BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00009123
         (515 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012841528.1| PREDICTED: pentatricopeptide repeat-containi...   134   2e-33
ref|XP_012852931.1| PREDICTED: pentatricopeptide repeat-containi...   119   1e-29
ref|XP_011074074.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-27
ref|XP_012088542.1| PREDICTED: pentatricopeptide repeat-containi...    83   1e-15
ref|XP_002529554.1| PREDICTED: pentatricopeptide repeat-containi...    81   6e-15
ref|XP_010274713.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-14
ref|XP_007208935.1| hypothetical protein PRUPE_ppb014337mg, part...    79   4e-14
ref|XP_008240292.1| PREDICTED: pentatricopeptide repeat-containi...    79   4e-14
ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-13
emb|CBI35789.3| unnamed protein product [Vitis vinifera]               77   1e-13
ref|XP_010549066.1| PREDICTED: pentatricopeptide repeat-containi...    75   8e-13
ref|XP_010549065.1| PREDICTED: pentatricopeptide repeat-containi...    75   8e-13
ref|XP_011008804.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-12
ref|XP_009785057.1| PREDICTED: pentatricopeptide repeat-containi...    75   1e-12
ref|XP_010097570.1| hypothetical protein L484_017380 [Morus nota...    75   1e-12
ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Popu...    74   2e-12
ref|XP_009596989.1| PREDICTED: pentatricopeptide repeat-containi...    73   4e-12
ref|XP_007036793.1| Pentatricopeptide repeat (PPR) superfamily p...    73   5e-12
gb|KVI01449.1| Pentatricopeptide repeat-containing protein [Cyna...    72   1e-11
ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containi...    70   3e-11

>ref|XP_012841528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Erythranthe guttata]
          Length = 690

 Score =  134 bits (336), Expect = 2e-33
 Identities = 71/119 (59%), Positives = 79/119 (66%)
 Frame = -3

Query: 357 MYLSRNQSWRQWPNAKILASILSYFPDKPEFSTFAAVQEIPAAKEAQDTDIELISITNTT 178
           M+LS+NQ WR  PNAK   S LSYFP +PE +  AA +E      A+ +DIELI  TNT 
Sbjct: 1   MFLSKNQPWRHRPNAKAAVSFLSYFPAQPEIT--AAAEEA-----ARSSDIELIGTTNTD 53

Query: 177 HWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
           HWTRRIH+LCTE                RGFRPDSLNISSIVHALC ANRFPEAH RFL
Sbjct: 54  HWTRRIHKLCTENRDADAALRLLHRLRLRGFRPDSLNISSIVHALCHANRFPEAHRRFL 112


>ref|XP_012852931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Erythranthe guttata]
          Length = 316

 Score =  119 bits (298), Expect = 1e-29
 Identities = 64/113 (56%), Positives = 70/113 (61%)
 Frame = -3

Query: 339 QSWRQWPNAKILASILSYFPDKPEFSTFAAVQEIPAAKEAQDTDIELISITNTTHWTRRI 160
           Q W   PNAK   S LSYFP + E +  AA +E     E Q +DIE I  TNT HWTRRI
Sbjct: 12  QPWHHRPNAKAAVSFLSYFPTQLEIT--AAAEE-----EVQSSDIEFIGTTNTDHWTRRI 64

Query: 159 HRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
           H++CTE                RGFRPDSLNISSIVHALC ANRFPEAH RFL
Sbjct: 65  HKICTENRDSDAALRLLHRLRLRGFRPDSLNISSIVHALCHANRFPEAHRRFL 117


>ref|XP_011074074.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Sesamum indicum] gi|747055663|ref|XP_011074075.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020 [Sesamum indicum]
           gi|747055665|ref|XP_011074076.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g18020
           [Sesamum indicum] gi|747055667|ref|XP_011074077.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020 [Sesamum indicum]
          Length = 695

 Score =  115 bits (289), Expect = 5e-27
 Identities = 60/118 (50%), Positives = 76/118 (64%)
 Frame = -3

Query: 357 MYLSRNQSWRQWPNAKILASILSYFPDKPEFSTFAAVQEIPAAKEAQDTDIELISITNTT 178
           M LS+ Q  R  PN+   AS LS+F  KPE +T + + EI  A+  Q++DIE I+IT+ T
Sbjct: 1   MRLSKIQLLRHVPNSTTRASFLSHFSTKPEINTSSPLPEIQGAEAPQNSDIETITITDAT 60

Query: 177 HWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRF 4
           HW+RRIH+LC                  RGFRP+SLNISSI+HALC +NRF EAHHRF
Sbjct: 61  HWSRRIHKLCIVDHDADAALRLLHQLYLRGFRPNSLNISSILHALCNSNRFAEAHHRF 118


>ref|XP_012088542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Jatropha curcas] gi|643709310|gb|KDP23918.1|
           hypothetical protein JCGZ_27078 [Jatropha curcas]
          Length = 666

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 40/87 (45%), Positives = 53/87 (60%)
 Frame = -3

Query: 261 TFAAVQEIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFR 82
           +F +  ++P  +       E ISI N ++WTR+IH LCT+                RG+R
Sbjct: 20  SFFSTYQLPNTEPLHQDHEEAISIANRSYWTRKIHDLCTQHRKVDEALALLDHLRLRGYR 79

Query: 81  PDSLNISSIVHALCEANRFPEAHHRFL 1
           PDSLN+SSI+HALCEANRF EAH RF+
Sbjct: 80  PDSLNLSSIIHALCEANRFNEAHRRFV 106


>ref|XP_002529554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Ricinus communis] gi|223530966|gb|EEF32823.1|
           pentatricopeptide repeat-containing protein, putative
           [Ricinus communis]
          Length = 678

 Score = 81.3 bits (199), Expect = 6e-15
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = -3

Query: 228 KEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVH 49
           ++ Q    + ISITN+++WT++IH LCT+                 G+RPDSLN SSI+H
Sbjct: 42  QQLQQEQEQPISITNSSYWTKKIHLLCTQQRKVDEALTLLDHLRLSGYRPDSLNFSSIIH 101

Query: 48  ALCEANRFPEAHHRFL 1
           ALC+A RF EAHHRFL
Sbjct: 102 ALCDAKRFKEAHHRFL 117


>ref|XP_010274713.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Nelumbo nucifera]
          Length = 709

 Score = 80.1 bits (196), Expect = 2e-14
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
 Frame = -3

Query: 327 QWPNAKILASILSYFPDKPEFSTFAAVQE------IPAAKEAQDTDIELISITNTTHWTR 166
           Q+ + K+  S LS+FP   +F+T+           +    E  +   E +++ N ++W R
Sbjct: 7   QFTSKKLFGS-LSFFP--VQFNTYCQQTTHLTSHLLDKQAEEDEEGEESVNVNNRSYWGR 63

Query: 165 RIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
           +IHRLCT                 RG+RPDSLN+SSI+HALC++NRF EAHHRF+
Sbjct: 64  KIHRLCTIERNVDGALHLLDRLRLRGYRPDSLNLSSIIHALCDSNRFSEAHHRFI 118


>ref|XP_007208935.1| hypothetical protein PRUPE_ppb014337mg, partial [Prunus persica]
           gi|462404670|gb|EMJ10134.1| hypothetical protein
           PRUPE_ppb014337mg, partial [Prunus persica]
          Length = 681

 Score = 79.0 bits (193), Expect = 4e-14
 Identities = 36/72 (50%), Positives = 46/72 (63%)
 Frame = -3

Query: 219 QDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALC 40
           QD D +  SI N ++WT++IH LCT                  G+RPDSLN+SSI+HALC
Sbjct: 34  QDGDQDQTSIDNRSYWTKKIHSLCTAHRNVDQALHLLDRLRLLGYRPDSLNLSSILHALC 93

Query: 39  EANRFPEAHHRF 4
           ++NRF EAHHRF
Sbjct: 94  DSNRFAEAHHRF 105


>ref|XP_008240292.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Prunus mume]
          Length = 691

 Score = 79.0 bits (193), Expect = 4e-14
 Identities = 36/72 (50%), Positives = 46/72 (63%)
 Frame = -3

Query: 219 QDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALC 40
           QD D +  SI N ++WT++IH LCT                  G+RPDSLN+SSI+HALC
Sbjct: 44  QDGDQDQTSIDNRSYWTKKIHTLCTAHRNVDQALHLLDRLRLLGYRPDSLNLSSILHALC 103

Query: 39  EANRFPEAHHRF 4
           ++NRF EAHHRF
Sbjct: 104 DSNRFAEAHHRF 115


>ref|XP_002271048.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Vitis vinifera]
          Length = 680

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = -3

Query: 258 FAAVQEIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRP 79
           F + Q  P  +  ++ + E  SI N   W+R+IH LCT                 RG+RP
Sbjct: 37  FFSAQSTPNQQHEEEKEEE--SIINKAFWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRP 94

Query: 78  DSLNISSIVHALCEANRFPEAHHRFL 1
           DSLN+SSI+HALC+ANRF EAHHR L
Sbjct: 95  DSLNLSSIIHALCDANRFSEAHHRLL 120


>emb|CBI35789.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score = 77.4 bits (189), Expect = 1e-13
 Identities = 39/86 (45%), Positives = 50/86 (58%)
 Frame = -3

Query: 258 FAAVQEIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRP 79
           F + Q  P  +  ++ + E  SI N   W+R+IH LCT                 RG+RP
Sbjct: 269 FFSAQSTPNQQHEEEKEEE--SIINKAFWSRKIHNLCTRDRNVDEALRLLDLLRLRGYRP 326

Query: 78  DSLNISSIVHALCEANRFPEAHHRFL 1
           DSLN+SSI+HALC+ANRF EAHHR L
Sbjct: 327 DSLNLSSIIHALCDANRFSEAHHRLL 352


>ref|XP_010549066.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           isoform X2 [Tarenaya hassleriana]
          Length = 606

 Score = 75.1 bits (183), Expect = 8e-13
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = -3

Query: 288 YFPDKPEFSTFAAVQ----EIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXX 121
           +FP    FS+ + ++    ++  A E+ D +    S+++  +WTRRIH LCT        
Sbjct: 15  FFPKPLSFSSISILESQKNDVEEADESIDAEDHRHSVSDRAYWTRRIHFLCTVRRNPDEA 74

Query: 120 XXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
                    RGF PDSLN++S++HALC+  RF EAH RFL
Sbjct: 75  LRLLDRLCPRGFSPDSLNLNSVIHALCDTGRFAEAHRRFL 114


>ref|XP_010549065.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           isoform X1 [Tarenaya hassleriana]
          Length = 683

 Score = 75.1 bits (183), Expect = 8e-13
 Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
 Frame = -3

Query: 288 YFPDKPEFSTFAAVQ----EIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXX 121
           +FP    FS+ + ++    ++  A E+ D +    S+++  +WTRRIH LCT        
Sbjct: 15  FFPKPLSFSSISILESQKNDVEEADESIDAEDHRHSVSDRAYWTRRIHFLCTVRRNPDEA 74

Query: 120 XXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
                    RGF PDSLN++S++HALC+  RF EAH RFL
Sbjct: 75  LRLLDRLCPRGFSPDSLNLNSVIHALCDTGRFAEAHRRFL 114


>ref|XP_011008804.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Populus euphratica]
          Length = 671

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
 Frame = -3

Query: 282 PDKPEFSTFAAVQEIPAAKEAQDTDI----ELISITNTTHWTRRIHRLCTEXXXXXXXXX 115
           P KP+ S  + +   P ++  Q+  +    + I ITN ++WT++IH LCT+         
Sbjct: 15  PFKPKLSPLSFLSTHPESQPHQELALIHQQQSICITNRSYWTKKIHDLCTKHHNVDEALR 74

Query: 114 XXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
                  RG+ PDSLN+SSI+H LC+ANRF EAH R +
Sbjct: 75  LLDHLRLRGYLPDSLNLSSIIHGLCDANRFSEAHQRLI 112


>ref|XP_009785057.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Nicotiana sylvestris]
          Length = 696

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 37/75 (49%), Positives = 46/75 (61%)
 Frame = -3

Query: 225 EAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHA 46
           EAQ+ +I    I + T+WTRRIH+LC                   G+ PDSLN+SSIVHA
Sbjct: 48  EAQEFEIGRNLIDDKTYWTRRIHKLCAIDGNVDEALRLLDELRLHGYHPDSLNLSSIVHA 107

Query: 45  LCEANRFPEAHHRFL 1
           LC+A+RF EAH RFL
Sbjct: 108 LCDAHRFSEAHQRFL 122


>ref|XP_010097570.1| hypothetical protein L484_017380 [Morus notabilis]
           gi|587880145|gb|EXB69102.1| hypothetical protein
           L484_017380 [Morus notabilis]
          Length = 714

 Score = 74.7 bits (182), Expect = 1e-12
 Identities = 33/69 (47%), Positives = 45/69 (65%)
 Frame = -3

Query: 207 IELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANR 28
           +E +S+ + ++WT+ IH LCT                 RG+RPDSLN+SSIVHALC++NR
Sbjct: 58  LEQVSVDDKSYWTKTIHNLCTRHRNVDEALCLLDRLSLRGYRPDSLNLSSIVHALCDSNR 117

Query: 27  FPEAHHRFL 1
           F EAHHR +
Sbjct: 118 FDEAHHRLI 126


>ref|XP_002322098.1| hypothetical protein POPTR_0015s04490g [Populus trichocarpa]
           gi|222869094|gb|EEF06225.1| hypothetical protein
           POPTR_0015s04490g [Populus trichocarpa]
          Length = 668

 Score = 73.9 bits (180), Expect = 2e-12
 Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
 Frame = -3

Query: 282 PDKPEFSTFAAVQEIPAAKE-AQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXX 106
           P KP+ S  + +   P  +E A +   + I ITN ++WT++IH LCT+            
Sbjct: 15  PFKPKLSPLSFLSTHPQNQEQALNHQQQSICITNRSYWTQKIHDLCTKHRNVDEALRLLD 74

Query: 105 XXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
               RG+ PDSLN+SSI+H LC+ANRF EAH R +
Sbjct: 75  HLRLRGYLPDSLNLSSIIHGLCDANRFNEAHQRLI 109


>ref|XP_009596989.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Nicotiana tomentosiformis]
          Length = 696

 Score = 73.2 bits (178), Expect = 4e-12
 Identities = 36/82 (43%), Positives = 48/82 (58%)
 Frame = -3

Query: 246 QEIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLN 67
           Q+   + E Q+ +I    I + T+WTRRIH+LC                   G+RPDSLN
Sbjct: 41  QQQQQSAETQEFEIGRNLIDDRTYWTRRIHKLCAIDGNVNEALRLLDELRLHGYRPDSLN 100

Query: 66  ISSIVHALCEANRFPEAHHRFL 1
           ++SIVHALC+ +RF EAH RFL
Sbjct: 101 LTSIVHALCDTHRFSEAHQRFL 122


>ref|XP_007036793.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508774038|gb|EOY21294.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 690

 Score = 72.8 bits (177), Expect = 5e-12
 Identities = 32/64 (50%), Positives = 40/64 (62%)
 Frame = -3

Query: 192 ITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAH 13
           ITN  +W  +IH LCT+                 G+RPD LN+SSI+HALC++NRF EAH
Sbjct: 51  ITNKPYWATKIHNLCTKHRNVDEAISLLDTLCLHGYRPDYLNLSSIIHALCDSNRFSEAH 110

Query: 12  HRFL 1
           HRFL
Sbjct: 111 HRFL 114


>gb|KVI01449.1| Pentatricopeptide repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 693

 Score = 71.6 bits (174), Expect = 1e-11
 Identities = 38/99 (38%), Positives = 52/99 (52%)
 Frame = -3

Query: 297 ILSYFPDKPEFSTFAAVQEIPAAKEAQDTDIELISITNTTHWTRRIHRLCTEXXXXXXXX 118
           I S+F +   F+ F     +   +  +       SITN ++WTRRIH+LC          
Sbjct: 13  ITSHFYNHSNFALFFTHSTLCDEERQEQRHPLEESITNRSYWTRRIHKLCAIDHNVDEAI 72

Query: 117 XXXXXXXXRGFRPDSLNISSIVHALCEANRFPEAHHRFL 1
                    G+  DSLN+SSI+HALC++NRF EAH RFL
Sbjct: 73  RLVDNLCIHGYHLDSLNLSSIIHALCDSNRFAEAHRRFL 111


>ref|XP_004301253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18020
           [Fragaria vesca subsp. vesca]
          Length = 682

 Score = 70.5 bits (171), Expect = 3e-11
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = -3

Query: 207 IELISITNTTHWTRRIHRLCTEXXXXXXXXXXXXXXXXRGFRPDSLNISSIVHALCEANR 28
           ++ IS+ NT +WT+ IH LCT                 RG+RP  LN++SIVHALC+++R
Sbjct: 36  LDQISVDNTPYWTKTIHHLCTRHRNVDQALHLLDHLHLRGYRPVPLNLTSIVHALCDSHR 95

Query: 27  FPEAHHRF 4
           F EAHHRF
Sbjct: 96  FDEAHHRF 103