BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00008344
         (3687 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...  1434   0.0  
ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polyme...  1420   0.0  
ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polyme...  1273   0.0  
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythra...  1211   0.0  
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]  1053   0.0  
ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polyme...  1014   0.0  
ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polyme...  1005   0.0  
ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polyme...  1004   0.0  
emb|CDP03267.1| unnamed protein product [Coffea canephora]           1001   0.0  
ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polyme...   997   0.0  
ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polyme...   976   0.0  
ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA...   965   0.0  
ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polyme...   951   0.0  
ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polyme...   951   0.0  
ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polyme...   946   0.0  
ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polyme...   942   0.0  
ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polyme...   927   0.0  
emb|CDP03268.1| unnamed protein product [Coffea canephora]            927   0.0  
ref|XP_015059191.1| PREDICTED: probable RNA-dependent RNA polyme...   924   0.0  
ref|XP_009760372.1| PREDICTED: probable RNA-dependent RNA polyme...   913   0.0  

>ref|XP_012845534.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            5 [Erythranthe guttata]
          Length = 1040

 Score = 1434 bits (3711), Expect = 0.0
 Identities = 719/1039 (69%), Positives = 843/1039 (81%), Gaps = 5/1039 (0%)
 Frame = +2

Query: 179  HQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFS 358
            +Q +RLP+ +E  I+ IC EKNQPPLK YARKMLAEIGEQASME+LT ILSS + I SFS
Sbjct: 9    NQDIRLPKKVEMTIQTICLEKNQPPLKNYARKMLAEIGEQASMEVLTEILSSNQPIKSFS 68

Query: 359  GYVSYLIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXX 538
            G+VS+++K+DY ++AA VL+AY S   S Q+Q+M SPSS SP+      NGE        
Sbjct: 69   GFVSFMVKKDYPVQAAAVLAAYDSS--SPQSQKMWSPSSTSPHTR----NGENLESPLSR 122

Query: 539  XXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSV-KRQSSLAGEHREVAESTTVSQQL 715
                        T  QS+ C LSF+DETQE RS +    Q S+     EV E  T++QQL
Sbjct: 123  LSMNSITSNLHSTSPQSVGCRLSFEDETQENRSPNCGTSQPSVP----EVKEPITITQQL 178

Query: 716  MVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCD 895
            + LNKLEYRKLFLVLSYIGR+KLE VVT++ A+EI+ M + PM+ FE+KIW  YGQ+F D
Sbjct: 179  ITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKKYGQRFYD 238

Query: 896  KSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDG 1075
            +SDRSQYL WDSGKTH+Y CHV +DG YYFKGPYLNS + HLQRSLGDD IL VKFLEDG
Sbjct: 239  ESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDDNILIVKFLEDG 298

Query: 1076 AYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPY 1255
            A+ T  I +EGILVG  RYRFFVFKD+RK+V KN+ + EKKA+YS V+C+FVR+DSV P 
Sbjct: 299  AFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFFVRVDSVSPS 358

Query: 1256 GDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIED 1435
            G D NYILS K I EAR  FMHI+ +S+IEK MAR SLILSK+IKLE++LA   +E I+D
Sbjct: 359  GYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLAAVIIEKIKD 418

Query: 1436 IPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNS 1603
            IPFQDE G +IHDEDGKPILHTDGTGYISEDLA++C   FS  KY  D+ FE      + 
Sbjct: 419  IPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRFEKNDHFADF 478

Query: 1604 GDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDE 1783
             D A Q R AE+RNKE PLL+QCR+FH GYAVKGTLLVNRKLEPGTIQIRPSMIKVERD 
Sbjct: 479  ADIASQVREAESRNKEAPLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDH 538

Query: 1784 KVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSN 1963
             +  EE FNSLEIV IS++P RN LSKYLIALLSYGGVPQEFFLNL+ N LE+ RNVY+N
Sbjct: 539  NIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVANTLEDARNVYTN 598

Query: 1964 RRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISES 2143
            RRAALRVASNH GLD+ F+A+RMI +GVPL+EPYLQLCLSNLE GEKTKLK GKIP++ES
Sbjct: 599  RRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLNES 658

Query: 2144 FYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVG 2323
            FYLMGTADPTGVLNNDEVC+IL  G ISGKVLVYRNPGMHFGDVH+M+AVYVKE+EE VG
Sbjct: 659  FYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVYVKELEEFVG 718

Query: 2324 NAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKR 2503
            NAKYG+FFSTKG  SAAYEMATGDFDGDMYW+SRN ELLKYFKA++PW RV S PDSKK+
Sbjct: 719  NAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPELLKYFKASKPWKRVLSAPDSKKK 778

Query: 2504 NPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKI 2683
            NP+EFSD                PSF+MATAA+SWLTFMDRLLTLGDDR  EK  L  K+
Sbjct: 779  NPKEFSDXELENELFQLCLEARTPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSLMKKM 838

Query: 2684 IQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYK 2863
            I+L+DIYYDALDAPKSGKKVKVP+EL+AEMYPH+ME+  +LSYHSSS+LGQIYDRV A K
Sbjct: 839  IRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQIYDRVDALK 898

Query: 2864 NEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKY 3043
            N+ V ++E+WKL CFD+PIPE YV MWK+RYESYR+EM +AL+SG+ES+NDAA+EVIKKY
Sbjct: 899  NDFVPRKEIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESRNDAADEVIKKY 958

Query: 3044 KQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHGVEKCSFAWRVAGSALCNLCAW 3223
            KQLLYEA DMEES+K+++VIY+EA+AIYHV Y+YAM HGVEKC+FAWR+A SALCNLCAW
Sbjct: 959  KQLLYEAGDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAASALCNLCAW 1018

Query: 3224 RIAGPKEKPLTILPSVLRD 3280
            ++AGP+EKPL ILPS+LR+
Sbjct: 1019 KLAGPREKPLPILPSLLRE 1037


>ref|XP_011078257.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1036

 Score = 1420 bits (3676), Expect = 0.0
 Identities = 739/1047 (70%), Positives = 845/1047 (80%), Gaps = 8/1047 (0%)
 Frame = +2

Query: 164  MDAST-HQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKK 340
            MDAS+  Q VRLPE +E II+RIC EKNQPPLK YAR MLAEIGEQA++E+LT +LSSK 
Sbjct: 1    MDASSPDQEVRLPEPVEMIIQRICLEKNQPPLKKYARNMLAEIGEQAALEVLTTVLSSK- 59

Query: 341  TITSFSGYVSYLIKRDYTIEAAKVLSAYGSP-QVSTQTQRMLSPSSISPYISTQKLNGEX 517
            TI SF GYV++L+K+D+  +AA VLSAYGSP Q ST   +    S  +PY        E 
Sbjct: 60   TIRSFGGYVAFLVKKDFPNQAAAVLSAYGSPHQCSTSPNK----SPHTPYY-------ER 108

Query: 518  XXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAEST 697
                              KT  Q+I C LSF++ET EK     + QS L  E RE+ +S 
Sbjct: 109  LRSPVSSFSVDSIPSNLNKTGPQNIRCNLSFENETLEKSCPGARCQSPLPDELREMTDSV 168

Query: 698  TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 877
            T+SQQLM+L++L++RKLFLVLSYIGRQKLEAVV LDGANEI+SMKDLPM  FE+KIW +Y
Sbjct: 169  TISQQLMILSQLQFRKLFLVLSYIGRQKLEAVVNLDGANEIYSMKDLPMNDFEAKIWNSY 228

Query: 878  GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTV 1057
            G+KFC++SDRSQYL WDS KTH Y CHVC DGSYYFKGPYLNS R HLQRSLGDD IL V
Sbjct: 229  GKKFCEESDRSQYLDWDSQKTHHYYCHVCRDGSYYFKGPYLNSFRTHLQRSLGDDSILIV 288

Query: 1058 KFLEDGAYVT-DKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVR 1234
            KFLED +      +VEEGILVG  RYRFFVFKDERK+VKK +M  EKK++YSAVK Y+VR
Sbjct: 289  KFLEDDSNTMGSSVVEEGILVGLRRYRFFVFKDERKKVKKIQMV-EKKSTYSAVKGYYVR 347

Query: 1235 IDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADA 1414
            +DSV P+G +  YILS K ISEAR  FMHI+ VSTIEKYMARFSLILSKT KL++D    
Sbjct: 348  VDSVCPHGYEEGYILSRKTISEARRLFMHIHTVSTIEKYMARFSLILSKTRKLDIDFKAV 407

Query: 1415 TVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE- 1591
            T++ IEDIPF+DEN SIIHDEDGKPILHTDGTGYIS DLAM+CP+ FS A  I DNSFE 
Sbjct: 408  TIQRIEDIPFRDENDSIIHDEDGKPILHTDGTGYISVDLAMKCPRSFSLANDITDNSFEK 467

Query: 1592 ---IVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSM 1762
               IVN  D ACQKRGAEARNKEPPLL+QCRLF+ G AVKGTLL+NRKLEPGTIQIRPSM
Sbjct: 468  YEEIVNIEDTACQKRGAEARNKEPPLLIQCRLFYDGCAVKGTLLINRKLEPGTIQIRPSM 527

Query: 1763 IKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEE 1942
            IKVERD+K+P  ETF SLEIVA S RP RN LSKYLIALLSYGGVPQEFF NLL NALEE
Sbjct: 528  IKVERDQKLPLGETFKSLEIVATSRRPGRNALSKYLIALLSYGGVPQEFFCNLLTNALEE 587

Query: 1943 TRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEG 2122
            TRNVYS+ RAALRVASN+DGL+   VA RMIS+G+PL+EPYLQ CLS+LE GEK KLK+G
Sbjct: 588  TRNVYSDTRAALRVASNYDGLEVGVVARRMISSGIPLSEPYLQHCLSSLESGEKIKLKQG 647

Query: 2123 KIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVK 2302
            KIP+SESFYLMGTADPTGVL N EVC+ILD G ISGKVLVYRNPGMHFGDVH+M+AVY +
Sbjct: 648  KIPVSESFYLMGTADPTGVLKNHEVCVILDNGQISGKVLVYRNPGMHFGDVHVMEAVYKE 707

Query: 2303 EIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYS 2482
            E+EEVVGNAKYGIFFSTKG RSAAYEMATGDFDGDMYW+SRN ELLKYFKA+EPW R YS
Sbjct: 708  ELEEVVGNAKYGIFFSTKGKRSAAYEMATGDFDGDMYWVSRNPELLKYFKASEPWKRFYS 767

Query: 2483 IP-DSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATE 2659
             P DSK RNP+EFSD+               PSF MATAA+SWLTFMDRLLTLGDD A+E
Sbjct: 768  TPADSKIRNPREFSDMELEHELFQLFQEAREPSFSMATAADSWLTFMDRLLTLGDDCASE 827

Query: 2660 KNYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQI 2839
            K  LK KIIQLIDIYYDALDAPKSGKKVKVP EL+AEMYPH+MER  + SY+SSSILG+I
Sbjct: 828  KLSLKKKIIQLIDIYYDALDAPKSGKKVKVPNELRAEMYPHHMERGAEFSYNSSSILGRI 887

Query: 2840 YDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDA 3019
            YD+V A+KN+AV  +E+WKL   D PIPE Y+  WKARY+ YR+EM  A++S DESK+ A
Sbjct: 888  YDKVQAFKNDAVPGKEIWKLPFLDDPIPELYLK-WKARYKDYREEMTSAMKSSDESKDLA 946

Query: 3020 ANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHGVEKCSFAWRVAGS 3199
            A +VI KYKQLLYEAP MEES+KNT+ IYEE+VAIYHV+Y+YAM HGV +CSFAW+VAGS
Sbjct: 947  ARDVIHKYKQLLYEAPCMEESAKNTEEIYEESVAIYHVVYDYAMRHGVTRCSFAWKVAGS 1006

Query: 3200 ALCNLCAWRIAGPKEKPLTILPSVLRD 3280
            ALC+LCAW++AGPKE+P+ ILPSVLR+
Sbjct: 1007 ALCDLCAWKLAGPKEEPIAILPSVLRE 1033


>ref|XP_011093632.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Sesamum indicum]
          Length = 1013

 Score = 1273 bits (3294), Expect = 0.0
 Identities = 652/1049 (62%), Positives = 802/1049 (76%), Gaps = 10/1049 (0%)
 Frame = +2

Query: 164  MDASTHQAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKT 343
            MD S HQ   LP SIE+ I++IC++++QPP+  YARK+LA+IGE+A+ +LL  I S+++ 
Sbjct: 1    MDGSPHQEAPLPHSIEKTIQKICKDQSQPPISSYARKLLADIGEKAASDLLARI-SNQRI 59

Query: 344  ITSFSGYVSYLIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXX 523
              SFSGY+  L+K+ +                S+ ++R LSPSS SP  ++ K       
Sbjct: 60   TKSFSGYIITLVKKYHPAVVP-----------SSPSKRSLSPSSSSPRNTSLK------- 101

Query: 524  XXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLA-----GEHREVA 688
                            K+ LQ I   LSF+D+ QE R    + Q+S A      E R + 
Sbjct: 102  ----------------KSPLQ-IGRLLSFEDDVQETRGPIFEHQTSTAVELKNSELRGMT 144

Query: 689  ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 868
            +S T+SQQL +L+KLEYRKLFLVLSY GR KLE V+T+DGAN+I   KDLPM +FE+ IW
Sbjct: 145  KSNTISQQLRILSKLEYRKLFLVLSYTGRHKLENVMTVDGANDIFQKKDLPMSIFETAIW 204

Query: 869  ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKI 1048
             TYG K+C+KSDRS+YL WD GKTH+Y C+V EDGSY+FKGP L+STR HLQRSLGDD I
Sbjct: 205  NTYGNKYCNKSDRSEYLDWDFGKTHLYYCYVHEDGSYHFKGPCLSSTRTHLQRSLGDDNI 264

Query: 1049 LTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYF 1228
            L VKFLED  Y  + IVEEGILVG  R+RF VFKDERK  KKN++ENEK  S  AVKC F
Sbjct: 265  LIVKFLEDDMYGVN-IVEEGILVGLRRFRFLVFKDERKGRKKNQIENEKAYS-CAVKCLF 322

Query: 1229 VRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLA 1408
            VRIDSV P  +D NYILSGK + E R  FMH++ V T+EKYMARFSLILSKTIKL+VD  
Sbjct: 323  VRIDSVDPV-EDNNYILSGKSVGEVRRLFMHVHTVLTMEKYMARFSLILSKTIKLQVDFG 381

Query: 1409 DATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSF 1588
              TVETI+DIPF+D++GS+I DEDGKP+LHTDGTGYISEDLAM+CPK+FS AKYI DNSF
Sbjct: 382  AITVETIQDIPFRDDSGSLICDEDGKPLLHTDGTGYISEDLAMKCPKEFSAAKYITDNSF 441

Query: 1589 E----IVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRP 1756
            E     V+  DA+CQ R A++RNKE PLLMQCRLF+ G AVKGTLLVN+KL+ G IQIRP
Sbjct: 442  ETYHEFVDIDDASCQTRLAKSRNKEAPLLMQCRLFYNGCAVKGTLLVNKKLKLGEIQIRP 501

Query: 1757 SMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNAL 1936
            SMIKVERD   P +  FNSLEIVAIS++P R +LSK LI+LL+YGGVPQ+ FL LL NAL
Sbjct: 502  SMIKVERDCTAPVQGNFNSLEIVAISHKPGRTFLSKTLISLLNYGGVPQQVFLELLTNAL 561

Query: 1937 EETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLK 2116
            E+T+ VYSNR AALRVASNHDGLDF ++A+ MIS G+PLNEPYL  CL NL++ E+ KL+
Sbjct: 562  EDTQKVYSNRHAALRVASNHDGLDFGYLAQLMISCGIPLNEPYLNHCLCNLKKDERAKLR 621

Query: 2117 EGKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVY 2296
            +GK+P+ ESFYLMGTADPTGVL  D+VC++LD G ISGKVLVYRNPG+HFGD+H+M+A+Y
Sbjct: 622  KGKVPVGESFYLMGTADPTGVLEYDQVCVVLDNGQISGKVLVYRNPGLHFGDIHVMEAIY 681

Query: 2297 VKEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRV 2476
            V+++E+ +G++KYGIFFSTKG RSA YEMATGDFDGDMYW+SR+ ELLK FKA+EPW RV
Sbjct: 682  VQQLEDYIGDSKYGIFFSTKGGRSAPYEMATGDFDGDMYWVSRHHELLKNFKASEPWARV 741

Query: 2477 YSIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRAT 2656
            YS  +S  +NP+E S                 PSF+M+TAA+SWL FMDRLLTLGDDR  
Sbjct: 742  YSTKESNSKNPKELSSEELERELFRLFLQARKPSFEMSTAADSWLAFMDRLLTLGDDRTF 801

Query: 2657 EKNYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQ 2836
            EK+ L+ K+I LIDIYYDALDAPKSGK+V +P+EL+ EMYPH+MER P+ SYHS SILG+
Sbjct: 802  EKDCLREKMIHLIDIYYDALDAPKSGKRVNLPKELRPEMYPHHMERGPEYSYHSMSILGR 861

Query: 2837 IYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKND 3016
            IYD +  +K+E V ++E+WKL CFDIPIPE Y+  W+  YE+YR+EM +AL S  ESK D
Sbjct: 862  IYDMIEEFKDEVVPKKEIWKLPCFDIPIPETYIQKWRINYENYRREMAKALNSNYESKKD 921

Query: 3017 AANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYA-MIHGVEKCSFAWRVA 3193
            AAN+VIKK K+ LY+APDMEESSK+T VIY+EA+AIYHV Y+YA  +  + KCSFAW+V 
Sbjct: 922  AANDVIKKNKEFLYDAPDMEESSKDTTVIYKEALAIYHVTYDYAKSMDDIGKCSFAWKVG 981

Query: 3194 GSALCNLCAWRIAGPKEKPLTILPSVLRD 3280
            GSALCNL AW+ AGPKEKPLTILPSV+R+
Sbjct: 982  GSALCNLYAWKTAGPKEKPLTILPSVIRE 1010


>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Erythranthe guttata]
          Length = 878

 Score = 1211 bits (3132), Expect = 0.0
 Identities = 601/861 (69%), Positives = 700/861 (81%)
 Frame = +2

Query: 698  TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 877
            T++QQL+ LNKLEYRKLFLVLSYIGR+KLE VVT++ A+EI+ M + PM+ FE+KIW  Y
Sbjct: 63   TITQQLITLNKLEYRKLFLVLSYIGREKLEDVVTVEDADEIYRMNEFPMQAFENKIWKKY 122

Query: 878  GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTV 1057
            GQ+F D+SDRSQYL WDSGKTH+Y CHV +DG YYFKGPYLNS + HLQRSLGDD IL V
Sbjct: 123  GQRFYDESDRSQYLDWDSGKTHVYYCHVYQDGRYYFKGPYLNSMKTHLQRSLGDDNILIV 182

Query: 1058 KFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRI 1237
            KFLEDGA+ T  I +EGILVG  RYRFFVFKD+RK+V KN+ + EKKA+YS V+C+FVR+
Sbjct: 183  KFLEDGAFGTGNIAQEGILVGLRRYRFFVFKDDRKKVNKNQSDKEKKATYSNVRCFFVRV 242

Query: 1238 DSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADAT 1417
            DSV P G D NYILS K I EAR  FMHI+ +S+IEK MAR SLILSK+IKLE++LA   
Sbjct: 243  DSVSPSGYDENYILSRKTIGEARRMFMHIHTISSIEKCMARLSLILSKSIKLEINLAAVI 302

Query: 1418 VETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFEIV 1597
            +E I+DIPFQDE G +IHDEDGKPILHTDGTGYISEDLA++C   FS  KY  D+ FE  
Sbjct: 303  IEKIKDIPFQDEGGFVIHDEDGKPILHTDGTGYISEDLAIRCQICFSAPKYGTDDRFE-- 360

Query: 1598 NSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVER 1777
                               PLL+QCR+FH GYAVKGTLLVNRKLEPGTIQIRPSMIKVER
Sbjct: 361  -------------------PLLVQCRIFHEGYAVKGTLLVNRKLEPGTIQIRPSMIKVER 401

Query: 1778 DEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVY 1957
            D  +  EE FNSLEIV IS++P RN LSKYLIALLSYGGVPQEFFLNL+ N LE+ RNVY
Sbjct: 402  DHNIKVEEAFNSLEIVNISHKPGRNCLSKYLIALLSYGGVPQEFFLNLVANTLEDARNVY 461

Query: 1958 SNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPIS 2137
            +NRRAALRVASNH GLD+ F+A+RMI +GVPL+EPYLQLCLSNLE GEKTKLK GKIP++
Sbjct: 462  TNRRAALRVASNHAGLDYGFLAQRMICSGVPLDEPYLQLCLSNLENGEKTKLKTGKIPLN 521

Query: 2138 ESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEV 2317
            ESFYLMGTADPTGVLNNDEVC+IL  G ISGKVLVYRNPGMHFGDVH+M+AVYVKE+EE 
Sbjct: 522  ESFYLMGTADPTGVLNNDEVCVILGNGQISGKVLVYRNPGMHFGDVHVMEAVYVKELEEF 581

Query: 2318 VGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSK 2497
            VGNAKYG+FFSTKG  SAAYEMATGDFDGDMYW+SRN EL          N ++ +    
Sbjct: 582  VGNAKYGVFFSTKGATSAAYEMATGDFDGDMYWVSRNPEL---------ENELFQL---- 628

Query: 2498 KRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKG 2677
                                     PSF+MATAA+SWLTFMDRLLTLGDDR  EK  L  
Sbjct: 629  -------------------CLEARTPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSLMK 669

Query: 2678 KIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIA 2857
            K+I+L+DIYYDALDAPKSGKKVKVP+EL+AEMYPH+ME+  +LSYHSSS+LGQIYDRV A
Sbjct: 670  KMIRLVDIYYDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQIYDRVDA 729

Query: 2858 YKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIK 3037
             KN+ V ++E+WKL CFD+PIPE YV MWK+RYESYR+EM +AL+SG+ES+NDAA+EVIK
Sbjct: 730  LKNDFVPRKEIWKLPCFDVPIPEIYVKMWKSRYESYRREMTKALKSGNESRNDAADEVIK 789

Query: 3038 KYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHGVEKCSFAWRVAGSALCNLC 3217
            KYKQLLYEA DMEES+K+++VIY+EA+AIYHV Y+YAM HGVEKC+FAWR+A SALCNLC
Sbjct: 790  KYKQLLYEAGDMEESAKSSEVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAASALCNLC 849

Query: 3218 AWRIAGPKEKPLTILPSVLRD 3280
            AW++AGP+EKPL ILPS+LR+
Sbjct: 850  AWKLAGPREKPLPILPSLLRE 870


>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
          Length = 898

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 550/911 (60%), Positives = 666/911 (73%), Gaps = 4/911 (0%)
 Frame = +2

Query: 164  MDASTHQAVRLPESIERIIKRICQEKNQPPLKYYA--RKMLAEIGEQASMELLTMILSSK 337
            MD S+H+ VRLPES+E  I+RI  EK QPPL   +  RKML EIGEQ S++LL +I SSK
Sbjct: 8    MDGSSHEDVRLPESVEAAIERIAVEKQQPPLPRNSDVRKMLREIGEQPSLKLLNIIHSSK 67

Query: 338  KTITSFSGYVSYLIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEX 517
              I SF G+VS L++  Y  +AA + S Y SP  +     + SPSSISP ++    NGE 
Sbjct: 68   TPIKSFGGFVSKLVRTYYPNQAAAIPSPYKSPPPT-----IYSPSSISPNVAR---NGES 119

Query: 518  XXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAEST 697
                               T  Q+I C+LSF+DE  E R+                 ES 
Sbjct: 120  LQSSLSNLQG---------TGFQNISCQLSFEDEALESRN-----------------ESM 153

Query: 698  TVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITY 877
             +S QL+ LNKLE+RKLFL+LSY   QKLE V+T + AN++++ K LPM  FE  IW  +
Sbjct: 154  AISPQLLTLNKLEFRKLFLLLSYANGQKLEDVLTTEEANQVYANKALPMPEFERLIWDKF 213

Query: 878  GQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTV 1057
            G ++C+  DRSQ+L WDSGKTHIY CHV  DGSY FKGPYLNS+R HLQRSLGDD +LTV
Sbjct: 214  GYRYCNGLDRSQHLDWDSGKTHIYNCHVNPDGSYSFKGPYLNSSRTHLQRSLGDDNVLTV 273

Query: 1058 KFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRI 1237
            KFL    Y   KIVEEG++VG  RYRFFVFKDE+K+ KKN+ E + K+S+SAVKCYFV +
Sbjct: 274  KFLAKEIYPARKIVEEGLIVGLRRYRFFVFKDEQKKAKKNQAE-DNKSSHSAVKCYFVHL 332

Query: 1238 DSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADAT 1417
            DS+     + +Y+L  K +SEAR  FMHI+ +STIEKYMAR SLILSKT ++++D A   
Sbjct: 333  DSISSNDHEEDYVLFRKSVSEARRLFMHIHTLSTIEKYMARLSLILSKTTRIDLDFAAII 392

Query: 1418 VETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFEIV 1597
            VE IEDIPFQD+NGSII DEDGKPILHTDGTGYIS+DLAM+C KDF  + +  +++FE  
Sbjct: 393  VEIIEDIPFQDDNGSIIRDEDGKPILHTDGTGYISQDLAMKCSKDFYASMHNTNSTFE-- 450

Query: 1598 NSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVER 1777
                               PLL+QCRLFH GYAVKGTLLVNRKLEPG IQIRPSMIKVE+
Sbjct: 451  -------------------PLLIQCRLFHDGYAVKGTLLVNRKLEPGRIQIRPSMIKVEK 491

Query: 1778 DEKVPKEET--FNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRN 1951
            D  +  EE   FNSLEI  IS RP RN+LSKYLI+LLSYGGVPQEFFLNLL  ALEET+N
Sbjct: 492  DHSMESEEILKFNSLEINTISRRPNRNFLSKYLISLLSYGGVPQEFFLNLLFKALEETQN 551

Query: 1952 VYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIP 2131
            VYSNRR ALRVAS+HD  D   +A+RMI  G+PL+EPYLQ CLS LE  +K KLKEG+IP
Sbjct: 552  VYSNRRVALRVASHHDDWDLGLMAQRMICCGIPLDEPYLQHCLSKLESSQKKKLKEGRIP 611

Query: 2132 ISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIE 2311
            + ES YLMGTADPTGVL+NDEVC+ILD G ISGKVLVYRNPGMHFGD+H+M+AVYVK +E
Sbjct: 612  VDESCYLMGTADPTGVLHNDEVCVILDSGQISGKVLVYRNPGMHFGDIHVMEAVYVKGLE 671

Query: 2312 EVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPD 2491
            E +GNAKYGIFFSTKG RSAAYE+ATGDFDGD YW+SRN ELL +FKA+EPW RVY  PD
Sbjct: 672  EFIGNAKYGIFFSTKGQRSAAYEIATGDFDGDTYWVSRNPELLTFFKASEPWKRVYPAPD 731

Query: 2492 SKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYL 2671
            ++KR+P++FS                 PS++M TAA+SWLT+MDRLLTLGDDRA EKN L
Sbjct: 732  AEKRDPRKFSSSELERELFQLFLDSRTPSYNMGTAADSWLTYMDRLLTLGDDRAAEKNSL 791

Query: 2672 KGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRV 2851
            K K+I+L+DIYYDALDAPKSGKK+ VP +LKAE++PH+ME+  + SYHSSSILGQIYD V
Sbjct: 792  KTKMIKLVDIYYDALDAPKSGKKINVPDDLKAELFPHHMEKAIEKSYHSSSILGQIYDNV 851

Query: 2852 IAYKNEAVLQR 2884
            + + ++AV ++
Sbjct: 852  LEFNSDAVSRK 862


>ref|XP_009780069.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana sylvestris]
          Length = 1023

 Score = 1014 bits (2622), Expect = 0.0
 Identities = 538/1034 (52%), Positives = 707/1034 (68%), Gaps = 5/1034 (0%)
 Frame = +2

Query: 194  LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYVSY 373
            LP SIE ++++IC E+ Q P     R+ L  IGEQ S+ +L  I+S++    + S ++ Y
Sbjct: 23   LPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILR-IISTRAIRKTLSAFLVY 81

Query: 374  LIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXXXX 553
            L+ R     ++   S + SPQ  T    + +P S       +++ GE             
Sbjct: 82   LMDRYPDCLSS---SPFASPQKRTSPSLLPTPES-------KRVQGESSSKPKPKIGSSP 131

Query: 554  XXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQLMVLNKL 733
                      Q +  +LSF DE   + +                  S  +SQQLM+L +L
Sbjct: 132  CVQFASP---QRVIRQLSFGDEPSPESNCRTP--------------SLNISQQLMILGEL 174

Query: 734  EYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQ 913
            E+RKLFLVLSYIG +KLE V++   A++I   K LPM  FES+IW  +G+    +SDRS+
Sbjct: 175  EFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYTESDRSK 234

Query: 914  YLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDK 1093
            YL WD GKTH+Y CH+ ++G   FKGPYLN+TR HLQR+LGD+ +L VKF+ED A   + 
Sbjct: 235  YLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKFVED-ACCANI 293

Query: 1094 IVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNY 1273
            IVEEGILVG  RYRFFV+KD+++R K   +   K AS   +KCYFVR +S+  Y   G+Y
Sbjct: 294  IVEEGILVGFRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSY 350

Query: 1274 ILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQDE 1453
            + +G+R SEARC FMH++ VS + KY AR SLILSKTIKL+V+LA  T+E +EDI  +DE
Sbjct: 351  VFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDE 410

Query: 1454 NGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNSGDAACQ 1621
            +G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+YI+D ++E    IV+  D   +
Sbjct: 411  SGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAE 470

Query: 1622 KRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEE 1801
            +RG  + NKEPPLLMQCRL+  G AVKGT L+NRK+    IQIRPSM+KVE D  +    
Sbjct: 471  RRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLP 530

Query: 1802 TFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALR 1981
            TFNSLE+VAISNRPR+ YLSK+LI+LLSYGGV +EFF+ +L +ALEET+ VY  +RAAL+
Sbjct: 531  TFNSLEVVAISNRPRKTYLSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALK 590

Query: 1982 VASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGT 2161
            VA N+  +D   +A RMIS+GVPLNEP+L   LS L + E++KL+ GK+P+S+SFYLMGT
Sbjct: 591  VAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGT 650

Query: 2162 ADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKYGI 2341
            ADPTGVL N+EVC+ILD G +SG+VLVYRNPG+HFGDVH+MKA YV+E+ ++VG+AKYGI
Sbjct: 651  ADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGI 710

Query: 2342 FFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKRNPQEFS 2521
             FSTKG RSAA E+A GDFDGDMYW+S N +L+  ++A++PW R +S P +  + P EFS
Sbjct: 711  VFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFS 770

Query: 2522 DVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKIIQLIDI 2701
                                 M+ AA+SWL FMDRLL L DD A   + LKGK++ LIDI
Sbjct: 771  ADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDI 830

Query: 2702 YYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAVLQ 2881
            YYDALDAPKSGKKV +P +LKA  +PHYMER    SYHS+SILGQIYD V +Y +E +  
Sbjct: 831  YYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCI 890

Query: 2882 REVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKYKQLLYE 3061
             E+ KL CFD+ IP+    +W+ RYE Y+K+M  A+ SG E KN A NEVIKKYK+LLY 
Sbjct: 891  TEISKLPCFDVEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYG 950

Query: 3062 APDMEESSKNTQVIYEEAVAIYHVIYEYAMI-HGVEKCSFAWRVAGSALCNLCAWRIAGP 3238
            AP+ E+S + T+ I+ EA+A+YHV Y+ A I + +EKC FAW+VAGSALC + A      
Sbjct: 951  APEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMY---Q 1007

Query: 3239 KEKPLTILPSVLRD 3280
            KE    ILPS+L+D
Sbjct: 1008 KENAFPILPSILQD 1021


>ref|XP_009780070.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana sylvestris]
          Length = 1021

 Score = 1005 bits (2599), Expect = 0.0
 Identities = 536/1034 (51%), Positives = 705/1034 (68%), Gaps = 5/1034 (0%)
 Frame = +2

Query: 194  LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYVSY 373
            LP SIE ++++IC E+ Q P     R+ L  IGEQ S+ +L  I+S++    + S ++ Y
Sbjct: 23   LPSSIEAMLRKICSEQCQEPPDAGIRRRLGSIGEQGSLAILR-IISTRAIRKTLSAFLVY 81

Query: 374  LIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXXXX 553
            L+ R     ++   S + SPQ  T    + +P S       +++ GE             
Sbjct: 82   LMDRYPDCLSS---SPFASPQKRTSPSLLPTPES-------KRVQGESSSKPKPKIGSSP 131

Query: 554  XXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQLMVLNKL 733
                      Q +  +LSF DE   + +                  S  +SQQLM+L +L
Sbjct: 132  CVQFASP---QRVIRQLSFGDEPSPESNCRTP--------------SLNISQQLMILGEL 174

Query: 734  EYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQ 913
            E+RKLFLVLSYIG +KLE V++   A++I   K LPM  FES+IW  +G+    +SDRS+
Sbjct: 175  EFRKLFLVLSYIGSKKLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYTESDRSK 234

Query: 914  YLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDK 1093
            YL WD GKTH+Y CH+ ++G   FKGPYLN+TR HLQR+LGD+ +L VKF+ED A   + 
Sbjct: 235  YLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKFVED-ACCANI 293

Query: 1094 IVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNY 1273
            IVEEGILVG  RYRFFV+KD+++R K   +   K AS   +KCYFVR +S+  Y   G+Y
Sbjct: 294  IVEEGILVGFRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSY 350

Query: 1274 ILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQDE 1453
            + +G+R SEARC FMH++ VS + KY AR SLILSKTIKL+V+LA  T+E +EDI  +DE
Sbjct: 351  VFAGRRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDE 410

Query: 1454 NGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNSGDAACQ 1621
            +G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+YI+D ++E    IV+  D   +
Sbjct: 411  SGCIICDEDGEPCIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAE 470

Query: 1622 KRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEE 1801
            +RG  + NKEPPLLMQCRL+  G AVKGT L+NRK+    IQIRPSM+KVE D  +    
Sbjct: 471  RRGNGSLNKEPPLLMQCRLYKNGCAVKGTFLINRKIGSRKIQIRPSMVKVETDPTISSLP 530

Query: 1802 TFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALR 1981
            TFNSLE+VAI  RPR+ YLSK+LI+LLSYGGV +EFF+ +L +ALEET+ VY  +RAAL+
Sbjct: 531  TFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGREFFMEILGSALEETKQVYLKKRAALK 588

Query: 1982 VASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGT 2161
            VA N+  +D   +A RMIS+GVPLNEP+L   LS L + E++KL+ GK+P+S+SFYLMGT
Sbjct: 589  VAINYREMDDDCLAARMISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGT 648

Query: 2162 ADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKYGI 2341
            ADPTGVL N+EVC+ILD G +SG+VLVYRNPG+HFGDVH+MKA YV+E+ ++VG+AKYGI
Sbjct: 649  ADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGI 708

Query: 2342 FFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKRNPQEFS 2521
             FSTKG RSAA E+A GDFDGDMYW+S N +L+  ++A++PW R +S P +  + P EFS
Sbjct: 709  VFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRTHSTPKAVSKKPTEFS 768

Query: 2522 DVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKIIQLIDI 2701
                                 M+ AA+SWL FMDRLL L DD A   + LKGK++ LIDI
Sbjct: 769  ADELEYELFRQFLRAKSKGASMSVAADSWLAFMDRLLMLRDDDADGMHSLKGKMLHLIDI 828

Query: 2702 YYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAVLQ 2881
            YYDALDAPKSGKKV +P +LKA  +PHYMER    SYHS+SILGQIYD V +Y +E +  
Sbjct: 829  YYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCI 888

Query: 2882 REVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKYKQLLYE 3061
             E+ KL CFD+ IP+    +W+ RYE Y+K+M  A+ SG E KN A NEVIKKYK+LLY 
Sbjct: 889  TEISKLPCFDVEIPDECTTLWRERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYG 948

Query: 3062 APDMEESSKNTQVIYEEAVAIYHVIYEYAMI-HGVEKCSFAWRVAGSALCNLCAWRIAGP 3238
            AP+ E+S + T+ I+ EA+A+YHV Y+ A I + +EKC FAW+VAGSALC + A      
Sbjct: 949  APEFEQSVRKTEDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMY---Q 1005

Query: 3239 KEKPLTILPSVLRD 3280
            KE    ILPS+L+D
Sbjct: 1006 KENAFPILPSILQD 1019


>ref|XP_009592436.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1020

 Score = 1004 bits (2596), Expect = 0.0
 Identities = 538/1034 (52%), Positives = 707/1034 (68%), Gaps = 5/1034 (0%)
 Frame = +2

Query: 194  LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYVSY 373
            LP S+E ++++IC E+ Q P     R+ L  IGEQ S+ +L  I+SS+    + S ++ Y
Sbjct: 20   LPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILR-IISSRPIRKTLSAFLVY 78

Query: 374  LIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXXXX 553
            L+ R     ++   S + SPQ  T    + +P S       +++ GE             
Sbjct: 79   LMDRYPDCLSS---SPFASPQKRTSPSLLPTPES-------KRVQGESSTKP-------- 120

Query: 554  XXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQLMVLNKL 733
                  K  + S  C + F    +  R  S + + S     R       +SQQLM+L++L
Sbjct: 121  ------KPKIGSSPC-VQFASPHRVVRQLSFRDEPSPESNCR--TPPPNISQQLMILSEL 171

Query: 734  EYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQ 913
            E+RKLFLVLSYIG + LE V++   A++I   K LPM  FES+IW  +G+    +SDRS+
Sbjct: 172  EFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYAESDRSK 231

Query: 914  YLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDK 1093
            YL WD GKTH+Y CH+ ++G   FKGPYLN+TR HLQR+LGD+ +L VKF+ED A   + 
Sbjct: 232  YLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKFVED-ACCANI 290

Query: 1094 IVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNY 1273
            IVEEGILVG  RYRFFV+KD+++R K   +   K AS   +KCYFVR +S+  Y   G+Y
Sbjct: 291  IVEEGILVGFRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSY 347

Query: 1274 ILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQDE 1453
            + + KR SEARC FMH++ VS + KY AR SLILSKTIKL+V+LA  T+E +EDI  +DE
Sbjct: 348  VFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDE 407

Query: 1454 NGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNSGDAACQ 1621
            +G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+YI+D ++E    IV+  D   +
Sbjct: 408  SGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAE 467

Query: 1622 KRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEE 1801
            +RG  + NKEPPLLMQCRLF  G AVKGT LVNRK+    IQIRPSM+KVE D  +    
Sbjct: 468  RRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALP 527

Query: 1802 TFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALR 1981
            TFNSLE+VAIS+RPR+ YLSK+LI+LLSYGGV  EFF+ +L +ALEET+ VY  +RAAL+
Sbjct: 528  TFNSLEVVAISHRPRKTYLSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALK 587

Query: 1982 VASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGT 2161
            VA N+  +D   +A R+IS+GVPLNEP+L   LS L + E++KL+ GK+P+S+SFYLMGT
Sbjct: 588  VAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGT 647

Query: 2162 ADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKYGI 2341
            ADPTGVL N+EVC+ILD G +SG+VLVYRNPG+HFGDVH+MKA YV+E+ ++VG+AKYGI
Sbjct: 648  ADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGI 707

Query: 2342 FFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKRNPQEFS 2521
            FFSTKG RSAA E+A GDFDGDMYW+S N +L+  ++A++PW R++S P +  + P EFS
Sbjct: 708  FFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFS 767

Query: 2522 DVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKIIQLIDI 2701
                                 M+ AA+SWL FMD LL L DD     + LKGKI+ LIDI
Sbjct: 768  ADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLLMLRDDDVDGMHSLKGKILHLIDI 827

Query: 2702 YYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAVLQ 2881
            YYDALDAPKSGKKV +P +LKA  +PHYMER    SYHS+SILGQIYD V +Y +E +  
Sbjct: 828  YYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCI 887

Query: 2882 REVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKYKQLLYE 3061
             E+ KL CFD+ IP+  + +W  RYE Y+K+M  A+ SG E KN A NEVIKKYK+LLY 
Sbjct: 888  TEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYG 947

Query: 3062 APDMEESSKNTQVIYEEAVAIYHVIYEYAMI-HGVEKCSFAWRVAGSALCNLCAWRIAGP 3238
            AP+ E+S + T+ I+ EA+A+YHV Y+ A I + +EKC FAW+VAGSALC + A      
Sbjct: 948  APEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMY---H 1004

Query: 3239 KEKPLTILPSVLRD 3280
            KE    ILPS+L+D
Sbjct: 1005 KENAFPILPSILQD 1018


>emb|CDP03267.1| unnamed protein product [Coffea canephora]
          Length = 1019

 Score = 1001 bits (2587), Expect = 0.0
 Identities = 540/1046 (51%), Positives = 711/1046 (67%), Gaps = 14/1046 (1%)
 Frame = +2

Query: 185  AVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTI-TSFSG 361
            +V L E +ER+I++IC EK QPP  +YAR+ L +IGE+ + E++  I  S++ I T+ S 
Sbjct: 12   SVSLSEPVERMIEQICIEKQQPPPDHYARQRLFDIGEEKAYEIVRRIYYSEEAIRTTLSR 71

Query: 362  YVSYLIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXX 541
            Y+++                      S Q+    S S+ SP     +L+           
Sbjct: 72   YITWFTD-------------------SPQSPFRQSSSTPSPRTPPPQLHASSSPPKRALH 112

Query: 542  XXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQLMV 721
                      + D +S C  +S            +   S L          TT + QL V
Sbjct: 113  FPPPPPTCFSQCD-ESPCSPMS-----------KLNMSSPLPHPESARPSQTTHNYQLTV 160

Query: 722  LNKLEYRKLFLVLSYIGR---QKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFC 892
            L++LE+RK FL+ SYIGR    KLE V+T + AN+I  MK+LPM V+ES IW   G++ C
Sbjct: 161  LSQLEFRKFFLLYSYIGRLVLSKLEEVITTENANKILEMKNLPMGVYESCIWDMCGKQLC 220

Query: 893  DKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLED 1072
              SDR + + WDSGKTH Y CHV EDGSY FKGPYL + R HLQR+LGDD +L V+F++D
Sbjct: 221  APSDRIEVIDWDSGKTHFYYCHVYEDGSYCFKGPYLKTIRTHLQRALGDDNVLIVRFVDD 280

Query: 1073 GAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEK-KASYSAV-KCYFVRIDSV 1246
            G   +D+I+E+GI+VG  RYRFF FKDE K  KK K   EK K   SA  KCYFVR DS+
Sbjct: 281  GKCNSDRIIEDGIIVGLRRYRFFAFKDECKDAKKKKKGLEKNKTPLSAFPKCYFVRFDSI 340

Query: 1247 VPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVE- 1423
               G D  Y+LS   ++EAR  FM + ++S++ KY+ARFSLILSKTIKL VDL+   ++ 
Sbjct: 341  ATSGTDEPYLLSSLEVNEARRLFMDVNSISSMAKYIARFSLILSKTIKLPVDLSSVVIDD 400

Query: 1424 TIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE---- 1591
            TI+DI  +D N   I D++G+P++HTDGTG+ISEDLA++CP+DF  A+YI+D  F+    
Sbjct: 401  TIQDIECRDGNNRPIKDDNGEPLIHTDGTGFISEDLALKCPQDFGRAQYIKDKDFQKFHN 460

Query: 1592 IVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKV 1771
             V   DA    RG EARN++PPLLMQCRLF  G AVKGTLLVN+KL+ GTIQIRPSMIKV
Sbjct: 461  FVGFVDAPFDVRGTEARNRDPPLLMQCRLFSQGLAVKGTLLVNKKLKAGTIQIRPSMIKV 520

Query: 1772 ERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRN 1951
            ++D + P  +TF+SLEIVA+S+RPRR +LSKYLIALLSYGGVP+ FF++L+ + LEET  
Sbjct: 521  QKDREGPIGQTFDSLEIVAVSHRPRRCHLSKYLIALLSYGGVPRTFFVDLMTSVLEETNA 580

Query: 1952 VYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIP 2131
            V++++RAA +VA + +G   A  A R++ AG+PLNEP+LQ  LS L   E+T LKEGKIP
Sbjct: 581  VFTDKRAAFKVALHQEGFYDAGGALRLLLAGIPLNEPHLQKRLSELANNERTLLKEGKIP 640

Query: 2132 ISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIE 2311
            ISESFYLMGTADPTG+L  +EVC++LD G +SGKVL+YRNPG+HFGDVH+++AVYV  +E
Sbjct: 641  ISESFYLMGTADPTGLLKENEVCVVLDNGQVSGKVLLYRNPGLHFGDVHVLEAVYVPALE 700

Query: 2312 EVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPD 2491
            +++GNAKYGIFFSTKG RS A E+A GDFDGDMYW+SRN +LLKYF A+ PW RVY    
Sbjct: 701  DIIGNAKYGIFFSTKGRRSVASEIANGDFDGDMYWVSRNPQLLKYFSASPPWTRVYPSLR 760

Query: 2492 SKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYL 2671
            ++++NP E+S                 PS++MA AA+SWL FMDRLL LGDD A EK+ L
Sbjct: 761  AERKNPNEYS--AEQLEHELFRHFLKKPSYNMAVAADSWLAFMDRLLILGDDNAKEKDAL 818

Query: 2672 KGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRV 2851
            K  +++LIDIYYDALDAPK G KV VP+ELKAE +PHYM +  D SY S+S+LG IYDR 
Sbjct: 819  KENMLKLIDIYYDALDAPKRGTKVIVPEELKAERFPHYMGK--DGSYRSTSVLGDIYDRA 876

Query: 2852 IAYKNEAVLQR--EVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAAN 3025
             A+++E   QR   + KL CFD+ +P+ Y++ W+ RY  YRKEM  AL+  DES+NDAA+
Sbjct: 877  EAFQSE---QRCIAIEKLPCFDVEVPQNYLSSWRGRYNEYRKEMNVALQKDDESRNDAAD 933

Query: 3026 EVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAM-IHGVEKCSFAWRVAGSA 3202
            +VIKKYK+LLYEA + EES K+ Q I++EA+A+Y V Y+YA+      KC FAW+ AGSA
Sbjct: 934  DVIKKYKRLLYEAAEFEESKKDVQEIHKEALALYQVTYDYAISTKDAGKCGFAWKAAGSA 993

Query: 3203 LCNLCAWRIAGPKEKPLTILPSVLRD 3280
            L +  A    G  E+ + + PS LR+
Sbjct: 994  LLSYFA---TGRNERLVPVSPSALRE 1016


>ref|XP_009592437.1| PREDICTED: probable RNA-dependent RNA polymerase 3 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1018

 Score =  997 bits (2578), Expect = 0.0
 Identities = 537/1034 (51%), Positives = 705/1034 (68%), Gaps = 5/1034 (0%)
 Frame = +2

Query: 194  LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYVSY 373
            LP S+E ++++IC E+ Q P     R+ L  IGEQ S+ +L  I+SS+    + S ++ Y
Sbjct: 20   LPSSVEAMLRKICSEQCQEPPDVGIRRRLGSIGEQGSLTILR-IISSRPIRKTLSAFLVY 78

Query: 374  LIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXXXX 553
            L+ R     ++   S + SPQ  T    + +P S       +++ GE             
Sbjct: 79   LMDRYPDCLSS---SPFASPQKRTSPSLLPTPES-------KRVQGESSTKP-------- 120

Query: 554  XXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTTVSQQLMVLNKL 733
                  K  + S  C + F    +  R  S + + S     R       +SQQLM+L++L
Sbjct: 121  ------KPKIGSSPC-VQFASPHRVVRQLSFRDEPSPESNCR--TPPPNISQQLMILSEL 171

Query: 734  EYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQ 913
            E+RKLFLVLSYIG + LE V++   A++I   K LPM  FES+IW  +G+    +SDRS+
Sbjct: 172  EFRKLFLVLSYIGSKTLEDVISPKIADDIVRKKTLPMTDFESEIWNAFGKACYAESDRSK 231

Query: 914  YLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDK 1093
            YL WD GKTH+Y CH+ ++G   FKGPYLN+TR HLQR+LGD+ +L VKF+ED A   + 
Sbjct: 232  YLDWDCGKTHLYYCHIKQNGYCTFKGPYLNTTRTHLQRALGDENVLIVKFVED-ACCANI 290

Query: 1094 IVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNY 1273
            IVEEGILVG  RYRFFV+KD+++R K   +   K AS   +KCYFVR +S+  Y   G+Y
Sbjct: 291  IVEEGILVGFRRYRFFVYKDDKERKKTPAIMKTKTAS---LKCYFVRFESIETYNHGGSY 347

Query: 1274 ILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQDE 1453
            + + KR SEARC FMH++ VS + KY AR SLILSKTIKL+V+LA  T+E +EDI  +DE
Sbjct: 348  VFAAKRTSEARCHFMHVHMVSNMAKYAARLSLILSKTIKLQVNLASVTIERVEDILCRDE 407

Query: 1454 NGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNSGDAACQ 1621
            +G II DEDG+P +HTDGTG+ISEDLAM+CPKDFS A+YI+D ++E    IV+  D   +
Sbjct: 408  SGCIICDEDGEPRIHTDGTGFISEDLAMRCPKDFSKAEYIKDENYENFVDIVDLEDMIAE 467

Query: 1622 KRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEE 1801
            +RG  + NKEPPLLMQCRLF  G AVKGT LVNRK+    IQIRPSM+KVE D  +    
Sbjct: 468  RRGNGSLNKEPPLLMQCRLFKNGCAVKGTFLVNRKIGSRKIQIRPSMVKVETDPTISALP 527

Query: 1802 TFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALR 1981
            TFNSLE+VAI  RPR+ YLSK+LI+LLSYGGV  EFF+ +L +ALEET+ VY  +RAAL+
Sbjct: 528  TFNSLEVVAI--RPRKTYLSKHLISLLSYGGVGNEFFMEILGSALEETKQVYLKKRAALK 585

Query: 1982 VASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGT 2161
            VA N+  +D   +A R+IS+GVPLNEP+L   LS L + E++KL+ GK+P+S+SFYLMGT
Sbjct: 586  VAINYREMDDDCLAARLISSGVPLNEPHLHARLSRLAKIERSKLRGGKLPLSDSFYLMGT 645

Query: 2162 ADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKYGI 2341
            ADPTGVL N+EVC+ILD G +SG+VLVYRNPG+HFGDVH+MKA YV+E+ ++VG+AKYGI
Sbjct: 646  ADPTGVLENNEVCVILDSGQVSGRVLVYRNPGLHFGDVHVMKARYVEELVDIVGDAKYGI 705

Query: 2342 FFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKRNPQEFS 2521
            FFSTKG RSAA E+A GDFDGDMYW+S N +L+  ++A++PW R++S P +  + P EFS
Sbjct: 706  FFSTKGPRSAASEIANGDFDGDMYWVSINRKLVDSYRASKPWTRMHSTPKAVSKKPTEFS 765

Query: 2522 DVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKIIQLIDI 2701
                                 M+ AA+SWL FMD LL L DD     + LKGKI+ LIDI
Sbjct: 766  ADELEYELFRQFLGAKSKGASMSVAADSWLAFMDLLLMLRDDDVDGMHSLKGKILHLIDI 825

Query: 2702 YYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAVLQ 2881
            YYDALDAPKSGKKV +P +LKA  +PHYMER    SYHS+SILGQIYD V +Y +E +  
Sbjct: 826  YYDALDAPKSGKKVSIPHDLKANRFPHYMERGNPFSYHSTSILGQIYDYVDSYPDEDLCI 885

Query: 2882 REVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKYKQLLYE 3061
             E+ KL CFD+ IP+  + +W  RYE Y+K+M  A+ SG E KN A NEVIKKYK+LLY 
Sbjct: 886  TEISKLPCFDVEIPDECMALWGERYEEYKKDMTMAMNSGCEVKNSACNEVIKKYKKLLYG 945

Query: 3062 APDMEESSKNTQVIYEEAVAIYHVIYEYAMI-HGVEKCSFAWRVAGSALCNLCAWRIAGP 3238
            AP+ E+S + T+ I+ EA+A+YHV Y+ A I + +EKC FAW+VAGSALC + A      
Sbjct: 946  APEFEQSVRKTKDIFNEALALYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMY---H 1002

Query: 3239 KEKPLTILPSVLRD 3280
            KE    ILPS+L+D
Sbjct: 1003 KENAFPILPSILQD 1016


>ref|XP_010322170.1| PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum] gi|723706114|ref|XP_010322171.1| PREDICTED:
            probable RNA-dependent RNA polymerase 3 [Solanum
            lycopersicum]
          Length = 1014

 Score =  976 bits (2522), Expect = 0.0
 Identities = 533/1036 (51%), Positives = 702/1036 (67%), Gaps = 7/1036 (0%)
 Frame = +2

Query: 194  LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYVSY 373
            LP S+E ++ RIC+E+ Q P     R+ L+ IGE+ S+E+L  I+S +    S S ++ Y
Sbjct: 16   LPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEML-KIISRRPIKKSLSAFLVY 74

Query: 374  LIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXXXX 553
            +I R         LS+  SP  +   +R  SP  + P    ++L GE             
Sbjct: 75   MIDR-----YPDCLSSSSSP-FNCLLKRSSSP-RLFPSPEGKRLQGE------------- 114

Query: 554  XXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTT--VSQQLMVLN 727
                  K ++  + C       + +K    V RQ S   E       T+  VSQQLM+LN
Sbjct: 115  -SSSKSKLEMGLLAC------ASPQK----VARQLSFCEEPESNCRRTSPYVSQQLMILN 163

Query: 728  KLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDR 907
            +LE+RKLFLVLSYIG  KLE V++   A++I   K+L M  FES+IW  +G+     SDR
Sbjct: 164  ELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKKNLSMTDFESEIWNAFGKACYAVSDR 223

Query: 908  SQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVT 1087
            S+YL W+  KTHIY CH+ ++G   FKGPYLN+ R HLQR+LGDD +L VKF+ED +   
Sbjct: 224  SKYLDWNCRKTHIYYCHIKQNGYCSFKGPYLNTLRTHLQRALGDDNVLIVKFVEDTS-CA 282

Query: 1088 DKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDG 1267
            + I+EEGILVG  RYRFFV+KD+++R K   M   K AS   +KCYFVR +S+    D  
Sbjct: 283  NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKTAS---LKCYFVRFESIGTCNDGE 339

Query: 1268 NYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQ 1447
            +Y+ S K IS+ARC+FMH++ VS + KY AR SLILSKTIKL+ DL   T+E IEDI  +
Sbjct: 340  SYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIERIEDILCR 399

Query: 1448 DENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNSGDAA 1615
            DENG II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI+D ++E    IV+  D  
Sbjct: 400  DENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVDIVDLDDVN 459

Query: 1616 CQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPK 1795
             ++R + +RN++PPLLMQCRLF  G AVKGT LVNRK+    I IRPSM+KVE D  +  
Sbjct: 460  VERRVSVSRNRKPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISS 519

Query: 1796 EETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAA 1975
              TF+SLEIVAIS+RP + YLSK LI+LLSYGGV +E+F+ LL +ALEET+ VY  +RAA
Sbjct: 520  IPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQVYLRKRAA 579

Query: 1976 LRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLM 2155
            L+VA N+  +D   +  RMIS+G+PLNEP+L   LS L + E+TKL+ GK+PIS+SFYLM
Sbjct: 580  LKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLPISDSFYLM 639

Query: 2156 GTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKY 2335
            GTADPTGVL ++EVC+ILD G +SG+VLVYRNPG+HFGDVH+MKA YV+E+ +VVG+AKY
Sbjct: 640  GTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKY 699

Query: 2336 GIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKRNPQE 2515
            GIFFSTKG RSAA E+A GDFDGDMYW+S N +L+  +  + PW R++S P++  + P E
Sbjct: 700  GIFFSTKGPRSAATEIANGDFDGDMYWVSINRKLVDSYTTSRPWIRMHSTPNAVSKKPSE 759

Query: 2516 FSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKIIQLI 2695
            FS                    +M+ AA+SWL FMDRLLTL DD   + + LKGK++ LI
Sbjct: 760  FSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLTLRDDNVDDMHSLKGKMLHLI 819

Query: 2696 DIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAV 2875
            DIYYDALDAPKSGKKV +P  LKA  +PHYME+    SYHS+SILGQIYD V +Y +E +
Sbjct: 820  DIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDL 879

Query: 2876 LQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKYKQLL 3055
               E+ KL CF++ IP+  + +W+ RYE Y+K+M  A+    E +  + NEVIKKYK LL
Sbjct: 880  CITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLL 939

Query: 3056 YEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMI-HGVEKCSFAWRVAGSALCNLCAWRIA 3232
            Y A + E++ + T+ I++EA+AIYHV Y+ A I + +EKC FAW+VAGSALC + A    
Sbjct: 940  YGAVEFEQTVRKTEDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMY-- 997

Query: 3233 GPKEKPLTILPSVLRD 3280
              KEK L ILPSVL++
Sbjct: 998  -RKEKDLPILPSVLQE 1012


>ref|XP_015077971.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
            3 [Solanum pennellii]
          Length = 1018

 Score =  965 bits (2495), Expect = 0.0
 Identities = 526/1036 (50%), Positives = 700/1036 (67%), Gaps = 7/1036 (0%)
 Frame = +2

Query: 194  LPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSSKKTITSFSGYVSY 373
            LP S+E +++RIC+E+ Q P     R+ L+ IGE+ S+E+L  I+S +    S S ++ Y
Sbjct: 20   LPYSVETMLERICKEQGQKPPCTGIRRRLSSIGEKGSLEML-KIISRRPIKKSLSAFLVY 78

Query: 374  LIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSPSSISPYISTQKLNGEXXXXXXXXXXXXX 553
            +I R         LS+  SP  ++  +R  SP  + P    +++ GE             
Sbjct: 79   MIDR-----YPDCLSSSSSP-FNSLLKRSSSP-LLFPSPEGKRVQGE------------- 118

Query: 554  XXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTT--VSQQLMVLN 727
                  K ++  + C       + +K    V RQ S   E    +  T+  VSQQLM+LN
Sbjct: 119  -SSSKSKLEMGFLAC------ASPQK----VARQLSFCEEPESNSRRTSPYVSQQLMILN 167

Query: 728  KLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDR 907
            +LE+RKLFLVLSYIG  KLE V++   A++I    +L M  FES+IW  +G+     SDR
Sbjct: 168  ELEFRKLFLVLSYIGCNKLEDVISPQIADDIVRKNNLSMTDFESEIWNAFGKACYAVSDR 227

Query: 908  SQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVT 1087
            S+YL W+  KTHIY CH+ ++G   FKGPYLN+ R HLQR+LGDD +L VKF+ED +   
Sbjct: 228  SKYLDWNCRKTHIYYCHIKQNGYCTFKGPYLNTVRTHLQRALGDDNVLIVKFVEDTS-CA 286

Query: 1088 DKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDG 1267
            + I+EEGILVG  RYRFFV+KD+++R K   M   K AS   +KCYFVR +S+    D  
Sbjct: 287  NIILEEGILVGLRRYRFFVYKDDKERKKSPAMMKTKTAS---LKCYFVRFESIGTCNDGE 343

Query: 1268 NYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQ 1447
            +Y+ S K IS+ARC+FMH++ VS + KY AR SLILSKTIKL+ DL   T+E IEDI  +
Sbjct: 344  SYVFSTKTISQARCKFMHVHMVSNMAKYAARLSLILSKTIKLQTDLDSVTIERIEDILCR 403

Query: 1448 DENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFE----IVNSGDAA 1615
            DENG II DEDG+P +HTDGTG+ISEDLAM CPKDFS A+YI+D ++E    IV+  D  
Sbjct: 404  DENGCIIQDEDGEPRIHTDGTGFISEDLAMHCPKDFSKAEYIKDENYENFVDIVDLDDVN 463

Query: 1616 CQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPK 1795
             ++R + +RN+EPPLLMQCRLF  G AVKGT LVNRK+    I IRPSM+KVE D  +  
Sbjct: 464  VERRASVSRNREPPLLMQCRLFFNGCAVKGTFLVNRKIGSRKIHIRPSMVKVEIDPTISS 523

Query: 1796 EETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRNVYSNRRAA 1975
              TF+SLEIVAIS+RP + YLSK LI+LLSYGGV +E+F+ LL +ALEET+ V   +RAA
Sbjct: 524  IPTFDSLEIVAISHRPNKAYLSKNLISLLSYGGVHKEYFMELLGSALEETKQVRLRKRAA 583

Query: 1976 LRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIPISESFYLM 2155
            L+VA N+  +D   +  RMIS+G+PLNEP+L   LS L + E+TKL+ GK+PI++SFYLM
Sbjct: 584  LKVAINYREMDDECLTARMISSGIPLNEPHLHARLSRLAKIERTKLRGGKLPINDSFYLM 643

Query: 2156 GTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKY 2335
            GTADPTGVL ++EVC+ILD G +SG+VLVYRNPG+HFGDVH+MKA YV+E+ +VVG+AKY
Sbjct: 644  GTADPTGVLESNEVCVILDNGQVSGRVLVYRNPGLHFGDVHVMKARYVEELADVVGDAKY 703

Query: 2336 GIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPDSKKRNPQE 2515
            GIFFSTKG R AA E+A GDFDGDMYW+S N +++  +  + PW R++S P +  + P E
Sbjct: 704  GIFFSTKGPRXAATEIANGDFDGDMYWVSINRKVVDSYTTSRPWIRMHSTPKAVSKKPSE 763

Query: 2516 FSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEKNYLKGKIIQLI 2695
            FS                    +M+ AA+SWL FMDRLL L DD   + + LKGK++ LI
Sbjct: 764  FSADELEYELFRQFLEAKSKGANMSLAADSWLAFMDRLLMLRDDNVDDMHSLKGKMLHLI 823

Query: 2696 DIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAV 2875
            DIYYDALDAPKSGKKV +P  LKA  +PHYME+    SYHS+SILGQIYD V +Y +E +
Sbjct: 824  DIYYDALDAPKSGKKVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDL 883

Query: 2876 LQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAANEVIKKYKQLL 3055
               E+ KL CF++ IP+  + +W+ RYE Y+K+M  A+    E +  + NEVIKKYK LL
Sbjct: 884  CITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNLDCELRITSCNEVIKKYKMLL 943

Query: 3056 YEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMI-HGVEKCSFAWRVAGSALCNLCAWRIA 3232
            Y A + E++ + T+ I++EA+AIYHV Y+ A I + +EKC FAW+VAGSALC + A    
Sbjct: 944  YGAVEFEQTVRKTEDIFDEALAIYHVTYDNARIAYSIEKCGFAWKVAGSALCRIHAMY-- 1001

Query: 3233 GPKEKPLTILPSVLRD 3280
              KEK L ILPS+L++
Sbjct: 1002 -RKEKDLPILPSLLQE 1016


>ref|XP_009760371.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana sylvestris]
          Length = 1058

 Score =  951 bits (2459), Expect = 0.0
 Identities = 512/1050 (48%), Positives = 692/1050 (65%), Gaps = 19/1050 (1%)
 Frame = +2

Query: 182  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 355
            + ++LP S+E+++ +IC+ + Q P+    R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 15   EVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIKKTL--- 71

Query: 356  SGYVSYLIKRDYTIEAAKVL---------SAYGSPQVSTQTQRMLSPSSISPYISTQKLN 508
            SG++ ++ K+ Y  E  +           S + SPQ+  Q   + SP+S S  ++    N
Sbjct: 72   SGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQI--QRISLSSPNSSSSSVNFSPRN 129

Query: 509  GEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVA 688
            G                     +D  +   ++     + E+ +F       +  E+R  A
Sbjct: 130  GPLFQATVHNNVGDG-------SDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRA 182

Query: 689  ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 868
                +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES IW
Sbjct: 183  GIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIW 242

Query: 869  ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKI 1048
              YG   C+   R QYL WDSG++H Y CHV  DGSY FKGPYL + R HLQ+SLGD+ I
Sbjct: 243  TKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENI 301

Query: 1049 LTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYF 1228
            L V+F+E+      +IV+ GIL+G  RY FFV+KD+ K  KKN M+ E+K     VKCYF
Sbjct: 302  LVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGK--KKNSMDKEEKID--TVKCYF 357

Query: 1229 VRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLA 1408
            VR++S+ PY ++  YIL  K + +ARCRFMH++ VS++ KYMARFSLILS T+KL+VDL 
Sbjct: 358  VRMESLNPY-ENLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLN 416

Query: 1409 DATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIR---D 1579
               ++ IEDI   D+NG  ++DEDGKP++HTDGTGYISEDLA +CP+DF   KY     +
Sbjct: 417  SVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLE 476

Query: 1580 NSFEIVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPS 1759
                 V  G+ + +   AE ++ EPPLLMQCRLF+ G AVKGTLLVNRKL   TIQIRPS
Sbjct: 477  RYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPS 536

Query: 1760 MIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALE 1939
            MIKVE D K+ +   FNSLEIV  S +PR  YLS+ LIALL+YGGVP E+F ++L N LE
Sbjct: 537  MIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLE 596

Query: 1940 ETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKE 2119
            ET+ +YS+   AL+VA+NH   D A +A  MI   VPL EPYL+ CLS+L + E+  LK 
Sbjct: 597  ETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERNGLKG 656

Query: 2120 GKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYV 2299
            GK+PIS++FYLMGTADPT  LN  EVC+IL+ G ISG+VLVYRNPG+HFGD+H + AV V
Sbjct: 657  GKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPV 716

Query: 2300 KEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVY 2479
            K + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YW+S+N +LLKY+ A+ PW R++
Sbjct: 717  KNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIH 776

Query: 2480 SIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATE 2659
            S P +  R P++FS                 P++ MA A+ SWL  MDRLL L  +  TE
Sbjct: 777  STPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTE 836

Query: 2660 K---NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSIL 2830
                  +K K+ +L D+YYDA+DAPKSG KV +P+ LK + +PH++E+  +  Y S+S+L
Sbjct: 837  NEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEE--YISTSVL 894

Query: 2831 GQIYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESK 3010
            G+IYDRV ++K EA +  E+ KL  F++ IPE  + +W+ RY+ YR EM +AL +  ESK
Sbjct: 895  GEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESK 954

Query: 3011 NDAANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHG-VEKCSFAWR 3187
            ND A+EV+KKYKQLLYEAPDMEES+++T  I+ +A+AIY V Y+YA   G V+KC FAW+
Sbjct: 955  NDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWK 1014

Query: 3188 VAGSALCNLCAWRIAGP-KEKPLTILPSVL 3274
            VAGSALC L A   A    +K + + PS+L
Sbjct: 1015 VAGSALCRLHAELHAKEHNQKIMAVSPSIL 1044


>ref|XP_009760370.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana sylvestris]
          Length = 1060

 Score =  951 bits (2459), Expect = 0.0
 Identities = 512/1050 (48%), Positives = 692/1050 (65%), Gaps = 19/1050 (1%)
 Frame = +2

Query: 182  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMI--LSSKKTITSF 355
            + ++LP S+E+++ +IC+ + Q P+    R++L  IGE+ S+++L+ I     KKT+   
Sbjct: 15   EVIKLPPSVEQMLNQICKNQRQNPIDEKVRRLLLSIGEEGSLDILSKISVCQIKKTL--- 71

Query: 356  SGYVSYLIKRDYTIEAAKVL---------SAYGSPQVSTQTQRMLSPSSISPYISTQKLN 508
            SG++ ++ K+ Y  E  +           S + SPQ+  Q   + SP+S S  ++    N
Sbjct: 72   SGFIVFMAKKYYQSETQQFYQQTPVSSAESFFQSPQI--QRISLSSPNSSSSSVNFSPRN 129

Query: 509  GEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVA 688
            G                     +D  +   ++     + E+ +F       +  E+R  A
Sbjct: 130  GPLFQATVHNNDIVGDG-----SDSPTSAPQMLSPPTSPERTNFRRDSHDPMPSEYRNRA 184

Query: 689  ESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIW 868
                +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    EI  M   PM  FES IW
Sbjct: 185  GIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGEILDMTCQPMAHFESYIW 244

Query: 869  ITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKI 1048
              YG   C+   R QYL WDSG++H Y CHV  DGSY FKGPYL + R HLQ+SLGD+ I
Sbjct: 245  TKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENI 303

Query: 1049 LTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYF 1228
            L V+F+E+      +IV+ GIL+G  RY FFV+KD+ K  KKN M+ E+K     VKCYF
Sbjct: 304  LVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGK--KKNSMDKEEKID--TVKCYF 359

Query: 1229 VRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLA 1408
            VR++S+ PY ++  YIL  K + +ARCRFMH++ VS++ KYMARFSLILS T+KL+VDL 
Sbjct: 360  VRMESLNPY-ENLTYILYDKIVHKARCRFMHVHMVSSMAKYMARFSLILSTTVKLQVDLN 418

Query: 1409 DATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIR---D 1579
               ++ IEDI   D+NG  ++DEDGKP++HTDGTGYISEDLA +CP+DF   KY     +
Sbjct: 419  SVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLE 478

Query: 1580 NSFEIVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPS 1759
                 V  G+ + +   AE ++ EPPLLMQCRLF+ G AVKGTLLVNRKL   TIQIRPS
Sbjct: 479  RYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRCTIQIRPS 538

Query: 1760 MIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALE 1939
            MIKVE D K+ +   FNSLEIV  S +PR  YLS+ LIALL+YGGVP E+F ++L N LE
Sbjct: 539  MIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPAEYFFDILNNTLE 598

Query: 1940 ETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKE 2119
            ET+ +YS+   AL+VA+NH   D A +A  MI   VPL EPYL+ CLS+L + E+  LK 
Sbjct: 599  ETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLCEPYLRCCLSSLAKEERNGLKG 658

Query: 2120 GKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYV 2299
            GK+PIS++FYLMGTADPT  LN  EVC+IL+ G ISG+VLVYRNPG+HFGD+H + AV V
Sbjct: 659  GKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPV 718

Query: 2300 KEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVY 2479
            K + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YW+S+N +LLKY+ A+ PW R++
Sbjct: 719  KNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYHASRPWCRIH 778

Query: 2480 SIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATE 2659
            S P +  R P++FS                 P++ MA A+ SWL  MDRLL L  +  TE
Sbjct: 779  STPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALMDRLLMLRKNNTTE 838

Query: 2660 K---NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSIL 2830
                  +K K+ +L D+YYDA+DAPKSG KV +P+ LK + +PH++E+  +  Y S+S+L
Sbjct: 839  NEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEKKEE--YISTSVL 896

Query: 2831 GQIYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESK 3010
            G+IYDRV ++K EA +  E+ KL  F++ IPE  + +W+ RY+ YR EM +AL +  ESK
Sbjct: 897  GEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESK 956

Query: 3011 NDAANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHG-VEKCSFAWR 3187
            ND A+EV+KKYKQLLYEAPDMEES+++T  I+ +A+AIY V Y+YA   G V+KC FAW+
Sbjct: 957  NDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWK 1016

Query: 3188 VAGSALCNLCAWRIAGP-KEKPLTILPSVL 3274
            VAGSALC L A   A    +K + + PS+L
Sbjct: 1017 VAGSALCRLHAELHAKEHNQKIMAVSPSIL 1046


>ref|XP_009603361.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1063

 Score =  946 bits (2446), Expect = 0.0
 Identities = 512/1046 (48%), Positives = 685/1046 (65%), Gaps = 15/1046 (1%)
 Frame = +2

Query: 182  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSS--KKTITSF 355
            +A++LP S+E+++ +IC+ + Q       R++L  IGE+ S+++L+ I  S  KKT+   
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIKKTL--- 72

Query: 356  SGYVSYLIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSP-----SSISPYISTQKLNGEXX 520
            SG++ ++ K+ Y  E  +      + QVS+      SP     S  SP  S+  +N    
Sbjct: 73   SGFIVFMAKKYYQSETQQFYQQQPT-QVSSAESFFQSPQIQRISLSSPNSSSSSINFSPR 131

Query: 521  XXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTT 700
                              +D  +   ++     + E+  F          E R  A    
Sbjct: 132  IGPLFQATVHNNDIVGDGSDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSEFRNRAGIQG 191

Query: 701  VSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYG 880
            +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM  FES IW  YG
Sbjct: 192  ISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAHFESCIWTKYG 251

Query: 881  QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVK 1060
               C+   R QYL WDSG++H Y CHV  DGSY FKGPYL + R HLQ+SLGD+ IL V+
Sbjct: 252  H-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENILVVR 310

Query: 1061 FLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRID 1240
            F+E+      +IV+ GILVG  RYRFFV+KD+ K  KKN M+ E+K     VKCYFVR++
Sbjct: 311  FMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGK--KKNSMDKEEKID--TVKCYFVRME 366

Query: 1241 SVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATV 1420
            S+ PY ++  YIL  K + EARCRFMH++ V ++ KYMARFSLILS T+KL+VDL    +
Sbjct: 367  SLNPY-ENLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKLQVDLNSVNI 425

Query: 1421 ETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFEIVN 1600
            + IEDI   D+NG  ++DEDGKP++HTDGTGYISEDLA +CP+DF   KY         N
Sbjct: 426  DRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERYPN 485

Query: 1601 S---GDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKV 1771
                G+++ +   AE ++ EPPLLMQCRLF+ G AVKGTLLVNRKL  GTIQIRPSMIKV
Sbjct: 486  GVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGTIQIRPSMIKV 545

Query: 1772 ERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRN 1951
            E D K+ +   FNSLEIV  S +PR  YLS+ LIALL+YGGVP E+F ++L N LEET+ 
Sbjct: 546  EADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDILNNTLEETQR 605

Query: 1952 VYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIP 2131
            +YS+   AL+VA+NH   D A +A  MI AGVPL EPYL+ CLS+L + E+  LK GK+P
Sbjct: 606  LYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERNGLKGGKLP 665

Query: 2132 ISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIE 2311
            IS++FYLMGTADPT  LN  EVC+IL+ G ISG+VLVYRNPG+HFGD+H + AV VK + 
Sbjct: 666  ISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKNLG 725

Query: 2312 EVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPD 2491
            +VVGNAKYGI FSTKG RSAA E+A GDFDGD YW+S+N +LLKY++A+ PW+R++S P 
Sbjct: 726  DVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASRPWSRIHSTPK 785

Query: 2492 SKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEK--- 2662
            +  R P +FS                 P++ MA A+ SWL  +DRLL L  +  TE    
Sbjct: 786  TLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLILRKNYTTENEET 845

Query: 2663 NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIY 2842
              +K K+ +L D+YYDA+DAPKSG KV +P+ LK + +PH++E+     Y S+S+LG+IY
Sbjct: 846  KTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KAEYISTSVLGEIY 903

Query: 2843 DRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAA 3022
            DRV ++K E     E+ KL  F++ IPE  + +W+ RY+ YR EM +AL +  ESKND A
Sbjct: 904  DRVKSFKAEEAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLA 963

Query: 3023 NEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHG-VEKCSFAWRVAGS 3199
            +EV+KKYKQLLYEA DMEES+++T  I+ +A+AIY V Y+YA   G V+KC FAW+VAGS
Sbjct: 964  DEVVKKYKQLLYEATDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGS 1023

Query: 3200 ALCNLCAWRIAGP-KEKPLTILPSVL 3274
            ALC L A   A    +K + + PS+L
Sbjct: 1024 ALCRLHAELHAKEHNQKVMAVSPSIL 1049


>ref|XP_009603362.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1061

 Score =  942 bits (2436), Expect = 0.0
 Identities = 512/1046 (48%), Positives = 685/1046 (65%), Gaps = 15/1046 (1%)
 Frame = +2

Query: 182  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSS--KKTITSF 355
            +A++LP S+E+++ +IC+ + Q       R++L  IGE+ S+++L+ I  S  KKT+   
Sbjct: 16   EAIKLPPSVEQMLNQICKNQRQNLPDKKVRRLLLSIGEEGSLDILSEISVSQIKKTL--- 72

Query: 356  SGYVSYLIKRDYTIEAAKVLSAYGSPQVSTQTQRMLSP-----SSISPYISTQKLNGEXX 520
            SG++ ++ K+ Y  E  +      + QVS+      SP     S  SP  S+  +N    
Sbjct: 73   SGFIVFMAKKYYQSETQQFYQQQPT-QVSSAESFFQSPQIQRISLSSPNSSSSSINFSPR 131

Query: 521  XXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEHREVAESTT 700
                              +D  +   ++     + E+  F          E R  A    
Sbjct: 132  IGPLFQATVHNNVGDG--SDSPTSAPQMLSPPMSPERTIFQRDLYDPTPSEFRNRAGIQG 189

Query: 701  VSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFESKIWITYG 880
            +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L    +I  M   PM  FES IW  YG
Sbjct: 190  ISEQLLALSNLEFRKLFLILHYIGRRKLEDVIMLHDVGDILDMTCQPMAHFESCIWTKYG 249

Query: 881  QKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLGDDKILTVK 1060
               C+   R QYL WDSG++H Y CHV  DGSY FKGPYL + R HLQ+SLGD+ IL V+
Sbjct: 250  H-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAFKGPYLKAERTHLQQSLGDENILVVR 308

Query: 1061 FLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAVKCYFVRID 1240
            F+E+      +IV+ GILVG  RYRFFV+KD+ K  KKN M+ E+K     VKCYFVR++
Sbjct: 309  FMEEAPRCPQEIVKNGILVGLRRYRFFVYKDDGK--KKNSMDKEEKID--TVKCYFVRME 364

Query: 1241 SVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLEVDLADATV 1420
            S+ PY ++  YIL  K + EARCRFMH++ V ++ KYMARFSLILS T+KL+VDL    +
Sbjct: 365  SLNPY-ENLTYILHNKIVHEARCRFMHVHMVPSMAKYMARFSLILSTTVKLQVDLNSVNI 423

Query: 1421 ETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIRDNSFEIVN 1600
            + IEDI   D+NG  ++DEDGKP++HTDGTGYISEDLA +CP+DF   KY         N
Sbjct: 424  DRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKYKNAKLERYPN 483

Query: 1601 S---GDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQIRPSMIKV 1771
                G+++ +   AE ++ EPPLLMQCRLF+ G AVKGTLLVNRKL  GTIQIRPSMIKV
Sbjct: 484  GVELGESSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPRGTIQIRPSMIKV 543

Query: 1772 ERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLMNALEETRN 1951
            E D K+ +   FNSLEIV  S +PR  YLS+ LIALL+YGGVP E+F ++L N LEET+ 
Sbjct: 544  EADPKLSRARMFNSLEIVTPSFKPRNTYLSRTLIALLTYGGVPGEYFFDILNNTLEETQR 603

Query: 1952 VYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKTKLKEGKIP 2131
            +YS+   AL+VA+NH   D A +A  MI AGVPL EPYL+ CLS+L + E+  LK GK+P
Sbjct: 604  LYSDEVTALKVAANHRDRDDASIATGMIMAGVPLCEPYLRCCLSSLAKEERNGLKGGKLP 663

Query: 2132 ISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMKAVYVKEIE 2311
            IS++FYLMGTADPT  LN  EVC+IL+ G ISG+VLVYRNPG+HFGD+H + AV VK + 
Sbjct: 664  ISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEVLVYRNPGLHFGDIHRLLAVPVKNLG 723

Query: 2312 EVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPWNRVYSIPD 2491
            +VVGNAKYGI FSTKG RSAA E+A GDFDGD YW+S+N +LLKY++A+ PW+R++S P 
Sbjct: 724  DVVGNAKYGILFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLKYYRASRPWSRIHSTPK 783

Query: 2492 SKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDDRATEK--- 2662
            +  R P +FS                 P++ MA A+ SWL  +DRLL L  +  TE    
Sbjct: 784  TLHREPNDFSAEEMEHELFQTFLETRMPNYSMADASSSWLALVDRLLILRKNYTTENEET 843

Query: 2663 NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHSSSILGQIY 2842
              +K K+ +L D+YYDA+DAPKSG KV +P+ LK + +PH++E+     Y S+S+LG+IY
Sbjct: 844  KTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLEK--KAEYISTSVLGEIY 901

Query: 2843 DRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESGDESKNDAA 3022
            DRV ++K E     E+ KL  F++ IPE  + +W+ RY+ YR EM +AL +  ESKND A
Sbjct: 902  DRVKSFKAEEAAAVEIKKLPAFEVKIPETCLRLWEERYKKYRFEMMQALNTSSESKNDLA 961

Query: 3023 NEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHG-VEKCSFAWRVAGS 3199
            +EV+KKYKQLLYEA DMEES+++T  I+ +A+AIY V Y+YA   G V+KC FAW+VAGS
Sbjct: 962  DEVVKKYKQLLYEATDMEESARSTTDIFNDALAIYRVTYDYAKAIGDVKKCGFAWKVAGS 1021

Query: 3200 ALCNLCAWRIAGP-KEKPLTILPSVL 3274
            ALC L A   A    +K + + PS+L
Sbjct: 1022 ALCRLHAELHAKEHNQKVMAVSPSIL 1047


>ref|XP_010313737.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            lycopersicum]
          Length = 1054

 Score =  927 bits (2397), Expect = 0.0
 Identities = 507/1056 (48%), Positives = 681/1056 (64%), Gaps = 23/1056 (2%)
 Frame = +2

Query: 182  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSS--KKTITSF 355
            + V LP S++++I +IC+++ Q       R++L  IGE+ S+ +L  I     KKT+   
Sbjct: 10   EEVELPSSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEISKCQIKKTL--- 66

Query: 356  SGYVSYLIKRDYTIEAAK----------VLSA---YGSPQVSTQTQRMLSPSSISPYIST 496
            SG++ ++ K+ Y  E  +          VLSA   Y SPQ+   +  + SP+S    ++ 
Sbjct: 67   SGFIVFMAKKYYQSETQQFYQKQNHEQPVLSAESFYHSPQIRRNS--LSSPNSSCSSVNF 124

Query: 497  QKLNGEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKRQSSLAGEH 676
               N                      +D  +    +     +    SF          + 
Sbjct: 125  SPRN---------RPIFQDRDIVGDTSDSPTSGPRIPSPPLSPVTTSFQKCHYDPSPSKF 175

Query: 677  REVAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMKDLPMEVFE 856
            R+ A +  +S+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I  M   PM  FE
Sbjct: 176  RDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDVGDILDMIYQPMSHFE 235

Query: 857  SKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTRNHLQRSLG 1036
            S IW  YG   C+ + R QYL WDSG+TH+Y CHV  D SY FKGPYL + R HLQ SLG
Sbjct: 236  SYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAERTHLQHSLG 294

Query: 1037 DDKILTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENEKKASYSAV 1216
            D+ +L VKF ++     ++IV+ GILVG  RYRFFV+KD+ K+    +   +K+    +V
Sbjct: 295  DENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKK----RRLKDKEEKIDSV 350

Query: 1217 KCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLILSKTIKLE 1396
            KCYFVR++S+ PY ++  YIL  K + EARC FMH++ VS++ KYMARFSLILS T+KL+
Sbjct: 351  KCYFVRMESLNPYENE-TYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLILSTTVKLQ 409

Query: 1397 VDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKDFSTAKYIR 1576
            VDL    ++ IEDI   D++G II+DEDGKP++HTDGTGYISEDLA +CP+DF   K+  
Sbjct: 410  VDLNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQDFFNVKHKC 469

Query: 1577 DNSFEIVNS---GDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNRKLEPGTIQ 1747
             N     N    G+ + +   AE ++ EPPLLMQCRLF+ G AVKGTLLVNRKL   TIQ
Sbjct: 470  ANLVRYANGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNRKLPQRTIQ 529

Query: 1748 IRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQEFFLNLLM 1927
            IRPSMIKVE D ++ +   FNSLEI   S +PR  YLS+ LIALL+YGGVP E+F ++L 
Sbjct: 530  IRPSMIKVEADPRLSRAHMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPVEYFYDILN 589

Query: 1928 NALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLSNLERGEKT 2107
            N LEET+ +YS+   AL+VA NH   D A  A  MI AGVPL EPYL  CLS+L + E+ 
Sbjct: 590  NTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLSSLAKEERN 649

Query: 2108 KLKEGKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMHFGDVHIMK 2287
             LK G++PI+++FYLMGTADPT  LN  EVC+IL+ G I G+VL+YRNPG+HFGD+H + 
Sbjct: 650  GLKGGRLPIADTFYLMGTADPTDTLNRHEVCVILEHGQIFGEVLIYRNPGLHFGDIHRLL 709

Query: 2288 AVYVKEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLKYFKANEPW 2467
            AV VK + ++VGNAKYGIFFSTKG RSAA E+A GDFDGD YWIS+N +LLKYF A+ PW
Sbjct: 710  AVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWISQNPQLLKYFTASRPW 769

Query: 2468 NRVYSIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMDRLLTLGDD 2647
            +R++S P +  R P  FS                 P++ MA A+ +W   MDRLL LG +
Sbjct: 770  SRIHSTPKALHREPNNFSAEEREHELFQTFLETRMPNYSMADASANWYALMDRLLILGKN 829

Query: 2648 RATEK---NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMERWPDLSYHS 2818
               E      +K K+ +LID+YYDA+DAPKSG KV +P+ LK + +PH++++    SYHS
Sbjct: 830  NTIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQK--KESYHS 887

Query: 2819 SSILGQIYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKEMKEALESG 2998
            +S+LG+IYDRV  +K E  +  E+ KL  F++ IPE  + +W+ RY  YR EMKEAL + 
Sbjct: 888  TSVLGEIYDRVEKFKAEEPVAVEIKKLPAFEVGIPETCLRLWEERYRKYRFEMKEALNTS 947

Query: 2999 DESKNDAANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMIHG-VEKCS 3175
             ESKND A++VIKKYKQLLYEAPDMEES ++T  IY +A+AIY V Y+YA   G V KC 
Sbjct: 948  SESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDIYNDALAIYRVTYDYAKAIGDVRKCG 1007

Query: 3176 FAWRVAGSALCNLCAWRIAGP-KEKPLTILPSVLRD 3280
            FAW+VAG+ALC L A   A    +K + + PS+L +
Sbjct: 1008 FAWKVAGTALCRLHAELHAKEHNQKVMAMSPSILHN 1043


>emb|CDP03268.1| unnamed protein product [Coffea canephora]
          Length = 875

 Score =  927 bits (2396), Expect = 0.0
 Identities = 484/891 (54%), Positives = 635/891 (71%), Gaps = 8/891 (0%)
 Frame = +2

Query: 632  RSFSVKRQSSLAGE----HREVAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVT 799
            ++  V RQ   +GE     +++       Q+ ++ +KLEYRKLFL+ SYIGR+K E VV+
Sbjct: 3    KASKVTRQLQFSGEPECNEKKITPEVFSYQRTLLTSKLEYRKLFLIYSYIGRRKFEDVVS 62

Query: 800  LDGANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSY 979
             D A++I  MKDLPM  FES+IW  YG+++   +DR Q   WD+GKTH+Y C+V  DGS 
Sbjct: 63   DDDADQILEMKDLPMGNFESRIWDAYGKRYVP-ADRRQSTEWDTGKTHLYYCYVYADGSC 121

Query: 980  YFKGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDER 1159
             FKGP L++T  HLQR+LGDD IL VKF EDG    D+I++EGILVG   Y+FF  K   
Sbjct: 122  SFKGPCLDTTSTHLQRTLGDDNILIVKFAEDGRSCIDRILKEGILVGLRCYQFFGTK--- 178

Query: 1160 KRVKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVST 1339
               K+ +ME +K +   AV+CYFV  DS+   G+  +Y L    +++ARC FMH++ VS+
Sbjct: 179  ---KQKEMEKDKTSLSPAVRCYFVNYDSIAARGNSESYSLCPSNLNKARCHFMHVHMVSS 235

Query: 1340 IEKYMARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYI 1519
            + KYMARFSLILSKTIKL VDL+   +E+IEDIP +DENG  I DEDG+ ++ TDGTG+I
Sbjct: 236  LAKYMARFSLILSKTIKLPVDLSSIVIESIEDIPCRDENGDEILDEDGEVLVLTDGTGFI 295

Query: 1520 SEDLAMQCPKDFSTAKYIRDNSFEIVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYAV 1699
            SEDLA++CP++F +AK+++DN FE+             E  +   PLLMQCRLF  G AV
Sbjct: 296  SEDLALKCPQNFCSAKFLKDNDFEVT----CYAYNEEFECLDHPNPLLMQCRLFSRGLAV 351

Query: 1700 KGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIAL 1879
            KGTLLVNRK       IR SM+KV+RD + P   TF+SLEIVA+S++PRR  LSK LIAL
Sbjct: 352  KGTLLVNRK-------IRSSMVKVKRDIRCPVAPTFDSLEIVAVSHKPRRCQLSKNLIAL 404

Query: 1880 LSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNE 2059
            LSYGGVP+ FFL++L   LEET+ +++N  AAL+V+  +  +D  +   RMI AGVPL+E
Sbjct: 405  LSYGGVPRNFFLDILRTVLEETQALFTNLHAALKVSIRNGDMDDGWTTARMILAGVPLSE 464

Query: 2060 PYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVL 2239
            P+LQ  L+ L   E+  LKEGK+PISESFY+MGTADPTG+L  +EVC+IL+ G ISGKVL
Sbjct: 465  PHLQDRLAKLANFERKSLKEGKLPISESFYVMGTADPTGLLKANEVCVILENGQISGKVL 524

Query: 2240 VYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWI 2419
            VYRNPG+HFGDVH+++AVYVKE+E+V+GNAK+GIFFSTKG RS A E+A GDFDGDMYW+
Sbjct: 525  VYRNPGLHFGDVHVLEAVYVKELEDVIGNAKFGIFFSTKGQRSVANEIANGDFDGDMYWV 584

Query: 2420 SRNSELLKYFKANEPWNRVYSIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAA 2599
            SRN +LLKYF+A+EPW RVYS P ++ + P +FS                  SF+MA AA
Sbjct: 585  SRNPQLLKYFRASEPWTRVYSSPPAENKKPSDFSAEALEYELFRLSLEKRKQSFNMAVAA 644

Query: 2600 ESWLTFMDRLLTLGDDRATEKNYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYP 2779
             SWL FMDRLL L D+ A + + L+ +I++L+DIYYDALDAPKSGKKV VP +L A+ YP
Sbjct: 645  HSWLAFMDRLLVLRDENAGDTDGLRQQILKLVDIYYDALDAPKSGKKVNVPSDLIAKSYP 704

Query: 2780 HYMERWPDLSYHSSSILGQIYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYE 2959
            HYM +    SYHS+SILG I+D+   +++E     E+WKL CF+  IPE Y++MW ARY+
Sbjct: 705  HYMGK--GNSYHSTSILGDIFDQTEQFQSERRSIGEIWKLPCFNSRIPEEYLSMWMARYD 762

Query: 2960 SYRKEMKEALE---SGDESKNDAANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYH 3130
             YR EM++ALE   + D+ KN AA+ VIKKYK+LLYEA +++ES K  + I  EA+AIYH
Sbjct: 763  DYRYEMRDALEQNPADDDLKNKAADRVIKKYKELLYEAAELQESKKKMEEINNEALAIYH 822

Query: 3131 VIYEYAMIHG-VEKCSFAWRVAGSALCNLCAWRIAGPKEKPLTILPSVLRD 3280
            V Y++A+  G + KCSFAWRVAGSALCNL A       E P+ ++PSVLR+
Sbjct: 823  VSYDHAIGRGCISKCSFAWRVAGSALCNLHASN-TSTNEYPMLVVPSVLRN 872


>ref|XP_015059191.1| PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum
            pennellii]
          Length = 1054

 Score =  924 bits (2387), Expect = 0.0
 Identities = 505/1064 (47%), Positives = 684/1064 (64%), Gaps = 31/1064 (2%)
 Frame = +2

Query: 182  QAVRLPESIERIIKRICQEKNQPPLKYYARKMLAEIGEQASMELLTMILSS--KKTITSF 355
            + V LP S++++I +IC+++ Q       R++L  IGE+ S+ +L  I     KKT+   
Sbjct: 10   EEVELPPSVQQMINQICKKERQNSPDDTVRRLLVAIGEERSLYILNEISKCQIKKTL--- 66

Query: 356  SGYVSYLIKRDYTIEAAKVL-------------SAYGSPQV--STQTQRMLSPSSIS--- 481
            SG++ ++ K+ Y  E  +               S Y SPQ+  ++ + +  S SS++   
Sbjct: 67   SGFIVFMAKKYYQSETQQFYQKQNYEQPVPSAESFYHSPQIRRNSLSSQNSSCSSVNFSP 126

Query: 482  ---PYISTQKLNGEXXXXXXXXXXXXXXXXXXXKTDLQSICCELSFDDETQEKRSFSVKR 652
               P    + + GE                    +D  +    +     +    SF    
Sbjct: 127  KNRPIFQDRDIVGEA-------------------SDSPTSAPRIPSPPMSPVTTSFQRCH 167

Query: 653  QSSLAGEHREVAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLDGANEIHSMK 832
                  + R+ A +  +S+QL+ LNKLE+RK FL+L+YIGR+K+E V+TL    +I  M 
Sbjct: 168  YDPSPSKFRDRASTRGISEQLLALNKLEFRKFFLILNYIGRRKVEDVITLHDIGDILDMI 227

Query: 833  DLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYFKGPYLNSTR 1012
              PM  FES IW  YG   C+ + R QYL WDSG+TH+Y CHV  D SY FKGPYL + R
Sbjct: 228  YQPMSHFESYIWNKYGH-LCEHNKRVQYLDWDSGRTHLYHCHVHSDRSYTFKGPYLKAER 286

Query: 1013 NHLQRSLGDDKILTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKRVKKNKMENE 1192
             HLQ SLGD+ +L VKF ++     ++IV+ GILVG  RYRFFV+KD+ K+    +   +
Sbjct: 287  THLQHSLGDENVLIVKFEQNTPGCPEEIVQNGILVGLRRYRFFVYKDDGKK----RSSKD 342

Query: 1193 KKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIEKYMARFSLI 1372
            K+    +VKCYFVR++S+ PY ++  YIL  K + EARC FMH++ VS++ KYMARFSLI
Sbjct: 343  KEEKIDSVKCYFVRMESLNPYENE-TYILHDKMVHEARCNFMHVHMVSSMAKYMARFSLI 401

Query: 1373 LSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISEDLAMQCPKD 1552
            LS T+KL+VDL    ++ IEDI   D++G II+DEDGKP++HTDGTGYISEDLA +CP+D
Sbjct: 402  LSTTVKLQVDLNSVNIDRIEDIYCHDKSGRIIYDEDGKPLIHTDGTGYISEDLARKCPQD 461

Query: 1553 FSTAKYIRDNSFEIVNS---GDAACQKRGAEARNKEPPLLMQCRLFHGGYAVKGTLLVNR 1723
            F   K+   N     N    G+ + +   AE ++ EPPLLMQCRLF+ G AVKGTLLVN+
Sbjct: 462  FFNVKHKCANLERYTNGVKLGENSSELGEAEFQSGEPPLLMQCRLFYNGLAVKGTLLVNK 521

Query: 1724 KLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIALLSYGGVPQ 1903
            KL   TIQIRPSMIKVE D ++ + + FNSLEI   S +PR  YLS+ LIALL+YGGVP 
Sbjct: 522  KLPRRTIQIRPSMIKVEADPRLSRAQMFNSLEINTPSLKPRNTYLSRTLIALLTYGGVPV 581

Query: 1904 EFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLNEPYLQLCLS 2083
            E+F ++L N LEET+ +YS+   AL+VA NH   D A  A  MI AGVPL EPYL  CLS
Sbjct: 582  EYFYDILNNTLEETQRLYSDEVTALKVAVNHRDRDDASTATSMIMAGVPLTEPYLWCCLS 641

Query: 2084 NLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKVLVYRNPGMH 2263
            +L + E+  LK G++PI+++FYLMGTADPT  LN  EVC+IL+ G I G+VLVYRNPG+H
Sbjct: 642  SLAKEERNGLKGGRLPIADTFYLMGTADPTDTLNPHEVCVILEHGQIFGEVLVYRNPGLH 701

Query: 2264 FGDVHIMKAVYVKEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYWISRNSELLK 2443
            FGD+H + AV VK + ++VGNAKYGIFFSTKG RSAA E+A GDFDGD YW+S+N +LLK
Sbjct: 702  FGDIHKLLAVPVKNLGDIVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYWVSQNPQLLK 761

Query: 2444 YFKANEPWNRVYSIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATAAESWLTFMD 2623
            YF A+ PW+R++S P +  R P  FS                 P++ MA A+ +W   MD
Sbjct: 762  YFTASRPWSRIHSTPKALHREPNNFSAEEREHELFQTFLETRMPNYSMADASANWYALMD 821

Query: 2624 RLLTLGDDRATEK---NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKAEMYPHYMER 2794
            RLL LG +   E      +K K+ +LID+YYDA+DAPKSG KV +P+ LK + +PH++++
Sbjct: 822  RLLILGKNNTIENEETKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQK 881

Query: 2795 WPDLSYHSSSILGQIYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWKARYESYRKE 2974
                SYHS+S+LG+IYDRV  +K E  +  E+ KL  F++ IPE  + +W+ RY  YR E
Sbjct: 882  --KESYHSTSVLGEIYDRVEKFKAEEPVAVEIKKLPAFEVGIPETCLRLWEERYRKYRFE 939

Query: 2975 MKEALESGDESKNDAANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIYHVIYEYAMI 3154
            MKEAL +  ESKND A++VIKKYKQLLYEAPDMEES ++T  IY +A+AIY V Y+YA  
Sbjct: 940  MKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDIYNDALAIYRVTYDYAKA 999

Query: 3155 HG-VEKCSFAWRVAGSALCNLCAWRIAGP-KEKPLTILPSVLRD 3280
             G V KC FAW+VAG+ALC L A   A    +K + + PS+L +
Sbjct: 1000 IGDVRKCGFAWKVAGAALCRLHAELHAKEHNQKVMAMSPSILHN 1043


>ref|XP_009760372.1| PREDICTED: probable RNA-dependent RNA polymerase 5 isoform X3
            [Nicotiana sylvestris]
          Length = 905

 Score =  913 bits (2360), Expect = 0.0
 Identities = 476/891 (53%), Positives = 620/891 (69%), Gaps = 8/891 (0%)
 Frame = +2

Query: 626  EKRSFSVKRQSSLAGEHREVAESTTVSQQLMVLNKLEYRKLFLVLSYIGRQKLEAVVTLD 805
            E+ +F       +  E+R  A    +S+QL+ L+ LE+RKLFL+L YIGR+KLE V+ L 
Sbjct: 9    ERTNFRRDSHDPMPSEYRNRAGIQGISKQLLALSNLEFRKLFLILHYIGRRKLEDVIMLH 68

Query: 806  GANEIHSMKDLPMEVFESKIWITYGQKFCDKSDRSQYLGWDSGKTHIYCCHVCEDGSYYF 985
               EI  M   PM  FES IW  YG   C+   R QYL WDSG++H Y CHV  DGSY F
Sbjct: 69   DVGEILDMTCQPMAHFESYIWTKYGH-LCENVKRVQYLDWDSGRSHFYHCHVYSDGSYAF 127

Query: 986  KGPYLNSTRNHLQRSLGDDKILTVKFLEDGAYVTDKIVEEGILVGPWRYRFFVFKDERKR 1165
            KGPYL + R HLQ+SLGD+ IL V+F+E+      +IV+ GIL+G  RY FFV+KD+ K 
Sbjct: 128  KGPYLKAERTHLQQSLGDENILVVRFMEEAPRCPQEIVKNGILIGLRRYHFFVYKDDGK- 186

Query: 1166 VKKNKMENEKKASYSAVKCYFVRIDSVVPYGDDGNYILSGKRISEARCRFMHIYNVSTIE 1345
             KKN M+ E+K     VKCYFVR++S+ PY ++  YIL  K + +ARCRFMH++ VS++ 
Sbjct: 187  -KKNSMDKEEKID--TVKCYFVRMESLNPY-ENLTYILYDKIVHKARCRFMHVHMVSSMA 242

Query: 1346 KYMARFSLILSKTIKLEVDLADATVETIEDIPFQDENGSIIHDEDGKPILHTDGTGYISE 1525
            KYMARFSLILS T+KL+VDL    ++ IEDI   D+NG  ++DEDGKP++HTDGTGYISE
Sbjct: 243  KYMARFSLILSTTVKLQVDLNSVNIDRIEDIYCHDKNGRTLYDEDGKPLIHTDGTGYISE 302

Query: 1526 DLAMQCPKDFSTAKYIR---DNSFEIVNSGDAACQKRGAEARNKEPPLLMQCRLFHGGYA 1696
            DLA +CP+DF   KY     +     V  G+ + +   AE ++ EPPLLMQCRLF+ G A
Sbjct: 303  DLARKCPQDFFNVKYKNAKLERYSNGVEPGENSSEVGEAEFQSGEPPLLMQCRLFYNGLA 362

Query: 1697 VKGTLLVNRKLEPGTIQIRPSMIKVERDEKVPKEETFNSLEIVAISNRPRRNYLSKYLIA 1876
            VKGTLLVNRKL   TIQIRPSMIKVE D K+ +   FNSLEIV  S +PR  YLS+ LIA
Sbjct: 363  VKGTLLVNRKLPRCTIQIRPSMIKVEADPKLSRTRMFNSLEIVTPSFKPRNTYLSRTLIA 422

Query: 1877 LLSYGGVPQEFFLNLLMNALEETRNVYSNRRAALRVASNHDGLDFAFVAERMISAGVPLN 2056
            LL+YGGVP E+F ++L N LEET+ +YS+   AL+VA+NH   D A +A  MI   VPL 
Sbjct: 423  LLTYGGVPAEYFFDILNNTLEETQRLYSDEVTALKVAANHRDRDDASIATGMIMVVVPLC 482

Query: 2057 EPYLQLCLSNLERGEKTKLKEGKIPISESFYLMGTADPTGVLNNDEVCIILDIGPISGKV 2236
            EPYL+ CLS+L + E+  LK GK+PIS++FYLMGTADPT  LN  EVC+IL+ G ISG+V
Sbjct: 483  EPYLRCCLSSLAKEERNGLKGGKLPISDTFYLMGTADPTDTLNPHEVCVILEHGQISGEV 542

Query: 2237 LVYRNPGMHFGDVHIMKAVYVKEIEEVVGNAKYGIFFSTKGWRSAAYEMATGDFDGDMYW 2416
            LVYRNPG+HFGD+H + AV VK + +VVGNAKYGIFFSTKG RSAA E+A GDFDGD YW
Sbjct: 543  LVYRNPGLHFGDIHRLLAVPVKNLGDVVGNAKYGIFFSTKGPRSAATEIANGDFDGDKYW 602

Query: 2417 ISRNSELLKYFKANEPWNRVYSIPDSKKRNPQEFSDVXXXXXXXXXXXXXXXPSFDMATA 2596
            +S+N +LLKY+ A+ PW R++S P +  R P++FS                 P++ MA A
Sbjct: 603  VSQNPQLLKYYHASRPWCRIHSTPKALHREPKDFSAEEMEHELFQTFLETRMPNYSMADA 662

Query: 2597 AESWLTFMDRLLTLGDDRATEK---NYLKGKIIQLIDIYYDALDAPKSGKKVKVPQELKA 2767
            + SWL  MDRLL L  +  TE      +K K+ +L D+YYDA+DAPKSG KV +P+ LK 
Sbjct: 663  SSSWLALMDRLLMLRKNNTTENEETKTMKEKLFELTDLYYDAIDAPKSGNKVYIPKRLKV 722

Query: 2768 EMYPHYMERWPDLSYHSSSILGQIYDRVIAYKNEAVLQREVWKLSCFDIPIPEAYVNMWK 2947
            + +PH++E+  +  Y S+S+LG+IYDRV ++K EA +  E+ KL  F++ IPE  + +W+
Sbjct: 723  DKFPHFLEKKEE--YISTSVLGEIYDRVKSFKAEAAVAVEIKKLPAFEVKIPETCLRLWE 780

Query: 2948 ARYESYRKEMKEALESGDESKNDAANEVIKKYKQLLYEAPDMEESSKNTQVIYEEAVAIY 3127
             RY+ YR EM +AL +  ESKND A+EV+KKYKQLLYEAPDMEES+++T  I+ +A+AIY
Sbjct: 781  ERYKKYRFEMMQALNTSSESKNDLADEVVKKYKQLLYEAPDMEESARSTTDIFNDALAIY 840

Query: 3128 HVIYEYAMIHG-VEKCSFAWRVAGSALCNLCAWRIAGP-KEKPLTILPSVL 3274
             V Y+YA   G V+KC FAW+VAGSALC L A   A    +K + + PS+L
Sbjct: 841  RVTYDYAKAIGDVKKCGFAWKVAGSALCRLHAELHAKEHNQKIMAVSPSIL 891