGDIAFRGY--PYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDH 2302
            I ++G + F  Y    +W  N+  ++ I  R+DR  G+ DW   +P++ V ++ M  SDH
Sbjct: 2    IKDIGMLEFPCYGDQLSWRGNQCNNQVIRCRLDRALGNEDWHALYPNSKVEYLEMIGSDH 61

Query: 2303 SLLLLNVLAENGVGNKKR-FAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQ---QKIK 2470
            S +L   L    V  ++R F F+K WL   G+   VE  WN+    T  F+I     K++
Sbjct: 62   SPILATCLT--AVWRRQRQFRFDKRWLGKEGLAGAVESGWNR----TRNFRIPGFVDKLR 115

Query: 2471 YCRMALTHWSKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKF 2650
             CR +++ W KNN +     I   K  L+  + +    + ++   ++  L +AY +EE +
Sbjct: 116  NCRNSISWWRKNNVSTGPSIISSLKTALHDAKMDDSV-SLEDIRGIERKLKEAYRDEEIY 174

Query: 2651 WGQKARISWLQEGDRNSKFFHACTIQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNH 2830
            W QK+R  WL+ GD+N+ +FHA T QRR RN I  L+ ++    +S + +E   T ++  
Sbjct: 175  WQQKSRKFWLRVGDKNTSYFHASTKQRRVRNRIIGLFGANNVWDESASGMEHIATTYFED 234

Query: 2831 LFKSSVPQDDVHILEGMPKSISAEVNKDLTRQVDNMEIKNALFELHPTKAPGLDGMTPIF 3010
            LFK S       +L+ +   ++A +N+DL R +   E++ ALF +HP K PG DGMT +F
Sbjct: 235  LFKKSDGGGISEMLQAIDPIVTAGMNRDLIRDISEREVRQALFAMHPEKTPGPDGMTALF 294

Query: 3011 FQHFWPIISDHLCNAVKNFFSQSKMLKSVNHTLITLIPKIRNPTSISHY 3157
            FQ FW  +   L   +K FF        +N   I LIPK+  P  ++ +
Sbjct: 295  FQRFWSSLKGDLVALIKEFFRTGSFDPLLNENNICLIPKVDRPERMAEF 343


>ref|XP_013645686.1| PREDICTED: uncharacterized protein LOC106350330 [Brassica napus]
          Length = 1126

 Score =  352 bits (904), Expect(2) = e-132
 Identities = 202/591 (34%), Positives = 310/591 (52%), Gaps = 4/591 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   G VTPSRGIRQGDPLSPY+FI+ SE LS L ++AQ   + +G+++ RG P + H
Sbjct: 433  INGSPRGRVTPSRGIRQGDPLSPYIFILCSEVLSGLCNKAQEDGTLKGVRV-RGCPRLNH 491

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADD++ F +A+    + +  +L RY +ASGQ +N EKSS  FS++  V ++  +   
Sbjct: 492  LLFADDTMFFLRASKESGEALCRLLKRYEEASGQSINTEKSSINFSRHAPVALKMAVKDA 551

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L+        KYLGLP + GR KR++FS + D ++++  GW N FLS AGK  ++ +V++
Sbjct: 552  LSIQKEGGIGKYLGLPELFGRKKRDLFSSLVDRIKQKACGWSNRFLSTAGKMTMLTSVLS 611

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
             +P++ MSCF+LP+++C  I+   T+FWW         + W++W K+ + K+ GGL F D
Sbjct: 612  PIPSHAMSCFQLPISLCKRIQSALTRFWWDTNMGDKK-MAWIAWSKLVQPKESGGLNFRD 670

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN+A LAK  WR+I +P+ L+ ++L  +Y      L    K   S  W+  L  +  
Sbjct: 671  IQSFNEAFLAKLSWRLINRPDSLLGRVLFGKYCNSESFLECSEKTAISHGWRGILIGRDI 730

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            +     +EVG+G SI +   PW+      +P+     D     V DLM  D   W+ +++
Sbjct: 731  IINSAGWEVGNGSSINIWEKPWLSCSTQLRPMGPPPRDFSQLTVSDLMLPDRNEWDIDMI 790

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLKLSQKDEPESSH 4415
                   +   IL I  S TG  DK+ W     G YS K+ YK ++  + S +D      
Sbjct: 791  QRVLPFEE-QRILAIKPSLTGAPDKLSWLSTDTGDYSTKTGYKAVLSSR-SVEDAGSIED 848

Query: 4416 GTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQEETM 4595
            G+   K+     W L     ++ FIW+ L+ A+P    L  RG+  D  C  C +  E++
Sbjct: 849  GSFDWKK---SVWKLQTTPMIKLFIWKALHGALPVSEALKARGINTDGQCKRCNM-PESI 904

Query: 4596 EHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCSIKE-NSYAEDRIQLSVYLLW 4772
            +HL FHC  A++ W+ APV  +     +   +  W   CS K           L+ ++ W
Sbjct: 905  DHLLFHCSYARQVWESAPVSPSIEYSGSIDLRSNWSSFCSRKSLPPTGVSTGALAPWITW 964

Query: 4773 WLWKTRNLWIFQ-KCVTNEK--DLVDGAIWEWQEMLSISSSGHIGRNKQVI 4916
             LW  RN  +F+ K +T E+   +      EW     IS    +   KQ I
Sbjct: 965  QLWLARNKLVFEGKIITVEETISIASACAKEW-----ISCQNQVKNAKQAI 1010



 Score =  152 bits (383), Expect(2) = e-132
 Identities = 100/343 (29%), Positives = 161/343 (46%), Gaps = 2/343 (0%)
 Frame = +2

Query: 2135 EMGDIAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLL 2314
            ++ D+ + G   +W   R GD+ +  R+DR   + DW   FP A   ++A   SDH  LL
Sbjct: 67   DLFDLQYSGDFLSWRGKR-GDDLVRCRLDRAVANSDWAELFPTARSLYLAFEGSDHKPLL 125

Query: 2315 LNVLAENGVGNKKR--FAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMAL 2488
                 E     K+R  F +++    +P + ++V   W      T    +  +I   R  L
Sbjct: 126  SCFEPEK---RKRRGLFRYDRRLKNNPEVKDLVAKTWKSGSFRT----VNDRISAMRSVL 178

Query: 2489 THWSKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKAR 2668
              WS+ +  N+   IE  K +L+    +  +       V K  L +AY+ EE +W Q++R
Sbjct: 179  IGWSRQHALNSRARIEEKKYQLDQALTDPVNDTELITKVTKE-LDEAYAAEESYWQQRSR 237

Query: 2669 ISWLQEGDRNSKFFHACTIQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNHLFKSSV 2848
              WL  GDRN+ +FHA +  R++ N    +  S+         I   I  ++  LF S  
Sbjct: 238  QLWLSLGDRNTGYFHAVSKNRKRVNAFSVIENSEGEPVYQEDQIGRVIVDYFQRLFTSMG 297

Query: 2849 PQDDVHILEGMPKSISAEVNKDLTRQVDNMEIKNALFELHPTKAPGLDGMTPIFFQHFWP 3028
               +  +   +   I+AE N+ L R    +EIK A+F +H  KAPG DG +  FF   W 
Sbjct: 298  GDREETVNYALSPMITAETNEGLIRIPSALEIKEAVFSVHADKAPGPDGFSASFFHTNWE 357

Query: 3029 IISDHLCNAVKNFFSQSKMLKSVNHTLITLIPKIRNPTSISHY 3157
             I   +   ++ FF   K+   +N T I LIPKI++P +++ Y
Sbjct: 358  NIGAEIVKEIQEFFVTDKLPDKINETHIRLIPKIQSPKTVAEY 400


>ref|XP_012075485.1| PREDICTED: uncharacterized protein LOC105636752 [Jatropha curcas]
          Length = 1028

 Score =  300 bits (768), Expect(2) = e-128
 Identities = 157/380 (41%), Positives = 226/380 (59%), Gaps = 1/380 (0%)
 Frame = +3

Query: 3162 GQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTHLF 3341
            G   G +  SRG+RQGDPLSPYLFI+ +E LS ++  A     + G  I RG+P + HLF
Sbjct: 376  GNHLGPIVLSRGVRQGDPLSPYLFILCAEGLSRMIQSAVNAGLWHGCSIVRGAPFIDHLF 435

Query: 3342 FADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAILN 3521
            FADDS+L  KA T++A MV+ I++ Y +ASGQ++NL KSS  FSKN S  ++  +C ++ 
Sbjct: 436  FADDSLLVFKADTSEAAMVRGIINGYAQASGQLINLSKSSLCFSKNVSELVRLQVCGVM- 494

Query: 3522 GISAEP-CAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVINA 3698
            G+   P    YLGLP  IG  KREVF ++ D V  ++N  + + LS AGK++L+K V+ A
Sbjct: 495  GVEENPDLGYYLGLPTRIGLIKREVFGFIKDRVWNKLNSLKWHCLSRAGKEILLKTVLLA 554

Query: 3699 LPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHDI 3878
            LPNYVM+ F LP ++C EI+ I   FWW     Q   ++W+SWE++ + K LGGLGF  +
Sbjct: 555  LPNYVMNFFLLPKSLCKEIQSIICSFWWGRDMQQRRGINWISWERMCRPKFLGGLGFRRL 614

Query: 3879 SLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYTL 4058
              FN A++ KQ WRI   P  +++ LLKA+YFP    L        S+LW+S  +++  +
Sbjct: 615  YEFNLAMVGKQAWRIFMNPTSVVASLLKAKYFPLTNFLESSLGNRPSFLWRSLWESQRVV 674

Query: 4059 SLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELVF 4238
              G    VG G +I +    W+PS+ S K +    +     WV DL+  +   WN E++ 
Sbjct: 675  CAGACLRVGSGSTISIWQDAWLPSVSSMKIVTPRPIATGLLWVSDLI--ENHRWNMEVIS 732

Query: 4239 EAFCLNDANTILKIPISPTG 4298
              F   DA  I+ IP+   G
Sbjct: 733  NNFVPQDAAEIISIPLRRCG 752



 Score =  190 bits (483), Expect(2) = e-128
 Identities = 107/360 (29%), Positives = 179/360 (49%)
 Frame = +2

Query: 2069 KKGGRTRSQVSLTDFRDFIHILEMGDIAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWI 2248
            +KGGR + Q  +  FRD I    + D    GYP+TW + RE +  IEE++DR+  S +W+
Sbjct: 3    RKGGRRQPQSLINGFRDSILDAGLTDFPMGGYPFTWEHGRESNVLIEEKLDRILASANWV 62

Query: 2249 LKFPHALVTHVAMSSSDHSLLLLNVLAENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQ 2428
              FP A    +  SSSDH  L L V         +RF F  +W+  P    +V  +W   
Sbjct: 63   GLFPLARAHVLDTSSSDHLPLFLEVRTYMTRQVARRFKFENSWVRHPACRQLVHDSW--- 119

Query: 2429 VRGTPMFQIQQKIKYCRMALTHWSKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVV 2608
            V    M  +  ++ +C  AL  W    +      +   +  +N++R      + + +   
Sbjct: 120  VASQDM-DLLDRLAFCSSALDRWGVEQRNFDRNLLADYRRIMNVIRGSRDPADIQSFITA 178

Query: 2609 KTALSKAYSEEEKFWGQKARISWLQEGDRNSKFFHACTIQRRKRNNIDRLYKSDESVCDS 2788
            K       ++ E  W Q+++  WL+EGD+N++FFH     R K+N   +L  ++    + 
Sbjct: 179  KKNFHDLLNDPEIHWKQRSKTFWLKEGDKNTRFFHMAASIRFKKNQFSKLKNAEGVWVED 238

Query: 2789 PAAIETEITGFYNHLFKSSVPQDDVHILEGMPKSISAEVNKDLTRQVDNMEIKNALFELH 2968
             + ++  ITG+++ +F ++V  D   I++ +P  ++ ++N DL       EIK A+F   
Sbjct: 239  DSGLDKLITGYFSDIFTANVG-DVGPIVDHVPVCVTPDMNADLMAPYTTDEIKVAVFSTK 297

Query: 2969 PTKAPGLDGMTPIFFQHFWPIISDHLCNAVKNFFSQSKMLKSVNHTLITLIPKIRNPTSI 3148
            P KAPG+DG  P F+Q++W II   +      + SQ      +N+TL+ LIPK   P S+
Sbjct: 298  PDKAPGMDGFNPAFYQNYWDIIGPSISQVCIQYLSQGVFPSELNNTLLVLIPKKDIPESM 357


>ref|XP_012083900.1| PREDICTED: uncharacterized protein LOC105643399 [Jatropha curcas]
          Length = 1056

 Score =  289 bits (739), Expect(2) = e-124
 Identities = 153/401 (38%), Positives = 227/401 (56%), Gaps = 4/401 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG   G +   RG+RQG PLSPYLFI+ +E LS L +Q++ +   +G ++ R +P ++H
Sbjct: 433  VNGDEVGPIILERGLRQGCPLSPYLFILCAEGLSKLFYQSEREGRLKGCRVSRAAPRLSH 492

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FA DS+ F +A+  QA  +K IL  Y  ASGQ VN +KS  +FS NTS   +  +  +
Sbjct: 493  LLFAHDSLFFFEASRTQALEIKTILVTYEAASGQAVNWQKSGIFFSSNTSEMDKTAVQGV 552

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
               I+     +YLGLP +IGR +R +FS++ D VRK ++GW    LS  GK+VLIKAV  
Sbjct: 553  FGVIAPLNHGRYLGLPSLIGRDRRHIFSFLKDRVRKLVSGWNQKLLSKGGKEVLIKAVAQ 612

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A+P++ MS F LP++I  E++++   +WW       G + W+SWE++   K+ GGLGF  
Sbjct: 613  AIPSFCMSSFLLPVSILTELQRLMNSYWW------GGKMRWLSWERLCVAKEEGGLGFRH 666

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            +  FN ALL K  WR++   N L     K++YFP G  L        S++W+    AK  
Sbjct: 667  LRSFNLALLGKHCWRLLHNTNSLFYSSFKSKYFPSGDFLGTGVGRNPSFVWRGICAAKDA 726

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFK---PIPSGKVDLEDFWVRDLMNQDGV-SWN 4223
            +  G R+ +GDG+S+ V   PW+     F+   PI  G    E   V DL+   G  +WN
Sbjct: 727  ICSGFRWRIGDGQSVNVWTEPWLLRDNQFRVHLPILPG---FEHIRVSDLILAHGARAWN 783

Query: 4224 KELVFEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYS 4346
              L+   F  + A+ I  IP++     D ++WH    G+YS
Sbjct: 784  LPLIHGLFNPSIADIITSIPLATNVQDDILIWHWTDSGIYS 824



 Score =  189 bits (480), Expect(2) = e-124
 Identities = 113/401 (28%), Positives = 193/401 (48%), Gaps = 1/401 (0%)
 Frame = +2

Query: 1958 DASLRKEQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILE 2137
            + S R+  W  L          W++ GDFND+    +KKG        L  F D +    
Sbjct: 3    ERSRRQISWNVLRSLAGLEHLPWLICGDFNDLMFAAEKKGRHPHPPCLLQGFSDTVADCG 62

Query: 2138 MGDIAFRGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLL 2317
            + D+   GYP+TW++ R G   +EER+DR  G+  W   FP+ LV ++  S SDHS LL+
Sbjct: 63   LVDLGMTGYPFTWAHGR-GQRRVEERLDRALGNITWQNHFPNYLVQNLVSSRSDHSPLLI 121

Query: 2318 NVLAENGVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHW 2497
                       +RF F   WL+   +D+VV  +W           +  KIK C   L  W
Sbjct: 122  ITSPRIENRRHQRFRFENIWLDESDVDDVVRESWTSHEG----VDVTGKIKVCGERLQSW 177

Query: 2498 SKNNKTNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISW 2677
             +  K    +  +    +L  LR  G   N +++  V+  L      EE FW Q+A+  W
Sbjct: 178  GRRLKLRFRQDAKKLTVQLENLRISG---NNEQFEAVQRMLDDVLHREEVFWSQRAKSHW 234

Query: 2678 LQEGDRNSKFFHACTIQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNHLFKSSVPQD 2857
            LQ GD NS++FHA   +R+K   I RL  ++         ++  ++ ++ +LF++     
Sbjct: 235  LQSGDINSRYFHATAKKRKKSKQIFRLKDANGEWISDNNLLKGMVSDYFVNLFEAG--DV 292

Query: 2858 DVHILEGMPKSISAEVNKDL-TRQVDNMEIKNALFELHPTKAPGLDGMTPIFFQHFWPII 3034
            D+  + G+   + ++ +  L    +   E+  A+ + H  K+PG+DG+ P F+  FW ++
Sbjct: 293  DLRPVVGLFSPLVSDNDNSLFLGDISVDEVNLAVKQKHADKSPGMDGLNPRFYHRFWDVV 352

Query: 3035 SDHLCNAVKNFFSQSKMLKSVNHTLITLIPKIRNPTSISHY 3157
               +  + +++F+      ++N TLI LIPK+ +P ++  +
Sbjct: 353  GHDVVTSFRDWFNTGVFPNNLNDTLIVLIPKVEDPEAVKDF 393


>ref|XP_008366311.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 812

 Score =  421 bits (1083), Expect = e-124
 Identities = 221/575 (38%), Positives = 329/575 (57%), Gaps = 13/575 (2%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG   G++ P RG+RQGDP+SP+LF+I +E LS +L + + Q    G+++      ++H
Sbjct: 191  LNGSATGFIQPKRGLRQGDPMSPFLFLICAEGLSAVLRKREEQGYLHGIRVTPDGMQISH 250

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADD+++FCKAT  + + +  +L  Y  ASGQ++N EK S YF        +  I + 
Sbjct: 251  LFFADDAVIFCKATEVEVRGILEVLQCYAAASGQIINREKCSLYFGNQCPRQQRRLIESC 310

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
             N +  E   +YLGL    G SK+ VF  V + +  RINGW   FLS AGK+V+IKAV  
Sbjct: 311  TNFVGKETFGRYLGLSADFGASKKAVFEGVREALDGRINGWAEQFLSPAGKEVMIKAVAI 370

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            ALPNY MSCFKLP+N+C E+      FWW+  + + G +HW+SWEK+ + KK+GGLGF D
Sbjct: 371  ALPNYAMSCFKLPVNLCKEMESNIANFWWRGSREKNG-MHWISWEKMKRRKKVGGLGFRD 429

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            +  FN A LAK  WRI+T P  L+SK+LK +YFP+   +  +     +W WK  ++ K  
Sbjct: 430  LLSFNLAYLAKIGWRILTNPLSLLSKILKXKYFPECSFMEAKVGKRSTWGWKGIMQGKKI 489

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  G R+ VGDG SIRV   PW+P   +F+ I S  +D+    V+DL+N    SW  +LV
Sbjct: 490  LERGRRWRVGDGSSIRVKYDPWLPRPHTFRVI-SKHLDM-PVMVKDLINPVTGSWMVDLV 547

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLK----------- 4382
               F   ++N IL IP S  G  D+I+WH    G Y+VK+ Y  +M ++           
Sbjct: 548  KGCFEEEESNIILGIPTSLEGCNDRIIWHHTSNGDYTVKTGYGIVMEMQENCELGRKRTR 607

Query: 4383 -LSQKDEPESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDT 4559
              S++DEP+         + W + W L V  K+++FIWRC   ++  R +L RR ++++T
Sbjct: 608  GCSRRDEPD---------KCWMEIWRLKVPNKMKYFIWRCCTSSLAARGNLHRRRMRVNT 658

Query: 4560 ICAMCGLQEETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCS-IKENSYA 4736
             C +CG  +ET  HLFF C  ++  W   P++ +        F   W  LC+  ++    
Sbjct: 659  TCVLCGDAKETEHHLFFECEFSRVFWFSCPLQLDIKLATRKDFGDCWYSLCNRFRKEKNH 718

Query: 4737 EDRIQLSVYLLWWLWKTRNLWIFQKCVTNEKDLVD 4841
            E  +Q  V+++W +WK RN  +F+    N  + V+
Sbjct: 719  ELILQECVFIMWRIWKCRNDLLFKGTEANPMESVN 753



 Score = 63.9 bits (154), Expect = 2e-06
 Identities = 26/71 (36%), Positives = 45/71 (63%)
 Frame = +2

Query: 2939 EIKNALFELHPTKAPGLDGMTPIFFQHFWPIISDHLCNAVKNFFSQSKMLKSVNHTLITL 3118
            E++ ++F++   KAPG DG T  F+  FW ++   +   V+ F+   KML+ +NHT + L
Sbjct: 4    EVRLSMFQIPTDKAPGPDGFTGSFYHEFWDVVGSDIVAMVQAFWISGKMLRKLNHTHLVL 63

Query: 3119 IPKIRNPTSIS 3151
            IPK+ +P ++S
Sbjct: 64   IPKVSSPRNMS 74


>ref|XP_008355389.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 883

 Score =  423 bits (1088), Expect = e-124
 Identities = 258/754 (34%), Positives = 383/754 (50%), Gaps = 15/754 (1%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   GY+ P RG+RQGDPLSP+LF+I +E  S+L+ +        G +       +TH
Sbjct: 119  INGSPTGYIQPQRGLRQGDPLSPFLFLICTEGFSSLIKKGMECGVLHGYRFTPNGSPLTH 178

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADDS+LF  AT  +AQ V  IL+ Y   SGQ +NL KSS +F  +TS  I+  I   
Sbjct: 179  LFFADDSVLFGNATVEEAQGVVDILNTYAXGSGQEINLSKSSIFFGTSTSKRIKKRIGNT 238

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L     +   KYLGL    G SK+ VF  + D +  R+ GW   FLS AGK+VLIKAV  
Sbjct: 239  LGIPHKDGFGKYLGLQADFGLSKKAVFXEIRDKMEARLAGWSEQFLSQAGKEVLIKAVAM 298

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
             LPN+ MSCFKLP+ +C ++ +    +WW+    + G  HW SW+K+ K K  GGLGF D
Sbjct: 299  XLPNFAMSCFKLPIGVCRDMEKAVRSYWWRGNSQKRG-CHWASWDKLMKQKSAGGLGFKD 357

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN A LAK  WR+I  P  L++ +L+ +Y+P             SW WK   +++  
Sbjct: 358  IQCFNLAFLAKIGWRLIQNPTSLLANVLRDKYYPGKCFKDAGKGRNTSWGWKGIFESRTV 417

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSF--KPIPSGKVDLEDFWVRDLMNQDGVSWNKE 4229
            L  G+R+ VGDG+SI +   PW+P+  +F  KP+     +LE+  VRDL++    SW + 
Sbjct: 418  LQHGVRWRVGDGESINIRKDPWLPTPTTFLAKPLD----NLEEIKVRDLIDPISKSWKEG 473

Query: 4230 LVFEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHL----KLSQKD 4397
            ++ E F   +A TIL IP+S +G  D++VWH    G YSVK+ Y   M+      L +K 
Sbjct: 474  VITEGFNREEARTILSIPLSKSGCLDRLVWHYTVNGDYSVKTGYGVAMNXMENGALGKKG 533

Query: 4398 EPESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCG 4577
               SS   R N   W + W L V  K++ F+W+C NKA+  R +L RR ++++ IC +C 
Sbjct: 534  RGASSM-LRKNNLTWKRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCN 592

Query: 4578 LQEETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLC-SIKENSYAEDRIQL 4754
              +E+  HLFF C  + + W  +P+  N+       F   W  +C S K    AE+ +Q 
Sbjct: 593  TFDESENHLFFQCDFSHRFWFGSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQE 652

Query: 4755 SVYLLWWLWKTRNLWIFQKCVTNEKDLV---DGAIWEWQEMLSIS---SSGHIGRNKQVI 4916
              + LW LWK RN  +F        +++      I+E++E LS+S       I  N +  
Sbjct: 653  VAFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREALSLSLKCEDQLISNNLKTE 712

Query: 4917 XXXXXXXXXXXXXXXXXXXCVA-ISAVIGDGCNNCYGGWIMNENMHNLK-AWSTSRNDNL 5090
                                 A  S+ +  G      GW+  +    L+ A  +  +   
Sbjct: 713  QSPRLHWTKPKFGTIKVNTDAAWCSSSLRTGV-----GWVGRDFAGLLQFAGGSGTSICH 767

Query: 5091 NLVEAMLFGIRLIMISAFESGIKNVTICLEDENLIQRLNNRNTQEWNMTPLIEDIFLLWY 5270
            +   A    IR  ++S+ E+G   V I  +   +I+ L   ++ ++++  ++ DI +L  
Sbjct: 768  SAAAAEACAIRSALVSSIENGCDKVIIESDALGIIKMLRKESSHDYSIECILGDIEILVQ 827

Query: 5271 LFDSCFFSISDRRWIANCNRLALLALDGNSDMNW 5372
               S  FS   R      + +A  AL    D  W
Sbjct: 828  RLTSVTFSFVPRESNHAAHSVARFALQQGGDYVW 861


>ref|XP_008372934.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 961

 Score =  423 bits (1087), Expect = e-123
 Identities = 252/759 (33%), Positives = 371/759 (48%), Gaps = 12/759 (1%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG   GY+ P RG+RQGDPLSPYLF++ +E  S L+ +     S  G+++      ++H
Sbjct: 197  LNGNPTGYIKPQRGLRQGDPLSPYLFLLCTEGFSXLIRKGLENGSLHGIRVSPTGRPISH 256

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADDS+LFC A+   A  V  IL  Y   SGQ +N+ KSS  FS  T   ++ +I  +
Sbjct: 257  LFFADDSVLFCNASVEDAXGVGEILRAYASGSGQEINMTKSSIMFSPKTKKRVKKEIVHV 316

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            LN  S E   KYLGL    G SK+ VF  + + +  R+ GW   FLS AGK++LIKAV  
Sbjct: 317  LNIQSREGFGKYLGLQADFGLSKKAVFGEIRERIESRMVGWAEQFLSQAGKEILIKAVAM 376

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A+PNY MSCFKLP+ +C +I +    +WW+   ++ GI HWV+WEKI   K+ GGLGF D
Sbjct: 377  AMPNYAMSCFKLPIGVCKDIEKAVRNYWWRGSGDRKGI-HWVAWEKIRSQKRNGGLGFKD 435

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN ALLAK  WRI  QP+ L++ +L+ +YFP             SW WK   +A+  
Sbjct: 436  IQCFNLALLAKIGWRITLQPBSLJANVLREKYFPGKTFREASGGRGTSWGWKGIFEARKV 495

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKP-IPSGKVDLEDFWVRDLMNQDGVSWNKEL 4232
            L  G+R+ VGDG  I +   PW P   +FK  +  G   L+   VRDL++     W  ++
Sbjct: 496  LDKGIRWRVGDGNCINIREDPWFPKPSTFKARVXEG---LQAIMVRDLIDPGSREWKTDM 552

Query: 4233 VFEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLKLSQKDEPESS 4412
            V   F   D  +IL IP+S  G  D ++WH  + G Y+V++ Y   + L +   D  +  
Sbjct: 553  VKGGFLEKDVTSILSIPLSRYGMSDXLIWHHXRNGEYTVRTGYGVALGL-MENGDMGKKG 611

Query: 4413 HGTRSN----KQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGL 4580
             G  S+      +W K WNL V  K++ F+W+C N A+  R +L RR +++   C  C  
Sbjct: 612  RGMPSSAPSLSHVWNKIWNLEVPNKMKFFVWKCCNNALAVRRNLKRRXLRVXNFCEGCMQ 671

Query: 4581 QEETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCS-IKENSYAEDRIQLS 4757
             +ET  HLFF C  +   W  +P++ N+   E   F   W   C  +K      + +Q  
Sbjct: 672  PDETENHLFFRCEISHIFWFCSPLQINSLELEGNDFLASWGSFCGRVKGKENEXELMQEF 731

Query: 4758 VYLLWWLWKTRNLWIFQKCVTNEKDLVDGAIWEWQEMLSISSSGHIGRNKQVIXXXXXXX 4937
            V+ LW LWK RN  IF+       D++   +W  + +     +G    N           
Sbjct: 732  VFGLWHLWKNRNDLIFKGVTHQPLDIL--GLW-MRNLDEYREAGLQRTNDDQPTVGLASP 788

Query: 4938 XXXXXXXXXXXXCVAISAVIGDGC----NNCYG-GWIMNENMHNLKAWSTSRNDNLNLVE 5102
                              V  D       +C G GW+  +    L+A   +     +  +
Sbjct: 789  APAGRTGQWKKPGFGTIKVNTDAAWRKETSCAGVGWVARDFAGLLQAAGGTGGRLCHSAD 848

Query: 5103 AM-LFGIRLIMISAFESGIKNVTICLEDENLIQRLNNRNTQEWNMTPLIEDIFLLWYLFD 5279
            A  +  IR  +      G K+V I  + +N+IQ + N  T + ++   + DI  L    +
Sbjct: 849  AAEMLAIRSALDFCVRLGFKSVAIESDAKNIIQMIRNETTLDCSLECTLGDIATLARGLE 908

Query: 5280 SCFFSISDRRWIANCNRLALLALDGNSDMNWLNQFPAWL 5396
            S  F    R      + +A        D  W +  P +L
Sbjct: 909  SVTFDFVSRESNRAAHSVAKYVFLEGKDFVWDHIGPDFL 947


>ref|XP_008367240.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 806

 Score =  417 bits (1073), Expect = e-123
 Identities = 226/585 (38%), Positives = 325/585 (55%), Gaps = 10/585 (1%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   GY+ P R +RQGDPLSP+LF+I +E  S+L+ +        G +       +TH
Sbjct: 91   INGSPTGYIQPQRXLRQGDPLSPFLFLICTEGFSSLIKKGMEXGVLHGYRFTPNGSPLTH 150

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADDS+LF  AT  +AQ V  IL+ Y   SGQ +NL KSS +F  +TS  I+  I   
Sbjct: 151  LFFADDSVLFGNATVEEAQGVVDILNTYAXGSGQEINLSKSSIFFGTSTSKRIKKRIGNT 210

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L     +   KYLGL    G SK+ VF  + D +  R+ GW   FLS AGK+VLIKAV  
Sbjct: 211  LGIPHKDGFGKYLGLQADFGLSKKAVFXEIRDKMEARLAGWSEQFLSQAGKEVLIKAVAM 270

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
             LPN+ MSCFKLP+ +C ++ +    +WW+    + G  HW SW+K+ K K  GGLGF D
Sbjct: 271  XLPNFAMSCFKLPIGVCRDMEKAVRSYWWRGNSQKRG-CHWASWDKLMKQKSAGGLGFKD 329

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN A LAK  WR+I  P  L++ +L+ +Y+P             SW WK   +++  
Sbjct: 330  IQCFNLAFLAKIGWRLIQNPTSLLANVLRDKYYPGKCFKDAGKGRNTSWGWKGIFESRTV 389

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSF--KPIPSGKVDLEDFWVRDLMNQDGVSWNKE 4229
            L  G+R+ VGDG+SI +   PW+P+  +F  KP+     +LE+  VRDL++    SW + 
Sbjct: 390  LQHGVRWRVGDGESINIRKDPWLPTPTTFLAKPLD----NLEEIKVRDLIDPISKSWKEG 445

Query: 4230 LVFEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHL----KLSQKD 4397
            ++ E F   +A TIL IP+S +G  D++VWH    G YSVK+ Y   M++     L +K 
Sbjct: 446  VITEGFNREEARTILSIPLSKSGCLDRLVWHYTVNGDYSVKTGYGVAMNMMENGALGKKG 505

Query: 4398 EPESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCG 4577
               SS   R N   W + W L V  K++ F+W+C NKA+  R +L RR ++++ IC +C 
Sbjct: 506  RGASSM-LRKNNLTWKRIWKLQVPNKIKFFLWKCCNKALAVRHNLQRRQIRVENICGVCN 564

Query: 4578 LQEETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLC-SIKENSYAEDRIQL 4754
              +E+  HLFF C  + + W  +P+  N+       F   W  +C S K    AE+ +Q 
Sbjct: 565  TFDESENHLFFQCDFSHRFWFGSPLHINSHELAGADFLENWDKICTSTKNMDKAEEILQE 624

Query: 4755 SVYLLWWLWKTRNLWIFQKCVTNEKDLV---DGAIWEWQEMLSIS 4880
              + LW LWK RN  +F        +++      I+E++E LS+S
Sbjct: 625  VAFGLWRLWKNRNDVVFNGVHRQHLEVMMLWRKNIYEFREALSLS 669


>ref|XP_009113843.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 896

 Score =  414 bits (1063), Expect = e-121
 Identities = 244/719 (33%), Positives = 358/719 (49%), Gaps = 2/719 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   GY+ P RGIRQGDPLSPYLFI+ +  LS+L+ +A   +  QG+KI   S  V H
Sbjct: 148  INGSPRGYIQPGRGIRQGDPLSPYLFILCANVLSHLMTKAAADRKIQGMKISTQSTAVNH 207

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADDS+ F  A     + +K IL +Y + SGQ VNL KSS  F       ++  +  I
Sbjct: 208  LLFADDSLFFTLANPKNGRAIKRILSQYERISGQAVNLSKSSITFGSRVKDQVKTQMRNI 267

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L   +     KYLG+P   GR K E   YV   V+ + NGW + FLS  GK+VL K++ +
Sbjct: 268  LGIHNEGGGGKYLGIPEQFGRKKTENLEYVVATVKAKTNGWHHRFLSPGGKEVLTKSIAS 327

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A P Y M+ FK+P  +C++I     +FWW       G +HW +W++++  KK GG+GF D
Sbjct: 328  ATPVYPMNVFKMPKKVCDDINNTLAQFWWGKSDGSKG-MHWFAWQRMSLPKKEGGMGFRD 386

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
               FNDALLAKQ+WRI+ +PN LM+++LK +YFP   +L    K   S++W S L  +  
Sbjct: 387  FEKFNDALLAKQVWRILIKPNSLMARVLKGKYFPNSNILKAGTKKQSSYIWNSLLHGQAL 446

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  GLR+ +G+G+S+ +   PW+P+ P   PIP  + +     V +LM Q+   WN+EL+
Sbjct: 447  LKRGLRFIIGNGESVSLWADPWLPTSPPRSPIPKDQSN-PMTKVSELMKQNQTGWNEELI 505

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLKLSQKDEPESSH 4415
                   DA  IL + +    D D +VWH  K G YSVKS Y    H       EP    
Sbjct: 506  RHTIVEADAEEILSMKLCAYADTDPLVWHYNKSGEYSVKSGYWLATHDPQDLPIEPPPGS 565

Query: 4416 GTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQEETM 4595
                N       W L    KLQHF+W+ +  ++P   +L RR V     C  C  QEET 
Sbjct: 566  IILKN-----MIWKLPTAPKLQHFLWKMVTSSLPLGSNLQRRHVTTSVKCPHC-QQEETT 619

Query: 4596 EHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCSIKENSYAEDRIQLSVYLLWW 4775
            EHLFF C  AQ+ W+ + +  N   +   T +     L   K  +  +    L  ++LW 
Sbjct: 620  EHLFFECFYAQRIWRASGLPHNIFYQAQSTLEDKLMALLQ-KIPNLPDHLRHLPWWILWR 678

Query: 4776 LWKTRNLWIFQKCVTNEKDLVDGAIWEWQEMLSISSSGHIGRNKQVIXXXXXXXXXXXXX 4955
            +WK RN  IFQ+   + +  +  A ++ +E L    S     ++Q +             
Sbjct: 679  IWKCRNKMIFQQTSIHWRTTLQSAYFDTKEWLEAYQSVDKDEDRQGLRRDMEHQRNKWTK 738

Query: 4956 XXXXXXCVAISAVIGDGCNNCYGGWIMNENMHNLK-AWSTSRNDNLNLVEAMLFGIRLIM 5132
                           +       GWI+ ++M   K A   S       +E  L  + L M
Sbjct: 739  PPTGFVKCNYDGAFNNIQRETKAGWIIRDDMGRFKGAAHASNQQPTTALEGELQALLLAM 798

Query: 5133 ISAFESGIKNVTICLEDENL-IQRLNNRNTQEWNMTPLIEDIFLLWYLFDSCFFSISDR 5306
            ++ +  G K+V    E +N+ + +L N  +   ++T  I DI+     F+   F  ++R
Sbjct: 799  MNCWSKGYKHV--IFEGDNINVMKLANGESTNIDVTNWIRDIWRWPAKFEEIKFCWTNR 855


>ref|XP_008351830.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1106

 Score =  419 bits (1076), Expect = e-120
 Identities = 226/577 (39%), Positives = 321/577 (55%), Gaps = 5/577 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG   G++ P RG+RQGDPLSP+LF++ +E LS LL +   Q +  G K       +TH
Sbjct: 342  VNGTPTGFIVPQRGLRQGDPLSPFLFLLCTEGLSVLLRKGLEQDALHGFKFTDTGTPITH 401

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADDS++F  AT ++A+ V   L  Y   SGQ VNL KSS +FS  T    + DI   
Sbjct: 402  LFFADDSVVFGNATVDEARAVAEALKVYACGSGQEVNLTKSSVFFSPKTPNRTKRDIEGT 461

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L     +   KYLGL    G SK+ VF+ V D V  R+ GW   FLS AGK+VLIK+V  
Sbjct: 462  LGIQCKQGFGKYLGLQADFGHSKKAVFAEVRDKVEARLAGWTEQFLSQAGKEVLIKSVAM 521

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            ALPNY MSCFKLP+ +C +I +   KFWWK    + GI HWVSW++I+K K  GGLGF D
Sbjct: 522  ALPNYAMSCFKLPIGVCRDIEKAIRKFWWKGNDQRHGI-HWVSWDRISKRKMSGGLGFKD 580

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN ALLAK  WR+   P  L++ +LK +Y P             SW WK   +A+  
Sbjct: 581  IQCFNLALLAKIGWRLTCYPTSLLATVLKDKYHPGCTFKEAGRGKLTSWGWKGIYEARKV 640

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  G+R+ VG+G+ I + + PW P   +F+  P   +D     V +L+     SW    +
Sbjct: 641  LLQGIRWRVGNGQRINIRDDPWFPKPSTFRVCPYENLDAT--MVCELIEPASNSWKDNRI 698

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAY----KQLMHLKLSQKDEP 4403
            F  F   DA TIL IP+S  G  DK++WH    G+YSVKS Y    + + +  L +K   
Sbjct: 699  FAGFHREDAETILSIPLSHFGCEDKLMWHYSVNGVYSVKSGYGIAREMMENGALGKKGLG 758

Query: 4404 ESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQ 4583
              S  T+  K++W++ W L V  K++ FIWRC N A+  R ++ +R +++D +C +C   
Sbjct: 759  APSEPTQL-KKVWSRIWRLQVPNKIKFFIWRCCNNALAVRRNIQKRHMRVDNVCGVCNAV 817

Query: 4584 EETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTF-KGWWQDLCSIKENSYAEDRIQLSV 4760
            +ET  HLFF C  +   W  +P+  N+   E + F   W +    +K    AE+  Q   
Sbjct: 818  DETENHLFFRCRFSHIFWFSSPLHLNSHVLEGYDFLDSWGKFQAGMKGKENAEEICQEFA 877

Query: 4761 YLLWWLWKTRNLWIFQKCVTNEKDLVDGAIWEWQEML 4871
            + LW +WK RN  +F+       +++D  +W W+ ++
Sbjct: 878  FGLWRIWKNRNDAVFKGLYRQPNEVMD--LW-WKNII 911



 Score =  135 bits (340), Expect = 3e-28
 Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
 Frame = +2

Query: 2483 ALTHWSKNNKTNAAKAIELCKNKLNLLRQE----GGHRNWKEWNVVKTALSKAYSEEEKF 2650
            +L +W K    N+ K +EL K ++ +  Q      G    KE       L  A+ +EE +
Sbjct: 4    SLKNWYKETGXNSKKKVELLKAEIRVALQSKEFSSGAVKQKE-----KELRVAHKDEELY 58

Query: 2651 WGQKARISWLQEGDRNSKFFHACTIQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNH 2830
            W  K+R  WL EGD+N+KFFHA T++RR RN I  +  S     +    I     G+++ 
Sbjct: 59   WKTKSRNQWLNEGDKNTKFFHAQTLKRRSRNQIRGIVDSQGVWQEEDKKIADTAVGYFSE 118

Query: 2831 LFKSSVPQDDVHILEGMPKSISAEVNKDLTRQVDNMEIKNALFELHPTKAPGLDGMTPIF 3010
            LF+SS P     I+  +   IS E N  LT  V   EI  A+ ++ P++APG DG +  F
Sbjct: 119  LFQSSRPGQIEDIVRNVDARISPEDNNALTGPVTTAEIVLAVSQIPPSRAPGPDGFSGCF 178

Query: 3011 FQHFWPIISDHLCNAVKNFFSQSKMLKSVNHTLITLIPKIRNPTSISHY 3157
            +Q  W  + + +   +K F+    +L+ +NHT + LIPK+R P +++ +
Sbjct: 179  YQDHWNTVGEDVVKIIKAFWHSGTLLRQLNHTNLVLIPKVRCPKNMAQF 227


>ref|XP_008387184.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 887

 Score =  411 bits (1057), Expect = e-120
 Identities = 217/571 (38%), Positives = 323/571 (56%), Gaps = 9/571 (1%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG   G++ P RG+RQGDP+SP+LF+I +E LS +L + +   S  G+++      ++H
Sbjct: 206  LNGSATGFIQPKRGLRQGDPMSPFLFLICAEGLSAMLRKREEHGSLHGIRVTPEGMQISH 265

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADD+++FCKAT  + + +  +L+ Y +ASGQ++N  K S YF        +  I + 
Sbjct: 266  LFFADDAVIFCKATEVEVREILEVLNCYAEASGQIINRAKCSLYFGNQCPRKQRRLIESC 325

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
             N +  E   +YLGL    G SK+ VF  V + +  RINGW   FLS AGK+V+IK V  
Sbjct: 326  TNFVGNETFGRYLGLSADFGASKKVVFEGVREALEGRINGWAEQFLSPAGKEVMIKTVAM 385

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            ALPNY MSCFKLP+N+C E+      FWW+  + + G +HW+SWEK+ + KK+GGLGF D
Sbjct: 386  ALPNYAMSCFKLPVNLCKEMETNIANFWWRGSREKNG-MHWISWEKMKRRKKVGGLGFRD 444

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN A L K  WRI+T P  L+ K+LK +YFP+   +  +     SW WK  ++ K  
Sbjct: 445  ILSFNLAYLTKIGWRILTNPLSLLGKILKEKYFPECSFMEAKVGKRSSWGWKGIMQGKRI 504

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  G R+ VGDG SIRV   PW+P   +F+ + S   D+    V+DL++    SW  ELV
Sbjct: 505  LERGRRWRVGDGSSIRVKIDPWLPRPHTFR-VNSNHPDM-PVMVKDLIDPVTGSWMVELV 562

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHL----KLSQKDEP 4403
               F   ++N IL IP    G  D+I+WH    G Y+V++ Y   M +    +L +K   
Sbjct: 563  KGCFEEEESNIILGIPTXLEGCDDRIIWHXTSNGDYTVRTGYGIAMDMQENXELGRKGTG 622

Query: 4404 ESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQ 4583
              S     +K+ W + W L V  K++ FIWRC   ++  R +L RR ++++T C +CG  
Sbjct: 623  GCSRRDEPBKR-WMEIWRLEVPNKMKFFIWRCCXSSLAVRGNLHRRRMRVNTACVLCGDA 681

Query: 4584 EETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCSIKENSYAEDR-----I 4748
             ET  HLFF C  ++  W   P++ + T      F   W  LC    N + +++     +
Sbjct: 682  RETEHHLFFECEFSRVFWFSCPLQLDITFASGKEFGDCWHXLC----NRFRKEKNHVLIL 737

Query: 4749 QLSVYLLWWLWKTRNLWIFQKCVTNEKDLVD 4841
            Q  V+++W +WK RN  +F+    N  + V+
Sbjct: 738  QECVFIMWRIWKCRNDLMFKGMEANPMESVN 768


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  404 bits (1037), Expect = e-120
 Identities = 214/663 (32%), Positives = 342/663 (51%), Gaps = 11/663 (1%)
 Frame = +3

Query: 3417 YCKASGQMVNLEKSSAYFSKNTSVHIQNDICAILNGISAEPCAKYLGLPMVIGRSKREVF 3596
            Y +ASGQ++NLEKSS +FSKN  +  + D+C+ L G++     KYLGLPMVI R+K ++F
Sbjct: 2    YEEASGQLINLEKSSVFFSKNMPMEQRQDVCSALGGMTEMTQGKYLGLPMVISRTKEQIF 61

Query: 3597 SYVTDCVRKRINGWQNNFLSAAGKDVLIKAVINALPNYVMSCFKLPLNICNEIRQITTKF 3776
             ++ + ++++++ W+N  LS AGK+V++KAV  A+P Y MS FKLP  +C +I  +   +
Sbjct: 62   GFIKENIKRKMHDWRNKLLSTAGKEVMLKAVSMAMPTYAMSVFKLPRKLCKDISALMANY 121

Query: 3777 WW--KNCKNQAGILHWVSWEKIAKDKKLGGLGFHDISLFNDALLAKQLWRIITQPNLLMS 3950
            WW   N KN+   LHW+SW K++  +  GGLGF DI  +N ALL KQ+WRI+T+PNLL+S
Sbjct: 122  WWGEANGKNK---LHWLSWRKMSLSRNAGGLGFKDIEAYNKALLGKQVWRILTKPNLLIS 178

Query: 3951 KLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYTLSLGLRYEVGDGKSIRVCNSPWIPS 4130
            K+L+ARYFPK  +L+  PK   SW+W+  L A+  +  G+   +G+G+S  +    WIP 
Sbjct: 179  KVLRARYFPKDSILTCRPKQNASWIWQGLLGARRVVEKGVIRRIGNGRSTSIWGHRWIPG 238

Query: 4131 MPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELVFEAFCLNDANTILKIPISPTGDRDK 4310
              S +P   G        V +L++     W +  +F+ F  +DA  IL IP+S  G  D 
Sbjct: 239  SSSGRPTSLGPQSYNLKMVNELISHH--RWKRNTIFQHFNQSDAEKILNIPLSLMGREDN 296

Query: 4311 IVWHLEKKGLYSVKSAYKQLMHLKLSQKD------EPESSHGTRSNKQLWTKCWNLGVKK 4472
              W     G+Y+V S YK +M  + + K        P  +   + ++Q+WT  W L +K 
Sbjct: 297  YYWQHNPGGIYTVSSGYKCIMKERTNVKQIAPEEAGPSITGEDQQSRQMWTTLWKLNIKH 356

Query: 4473 KLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQEETMEHLFFHCPRAQKTWKLAPV 4652
            K++ FIW+C+  A+P R  + R+    D +C +CG  +ET+EHL  +C  +Q+ WK AP+
Sbjct: 357  KVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVWKAAPI 416

Query: 4653 EWNNTSKENFTFKGWWQDLCSIKENSYAEDRIQLSVYLLWWLWKTRNLWIFQ-KCVTNEK 4829
            +W+    +   F+ WW  +   +      + I L+  +LW LWK RN   F+ K   +  
Sbjct: 417  QWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAIILWQLWKERNSKEFENKTSCSPA 476

Query: 4830 DLVDGAIWEWQEMLSISSSGHIGRNKQVIXXXXXXXXXXXXXXXXXXXCVAISAVIGDGC 5009
              +  A  EW E    +     G+ +  I                        A+     
Sbjct: 477  RTIGKAQKEWLEQEEFTK----GKTRLSIRETTCNKEEQHQGCNEEGTIKLEMAITSQNG 532

Query: 5010 NNCYGGWIMNENMHNLK--AWSTSRNDNLNLVEAMLFGIRLIMISAFESGIKNVTICLED 5183
                G  +      +L+   W+       + V      + L++  AFE     +TI  + 
Sbjct: 533  QTSLGIGVTATKHPSLRLAEWALKERSKGDKVIDEAMAVHLVLCKAFEHQWSRITIQFQS 592

Query: 5184 ENLIQRLNNRNTQEWNMTPLIEDIFLLWYLFDSCFFSISDRRWIANCNRLALLALDGNSD 5363
            ++L++++   +     +  LIEDI  +  LF  C FS+++   I     L+  A     D
Sbjct: 593  QDLMRQIKYNSPSNSRLATLIEDILSMQKLFRLCLFSLANENSIKRSRDLSSHAFGILVD 652

Query: 5364 MNW 5372
              W
Sbjct: 653  EEW 655


>ref|XP_008234850.1| PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
          Length = 1009

 Score =  413 bits (1061), Expect = e-119
 Identities = 218/555 (39%), Positives = 327/555 (58%), Gaps = 5/555 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   G +TPSRG+RQGDPLSP+LF+I +E L++L+   + +Q+  G ++ R   +++H
Sbjct: 251  INGAPIGKITPSRGLRQGDPLSPFLFLICAEGLTSLIKAYEARQALHGFQLRRDGVSISH 310

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADDS+LFC A   +A+ V  IL  Y   SGQ VN +KSS ++S + S  ++  +  I
Sbjct: 311  LLFADDSVLFCNADAREAECVLNILQCYEAGSGQSVNFDKSSIFYSAHCSSRLRLQMEQI 370

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L     +   KYLG+    G SKR+VF  V   +  +++GW   FLS AGK+VLIKAV  
Sbjct: 371  LQIKGRKEFGKYLGIMADFGTSKRKVFEEVRRKLDGKLHGWAEQFLSPAGKEVLIKAVAM 430

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A+P Y MSCFKLP+ +C EI     +FWWK+  ++ GI HW SW K+++ KK GGLGF D
Sbjct: 431  AMPCYTMSCFKLPVTLCKEIEAAMARFWWKSHTDKNGI-HWASWTKLSQLKKAGGLGFRD 489

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            +  FN ALLAK  WRI+  P+ L++ LL  +YF     L+   + + SW WK  L  +  
Sbjct: 490  LQCFNMALLAKIGWRILLNPSSLLACLLHDKYFVGASFLTATSQKSSSWGWKGILLGRRL 549

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  GLR+ +GDG +++V N PW+P+  +F+ + S  +DL    V +L++    +W K+++
Sbjct: 550  LESGLRWRIGDGTTVQVRNDPWLPTPYTFRTL-SRHLDLPSM-VHELIDPLLKTWKKDVI 607

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHL----KLSQKDEP 4403
               F   +A+ IL IPI+  G  DK++WH    G Y+V+S Y+  +HL    +L +K   
Sbjct: 608  NRCFVPEEASHILSIPINRWGCPDKLIWHFSMHGRYTVRSGYELALHLQRNGELGRKGAG 667

Query: 4404 ESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQ 4583
            E+S  + S   +W   W++    KL+ FIWR  +  +  R +L RR V     C  CG Q
Sbjct: 668  EAS-SSSSQSAVWKSVWHVDAPPKLKAFIWRGCSNFLAVRHNLRRRRVPCTGECGFCGFQ 726

Query: 4584 EETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQD-LCSIKENSYAEDRIQLSV 4760
            +ET  H+FF C  A+  W  +P++ + +      F   WQ  + ++  + +A + IQ  V
Sbjct: 727  DETQAHIFFECDFARAFWFASPLQLDVSKLAGDDFISTWQHMMTTLNSSEHAAEAIQWFV 786

Query: 4761 YLLWWLWKTRNLWIF 4805
            + LW +WK RNL +F
Sbjct: 787  FGLWRIWKARNLAVF 801



 Score = 76.3 bits (186), Expect = 4e-10
 Identities = 37/125 (29%), Positives = 64/125 (51%)
 Frame = +2

Query: 2783 DSPAAIETEITGFYNHLFKSSVPQDDVHILEGMPKSISAEVNKDLTRQVDNMEIKNALFE 2962
            D    I      ++  LF +S P      ++ + + +S   +  L + V   E+   +  
Sbjct: 12   DKETDIHDIAVSYFQELFTTSRPSRIHETVDCVSQRLSMSESSPLLKTVTRKEVFETVKS 71

Query: 2963 LHPTKAPGLDGMTPIFFQHFWPIISDHLCNAVKNFFSQSKMLKSVNHTLITLIPKIRNPT 3142
            L P+ +PG DG T  FFQ+ W ++ D +   V++FF   K+ + +NHT ITLIPK+ NP 
Sbjct: 72   LSPSASPGPDGFTGAFFQNHWSVVGDDVFRVVQSFFHSGKLPRRLNHTHITLIPKVLNPR 131

Query: 3143 SISHY 3157
            ++  +
Sbjct: 132  NMKQW 136


>ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
          Length = 1374

 Score =  420 bits (1080), Expect = e-119
 Identities = 228/593 (38%), Positives = 326/593 (54%), Gaps = 8/593 (1%)
 Frame = +3

Query: 3051 MLLKISFPNLKCLRVL-IIHLLP*SLKSETPLPFPTINGQVAGYVTPSRGIRQGDPLSPY 3227
            M+ K+ F  + C RV+  I  +  S+          +NG   GY+ P RG+RQGDPLSP+
Sbjct: 523  MMSKLGFAPMFCNRVMECISTVSFSI---------LVNGAPTGYIQPQRGLRQGDPLSPF 573

Query: 3228 LFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTHLFFADDSILFCKATTNQAQMVKAI 3407
            LF+I +E  S+L+ +   +    G K       +THLFFADDS+LF  AT  +AQ V  I
Sbjct: 574  LFLICTEGFSSLIRKGMERGILHGYKFTTNGIPLTHLFFADDSVLFGNATVEEAQGVADI 633

Query: 3408 LDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAILNGISAEPCAKYLGLPMVIGRSKR 3587
            L+ Y   SGQ +NL KSS +F  +TS   +  I   L     +   KYLGL    G SK+
Sbjct: 634  LNTYASGSGQEINLSKSSIFFGTSTSKRTKKRIGNTLGIPYKDGFGKYLGLQADFGHSKK 693

Query: 3588 EVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVINALPNYVMSCFKLPLNICNEIRQIT 3767
             VF+ + D +  R+ GW   FLS AGK+V+IKAV  ALPNY MSCFKLP+ +C ++ +  
Sbjct: 694  AVFAEIRDKIEARLAGWSEQFLSQAGKEVMIKAVAMALPNYAMSCFKLPIGVCRDVEKAV 753

Query: 3768 TKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHDISLFNDALLAKQLWRIITQPNLLM 3947
              +WW+    + G  HW SW+++ K K  GG+GF DI  FN A LAK  WR+I  P  L+
Sbjct: 754  RSYWWRGNTQKRG-CHWTSWDRLMKQKSAGGMGFKDIQCFNLAFLAKIGWRLIQNPTSLL 812

Query: 3948 SKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYTLSLGLRYEVGDGKSIRVCNSPWIP 4127
            + +LK +Y+P             SW WK   +    L  G+R+ VGDG+SI +   PW+P
Sbjct: 813  ATVLKDKYYPGKCFKDAGKGRNTSWGWKGIFEGHMVLQHGVRWRVGDGESINIQKDPWLP 872

Query: 4128 SMPSF--KPIPSGKVDLEDFWVRDLMNQDGVSWNKELVFEAFCLNDANTILKIPISPTGD 4301
            +  +F  KP+ S    LE+  VRDL++    SW +E++   F  ++A  IL IP+S +G 
Sbjct: 873  TPTTFLAKPLDS----LEETKVRDLIDPISKSWKEEVILAGFNRDEARKILSIPLSKSGC 928

Query: 4302 RDKIVWHLEKKGLYSVKSAYKQLMHL----KLSQKDEPESSHGTRSNKQLWTKCWNLGVK 4469
             D++VWH    G YSVK+ Y  +M+L     L +K     S   R N   W + W L   
Sbjct: 929  IDRLVWHYTVNGDYSVKTGYGVVMNLMENGALGKKGRGAPSE-HRKNNLTWKRIWKLQAP 987

Query: 4470 KKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQEETMEHLFFHCPRAQKTWKLAP 4649
             K++ FIW+C NKA+  R +L RR ++++ IC +C   +E+  HLFF C  + + W  +P
Sbjct: 988  NKIKFFIWKCCNKALAVRHNLQRRQIRVENICGVCNTFDESENHLFFQCEFSHRFWFGSP 1047

Query: 4650 VEWNNTSKENFTFKGWWQDLC-SIKENSYAEDRIQLSVYLLWWLWKTRNLWIF 4805
            +  N+       F   W  +C S K    AE+ +Q   + LW LWK RN  +F
Sbjct: 1048 LHINSHELAGVDFLESWDKICTSTKNMEKAEEILQEVAFGLWRLWKNRNDVVF 1100



 Score =  208 bits (530), Expect = 1e-50
 Identities = 152/515 (29%), Positives = 238/515 (46%), Gaps = 4/515 (0%)
 Frame = +2

Query: 1625 MKACMWNCRGLGGPSTISQLKEVLRLHLPDLVFLCETKKKKSFITTVCRKLKLDDRWISV 1804
            MK   WNC+G+GG  T+  L E  RLH PD+V L ETK K      +   L L+  + +V
Sbjct: 1    MKLITWNCQGIGGDLTVDNLLEANRLHTPDIVILLETKNKSHRYGFLKXSLGLEYMF-AV 59

Query: 1805 EPNGYRGGLLVFWSANVSVCQVFCSQFCIEVEL--EMLGSVGKFWVIF-VYASTDASLRK 1975
             P+G  GGL VFW     V  +    F IE+++  E+L    K W +F +YASTD   RK
Sbjct: 60   XPHGLSGGLCVFWKDGSQVTLLKSENFVIEMKIWDEILN---KQWRLFAIYASTDEKKRK 116

Query: 1976 EQWVFLEQAKSKWGKLWVMGGDFNDITSNEDKKGGRTRSQVSLTDFRDFIHILEMGDIAF 2155
            +QW  L +   +     ++  DFNDI  NE+K+GG  R   S+ DFR+F+   E+ D+ +
Sbjct: 117  DQWKRLGKRIEQESDCCLLIRDFNDILCNEEKEGGNYRPASSMRDFREFVARNELMDLGY 176

Query: 2156 RGYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAEN 2335
             GYP+TW NNRE    I++R+DR   +  W   +    + H+ +  SDH++L+L+     
Sbjct: 177  EGYPFTWRNNRESLP-IQQRLDRGLATMGWNNTYLDTTIRHLVLEGSDHAMLVLSTELIQ 235

Query: 2336 GVGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTH-WSKNNK 2512
             V   ++F+++  W                            K++ CR  + H W  +  
Sbjct: 236  -VRRGRKFSYDARW---------------------------SKLEECRELVAHEWEGH-- 265

Query: 2513 TNAAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEGD 2692
               + A  +C+ KL +LR                               K    W Q   
Sbjct: 266  LGGSLAFRICE-KLKMLR-------------------------------KRLKVWYQGRG 293

Query: 2693 RNSKFFHACTIQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNHLFKSSVPQDDVHIL 2872
            RNSK      I   K + I R Y S++   +    ++TE          S  P     + 
Sbjct: 294  RNSKQ----AIDNLK-DEIRRAYTSNQFASE---VVKTE-----RKRSSSCRPSKIREVE 340

Query: 2873 EGMPKSISAEVNKDLTRQVDNMEIKNALFELHPTKAPGLDGMTPIFFQHFWPIISDHLCN 3052
            + M   +S E N+DL   + + EIK A F++   +A G DG +  F++  W  + + +  
Sbjct: 341  DCMETRVSPEDNRDLVAPITDEEIKEATFQIPSERALGPDGFSGCFYKDHWTTVGEDVVK 400

Query: 3053 AVKNFFSQSKMLKSVNHTLITLIPKIRNPTSISHY 3157
            A+K F+    ML+ +NHT + LIPK++ P ++S +
Sbjct: 401  AIKAFWHSGNMLRKLNHTNLVLIPKVKCPKNMSQF 435


>ref|XP_009140270.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 866

 Score =  407 bits (1046), Expect = e-119
 Identities = 225/578 (38%), Positives = 321/578 (55%), Gaps = 8/578 (1%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   GY+ P RGIRQGDPLSPYLFI+ +E LS+++ +A M++  QG+KI   SP+V H
Sbjct: 119  INGSPKGYIKPERGIRQGDPLSPYLFILCAEVLSHMMTRAAMKRKIQGIKISTHSPSVNH 178

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADDS+ F  A     + +K IL +Y K SGQ VNL KSS  F       ++  +  +
Sbjct: 179  LLFADDSLFFSLANPKNGRAIKQILQQYEKVSGQAVNLNKSSITFGSRVKDQVKTQMRHL 238

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L   +     KYLG+P   GR K E+  YVT+ V+ +  GWQN FLS  GK+VLIK+V +
Sbjct: 239  LGIHNEGGGGKYLGIPEQFGRKKAEILKYVTEKVKTKTQGWQNKFLSPGGKEVLIKSVAS 298

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A   Y M+ FKLP ++C EI  I   FWW       G +HW +W +++  KK GG+GF D
Sbjct: 299  ATSVYPMNTFKLPKSVCEEINNILATFWWGKDDGSKG-MHWFAWNRMSLPKKEGGMGFRD 357

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FNDALL KQ WRI+T+PN LM++++K RYFP   +L+      +S++W+S L  K  
Sbjct: 358  IEKFNDALLGKQAWRILTKPNSLMARVMKGRYFPSTSILNARETRQNSYIWRSILHGKDL 417

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIP----SGKVDLEDFWVRDLMNQDGVSWN 4223
            L+ G+R  +G+G +I     PW+P+ P   P+P     G   + DF  R L       WN
Sbjct: 418  LTKGVRCVIGNGNTIDTWTDPWLPTNPPRAPVPIFDQHGNSKVSDFMHRGLK-----EWN 472

Query: 4224 KELVFEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLKLSQKDEP 4403
            +EL+       DA  IL I +  + + D++VWH  K G Y+VKS Y    H   +Q+  P
Sbjct: 473  EELIRNTMNQADAEEILAIKLCSSDEDDQLVWHYNKTGDYTVKSGYWLATHTPNNQQVIP 532

Query: 4404 ESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQ 4583
                G    KQL    W L    K++ F+W+ +  ++P   +L RR +     C  C  Q
Sbjct: 533  PP--GDTQLKQL---IWKLNTAPKVKQFMWKMITLSLPLGKNLQRRHITNSVKCPHC-YQ 586

Query: 4584 EETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCSIKENSYAEDRI-QLSV 4760
            EET +HLFF C  AQ  W+ +    +   +   T +     L  + +++   D + QL  
Sbjct: 587  EETADHLFFDCINAQCIWRASGYPNSGLLRSQVTLEAKLSLL--LNQDATIPDHLKQLPW 644

Query: 4761 YLLWWLWKTRNLWIFQKCVTNEKDLVDGAIW---EWQE 4865
            ++LW +WK RN  IFQ+ +T+ + L+  A     EW E
Sbjct: 645  WILWRIWKDRNKMIFQQKLTHWRYLLQAAYQDTKEWME 682


>ref|XP_008345353.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 953

 Score =  408 bits (1049), Expect = e-118
 Identities = 256/758 (33%), Positives = 367/758 (48%), Gaps = 11/758 (1%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            ING   GY+ P RG+RQGDPLSP+LF++ +E LS LL +     +  G K       +TH
Sbjct: 189  INGTPTGYIVPQRGLRQGDPLSPFLFLLCTEXLSMLLRKGLELGALHGFKFTPSGTPLTH 248

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            LFFADDS++F  AT ++A+ V   L  Y + SGQ +NL KSS +FS  TS  ++ +I   
Sbjct: 249  LFFADDSVVFGNATVDEARAVVEALQTYXRGSGQEINLSKSSVFFSXKTSNRLKREIEET 308

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L         KYLGL    G SK+ VF+ V D V  R+ GW   FLS AGK+VLIKAV  
Sbjct: 309  LGIQCRMGFGKYLGLQADFGHSKKAVFAEVRDKVEARLAGWTEQFLSQAGKEVLIKAVAM 368

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            ALPNY MSCFKLP  +C +I +   KFWWK    + GI HWVSWE+I+K KK GGLGF D
Sbjct: 369  ALPNYAMSCFKLPXGVCRDIEKAIRKFWWKGDDKRKGI-HWVSWERISKQKKSGGLGFKD 427

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            I  FN A LAK   R+    + L++ +L+ +Y P             SW WK   + +  
Sbjct: 428  IQCFNLAFLAKIGXRLSLNSSSLLATVLRDKYHPGKSFKEAGRGKNTSWGWKGIFEGRKV 487

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  G+R+ VG+G+ I +    W P   +F+  P   VDL+   V DL++    SW   ++
Sbjct: 488  LQNGIRWRVGNGECINIREDXWFPKPSTFRVRP--XVDLDAIMVCDLIDSGSNSWKSNII 545

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHL----KLSQKDEP 4403
               F   DA+TIL IP+S  G  DK VWH    G YSVKS Y   M L     L +K   
Sbjct: 546  RAGFHREDADTILSIPLSYFGCDDKKVWHYTANGDYSVKSGYGVAMDLMENGALGKKGRG 605

Query: 4404 ESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQ 4583
              S   + N  +W K W L V  K++ FI RC + A+  R +L RR +++D +C +C   
Sbjct: 606  APSEQQQRN-NVWVKIWRLRVXNKIKLFIXRCCSNALAVRRNLQRRHLRVDNVCGVCNAP 664

Query: 4584 EETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCS-IKENSYAEDRIQLSV 4760
            +E   HLFF C  +   W   P   N+       F   W      +K+   A++  Q   
Sbjct: 665  DEXENHLFFRCNFSHLFWFCXPXHLNSVELAGVDFLDSWAKFHKCVKDRVNADEICQEFA 724

Query: 4761 YLLWWLWKTRNLWIFQKCVTNEKDLVDGAIW-----EWQEMLSISSSGHIGRNKQVIXXX 4925
            + LW LWK RN  +F+        ++D  +W     E++E       G +    +     
Sbjct: 725  FGLWRLWKNRNDVVFKGLHRQPLAVLD--LWRKNINEFREAAD-RVDGDVKXKAEGFHPA 781

Query: 4926 XXXXXXXXXXXXXXXXCVAISAVIGDGCNNCYGGWIMNENMHNLKAWSTSRNDNL-NLVE 5102
                             +   A           GW+  +    L+A   S      +   
Sbjct: 782  TARTTPHWQRPXFGTIKINTDAAWXKDSRRAGVGWVGRDFAGVLQAAGGSGTILCQSAAA 841

Query: 5103 AMLFGIRLIMISAFESGIKNVTICLEDENLIQRLNNRNTQEWNMTPLIEDIFLLWYLFDS 5282
            A +  IR  + +  + G  +V +  + + +I  +    ++++N+  ++ DI +L  +F S
Sbjct: 842  AEVIAIRTALSACIKHGFNHVIVESDAQKIIHMIRKEVSEDFNLDCILGDIKILARMFTS 901

Query: 5283 CFFSISDRRWIANCNRLALLALDGNSDMNWLNQFPAWL 5396
              F+   R      + +A   L    D  W N  P +L
Sbjct: 902  VTFAFVPRESNQAAHLVAKYVLKEGRDFTWDNIGPVFL 939


>ref|XP_008367519.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 822

 Score =  404 bits (1037), Expect = e-118
 Identities = 210/555 (37%), Positives = 314/555 (56%), Gaps = 5/555 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG   GY+ P  G+RQGD LSPYLF++ +E LS L+ +        G+K+      +TH
Sbjct: 119  MNGTPKGYILPQXGLRQGDXLSPYLFLLCTEGLSALIRKGXEXGXLHGVKVTPKGMPITH 178

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADDS+LFC+AT  +A+ V+ IL+ Y   SGQ +N+ KSS ++        + DI   
Sbjct: 179  LLFADDSVLFCEATVEEARGVREILNSYAVGSGQEINMLKSSIFYGSKVKKRDKKDIERT 238

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            LN  S     KYLGL    G SK+ VF+ V + +  R+ GW   FLS AGK++LIK V  
Sbjct: 239  LNIQSKAGFGKYLGLQXDFGHSKKVVFNDVRERIESRMTGWAEQFLSPAGKEILIKXVAT 298

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A+PN+ MSCFKLP+ +C +I +    +WW+  + + G+ H  SW+++ + K LGGLGF D
Sbjct: 299  AMPNHAMSCFKLPIGVCRDIEKAIRXYWWRGSEXRRGV-HXTSWDRLIQKKCLGGLGFKD 357

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
               FN A L K  WR+I  P+ L++ +++ +Y+P+            SW WK  L+A+  
Sbjct: 358  FQCFNLAFLGKIGWRLIIFPDSLLASVMRDKYYPEKSFREATIGRGSSWGWKGILEARKV 417

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            L  GL + VGDG++I++   PW P   +F+  P+  V+L   +V +L+NQ+  +W  +L+
Sbjct: 418  LEKGLIWRVGDGETIKIREDPWFPMXSTFRIRPA--VNLGALYVSBLINQESKTWKADLI 475

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLK----LSQKDEP 4403
               F   +ANTIL IPIS  G  D++ W     G YSVKS Y   + L     L +K   
Sbjct: 476  SACFSSEEANTILSIPISXFGSCDRMGWFHXXNGXYSVKSGYGIALELMXSGGLGKKGRG 535

Query: 4404 ESSHGTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQ 4583
              S  T+ NK +W   W L V +K++ FI +C N A+  R +L RR +++D IC +CG  
Sbjct: 536  APSXKTKYNK-IWNAIWRLDVPRKMRFFIXKCXNHALAVRRNLKRRHMRVDNICGVCGXV 594

Query: 4584 EETMEHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCS-IKENSYAEDRIQLSV 4760
            +ET  H+FF C  +      +P++ N+   E   F   W + C+ + + +   + +Q  V
Sbjct: 595  DETENHIFFRCETSHLFXFCSPLQINSFDLEGADFLQSWVNFCNRVADLANTNELLQEFV 654

Query: 4761 YLLWWLWKTRNLWIF 4805
            + LW LWK RN  IF
Sbjct: 655  FGLWRLWKNRNDAIF 669


>ref|XP_009145555.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica rapa]
          Length = 900

 Score =  405 bits (1040), Expect = e-117
 Identities = 214/587 (36%), Positives = 331/587 (56%), Gaps = 3/587 (0%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            +NG + G +TP+RG+RQGDPLSPYLFI+ +E LS+L+ +A M +S  G+KI   +P V H
Sbjct: 152  VNGSLEGIITPARGLRQGDPLSPYLFILCAEVLSHLMTRAMMDRSLLGVKISNNAPAVNH 211

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADDS+ F  A    A+ +K I   Y   SGQ +NL KSS  F    +  ++  + ++
Sbjct: 212  LLFADDSLFFSLANERAAKKLKTIFSIYEAVSGQAINLTKSSITFGAKVNPTVKTKMRSL 271

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            L   +     KYLGLP  +G  K E+F+Y+ + V+     W+  +LS  GK+VL+KA+  
Sbjct: 272  LGIFNEGGIGKYLGLPEQVGSKKSEMFAYIIEKVKSVTQSWKQRYLSTGGKEVLLKAIAV 331

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A+P + M+ F+LP  +C EI  +  KFWW    ++ G LHW SW++++  K+ GGLGF D
Sbjct: 332  AMPIFSMNIFRLPKEVCAEINAVLAKFWW-GAGDKKG-LHWYSWDRVSVPKREGGLGFKD 389

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYFPKGRLLSVEPKPTDSWLWKSWLKAKYT 4055
            + +FN ALL+KQ+WR++  P+ LM+++LKARYFP+  +L+ + K   S+ WKS L  +  
Sbjct: 390  LEIFNQALLSKQVWRVMQHPHCLMARILKARYFPEEDILNAKLKKKASYPWKSILHGRDL 449

Query: 4056 LSLGLRYEVGDGKSIRVCNSPWIPSMPSFKPIPSGKVDLEDFWVRDLMNQDGVSWNKELV 4235
            ++ G+RY +GDG  + +   PWIP  P   P   G   LE+  VR+  N  G  WN++ +
Sbjct: 450  INKGMRYIIGDGSLVNMWTDPWIPDHPPRSPRARGVYQLEE-KVREYFNTTGDQWNEQKL 508

Query: 4236 FEAFCLNDANTILKIPISPTGDRDKIVWHLEKKGLYSVKSAYKQLMHLKLSQKDEPESSH 4415
             E     D + IL + ISP   +D + WH  + G+Y+VKS Y    HL  +    P  +H
Sbjct: 509  REMIIDEDVDKILALKISPVAQQDLLGWHYNEDGIYTVKSGYWLGTHLPSNPPTIP--TH 566

Query: 4416 GTRSNKQLWTKCWNLGVKKKLQHFIWRCLNKAIPTRVHLSRRGVQLDTICAMCGLQEETM 4595
            G    K    K W      KL+HF+WR L++++ T  +L RR +  +  C  C L  ET 
Sbjct: 567  GPAVLKH---KVWKTKAPAKLKHFLWRVLSRSLATGNNLKRRHIIQNDQCRRCCLAIETA 623

Query: 4596 EHLFFHCPRAQKTWKLAPVEWNNTSKENFTFKGWWQDLCSIKENSYAEDRIQLSVYLLWW 4775
            +H+FF CP A+  W+ + V     +  + T +   +       ++       L  +LLW 
Sbjct: 624  DHIFFECPYAKIIWRASGVSNLIINNSSSTLEEKIEACLQCSLSTRLSHMQDLPFWLLWR 683

Query: 4776 LWKTRNLWIFQKCVTNEKDLVDGA---IWEWQEMLSISSSGHIGRNK 4907
            +WK+RN  IF++     + L+  A     EW+++ +    GH+ R +
Sbjct: 684  IWKSRNTLIFRQKEIPWRSLLRYAREDAKEWKQLDNKGEEGHLRRRQ 730


>ref|XP_015965201.1| PREDICTED: uncharacterized protein LOC107488926 [Arachis duranensis]
          Length = 677

 Score =  242 bits (617), Expect(2) = e-117
 Identities = 122/273 (44%), Positives = 171/273 (62%)
 Frame = +3

Query: 3156 INGQVAGYVTPSRGIRQGDPLSPYLFIILSEALSNLLHQAQMQQSYQGLKICRGSPTVTH 3335
            + GQ  GY  P+RGIRQGDPLSPYLF+   E LS LLH+A+  +  QG+++ R   TV H
Sbjct: 391  VEGQPFGYFRPNRGIRQGDPLSPYLFLFCVEGLSFLLHKAEQNRLIQGVQVNRRCQTVNH 450

Query: 3336 LFFADDSILFCKATTNQAQMVKAILDRYCKASGQMVNLEKSSAYFSKNTSVHIQNDICAI 3515
            L FADDS LFCK+  N +Q +  +L+ Y   SGQ  NL+KS+ +FS NT  + +  I   
Sbjct: 451  LLFADDSFLFCKSAPNTSQSILELLEIYEGFSGQKFNLKKSAIFFSHNTPQNTRLAIAQT 510

Query: 3516 LNGISAEPCAKYLGLPMVIGRSKREVFSYVTDCVRKRINGWQNNFLSAAGKDVLIKAVIN 3695
            LN        KYLGLP ++ +SK+  F  + D V+KRI GW+ + LS+ G+  L++AV  
Sbjct: 511  LNIEHIGAQDKYLGLPSIVQKSKKATFDAIKDKVQKRIMGWKRSLLSSGGRHTLLRAVGE 570

Query: 3696 ALPNYVMSCFKLPLNICNEIRQITTKFWWKNCKNQAGILHWVSWEKIAKDKKLGGLGFHD 3875
            A+P Y +SCFKLP  +  EI  + ++FWW   K     + W+ W+ + + KK GGLG  D
Sbjct: 571  AIPIYTLSCFKLPDTLLTEIHSMLSQFWWGQ-KGAERRMVWIKWDTMTRPKKDGGLGIKD 629

Query: 3876 ISLFNDALLAKQLWRIITQPNLLMSKLLKARYF 3974
            +   N ALL KQ WR++  PN  +S++LKA+YF
Sbjct: 630  LRAQNLALLRKQCWRLMKYPNSTLSRMLKAKYF 662



 Score =  212 bits (539), Expect(2) = e-117
 Identities = 114/335 (34%), Positives = 176/335 (52%)
 Frame = +2

Query: 2159 GYPYTWSNNREGDEFIEERIDRVFGSPDWILKFPHALVTHVAMSSSDHSLLLLNVLAENG 2338
            G P+    ++     ++ER+D      +W LKFP+++V  +  S SDH+ LL+    ++ 
Sbjct: 45   GAPFHVDKSKTRRGLVKERLDCYLVGMEWKLKFPNSVVHRLTESGSDHAPLLMETEPQSW 104

Query: 2339 VGNKKRFAFNKNWLESPGIDNVVEVAWNKQVRGTPMFQIQQKIKYCRMALTHWSKNNKTN 2518
              +K+RF + + W     +  +V   W  +V G+ MF + QK+K CR  L  W K +K N
Sbjct: 105  -HSKRRFKYQERWCGEEDVKRIVSEVWKMKVVGSAMFYLAQKLKVCRHRLVQWQKTHKAN 163

Query: 2519 AAKAIELCKNKLNLLRQEGGHRNWKEWNVVKTALSKAYSEEEKFWGQKARISWLQEGDRN 2698
            + K IE  + KL  LR   G    +E   ++  L  AY +EE +W +K+R+ WL+EGD+N
Sbjct: 164  SRKEIEDLQAKLEELRV-AGINGGEEVTSLEKKLELAYLKEESYWQEKSRVKWLKEGDQN 222

Query: 2699 SKFFHACTIQRRKRNNIDRLYKSDESVCDSPAAIETEITGFYNHLFKSSVPQDDVHILEG 2878
            ++FFH     R +RN I RL   D  +   P  I      ++  +F SS   D    LE 
Sbjct: 223  TRFFHQKFQPRVQRNRIWRLVGRDNEIASKPEDIAKIAEDYFCDIFTSSCSTDPNLYLED 282

Query: 2879 MPKSISAEVNKDLTRQVDNMEIKNALFELHPTKAPGLDGMTPIFFQHFWPIISDHLCNAV 3058
            +   ++  +N+ L R V   E+K A F +H   APG DG T  FF  FW I+   +  AV
Sbjct: 283  LEPKVTVSMNRRLQRPVTMDEVKRATFSVHAQSAPGDDGFTAKFFHFFWDIVGGDVFKAV 342

Query: 3059 KNFFSQSKMLKSVNHTLITLIPKIRNPTSISHY*W 3163
            ++FF   ++LKS NHT I LIPK+ +   ++   W
Sbjct: 343  RSFFHSGRILKSFNHTQICLIPKVPDANDMTQINW 377