BLASTX nr result
ID: Rehmannia27_contig00009083
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00009083
(691 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP33681.1| Retrovirus-related Pol polyprotein from transposo... 182 1e-51
gb|KYP72819.1| Retrovirus-related Pol polyprotein from transposo... 183 4e-50
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 173 5e-46
gb|KYP72066.1| Copia protein [Cajanus cajan] 161 1e-45
gb|KYP55677.1| Retrovirus-related Pol polyprotein from transposo... 165 3e-45
gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 168 2e-44
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 168 2e-44
gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 168 2e-44
gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 162 2e-42
gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Ar... 160 9e-42
ref|XP_010544446.1| PREDICTED: uncharacterized protein LOC104817... 159 3e-41
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 159 3e-41
ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868... 159 3e-41
gb|KYP71076.1| Retrovirus-related Pol polyprotein from transposo... 151 7e-41
ref|XP_013617128.1| PREDICTED: uncharacterized protein LOC106323... 157 7e-41
ref|XP_013617918.1| PREDICTED: uncharacterized protein LOC106324... 155 9e-41
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 157 1e-40
emb|CDY09583.1| BnaC05g23360D [Brassica napus] 155 5e-40
ref|XP_010444961.1| PREDICTED: uncharacterized protein LOC104727... 155 9e-40
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 154 1e-39
>gb|KYP33681.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 473
Score = 182 bits (463), Expect = 1e-51
Identities = 112/246 (45%), Positives = 133/246 (54%), Gaps = 16/246 (6%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
ALQTAAYLINRMPT L SP +LF PNY KLR+FGCLCF WL PYT NKL KS
Sbjct: 210 ALQTAAYLINRMPTRRLHMKSPLQVLFGCVPNYIKLRIFGCLCFAWLTPYTPNKLVPKSK 269
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPT 361
CVFLGYSPTQSAY C DP K +TSRHVQFVED FP+S LT + S+ + +
Sbjct: 270 LCVFLGYSPTQSAYYCLDPQPSKIFTSRHVQFVEDIFPYSSPLTSSAPHDSTSNLNLLQS 329
Query: 362 SRLPLPL------SITHHPPSPPCLPQDQATTSN---------SDNLTPSMSLPESPQHS 496
+ P PL +ITH PP P +++ N S NL+PS S P SP
Sbjct: 330 PQQPAPLIPSQPLAITHPIQQPPSSPNILSSSFNQAPVLDPSPSSNLSPSSS-PISPYVP 388
Query: 497 AXXXXXXXXXXXXXXXXXXXXXXXXXXXEHLNTSSSVRISPLAE-EPAPRATHPMTTRSR 673
+ E+ +S + P AP++THPMTTRS+
Sbjct: 389 SPHPSSTPATSIN---------------EYTLSSPLASVDPPPPCSSAPKSTHPMTTRSK 433
Query: 674 NGIFKP 691
NGIFKP
Sbjct: 434 NGIFKP 439
>gb|KYP72819.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 814
Score = 183 bits (465), Expect = 4e-50
Identities = 108/237 (45%), Positives = 132/237 (55%), Gaps = 7/237 (2%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A QTAAYLINRMPT L +P LF PNYSKLR FGCLCFPWL PYT +KL KS
Sbjct: 320 AFQTAAYLINRMPTLSLHMKTPLQTLFNCLPNYSKLRTFGCLCFPWLVPYTNSKLLPKSQ 379
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPT 361
PC+FLGYSPTQSAY+C++ S+ K YTS HVQFVE+ FP P S+S +S +P+
Sbjct: 380 PCIFLGYSPTQSAYICYNSSTKKFYTSLHVQFVENIFP-----NPVQSSSYSSSTPPYPS 434
Query: 362 SRLPLPLSITHHPPSP--PCLPQDQATTSNSDNLTPSMSLPESPQHSAXXXXXXXXXXXX 535
LPLS+TH+ P P P P + S TP+ LP+S +A
Sbjct: 435 P--ILPLSLTHNSPEPVNPTTPNSSTAPAPS---TPTSPLPDSSTTTA------------ 477
Query: 536 XXXXXXXXXXXXXXXEHLNTSSSV-----RISPLAEEPAPRATHPMTTRSRNGIFKP 691
L T SS+ SP+ +P P ++HPM TR +NGIFKP
Sbjct: 478 ----------SATPSHDLYTDSSIPSVAAEPSPVVPDPVPISSHPMITRPKNGIFKP 524
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 173 bits (438), Expect = 5e-46
Identities = 108/262 (41%), Positives = 133/262 (50%), Gaps = 32/262 (12%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINR+P+SVL N SP+ LF+ PNY KLRVFGC CFPWL PYT +KL+ +S
Sbjct: 746 AFGTAVYLINRLPSSVLNNESPYSKLFKTSPNYLKLRVFGCSCFPWLRPYTNHKLERRSQ 805
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFS---HHLTPPSSASLASHNHN 352
PCVFLGYS TQSAYLC D SSG+ YTSRHVQFVED FPFS H SS AS + +
Sbjct: 806 PCVFLGYSLTQSAYLCLDRSSGRVYTSRHVQFVEDQFPFSISDTHSVSNSSPEEASPSCH 865
Query: 353 FPTSRLPLPLS---ITHHPPSPPCLPQD-----QATTSNSDNLT---------------- 460
P SR+P+ S + P S P L D A TS+S + T
Sbjct: 866 QPPSRIPIQSSSPPLVQAPSSLPPLSSDSHRRPNAETSSSSSSTNNDVVVSKDNTQVDNR 925
Query: 461 -----PSMSLPESPQHSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEHLNTSSSVRISPLA 625
P+ S Q+++ +++S+ P
Sbjct: 926 NNFIGPTSSSSAQSQNNSNPSSSIQTQNEPNPSPSPTPQNSSPESSPSSSTSATSTVPNP 985
Query: 626 EEPAPRATHPMTTRSRNGIFKP 691
P P HPM TR++N I KP
Sbjct: 986 PPPPPTNNHPMRTRAKNHITKP 1007
>gb|KYP72066.1| Copia protein [Cajanus cajan]
Length = 274
Score = 161 bits (408), Expect = 1e-45
Identities = 83/151 (54%), Positives = 100/151 (66%)
Frame = +2
Query: 35 MPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSIPCVFLGYSPTQ 214
MPT+VL +PF+ LF PPNYSKLRVFGCLCFPWL PYTTNKLQ+KS PC+FLGYSPTQ
Sbjct: 1 MPTTVLNMATPFEKLFHSPPNYSKLRVFGCLCFPWLGPYTTNKLQAKSKPCIFLGYSPTQ 60
Query: 215 SAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPTSRLPLPLSITH 394
SAYLC++ S YTSRHV F+ED+FP + ++PP + S +PL IT+
Sbjct: 61 SAYLCYNLESKNLYTSRHVTFIEDTFPHASLISPPKNPS------------IPLIPPITN 108
Query: 395 HPPSPPCLPQDQATTSNSDNLTPSMSLPESP 487
S P LP T SN D + S+S P P
Sbjct: 109 KSISQPFLP----TLSNQDPMHHSLSNPIIP 135
>gb|KYP55677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 435
Score = 165 bits (417), Expect = 3e-45
Identities = 101/236 (42%), Positives = 126/236 (53%), Gaps = 6/236 (2%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A+QTAAYLINR+PT L SP+ LF + PNY+KL+ FGCLCFPWL PYTTNKLQ S
Sbjct: 151 AVQTAAYLINRLPTPTLNMNSPYCTLFHNQPNYTKLKSFGCLCFPWLKPYTTNKLQPHSE 210
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNF-- 355
PCVFLGYS TQSAY+C+ K Y SRHVQF ED +PFS T +S S SH N
Sbjct: 211 PCVFLGYSQTQSAYICYSLKQHKFYHSRHVQFSEDVYPFSQ--TNSTSQSHESHTLNSLD 268
Query: 356 PTSRLPLPLSITHHPPSPPCL---PQDQATTSNSDNLT-PSMSLPESPQHSAXXXXXXXX 523
S LPL+I H P L PQ ++T+ ++ PS +L P
Sbjct: 269 NNSLHSLPLTILHKPQPHSTLIHNPQPTSSTATESSIPHPSPNLITLPH----------- 317
Query: 524 XXXXXXXXXXXXXXXXXXXEHLNTSSSVRISPLAEEPAPRATHPMTTRSRNGIFKP 691
+ ++ L +P +THPM TRS++GI+KP
Sbjct: 318 ----------------------SDPQQPPLTQLPLQPLTSSTHPMQTRSKSGIYKP 351
>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 168 bits (425), Expect = 2e-44
Identities = 88/164 (53%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRM T VL N SP+ LF PPNY KLR+FGCLCFPWL PYT +KL ++S+
Sbjct: 655 AFATAVYLINRMLTPVLGNESPYVKLFGQPPNYLKLRIFGCLCFPWLRPYTAHKLDNRSV 714
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPF---SHHLTPPSSASLASHNHN 352
PCV LGYS +QSAYLC D ++G+ YTSRHVQF E SFPF S +TPPS L+
Sbjct: 715 PCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTTSPSVTPPSDPPLSQDTRP 774
Query: 353 FPTSRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPES 484
L PL T PPS P + S S+NL+P L S
Sbjct: 775 VSVPLLARPL--TTAPPSSPSCSAPHRSPSQSENLSPPAPLQPS 816
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 168 bits (425), Expect = 2e-44
Identities = 88/164 (53%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRM T VL N SP+ LF PPNY KLR+FGCLCFPWL PYT +KL ++S+
Sbjct: 655 AFATAVYLINRMLTPVLGNESPYVKLFGQPPNYLKLRIFGCLCFPWLRPYTAHKLDNRSV 714
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPF---SHHLTPPSSASLASHNHN 352
PCV LGYS +QSAYLC D ++G+ YTSRHVQF E SFPF S +TPPS L+
Sbjct: 715 PCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTTSPSVTPPSDPPLSQDTRP 774
Query: 353 FPTSRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPES 484
L PL T PPS P + S S+NL+P L S
Sbjct: 775 VSVPLLARPL--TTAPPSSPSCSAPHRSPSQSENLSPPAPLQPS 816
>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 168 bits (425), Expect = 2e-44
Identities = 88/164 (53%), Positives = 103/164 (62%), Gaps = 3/164 (1%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRM T VL N SP+ LF PPNY KLR+FGCLCFPWL PYT +KL ++S+
Sbjct: 655 AFATAVYLINRMLTPVLGNESPYVKLFGQPPNYLKLRIFGCLCFPWLRPYTAHKLDNRSV 714
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPF---SHHLTPPSSASLASHNHN 352
PCV LGYS +QSAYLC D ++G+ YTSRHVQF E SFPF S +TPPS L+
Sbjct: 715 PCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESSFPFSTTSPSVTPPSDPPLSQDTRP 774
Query: 353 FPTSRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPES 484
L PL T PPS P + S S+NL+P L S
Sbjct: 775 VSVPLLARPL--TTAPPSSPSCSAPHRSPSQSENLSPPAPLQPS 816
>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
Length = 1390
Score = 162 bits (411), Expect = 2e-42
Identities = 88/168 (52%), Positives = 101/168 (60%), Gaps = 3/168 (1%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRM T VL N SP+ LF PPNY KLRVFGCLCFPWL PYT +KL ++S+
Sbjct: 655 AFTTAVYLINRMLTPVLGNESPYMKLFGQPPNYLKLRVFGCLCFPWLRPYTAHKLDNRSM 714
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPF---SHHLTPPSSASLASHNHN 352
PCV LGYS +QSAYLC D ++G+ YTSRHVQF E FPF S +TPPS L+
Sbjct: 715 PCVLLGYSLSQSAYLCLDRATGRVYTSRHVQFAESIFPFSTTSPSVTPPSDPPLSQDTRP 774
Query: 353 FPTSRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPESPQHS 496
L PL T PPS P + S L+PS SP S
Sbjct: 775 ISVPILARPL--TTAPPSSPSCSAPHRSPSQPGILSPSAPFQPSPPSS 820
>gb|KFK45117.1| hypothetical protein AALP_AA1G346500, partial [Arabis alpina]
Length = 1203
Score = 160 bits (406), Expect = 9e-42
Identities = 86/170 (50%), Positives = 101/170 (59%), Gaps = 8/170 (4%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRMPT VL SP LF PNYSKLRVFGCLCFPWL PY TNKLQ +S
Sbjct: 657 AFTTATYLINRMPTPVLDMESPVQKLFGSQPNYSKLRVFGCLCFPWLRPYNTNKLQDRST 716
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPS-SASLASHNHNFP 358
PC+F+GYS TQSAYLC PSSG+ Y +RHV+F E SFPF+ +TP + A +
Sbjct: 717 PCIFIGYSQTQSAYLCLQPSSGRVYITRHVKFDESSFPFNKLITPKTIPAQTNATTQPLQ 776
Query: 359 TSRLPLPLSITHHPPSPPCLPQDQATTSNSD-------NLTPSMSLPESP 487
+PL+ H PP + Q ++SD T S LP SP
Sbjct: 777 PIITTIPLTPPRHLTQPPLVRTTQLVPTSSDLHQPASPPSTTSPVLPSSP 826
>ref|XP_010544446.1| PREDICTED: uncharacterized protein LOC104817067 [Tarenaya
hassleriana]
Length = 772
Score = 159 bits (401), Expect = 3e-41
Identities = 98/231 (42%), Positives = 119/231 (51%), Gaps = 1/231 (0%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
AL TA YLINR+P+SVL SPF+ILF PNYSKLRVFGCLC+PWL PY +KL KS
Sbjct: 522 ALTTATYLINRLPSSVLGMSSPFEILFHSSPNYSKLRVFGCLCYPWLRPYAPHKLAPKST 581
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPT 361
PCVFLGYS +QSAY C D SS + + SRHV F E SFPF++ +S+S + F
Sbjct: 582 PCVFLGYSLSQSAYFCLDLSSSRLFVSRHVVFHESSFPFANRGLLSASSSSSESFEPFRP 641
Query: 362 SRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPESPQHSAXXXXXXXXXXXXXX 541
S +P +T P SPP + S E P H+
Sbjct: 642 SFMPSASRVT--PYSPP---------------VSTASFGEPPCHAPSPLEAEDVSLLPMA 684
Query: 542 XXXXXXXXXXXXXEHLNTSSSVRISPLAEEPAP-RATHPMTTRSRNGIFKP 691
N+ +V P A P+P R HPMTTR +N I KP
Sbjct: 685 DTECDRLP--------NSLPTVEEEPAALVPSPTRNRHPMTTRGKNNIVKP 727
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 159 bits (402), Expect = 3e-41
Identities = 110/269 (40%), Positives = 136/269 (50%), Gaps = 39/269 (14%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRMPT VL+ SP+ LF+ PNY KLRVFGCLC+PWL PY TNKL+++S
Sbjct: 636 AFATAVYLINRMPTEVLQGTSPYVKLFQMSPNYLKLRVFGCLCYPWLRPYNTNKLEARST 695
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSAS---------- 331
CVFLGYS TQSAYLC D ++ + YTSRHVQFVE SFPF+ T + ++
Sbjct: 696 MCVFLGYSLTQSAYLCLDIATNRIYTSRHVQFVESSFPFASPRTSETDSTQTMSQPTTTN 755
Query: 332 ----LASHNHNFPTSRLPLPLSITHHPP-------SPPC--LPQDQATTS----NSDNLT 460
L H P + LPL I H PP SPP +P A++S N DN++
Sbjct: 756 VIPLLQRPPHIAPPTALPL-CPIFHSPPHSPSSPASPPSEHVPLTAASSSSNAINDDNIS 814
Query: 461 P----SMSLPESPQ-HSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEHLNTS---SSVRIS 616
S+S P S H+ TS S S
Sbjct: 815 STGQVSVSGPTSQSPHTTPTNQNTSPLSKSPNPTNTNQSQNSTPPTSPTTSVHQHSPTPS 874
Query: 617 PLAEE----PAPRATHPMTTRSRNGIFKP 691
PL + P P+ HPM TR++N I KP
Sbjct: 875 PLPQNPPLPPPPQNDHPMRTRAKNQITKP 903
>ref|XP_009145096.1| PREDICTED: uncharacterized protein LOC103868780 [Brassica rapa]
Length = 2690
Score = 159 bits (402), Expect = 3e-41
Identities = 104/252 (41%), Positives = 125/252 (49%), Gaps = 22/252 (8%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A A YLINRMP+ V +NVSP+ LF PNY KLRVFG LCFPWL PY NKL +SI
Sbjct: 1337 AFAAAVYLINRMPSPVTQNVSPYAKLFGQQPNYQKLRVFGSLCFPWLRPYAQNKLDVRSI 1396
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPT 361
PCVFLGYS TQS+Y+C DP + + Y+SRHVQF+ED+FPF T PS+ S S P
Sbjct: 1397 PCVFLGYSLTQSSYICLDPKTQRLYSSRHVQFLEDTFPFRTQ-TSPSAPSHPSPEPEHPA 1455
Query: 362 SRLP----LPLSITHHPPSPPCLPQDQ-----ATTSNS----DNLTPSMSLPESPQHSAX 502
S P +PL T PPC Q Q + NS +N +PS+ +S +
Sbjct: 1456 SSNPELIVVPLGQT-RSTVPPCSVQHQNLQQSLSPMNSPVSPENASPSIPSSDSTRGDQM 1514
Query: 503 XXXXXXXXXXXXXXXXXXXXXXXXXXEHLNT---------SSSVRISPLAEEPAPRATHP 655
E + T S S S PAP H
Sbjct: 1515 GSERSTGMFPHPLSTNTEPTNVNLPSEPVPTNVPQPPNSPSQSGTQSQNPAPPAPPNQHS 1574
Query: 656 MTTRSRNGIFKP 691
M TRS+N I KP
Sbjct: 1575 MKTRSKNNIIKP 1586
>gb|KYP71076.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 337
Score = 151 bits (381), Expect = 7e-41
Identities = 90/170 (52%), Positives = 99/170 (58%), Gaps = 19/170 (11%)
Frame = +2
Query: 35 MPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSIPCVFLGYSPTQ 214
MPT L SP +LF PNY KL++FGCLCFPWL PYT NKL KS PCVFLGY PTQ
Sbjct: 1 MPTRRLHMKSPLQVLFGCVPNYIKLQIFGCLCFPWLTPYTPNKLVPKSKPCVFLGYIPTQ 60
Query: 215 SAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLT---PPSSASLASHNHNF---PTSRLPL 376
SAY C DP S K +TSRHVQFVED FP+S LT PP S S N N P PL
Sbjct: 61 SAYYCLDPQSSKIFTSRHVQFVEDIFPYSSPLTSSAPPDSTS----NLNLLQTPQQPAPL 116
Query: 377 ----PLSITHHPPSPPCLPQDQATTSN---------SDNLTPSMSLPESP 487
PL+ITH PP P +++ N S NL PS S P SP
Sbjct: 117 IPSQPLAITHPIQQPPSSPNILSSSFNQAPVLDPSPSSNLAPSSS-PISP 165
>ref|XP_013617128.1| PREDICTED: uncharacterized protein LOC106323577 [Brassica oleracea
var. oleracea]
Length = 803
Score = 157 bits (398), Expect = 7e-41
Identities = 96/233 (41%), Positives = 125/233 (53%), Gaps = 3/233 (1%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA +LINR+PT +L N+SP+ LF + PNY KLR FGCLCFPWL PY NKL+++S
Sbjct: 194 AFPTAVFLINRLPTPILSNISPYQKLFGNSPNYHKLRTFGCLCFPWLRPYAPNKLENRSS 253
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSS---ASLASHNHN 352
PCVF+GYS TQSAY C +P SG+ + SRHV+F E FPF+ LT PSS S
Sbjct: 254 PCVFVGYSLTQSAYQCLEPVSGRLHISRHVRFNETQFPFA-QLTKPSSFVPNDYVSSPSF 312
Query: 353 FPTSRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPESPQHSAXXXXXXXXXXX 532
P + +P+P S+ P + D S+S + +P+ S S +SA
Sbjct: 313 TPFTTVPVPQSLI----QSPLVSLD--NQSSSRDASPTTSQQSSSGNSATAPEPEPAPIL 366
Query: 533 XXXXXXXXXXXXXXXXEHLNTSSSVRISPLAEEPAPRATHPMTTRSRNGIFKP 691
++V P ++ APR H MTTRSRN I KP
Sbjct: 367 SSPTPVSQASEAESPDRDSTAQAAV---PEPQQEAPR--HSMTTRSRNNIVKP 414
>ref|XP_013617918.1| PREDICTED: uncharacterized protein LOC106324503 [Brassica oleracea
var. oleracea] gi|923751115|ref|XP_013674458.1|
PREDICTED: uncharacterized protein LOC106378962
[Brassica napus]
Length = 592
Score = 155 bits (393), Expect = 9e-41
Identities = 79/164 (48%), Positives = 102/164 (62%), Gaps = 6/164 (3%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A T YLINR+PT VL +P LF PNYSK R+FG LCFPWL PYT +KL+ +S
Sbjct: 389 AFATVNYLINRLPTPVLNMDTPLHKLFVTHPNYSKTRIFGSLCFPWLRPYTIHKLKDRST 448
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPT 361
PCVF+GYSPTQSAYLC PS+G+ Y SRHV+F E FPF L PP + H+ P
Sbjct: 449 PCVFIGYSPTQSAYLCLQPSTGRIYVSRHVRFGESVFPFHKLLAPPPKPETSPPYHSPPV 508
Query: 362 SRLPLPLSITHHPPSPPCLPQDQATTSNS------DNLTPSMSL 475
+++ H P+PP + Q +T+S+ D+ TPS+S+
Sbjct: 509 TKI--------HFPTPPLVQQTGSTSSSPHSSEQVDSTTPSLSV 544
>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
polyprotein from Arabidopsis arenosa [Arabidopsis
thaliana]
Length = 1194
Score = 157 bits (397), Expect = 1e-40
Identities = 86/174 (49%), Positives = 108/174 (62%), Gaps = 8/174 (4%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A A YLINRM + V+ +SP+ LF PNY KLRVFGCLCFPWL PYTT+KL +
Sbjct: 610 AFTIAIYLINRMSSDVIGGISPYKRLFGQAPNYLKLRVFGCLCFPWLRPYTTHKLDDRPA 669
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSSASLASHNHNFPT 361
PCVFLGYS TQSAYLC + ++G+ YTSRHVQFVE+++PF+ P + S+NH+ T
Sbjct: 670 PCVFLGYSQTQSAYLCLNRTTGRVYTSRHVQFVENTYPFTKPTLDPFTNLEESNNHSI-T 728
Query: 362 SRLPLP--LSITHHPP---SPPCLPQDQATTSNSDNLTPSMSLP---ESPQHSA 499
+ +P P + + PP P P Q S S PSMS P SPQ S+
Sbjct: 729 TTVPSPPFVQLPSVPPPTRDPHQPPPSQPAPSPSPLSPPSMSSPVMTSSPQFSS 782
>emb|CDY09583.1| BnaC05g23360D [Brassica napus]
Length = 1187
Score = 155 bits (393), Expect = 5e-40
Identities = 96/250 (38%), Positives = 123/250 (49%), Gaps = 25/250 (10%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A+ A YLINRMP+ V +SPF LF PNY+KLRVFGCLCFPWL PYT +KL+++S
Sbjct: 357 AVNAAVYLINRMPSPVTEMLSPFQKLFNKSPNYAKLRVFGCLCFPWLRPYTKHKLENRST 416
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPSS--ASLASHNHNF 355
PCVFLGYS +QSAYLC ++G+ Y SRHVQF E +FPF+ +P LA NH
Sbjct: 417 PCVFLGYSLSQSAYLCLQQATGRVYVSRHVQFDETTFPFTQSTSPKPDPPTPLAQSNHP- 475
Query: 356 PTSRLPLPLSITHHPPSPP-----CLPQDQATTSNSDN-----LTPSMSLPESPQHSAXX 505
P S +PL + P P LP Q+ +DN + PS SP +
Sbjct: 476 PVSFVPLNSPLNSSPSVVPGFPATDLPPQQSHEETNDNNGDSQVCPSKPTSPSPGPTTTP 535
Query: 506 XXXXXXXXXXXXXXXXXXXXXXXXXEHLNTSSSVR--------ISPLA-----EEPAPRA 646
+N SPL+ +P P++
Sbjct: 536 NSSAHQNPTILNPPTLAHTNPNTTQAQINPPPETHSPPPRQTDTSPLSPTVDNPQPPPQS 595
Query: 647 THPMTTRSRN 676
HPMTTR R+
Sbjct: 596 HHPMTTRQRS 605
>ref|XP_010444961.1| PREDICTED: uncharacterized protein LOC104727565 [Camelina sativa]
Length = 1214
Score = 155 bits (391), Expect = 9e-40
Identities = 106/279 (37%), Positives = 133/279 (47%), Gaps = 49/279 (17%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A TA YLINRM T VL +VSP+ LF PNY KLRVFGCLCFPWL PY +KL ++S+
Sbjct: 546 AFSTAVYLINRMLTPVLGDVSPYAKLFGQQPNYQKLRVFGCLCFPWLRPYAAHKLDNRSL 605
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFS-------------------H 304
CVFLGYS TQSAY CF +G+ YTSRHV+FVE+SFPF+ H
Sbjct: 606 DCVFLGYSLTQSAYFCFHRPTGRIYTSRHVRFVEESFPFAMSSSTITTSVSVPEVTAGVH 665
Query: 305 HLT----------PPSSASLA---SHNHNFPT-SRLPLPLSITHHPPSPPCLPQDQATT- 439
H PPS +SL+ S +H + P P ++ PP+ P P ++T
Sbjct: 666 HSVVPLRSLATPPPPSLSSLSPPRSDSHPMASPPPTPAPSPVSSVPPTSPLSPAHPSSTG 725
Query: 440 -SNSDNLTPSM-SLPESPQHSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEHLNTSSSVRI 613
+ +L P+ S P SP H +T SS+
Sbjct: 726 LDSRSSLGPTTNSTPSSPN-------------LPSTAQSPLSRSPTNSSTHSSTPSSLSS 772
Query: 614 SPLAEEPAPRAT-------------HPMTTRSRNGIFKP 691
S A P P + HPM TRS+N I KP
Sbjct: 773 SSHASPPQPVPSLIPASPPPPLVNQHPMQTRSKNHIVKP 811
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 154 bits (390), Expect = 1e-39
Identities = 95/244 (38%), Positives = 122/244 (50%), Gaps = 14/244 (5%)
Frame = +2
Query: 2 ALQTAAYLINRMPTSVLRNVSPFDILFRHPPNYSKLRVFGCLCFPWLAPYTTNKLQSKSI 181
A AAYLINR+PT +L++ SPF+ LF+H PNY KLR FGCLCFPW+ PY+ +KL +S
Sbjct: 639 AFLAAAYLINRLPTPILKHQSPFESLFQHMPNYDKLRAFGCLCFPWMRPYSDHKLDKRSK 698
Query: 182 PCVFLGYSPTQSAYLCFDPSSGKTYTSRHVQFVEDSFPFSHHLTPPS-----------SA 328
PCVFLGYS T +AY C D SS + Y SRHVQF+E FPF+ + TP S
Sbjct: 699 PCVFLGYSNTHNAYKCLDLSSNRVYISRHVQFIEHKFPFASNTTPTDLBQAISTWSSCSP 758
Query: 329 SLASHNHNF---PTSRLPLPLSITHHPPSPPCLPQDQATTSNSDNLTPSMSLPESPQHSA 499
+LA+ +F PTS P H PS +Q S +L+P+ S P + SA
Sbjct: 759 ALAAIQPSFFVVPTSSKSFP----HQAPSCTNTGPNQELIS---SLSPTSSSPPTTA-SA 810
Query: 500 XXXXXXXXXXXXXXXXXXXXXXXXXXXEHLNTSSSVRISPLAEEPAPRATHPMTTRSRNG 679
+ S S P P P +H + TRS+N
Sbjct: 811 PLSACDAPPRYDLSLSSLPVSFDSSNISSPSLSLSPPTQPQGSNPLPEPSHRIVTRSQNN 870
Query: 680 IFKP 691
I P
Sbjct: 871 IHCP 874