BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00008218
         (3719 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposo...   810   0.0  
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]   798   0.0  
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo...   785   0.0  
gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposo...   767   0.0  
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo...   767   0.0  
gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposo...   778   0.0  
gb|KYP42321.1| Copia protein [Cajanus cajan]                          775   0.0  
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   776   0.0  
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo...   754   0.0  
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo...   761   0.0  
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo...   754   0.0  
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo...   755   0.0  
gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposo...   742   0.0  
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   746   0.0  
gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposo...   733   0.0  
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   728   0.0  
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi...   728   0.0  
gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposo...   722   0.0  
ref|XP_007024187.1| Cysteine-rich RLK (RECEPTOR-like protein kin...   718   0.0  
ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-r...   696   0.0  

>gb|KYP34293.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1376

 Score =  810 bits (2093), Expect = 0.0
 Identities = 420/801 (52%), Positives = 542/801 (67%), Gaps = 6/801 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G+VERKHQHLL V  ALLF SK+P  FW + +L A ++INR+  P+L NKTPF+ L+ + 
Sbjct: 601  GVVERKHQHLLNVTHALLFHSKLPYCFWSYALLHATYLINRITTPLLDNKTPFQKLYGQT 660

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
             D +  ++FGCL YVST TA R K   RA  CVF+G+   +KGY  YDL +  + ISR+V
Sbjct: 661  CDITELRVFGCLCYVSTSTANRKKLDPRAHPCVFLGFSPTTKGYITYDLHTRAITISRNV 720

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
             F EN FP  +  S S S    + PIS            F   +  +D+++   I+ D  
Sbjct: 721  SFYENHFPLLQSTS-STSNIPVVSPIS------------FGIHSPSHDLIS---ILPDPH 764

Query: 1852 NDFADAQHGLAAQNTTVVQTD-----PVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDC 2016
                  QH + + N      D     P ++  +   PN   LRRS+R R  PSYLQ Y  
Sbjct: 765  ------QHNVTSPNPATTSHDSISLAPYSTTADSLPPNSSPLRRSTRLRNPPSYLQDYHH 818

Query: 2017 KIPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKE 2196
             +  +  + H       G  YPI+ ++S  +LSN  +AF + IS ++EP SYA+A+K   
Sbjct: 819  SLTSTSTNLHP------GMLYPIEKYISYSRLSNDFQAFVSSISAVSEPHSYAEAAKHDC 872

Query: 2197 WQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQ 2376
            W  AM AE+ AL+ NQTW +T LP  K  +GC+W+YK+KY ++GSIERYKARLVAKGYTQ
Sbjct: 873  WLKAMHAELEALKMNQTWTLTPLPPHKQAVGCRWIYKIKYNADGSIERYKARLVAKGYTQ 932

Query: 2377 EEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYL 2556
             EGLDY  TFSPVAK+TTVRLL+ALAA   W L QLDVNNAFLHGDL+EEVYM  P G  
Sbjct: 933  VEGLDYLATFSPVAKLTTVRLLLALAAVFDWHLKQLDVNNAFLHGDLNEEVYMTLPLGMR 992

Query: 2557 QSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCV 2736
                 +VCKL KSLYGLKQASRQWF KL+S L+++G+ QS SD SLF      S T L +
Sbjct: 993  PEYSNQVCKLQKSLYGLKQASRQWFAKLSSFLIHHGYHQSASDHSLFMKFSSSSTTALLI 1052

Query: 2737 YVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDL 2916
            YVDDI+LAGN++S+I+ I   LD  F IKDLG LKY LG+EVAR+  GIH+ QRKY LD+
Sbjct: 1053 YVDDIVLAGNNLSEIQLITGLLDVAFKIKDLGNLKYFLGLEVARNKSGIHLSQRKYVLDI 1112

Query: 2917 LTETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTL 3096
            L++ G + S+P +TPMD  ++ S++  +PL D S YRRL+GR++YLT TRP++S+ +  L
Sbjct: 1113 LSDCGMMASRPVSTPMDYTSRLSASSGTPLADPSSYRRLLGRLIYLTTTRPDISYVVHHL 1172

Query: 3097 SQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISG 3276
            SQ++S P+T H  A  RI RY+K  P  GLF+ + S LHLK FSD+DWA C +TRRSI+G
Sbjct: 1173 SQFMSAPSTAHSQAIFRILRYLKQAPGSGLFFPTNSSLHLKAFSDSDWAGCLDTRRSITG 1232

Query: 3277 FAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIK-HPQSLMY 3453
            F+V+LGDSLISW+SKKQPT+SRSS+EAEYRA+A TT E+QWLTYLL D+H+  H  +L+Y
Sbjct: 1233 FSVYLGDSLISWRSKKQPTVSRSSSEAEYRALATTTSELQWLTYLLHDLHVPVHQPALLY 1292

Query: 3454 TDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPA 3633
             D++SA  I+ N   HERTKHI +DCH VREKLQ GL KL+ + S  Q ADIFTK L P+
Sbjct: 1293 CDNQSALHIAANQVFHERTKHIDIDCHLVREKLQSGLLKLLPVASPHQLADIFTKSLSPS 1352

Query: 3634 QFNYLISKLSMLNIHAPLEGG 3696
             F  L SKL MLN+++ LEGG
Sbjct: 1353 MFTALYSKLGMLNLYSQLEGG 1373


>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
          Length = 1128

 Score =  798 bits (2061), Expect = 0.0
 Identities = 414/763 (54%), Positives = 541/763 (70%), Gaps = 8/763 (1%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G VERKHQHLL VAR+L+FQSK+PLS W + +LTA H+IN  P+ IL+N+TP+++LF K 
Sbjct: 356  GRVERKHQHLLNVARSLMFQSKLPLSHWTNYVLTATHLINHTPSYILNNQTPYQLLFQKP 415

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            P+Y++F++F CL + ST+T  R KF  RA+KC+F+GYP   KGYK+ DL + K  +S +V
Sbjct: 416  PNYNYFEVFDCLCFASTITNNRGKFHPRATKCIFLGYPPNIKGYKVLDLTTLKTFVSXNV 475

Query: 1672 IFCENIFPF--QEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISD 1845
            +  E+ FP     I    V P+ P            +S S+  N         +  I S 
Sbjct: 476  LLHESTFPSIPNTIHXPFVFPDFPQIY---------ESKSYKPN--------NSVSITSG 518

Query: 1846 AQNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDC--- 2016
            + N         +   T+V+++    + I H+N +   LRRS R +  P YLQ Y C   
Sbjct: 519  STN---------STDPTSVIESSIPENTI-HANNDANSLRRSERTKHLPKYLQNYYCGNM 568

Query: 2017 -KIPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQK 2193
             KI  + Q+  S  +  SGK Y I  FLS  +LS+KHKAF   IS   EPK+Y Q     
Sbjct: 569  TKIDSATQAPSSCSS--SGKPYCIFSFLSDSRLSSKHKAFIYVISSTFEPKTYKQXVSIP 626

Query: 2194 EWQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYT 2373
             WQ AM  EI+AL+ N+TW +  LP +K  IGCKWVY+VK++++GS+ERYKARLVAKGYT
Sbjct: 627  HWQTAMTDEIKALKHNKTWDLAILPPNKTAIGCKWVYRVKFKADGSVERYKARLVAKGYT 686

Query: 2374 QEEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGY 2553
            Q+EGLD+FDT+SPVAK+TTVR+L+A+AAAK W+LHQLDVNNAFLHGDL+EEVYM  P G+
Sbjct: 687  QQEGLDFFDTYSPVAKMTTVRVLLAIAAAKQWYLHQLDVNNAFLHGDLNEEVYMQLPLGF 746

Query: 2554 LQSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILC 2733
               ND +VCKL KSLYGL+QASRQW+ KL+S LL +GF Q+K+DSSLF      S   L 
Sbjct: 747  STPNDPRVCKLKKSLYGLRQASRQWYSKLSSSLLKFGFSQAKTDSSLFIKQTSTSFIALL 806

Query: 2734 VYVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALD 2913
            +YVDD+I+A ND+ +I+ +K  L E FTIKDLG LKY +GIEVARS KGI + QRKYALD
Sbjct: 807  IYVDDVIIASNDLKEIDVVKKFLHESFTIKDLGELKYFVGIEVARSAKGIVLSQRKYALD 866

Query: 2914 LLTETGFLGSKPSTTPMDCKAQFSSNDSSP-LTDASQYRRLIGRMLYLTITRPELSFSIQ 3090
            +L ++GF GSKP   PM+   + ++NDSSP L+D + Y+RLIG++LYLTITR +L++ +Q
Sbjct: 867  VLKDSGFFGSKPIGFPMESSLKLTANDSSPLLSDPASYKRLIGKLLYLTITRLDLAYXVQ 926

Query: 3091 TLSQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSI 3270
             L+Q++S P +THL AA R+ RYIK+T  +GLF  ++S LHLK +SD+DW  C  TRRS+
Sbjct: 927  ALNQFMSNPHSTHLQAAERVLRYIKATLGQGLFLKASSDLHLKAYSDSDWGGCINTRRSV 986

Query: 3271 SGFAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQ-SL 3447
            +GF VF+GDSLISWKSKKQPTISRSSA+AEYRA+A TTCE+QWL YLL D+++KHPQ +L
Sbjct: 987  TGFTVFIGDSLISWKSKKQPTISRSSAKAEYRALATTTCELQWLVYLLVDLNVKHPQPAL 1046

Query: 3448 MYTDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLI 3576
            +YTDS+ A  I+ N  HHERTKHIQLDCH VREKLQE + K +
Sbjct: 1047 LYTDSKPASKIASNPVHHERTKHIQLDCHLVREKLQEEMVKAV 1089


>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1316

 Score =  785 bits (2028), Expect = 0.0
 Identities = 410/797 (51%), Positives = 538/797 (67%), Gaps = 2/797 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQHLL V R+LLFQ+ +P  FW   ++ A  +IN +P P LHN +PFE L+   
Sbjct: 565  GIVERKHQHLLNVTRSLLFQANLPSIFWCFALMHATFLINCIPTPFLHNISPFEKLYGHP 624

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
             D S   +FGCL Y ST+T+ R K   RA  C+F+G+   +KGY L++L +H +L+SR+V
Sbjct: 625  CDISILCVFGCLCYSSTITSHRTKLDPRAHPCIFLGFKPHTKGYLLFNLHTHGLLVSRNV 684

Query: 1672 IFCENIFP-FQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDA 1848
            +F E+ FP F +  S S S   P+               H+  ++               
Sbjct: 685  LFHEDHFPSFTKPHSPSFSSPVPI---------------HYNYVD--------------- 714

Query: 1849 QNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPP 2028
                    +     ++ V  +DP  S  +HS+P P  LRRS+R R  P+YLQ +      
Sbjct: 715  --------YPTFPSSSIVESSDPPTSD-QHSSPPP--LRRSTRPRRPPTYLQDFHGAFT- 762

Query: 2029 SIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDA 2208
            S  + HS+    +G ++P+  FLS D LS     +   IS +TEPK++A+ASK   W  A
Sbjct: 763  STSTAHSS----TGIRHPLHSFLSYDLLSPSFHHYVFSISSVTEPKNFAEASKSDSWLKA 818

Query: 2209 MKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGL 2388
            M  EI ALE N TW++T LP  K  IGC+WVYKVK++++GSI+RYKARLVAKGYTQ EGL
Sbjct: 819  MHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGL 878

Query: 2389 DYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSND 2568
            D+FDTFSPVAK+TTVRLL++LAA   W L QLDVNNAFLHGDL+EEVYM  PPG   S  
Sbjct: 879  DFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFP 938

Query: 2569 KKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDD 2748
             +VC+L +SLYGLKQASRQW+ +L+S L+ +G++ S SD SLF      + T + +YVDD
Sbjct: 939  GQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPATTTAILIYVDD 998

Query: 2749 IILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTET 2928
            I+LAGND+++I  +   L   F IKDLG LKY LG+EVAR+  GIH+CQRKY LDLL++T
Sbjct: 999  IVLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYILDLLSDT 1058

Query: 2929 GFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQYL 3108
            G L SKP +TPMD     S++  +PLTD + YRRL+GR++YLT TRP++++++Q LSQ++
Sbjct: 1059 GMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGRLIYLTNTRPDITYAVQQLSQFV 1118

Query: 3109 SKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAVF 3288
            S PTT H  A  RI RY+K TP  G+F S  S + L+ FSD+DWA C +TRRSI+GFAV+
Sbjct: 1119 SNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRAFSDSDWAGCPDTRRSITGFAVY 1178

Query: 3289 LGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKH-PQSLMYTDSR 3465
            LGDSLISWKSKKQ T+SRSS+EAEYRA+A TTCE+QWL+YLL+D HI     S++Y D++
Sbjct: 1179 LGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPISPSILYCDNQ 1238

Query: 3466 SAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFNY 3645
            SA  I+ N   HERTKHI++DCH VR+K+  GL KL+ + S+QQ ADI TKPL P  F  
Sbjct: 1239 SALQIASNPVFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSQQLADILTKPLSPFVFRS 1298

Query: 3646 LISKLSMLNIHAPLEGG 3696
              SKL MLNIH+ LEGG
Sbjct: 1299 HCSKLGMLNIHSQLEGG 1315


>gb|KYP40677.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 810

 Score =  767 bits (1980), Expect = 0.0
 Identities = 403/793 (50%), Positives = 527/793 (66%), Gaps = 2/793 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQH+L V R+LLFQSKVP SFW   I  A HIINRLP P L+NK+PFE++FN+ 
Sbjct: 62   GIVERKHQHILNVCRSLLFQSKVPKSFWSFAIKHAVHIINRLPTPFLNNKSPFEMIFNQK 121

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            P+    K FGCLAYVSTL+  R+K + RA KC+F+G+  G+KG+ L++L S  +L+SRH 
Sbjct: 122  PNLHDLKTFGCLAYVSTLSGGRNKLEPRAHKCIFLGFKTGTKGFVLFNLHSKSILLSRHA 181

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTT-QIISDA 1848
            IF + +FP+  +     +    + PIS+     D  F  +    + +D +T     I +A
Sbjct: 182  IFHQTVFPYINVFDNQSNSN--IVPISN-----DNIFQPYDFFPSYSDHLTNNPNSIENA 234

Query: 1849 QNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPP 2028
             N+F +       Q+  +  +  +   IE     P   R S R+++ P YL  Y C    
Sbjct: 235  SNNFENH-----TQDPPIEMSQSIP--IETGQIQPITTRVSLRSKSRPGYLDQYHCYNTV 287

Query: 2029 SIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDA 2208
            S  S        S   YP+  ++                        + +AS +  W+ A
Sbjct: 288  SSDST-------SNSLYPMHLYI------------------------FKEASTKDCWKQA 316

Query: 2209 MKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGL 2388
            M AE+ ALE+N+TW +  LP  K  IGCKWVY+ K+++NG++ERYKARLVAKG+TQ EG+
Sbjct: 317  MIAELDALERNRTWSLVTLPPGKKLIGCKWVYRTKHKANGTVERYKARLVAKGFTQTEGI 376

Query: 2389 DYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSND 2568
            DYF+TFSPVAKIT++R L+ALA++  WF+HQLD++NAFLHGDL EEVYM PP G    + 
Sbjct: 377  DYFETFSPVAKITSIRFLLALASSHNWFIHQLDIDNAFLHGDLDEEVYMRPPQGLRLPSS 436

Query: 2569 KKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDD 2748
            K VCKL KSLYGLKQASR W QKLTS L   G+ QS +D SLF      SITIL +YVDD
Sbjct: 437  KLVCKLEKSLYGLKQASRNWNQKLTSELTLMGYKQSFADHSLFVNFTGSSITILLIYVDD 496

Query: 2749 IILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTET 2928
            I+L+GND+++I+ +K HL  KF IKDLG+LK+ LG+EVARS KGI + QRKY L+L+ ET
Sbjct: 497  IVLSGNDMTEIKKVKAHLHNKFHIKDLGSLKFFLGLEVARSKKGILLNQRKYCLELIDET 556

Query: 2929 GFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQYL 3108
            G LG KP+ TP D   +   +    L D + +RRLIGR+LYLT TRP++SFS+Q LSQ++
Sbjct: 557  GLLGCKPAPTPADPAMKLHVDHGDLLHDPTVFRRLIGRLLYLTNTRPDISFSVQQLSQFV 616

Query: 3109 SKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAVF 3288
            SKP   H+ AA RI RY+K  P  GLFYSST+PL ++ FSD+DWA C  TRRS++G+ VF
Sbjct: 617  SKPREPHMQAALRIVRYLKGAPGLGLFYSSTNPLKIQAFSDSDWATCATTRRSVTGYCVF 676

Query: 3289 LGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQSL-MYTDSR 3465
            +G+SLISWKSKKQ T+SRSS+EAEYRA+A  TCE+QWL YL   MHIK P     ++DS+
Sbjct: 677  IGNSLISWKSKKQSTVSRSSSEAEYRALASLTCELQWLKYLCDSMHIKIPTPFATFSDSQ 736

Query: 3466 SAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFNY 3645
            SA  IS+N   HERTKHI++DCH +R K+QEGL  LIH+ S  Q AD FTK L P  F+ 
Sbjct: 737  SAIQISKNPTFHERTKHIEVDCHLIRIKIQEGLLHLIHVLSANQLADAFTKALFPKPFHT 796

Query: 3646 LISKLSMLNIHAP 3684
             ISKL +LNI+ P
Sbjct: 797  AISKLGLLNIYHP 809


>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1002

 Score =  767 bits (1981), Expect = 0.0
 Identities = 409/799 (51%), Positives = 527/799 (65%), Gaps = 4/799 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQH++ VARAL+ QS +P SFW + +  A  +INR P+  L NK P+EI++N +
Sbjct: 246  GIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHAVFLINRQPSSFLENKIPYEIIYNAL 305

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD +  K+FGCLAY +TL   R KF  R  +CVF+G+    KG  LYDL S +  +SRHV
Sbjct: 306  PDLAGIKVFGCLAYATTLHHNRKKFDPRGRRCVFLGFKPQVKGSILYDLNSRETFLSRHV 365

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
             + E+IFPF         P +PL                        D+  T  +     
Sbjct: 366  EYFEHIFPFL--------PTSPL------------------------DLTQTISLPRHQP 393

Query: 1852 NDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPPS 2031
                D      + NTT     P +S +    P PP +R+S+R R  PSYL  Y      +
Sbjct: 394  PLPIDTDPTPLSTNTT-----PTSSPVSVVPP-PPFVRKSTRPRKLPSYLHDYH----HT 443

Query: 2032 IQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDAM 2211
            + + H++ TI S   Y I + +S   LS   KAFS  IS I EP SY +A + + W+ A+
Sbjct: 444  LLTTHNSPTI-SQPLYSIHNHISYSNLSPSQKAFSLSISSIKEPNSYVEAIQDESWKTAI 502

Query: 2212 KAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGLD 2391
            + E+ ALEKN TWI+T LP +K  +GCKWV+K+K+ S+G+IER+KARLVAKGYTQ E LD
Sbjct: 503  QTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFNSDGTIERHKARLVAKGYTQTETLD 562

Query: 2392 YFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSNDK 2571
            Y DTFSPV K+TTVR L+A+A AK W +HQLDVN  FLHGDLHEEVYM PPPG   S  +
Sbjct: 563  YLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTTFLHGDLHEEVYMTPPPGLTVSPHQ 622

Query: 2572 K--VCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVD 2745
               VCKL KSLYGLKQASRQW  KLTS L++ GF QS +D SLFT       T + VYVD
Sbjct: 623  SNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQSMADYSLFTKQFGAKFTAILVYVD 682

Query: 2746 DIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTE 2925
            D++LAGND ++I  IK  LD+KFTIKDLG LKY LG+EVARS+ GI + QRKYALDL+ +
Sbjct: 683  DLVLAGNDPTEINYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKYALDLIED 742

Query: 2926 TGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQY 3105
            TG L SKP  +PMD   +      +PLTD +QYRRL+GR++YLT TR ++SFS+  LSQ+
Sbjct: 743  TGLLASKPCKSPMDHSVKLHKTVGTPLTDPTQYRRLLGRLIYLTNTRADISFSVNHLSQF 802

Query: 3106 LSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAV 3285
            + +PT  H  AA RI +Y+K+ P KGLF+ S+S L LK +SD+DWA C +TRRS++GF+ 
Sbjct: 803  MDQPTDVHYQAALRILKYVKNAPGKGLFFPSSSDLTLKGYSDSDWASCSDTRRSVTGFSF 862

Query: 3286 FLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQD--MHIKHPQSLMYTD 3459
            FLG +LISWKSKKQ T+S+SSAEAEYRA+A +TCE QWL+YLL D  +H  HP  +++ D
Sbjct: 863  FLGPALISWKSKKQATVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHP-IVLFCD 921

Query: 3460 SRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQF 3639
            ++SA  I+ N   HERTK+I+LDCH VREKLQ GL  L+ I +  Q AD+FTK L    F
Sbjct: 922  NQSALHIASNPVFHERTKNIELDCHIVREKLQVGLIHLLPISTADQLADVFTKALSLRPF 981

Query: 3640 NYLISKLSMLNIHAPLEGG 3696
              +I KL M +IH+ L GG
Sbjct: 982  EQIIFKLGMFDIHSSLRGG 1000


>gb|KYP39497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1445

 Score =  778 bits (2010), Expect = 0.0
 Identities = 404/799 (50%), Positives = 528/799 (66%), Gaps = 8/799 (1%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQHLL V RALLFQS++P +FW + I  A HIINRLP   L  K+PFE++++  
Sbjct: 691  GIVERKHQHLLNVCRALLFQSQIPKTFWSYAIKHAVHIINRLPTRFLKQKSPFEMIYHHK 750

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD    ++FGCLAY STL A R K   RASKC+F+GY  G+KGY LY+L S    +SR+V
Sbjct: 751  PDLHDLRVFGCLAYASTLAAGRTKLAPRASKCIFLGYKSGTKGYVLYNLHSRFFSLSRNV 810

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
            IF E +FP+                            S F   ++ +D + T     ++ 
Sbjct: 811  IFHETVFPY----------------------------SDFHKFSSNSDAILT-----EST 837

Query: 1852 NDFADAQ-HGLAAQNTTVVQT------DPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVY 2010
            NDFA  + + +    TT   T       P+   ++     P   R S+R +  P+YL  Y
Sbjct: 838  NDFAHYELYPITVLETTNTHTPSEQLQQPLTEEMQDIPVQP---RVSTRQKFRPNYLNQY 894

Query: 2011 DCKIPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQ 2190
             C         +SA +  S   YP+  +LS +K S+ + AF   IS   EP +YAQA  Q
Sbjct: 895  HC---------YSATSSNSACLYPLHSYLSYNKCSSNYTAFCLSISAHVEPSNYAQAITQ 945

Query: 2191 KEWQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGY 2370
              W+ AM  E+ AL +N+TW +  LP  +  IGCKWVY++KY+++GS++R+KARLVAKG+
Sbjct: 946  DCWKQAMMTELDALNRNRTWSLVSLPPGRKLIGCKWVYRIKYKADGSVDRHKARLVAKGF 1005

Query: 2371 TQEEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPG 2550
            TQ EG+DYF+TFSPVAK+TTVR L+ALA+   WFLHQLDV+NAFLHGDL EEVYM PP G
Sbjct: 1006 TQTEGIDYFETFSPVAKLTTVRFLLALASTNNWFLHQLDVDNAFLHGDLEEEVYMRPPQG 1065

Query: 2551 YLQSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITIL 2730
                + K VCKL KSLYGLKQASR W QKL S LL+ G+ QS +D SLF      SITIL
Sbjct: 1066 LQLPDSKLVCKLEKSLYGLKQASRNWNQKLNSELLHLGYKQSSADHSLFIKKQGSSITIL 1125

Query: 2731 CVYVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYAL 2910
             VYVDD++L+GN+ S+I+ +K HL +KF IKDLG LK+ LG+EVARS KGI + QRKY L
Sbjct: 1126 LVYVDDVVLSGNNFSEIQIVKQHLHQKFQIKDLGPLKFFLGLEVARSKKGIILNQRKYCL 1185

Query: 2911 DLLTETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQ 3090
            +L+ E+G LGSKP+ TP D   +  ++  S L D + +RRLIGR+LYLT TRP++SFS+Q
Sbjct: 1186 ELIDESGLLGSKPAPTPADPAIKLHADHGSLLNDPTSFRRLIGRLLYLTNTRPDISFSVQ 1245

Query: 3091 TLSQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSI 3270
             LSQ++S+P   HL AA RI RY+K  P  GLFY + + L ++ FSD+DWA C  TR+S+
Sbjct: 1246 QLSQFVSQPREPHLQAALRIVRYLKGAPGLGLFYPAENHLRIQAFSDSDWATCSTTRKSV 1305

Query: 3271 SGFAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQSL- 3447
            +G+ VFLG SL+SWKSKKQ T+SRSS+EAEYRA+A  TCE+QWL +L   + +K P    
Sbjct: 1306 TGYCVFLGKSLVSWKSKKQSTVSRSSSEAEYRALASLTCELQWLKFLSDSLFVKIPAPFS 1365

Query: 3448 MYTDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLP 3627
            +++DS+SA  I++N   HERTKHI++DCH +R KLQE L  LIH+PS  Q AD FTK L 
Sbjct: 1366 VFSDSQSAIQIAKNPTFHERTKHIEVDCHLIRIKLQEELLHLIHVPSANQLADAFTKSLY 1425

Query: 3628 PAQFNYLISKLSMLNIHAP 3684
            P  F + ISKL + NIH P
Sbjct: 1426 PKLFLHAISKLGLSNIHGP 1444


>gb|KYP42321.1| Copia protein [Cajanus cajan]
          Length = 1456

 Score =  775 bits (2001), Expect = 0.0
 Identities = 395/801 (49%), Positives = 537/801 (67%), Gaps = 10/801 (1%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQH+L V RALLFQ+K+P  FW   +  A HIINRLP P+L  K+PFE+++N  
Sbjct: 662  GIVERKHQHILNVCRALLFQAKLPKQFWSFAVKQATHIINRLPTPLLSQKSPFEMIYNCK 721

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD +  K+FGCLA+ +TL+++R K   RASKC+F+GY  G+KG+ L++L +   LISR V
Sbjct: 722  PDLTELKVFGCLAFATTLSSKRTKLDRRASKCIFLGYKNGTKGFLLFNLHNKSFLISRDV 781

Query: 1672 IFCENIFPFQ-EIASKSVSPEAPLFPISDLSSA------QDQSFSHFQ-NINAQNDIVTT 1827
            +F E IFP+   + S S S    L  + D  +          +FSH   +I     + ++
Sbjct: 782  LFYEKIFPYSAHVPSMSASDSLLLDVVKDNDTTIYSDPFPTTTFSHGSPSIPLDTPLPSS 841

Query: 1828 TQIISDAQNDFADAQH-GLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQ 2004
               IS  +  F+      +     +  +    N+  + S    P  R S+R R  P YLQ
Sbjct: 842  ETTISTDRPPFSPINTCPIPTATLSTPELPSSNTTNDASQVVMPQTRVSTRIRKPPRYLQ 901

Query: 2005 VYDCKIPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQAS 2184
             Y C+   ++ S  +A   +    YP+  F++ +  S  H +F   IS   EP S+ +A+
Sbjct: 902  EYYCE---NLASSSAASNCL----YPLSSFVTYNNCSPSHTSFCLSISAQHEPTSFKEAN 954

Query: 2185 KQKEWQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAK 2364
             ++ W+ AM+AE++ALEKNQTW +  LP  K  +GCKWVY+VKY+ +GS+ERYKARLVAK
Sbjct: 955  SEECWRRAMEAELQALEKNQTWSLVRLPEGKRPVGCKWVYRVKYKVDGSVERYKARLVAK 1014

Query: 2365 GYTQEEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPP 2544
            G+TQ EG+DYF+TFSPV K++TVR L++LAAA  WFLHQLDV+NAFLHGDL EEVYM PP
Sbjct: 1015 GFTQTEGVDYFETFSPVVKLSTVRFLLSLAAAHNWFLHQLDVDNAFLHGDLFEEVYMKPP 1074

Query: 2545 PGYLQSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSIT 2724
            PG+  S+ + VCKL KSLYGLKQASRQW QKLT  L++  FIQS +D SLF      SIT
Sbjct: 1075 PGFKLSHPRLVCKLHKSLYGLKQASRQWNQKLTEALISLNFIQSSTDHSLFIKKSHSSIT 1134

Query: 2725 ILCVYVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKY 2904
             L VYVDD++L GND+++I A+K +L  +F IKDLG LK+ LG+E+ARS  G+ + QRKY
Sbjct: 1135 ALLVYVDDVVLTGNDMAEISAVKAYLHAQFHIKDLGPLKFFLGLEIARSQSGLILNQRKY 1194

Query: 2905 ALDLLTETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFS 3084
             L+LL+E G    KP +TP+D   +  +++  PL D + +RRLIGR+LYLT TRP++SF+
Sbjct: 1195 CLELLSEHGLTDCKPVSTPIDASVKLYASEGLPLDDPTIFRRLIGRLLYLTNTRPDISFA 1254

Query: 3085 IQTLSQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRR 3264
            +Q LSQ++  P  TH  AA RI RY+KS+P  GLFY S +   ++ FSD+DWA C  TRR
Sbjct: 1255 VQQLSQFVDSPRATHFQAALRILRYLKSSPALGLFYPSQTEHRIQAFSDSDWASCPNTRR 1314

Query: 3265 SISGFAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQS 3444
            S++GF +F G +LISWKSKKQ T+SRSS+EAEYRA+A  TCE+QWL +L  D+ I  P  
Sbjct: 1315 SVTGFCIFYGSALISWKSKKQSTVSRSSSEAEYRALASVTCELQWLLFLCHDLSINIPTP 1374

Query: 3445 L-MYTDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKP 3621
              ++ DS+SA  I++N   HERTKHI++DCH  R K+Q+GL  L H+PS  Q AD+FTK 
Sbjct: 1375 FSIFCDSQSAIYIAKNPTFHERTKHIEVDCHLTRLKIQQGLIHLFHVPSKSQLADVFTKA 1434

Query: 3622 LPPAQFNYLISKLSMLNIHAP 3684
            L P  F   +SKL +++I+ P
Sbjct: 1435 LYPRNFTEAVSKLCLIDIYNP 1455


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  776 bits (2003), Expect = 0.0
 Identities = 402/803 (50%), Positives = 534/803 (66%), Gaps = 9/803 (1%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G+VERKH+HLL VARALLFQS +P  FW   ILTAA++INR P P+L  KTPFE LF+K 
Sbjct: 684  GVVERKHRHLLNVARALLFQSHLPKPFWGDAILTAAYLINRTPTPLLQGKTPFEKLFHKS 743

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            P+YSH ++FGC  +VST   +  KF  R+ + VFIGYP G KGYK+Y L+  K LISR V
Sbjct: 744  PNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLISRDV 803

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQ-NINAQNDIVTTTQIISDA 1848
             F E  FP+Q   S +       FP   L    D    H   N +  N   + T  +   
Sbjct: 804  TFFETEFPYQNXLSTTSPSLDTFFP--SLPQTPDIDDDHISFNHSGSNLQPSATSSVDXH 861

Query: 1849 QNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCK--- 2019
                 D  H  +  +          S    S P+P   RRSSR    P+ LQ +  +   
Sbjct: 862  PQPTLDNSHSSSHVDPPSSPPSLNTSPPVISQPSPSQPRRSSRPTKTPTTLQDFHIEAAL 921

Query: 2020 ----IPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASK 2187
                +PPS  S+ +     SG  + +   LS D+LS  HKAF+ +I+   EP+S++QA  
Sbjct: 922  PSRPVPPSSTSEVAH----SGTIHSLSQVLSYDRLSPMHKAFTVKITLAKEPRSFSQAVL 977

Query: 2188 QKEWQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKG 2367
               W++AM  EI+AL+ N+TW +  LP+ K  IGCKWVYK+KY  +G+IERYKARLVAKG
Sbjct: 978  DSRWREAMNTEIQALQANKTWSLVPLPSHKKPIGCKWVYKIKYNPDGTIERYKARLVAKG 1037

Query: 2368 YTQEEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPP 2547
            ++Q EG+DY +TF+PVAK+TTVR+L++LA+ +GW LHQLDVNNAFL+GDL+E+VYM  PP
Sbjct: 1038 FSQVEGIDYRETFAPVAKLTTVRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPP 1097

Query: 2548 GYLQSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITI 2727
            G+ +  + +VCKL KSLYGLKQASRQWF KL+S L   GF QS SD SLF  +     T 
Sbjct: 1098 GFGRKGEHRVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTT 1157

Query: 2728 LCVYVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYA 2907
            L VYVDD+ILAGN +  I   K  L   F +KD+G L+Y LGIEVARS +GI +CQRKYA
Sbjct: 1158 LLVYVDDVILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYA 1217

Query: 2908 LDLLTETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSI 3087
            L+LL + GFLG+KPS  P++     +  D + L DASQYRRL+GR++YLTITRP+L +++
Sbjct: 1218 LELLEDAGFLGAKPSRFPVEQSLTLTRGDGAELKDASQYRRLVGRLIYLTITRPDLVYAV 1277

Query: 3088 QTLSQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRS 3267
              LSQ++  P   HL AA+++ RY+K TP +G+F  ST  L L  + DADWARC++TRRS
Sbjct: 1278 HILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADWARCKDTRRS 1337

Query: 3268 ISGFAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQSL 3447
             +G+ +F G++ ISWK+KKQ T+SRSSAEAEYR++A T CEI WL  LL D+++ H  ++
Sbjct: 1338 TTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLADLNVNHAHAV 1397

Query: 3448 -MYTDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPL 3624
             ++ D+++A  I+ N   HERTKHI++DCH VREK+Q GL K +HI + +Q AD+FTKPL
Sbjct: 1398 KLFCDNQAAIHIASNPVFHERTKHIEMDCHVVREKVQRGLVKTMHIRTQEQPADLFTKPL 1457

Query: 3625 PPAQFNYLISKLSMLNIHAPLEG 3693
               QF+ L+SKL ++NIH  L G
Sbjct: 1458 SSKQFSTLLSKLGVINIHTNLRG 1480


>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1136

 Score =  754 bits (1946), Expect = 0.0
 Identities = 397/797 (49%), Positives = 528/797 (66%), Gaps = 2/797 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQHLL V R+LLFQ+ +P  FW   +  AA +IN +P P LHN +PFE L+   
Sbjct: 386  GIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIPTPFLHNISPFEKLYGHP 445

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
             D S  ++FGCL Y S +T+ R K   RA  C+F+G+   +KGY L +L +H +L+S++V
Sbjct: 446  CDISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGLLVSQNV 505

Query: 1672 IFCENIFP-FQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDA 1848
            IF E+ FP F +  S S S   P+                                    
Sbjct: 506  IFHEDHFPSFTKPNSPSFSSPVPI------------------------------------ 529

Query: 1849 QNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPP 2028
              ++AD     +  ++++V++       +HS+P P  LRRS+R R  P+YLQ +      
Sbjct: 530  PYNYADYP---SFPSSSIVESSEPPPPDQHSSPPP--LRRSTRPRRPPTYLQDFHGAFTS 584

Query: 2029 SIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDA 2208
            +    HS+    +G ++P+  F+S D+LS     +   IS +T+PK++ +ASK   W  A
Sbjct: 585  T--GPHSS----TGIRHPLHSFISYDRLSPSFHHYVFSISSVTKPKNFVEASKSDSWLKA 638

Query: 2209 MKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGL 2388
            M  EI ALE N TW++T LP  K  IGC+WVYKVK++++GSI+RYKARLVAKGYTQ EGL
Sbjct: 639  MHEEISALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGL 698

Query: 2389 DYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSND 2568
            D+FDTFSPVAK+TTVRLLI+LAA     L QLDVNN+FLHGDL+EEVYM  PPG   S  
Sbjct: 699  DFFDTFSPVAKLTTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFP 758

Query: 2569 KKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDD 2748
             +VC+L +SLYGLKQASRQW+ +L+S L+ +G++ S SD SLF        T + +YVDD
Sbjct: 759  GQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLFLKCSPAITTAILIYVDD 818

Query: 2749 IILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTET 2928
            I+LAGND+++I  +   L   F IKDLG LKY LG+EVAR+  GIH+CQRKY LDLL++T
Sbjct: 819  IVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKYTLDLLSDT 878

Query: 2929 GFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQYL 3108
            G L SKP +TPMD     S++  +P TD + YRRL+GR++YL  TRP +++++Q LSQ++
Sbjct: 879  GMLASKPVSTPMDYSTHLSASSGTPFTDTAAYRRLVGRLIYLPNTRPAIAYAVQQLSQFV 938

Query: 3109 SKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAVF 3288
            S P T H  A  RI  Y+K TP  G+F S  S + L+ FSD DWA C +TRRSI+GFAV+
Sbjct: 939  SNPPTAHRQALFRILCYLKGTPGSGIFLSVNSSVQLRAFSDYDWAGCPDTRRSITGFAVY 998

Query: 3289 LGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQ-SLMYTDSR 3465
            LGDSLISWKSKKQ T+SRSS+EAEYRA+A TTCE+QWL+YLL+D HI   + S++Y D++
Sbjct: 999  LGDSLISWKSKKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDNQ 1058

Query: 3466 SAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFNY 3645
             A  I+ N   HERTKHI++DCH VR+K+  GL KL+ + S+ Q ADI TKPL P  F+ 
Sbjct: 1059 FALQIASNPIFHERTKHIEIDCHIVRDKVSTGLLKLLPVSSSLQLADILTKPLSPFVFHS 1118

Query: 3646 LISKLSMLNIHAPLEGG 3696
              SKL MLNIH+ LEGG
Sbjct: 1119 HYSKLGMLNIHSQLEGG 1135


>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1427

 Score =  761 bits (1964), Expect = 0.0
 Identities = 398/801 (49%), Positives = 530/801 (66%), Gaps = 4/801 (0%)
 Frame = +1

Query: 1315 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 1494
            +VERKH+H+L + R LLF S VP SFW + +  A H+INRLP+P+L+N +P+++L++K P
Sbjct: 645  VVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLPSPVLNNSSPYQMLYDKPP 704

Query: 1495 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHVI 1674
                 K+FG L Y STL   R K   +A+K V++G   G+KG+ + DL +  + +SR+V+
Sbjct: 705  TLLDLKVFGSLCYASTLVQGRSKLAPKATKGVYLGVKQGTKGFLVLDLLTRSIFVSRNVV 764

Query: 1675 FCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQN 1854
            F E+IFPF E  S  ++           S  Q+ +   F  +++ +  VTT    S    
Sbjct: 765  FYEHIFPFFEKGSTVITN----------SQQQNDACFDFLYLDSSSHPVTTIDNSSLLDI 814

Query: 1855 DFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKI---P 2025
            D A  ++ L          D   S       +P  LR+S+R++ +P+YL+ Y C +    
Sbjct: 815  DSAHYENDL---------NDIDESAHPSETSSPSQLRKSTRHKCSPAYLKDYHCNLLIGV 865

Query: 2026 PSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQD 2205
            P  + +H         +YP+   LS D LS  +  +   I+   EP ++ QA K K W +
Sbjct: 866  PPPEDKHI--------RYPLNTVLSYDSLSASYSRYVLSITTHVEPHTFNQAVKNKVWVE 917

Query: 2206 AMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEG 2385
            AM+AE+ ALE N+TW +  LP  K  IG KWVYK+KY+S+GSIERYKARLV KGYTQ +G
Sbjct: 918  AMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDGSIERYKARLVVKGYTQIQG 977

Query: 2386 LDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSN 2565
            LDYFDTF+PVAK++TVR+L+A+A+ + W LHQLD+NNAFLHGDL E+VYM  P G     
Sbjct: 978  LDYFDTFAPVAKLSTVRMLLAIASCQHWELHQLDINNAFLHGDLLEDVYMEIPQGLNIDK 1037

Query: 2566 DKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVD 2745
               VCKL KSLYGLKQASRQWF KL+S LL+  + QS+ D SLFT  H    T++ +YVD
Sbjct: 1038 PNHVCKLNKSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDHSLFTKHHGTHFTVILIYVD 1097

Query: 2746 DIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTE 2925
            D+I+AG D  +I  IK  LD KF IKDLG L+Y LG+E+ARS  GI + QRKY LDLL E
Sbjct: 1098 DLIIAGTDSEEINHIKQSLDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKYTLDLLDE 1157

Query: 2926 TGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQY 3105
            T FL  KP  TP+    + S    SP  D + YRRLIG++LYL  TRP++S+S+Q LSQ+
Sbjct: 1158 TSFLAGKPVLTPIIKGTRLSHTTDSPYEDPAGYRRLIGKLLYLITTRPDISYSVQQLSQF 1217

Query: 3106 LSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAV 3285
            LS P  +H  AA R+ RY+K  P +GLFY + SPL LK FSD+DWA C +TRRS+SG+++
Sbjct: 1218 LSCPQQSHYQAAIRVLRYLKGNPGQGLFYPADSPLQLKAFSDSDWASCPDTRRSLSGYSI 1277

Query: 3286 FLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKH-PQSLMYTDS 3462
            FLG+SLISWK KKQ TISRSS+EAEYRA+A T CEIQWLTYLLQD  +     +L+Y D+
Sbjct: 1278 FLGNSLISWKCKKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDN 1337

Query: 3463 RSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFN 3642
            +SA  I+ N+  HERTKHI++DCH VREKLQ GLF L+ I S+ Q ADI TKPL P+ F 
Sbjct: 1338 QSARHIASNAVFHERTKHIEIDCHLVREKLQAGLFHLLPIASSHQLADILTKPLDPSPFQ 1397

Query: 3643 YLISKLSMLNIHAPLEGGCKD 3705
            YL+SKL ++NI++P   G  D
Sbjct: 1398 YLLSKLGVINIYSPACRGVLD 1418


>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1353

 Score =  754 bits (1946), Expect = 0.0
 Identities = 386/794 (48%), Positives = 529/794 (66%), Gaps = 3/794 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G+VERKHQH+L +ARAL+FQS V   FW++ I  A H+INRLP   L   +P+ +L+++ 
Sbjct: 578  GVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEK 637

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD+SH K+FGCLA+ STL+  R K + R+ KC+F+GY  G+KG+ +YDL++ +  ISR V
Sbjct: 638  PDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDV 697

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
             F ENIFP Q+  S   S + P+ PI                  AQ  + +   I S   
Sbjct: 698  QFYENIFPLQKDFSIQ-STDGPVVPI------------------AQMPLTSCDPIPSHTH 738

Query: 1852 NDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSS-RNRTNPSYLQVYDCKIPP 2028
            ++  + +H     ++T+  T+  NS   +   N P +RR+S R +  P YLQ Y C +  
Sbjct: 739  DNLDETEH--EHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHCTLAA 796

Query: 2029 SIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDA 2208
            S   Q S     S  +YPI D+L     S   ++F + IS I EP+SY  A     W++A
Sbjct: 797  SKVDQSS-----STARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAINHDCWKEA 851

Query: 2209 MKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGL 2388
            ++AE+ AL+K +TWI+TDLP +K  +GC+WV+KVKY ++GS+ERYKARLVAKG+TQ  GL
Sbjct: 852  IRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQIPGL 911

Query: 2389 DYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSND 2568
            DY DTFSPV ++TT+R+ +A+AAA  W +HQLD+N AFLHGDL EEVYM PPPG + S+ 
Sbjct: 912  DYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPPGLILSSP 971

Query: 2569 KKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDD 2748
             KVCKL KSLYGLKQ SRQW  KLT  L  +GF+QSKSD SLFT   +     + VYVDD
Sbjct: 972  NKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDD 1031

Query: 2749 IILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTET 2928
            +I++G+D ++I  +K  LD++F+IKDLG L Y LG+E +RS +GI +CQRKYAL+LL +T
Sbjct: 1032 LIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYALELLQDT 1091

Query: 2929 GFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQYL 3108
            G L SKP +TPMD   +   +     +D S YRRL+GR++YLT TRP+L+F++  LSQ++
Sbjct: 1092 GLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFM 1151

Query: 3109 SKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAVF 3288
             +P   H  AA ++ RY+K+TP KGLF+ S+S L L  ++D+DWA C ++RRSISGF  F
Sbjct: 1152 HQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFF 1211

Query: 3289 LGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKH--PQSLMYTDS 3462
            LG++L+SWKSKKQ  +SRSS+EAEYRA+AL  CE QWL  LL D  ++   P SL + D+
Sbjct: 1212 LGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISL-FCDN 1270

Query: 3463 RSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFN 3642
            +SA  I+ N   HERTKH+++DCH VR+++Q G   L  I S+ Q ADI TKPL P  F 
Sbjct: 1271 QSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPLLPKMFQ 1330

Query: 3643 YLISKLSMLNIHAP 3684
              + KL + N   P
Sbjct: 1331 DFVCKLGLSNFTTP 1344


>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1423

 Score =  755 bits (1950), Expect = 0.0
 Identities = 387/794 (48%), Positives = 530/794 (66%), Gaps = 3/794 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G+VERKHQH+L +ARAL+FQS V   FW++ I  A H+INRLP   L   +P+ +L+++ 
Sbjct: 648  GVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAVHLINRLPTRFLQQNSPYYVLYSEK 707

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD+SH K+FGCLA+ STL+  R K + R+ KC+F+GY  G+KG+ +YDL++ +  ISR V
Sbjct: 708  PDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLGYSSGTKGFIMYDLKTRETFISRDV 767

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
             F ENIFP Q+  S   S + P+ PI                  AQ  + +   I S   
Sbjct: 768  QFYENIFPLQKDFSIQ-STDGPVVPI------------------AQMPLTSCDPIPSHTH 808

Query: 1852 NDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSS-RNRTNPSYLQVYDCKIPP 2028
            ++  + +H     ++T+  T+  NS   +   N P +RR+S R +  P YLQ Y C +  
Sbjct: 809  DNLDETEH--EHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPGYLQDYHCTLAA 866

Query: 2029 SIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDA 2208
            S   Q S     S  +YPI D+L     S   ++F + IS I EP+SY  A     W++A
Sbjct: 867  SKVDQSS-----STARYPISDYLPYTSYSAVQQSFVSTISSIIEPRSYQDAINHDCWKEA 921

Query: 2209 MKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGL 2388
            ++AE+ AL+K +TWI+TDLP +K  +GC+WV+KVKY ++GS+ERYKARLVAKG+TQ  GL
Sbjct: 922  IRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGSVERYKARLVAKGFTQIPGL 981

Query: 2389 DYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSND 2568
            DY DTFSPV ++TT+R+ +A+AAA  W +HQLD+N AFLHGDL EEVYM PPPG + S+ 
Sbjct: 982  DYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHGDLVEEVYMKPPPGLILSSP 1041

Query: 2569 KKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDD 2748
             KVCKL KSLYGLKQASRQW  KLT  L  +GF+QSKSD SLFT   +     + VYVDD
Sbjct: 1042 NKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSDYSLFTKRTNIGFIAILVYVDD 1101

Query: 2749 IILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTET 2928
            +I++G+D ++I  +K  LD++F+IKDLG L Y LG+E +RS +GI +CQRKYAL+LL +T
Sbjct: 1102 LIISGSDETEIMKVKRLLDKQFSIKDLGQLSYFLGLEFSRSDQGISVCQRKYALELLQDT 1161

Query: 2929 GFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQYL 3108
            G L SKP +TPMD   +   +     +D S YRRL+GR++YLT TRP+L+F++  LSQ++
Sbjct: 1162 GLLASKPCSTPMDHTTRLHHDPLDLYSDPSSYRRLVGRLIYLTHTRPDLAFAVGKLSQFM 1221

Query: 3109 SKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAVF 3288
             +P   H  AA ++ RY+K+TP KGLF+ S+S L L  ++D+DWA C ++RRSISGF  F
Sbjct: 1222 HQPNNAHFQAARKVLRYVKATPTKGLFFPSSSDLKLTGYTDSDWATCPDSRRSISGFCFF 1281

Query: 3289 LGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKH--PQSLMYTDS 3462
            LG++L+SWKSKKQ  +SRSS+EAEYRA+AL  CE QWL  LL D  ++   P SL + D+
Sbjct: 1282 LGNALVSWKSKKQNVVSRSSSEAEYRALALGVCEAQWLHKLLTDFQLQDLIPISL-FCDN 1340

Query: 3463 RSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFN 3642
            +SA  I+ N   HERTKH+++DCH VR+++Q G   L  I S+ Q ADI TKPL P  F 
Sbjct: 1341 QSALYIAANPVFHERTKHVEIDCHTVRDQVQAGFIHLAPITSSGQLADILTKPLLPKMFQ 1400

Query: 3643 YLISKLSMLNIHAP 3684
              + KL + N   P
Sbjct: 1401 DFVCKLGLSNFTTP 1414


>gb|KHN01991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1311

 Score =  742 bits (1915), Expect = 0.0
 Identities = 392/787 (49%), Positives = 520/787 (66%), Gaps = 4/787 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GI ERKHQHLL V RALLFQ+ +P +FW + +L A +++N +P P LHN +P+E L   +
Sbjct: 556  GIAERKHQHLLNVTRALLFQANLPSNFWCYALLHATYLVNCIPTPFLHNVSPYEKLHGHL 615

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            P+ SH ++FGCL Y STL A R K   RA  C+FIG+   +KGY +Y+L  H ++ SR+V
Sbjct: 616  PEISHLRVFGCLCYASTLKANRKKLDPRAHPCIFIGFKASTKGYLVYNLHLHSIITSRNV 675

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTT-QIISDA 1848
            +F E+ F  Q   ++S  PE+        S+   +SF    NI+  + I+    Q +   
Sbjct: 676  VFYEDHFS-QIPETQSSHPES--------STILPKSF----NISPHDPIIEKPPQPVIQE 722

Query: 1849 QNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPP 2028
              D    Q         +  TD   S       + P  RRS+R +  P+YLQ Y   +  
Sbjct: 723  TTDHTPLQ---------LTSTD--ESAFSQRTKHEP--RRSTRPKHAPTYLQDYHHSL-- 767

Query: 2029 SIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDA 2208
               S H  +   S + YP+   LS  +LS+ HK F   IS   EP SYA+AS+   W  A
Sbjct: 768  ---SSHDTKVSTSSR-YPLSSVLSYSRLSHTHKHFVMSISSTVEPSSYAEASQYDCWIKA 823

Query: 2209 MKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGL 2388
            M+AE++AL+ N TW +T LP  K  IGC+WVYK+K+R++GSIERYKARLVAKGYTQ EGL
Sbjct: 824  MEAELQALQSNNTWKLTLLPPHKTAIGCRWVYKIKHRADGSIERYKARLVAKGYTQMEGL 883

Query: 2389 DYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSND 2568
            DY   FSPVAK+T VRLL+A+ A   W L QLDVNNAFLHG+L EEVYM  PPG    N 
Sbjct: 884  DYLYAFSPVAKLTIVRLLLAMVAFNQWHLRQLDVNNAFLHGELDEEVYMQVPPGLSVPNS 943

Query: 2569 KKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDD 2748
            + VC+L +SLY LKQASRQWF KL+  L++ GF +S SD SLF       IT L VYVDD
Sbjct: 944  QMVCRLQRSLYELKQASRQWFTKLSGLLISLGFEKSHSDHSLFLRFTGSIITALLVYVDD 1003

Query: 2749 IILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTET 2928
            IIL GN  S+I+ +   LD+ F IKDLG LKY LG+E+ARS+ GIH+CQRKY LD+L+++
Sbjct: 1004 IILTGNSESEIQDVIKLLDQAFKIKDLGNLKYFLGMEIARSSSGIHLCQRKYTLDILSDS 1063

Query: 2929 GFLGSKPSTTPMDCKAQFSSNDSSPLTD--ASQYRRLIGRMLYLTITRPELSFSIQTLSQ 3102
            G LG +P+ TPMD   +  +   +PL+   +S YRRLIGR++YLT TRP++++++Q LSQ
Sbjct: 1064 GMLGCQPNVTPMDYSTKLQATAGTPLSTEASSSYRRLIGRLIYLTNTRPDITYAVQQLSQ 1123

Query: 3103 YLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFA 3282
            Y+S PT+ H  AA+RI RY+K T   G+F S+T    L+ FSD+DWA CQ++R+S +GF 
Sbjct: 1124 YMSNPTSVHQQAAYRILRYLKGTSGSGIFLSATGTPQLRAFSDSDWAGCQDSRKSTTGFV 1183

Query: 3283 VFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDM-HIKHPQSLMYTD 3459
            ++LG S +SW+SKKQ T+SRSS+EAEYRA+A TTCE+QWLTYLLQD  H     + +Y D
Sbjct: 1184 IYLGSSPVSWQSKKQSTVSRSSSEAEYRAMATTTCELQWLTYLLQDFRHNFTKPATIYCD 1243

Query: 3460 SRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQF 3639
            ++SA  I+ N   HERTKHI++DCH VR+K+  GL KL+ +PS+ Q ADIFTK LPP  F
Sbjct: 1244 NQSAIQIATNPVFHERTKHIEIDCHIVRQKVTSGLLKLLPVPSSLQLADIFTKALPPTVF 1303

Query: 3640 NYLISKL 3660
              L +KL
Sbjct: 1304 QNLCNKL 1310


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  746 bits (1927), Expect = 0.0
 Identities = 385/802 (48%), Positives = 533/802 (66%), Gaps = 19/802 (2%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G+VERKH+H+L VAR+L+FQS VPL FW  C+LTA ++INR+P P+L NK+PFE+L+N+ 
Sbjct: 924  GVVERKHRHILNVARSLMFQSNVPLEFWGECVLTAVYLINRIPTPLLSNKSPFEVLYNRP 983

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            P  +H ++FGC  YV+ +  ++ KF  RAS CVF+GYP G KGYK+ DL++ K+ +SR V
Sbjct: 984  PSLTHLRVFGCECYVTNVHPKQ-KFDPRASICVFLGYPHGKKGYKVLDLQTQKISVSRDV 1042

Query: 1672 IFCENIFPFQEIASKSV--SPEAPL-FPISDLSSAQDQSFSHFQN-----INAQNDIVTT 1827
             F ENIFPF   +S+S   SP  PL  PIS  S+ Q  S   F       ++  N + + 
Sbjct: 1043 FFRENIFPFHSSSSQSQQHSPSLPLPLPISFDSTPQPISLPRFSPSSTPPLSHHNPVSSP 1102

Query: 1828 TQIISDAQNDFA--DAQHGLAAQNTTVVQTDPVNSHIEHSN---PNP---PILRRSSRNR 1983
                +D     +       L +  +    + P +  +  SN   P+P   P LRRS+R+ 
Sbjct: 1103 PSSNTDVPEPLSHESVASPLPSSPSPSSLSSPPSVPLVPSNTSAPSPTHEPPLRRSTRHI 1162

Query: 1984 TNPSYLQVYDCKIPPSIQSQHSAQTIIS--GKQYPIQDFLSVDKLSNKHKAFSAQISQIT 2157
              P++   Y      S Q  HS+    S  G +YP+   LS  + S  H+AF A ++  T
Sbjct: 1163 QPPAWHHDYVM----SAQLNHSSTQSSSRQGTRYPLSSHLSFFRFSPHHRAFLALLTAQT 1218

Query: 2158 EPKSYAQASKQKEWQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIE 2337
            EP S+ QA     W+ AM  E++ALE+N TW M  LP     IGC+WVYK+KY S+G+IE
Sbjct: 1219 EPSSFEQADCDPRWRQAMSTELQALERNNTWEMVPLPPGHKPIGCRWVYKIKYHSDGTIE 1278

Query: 2338 RYKARLVAKGYTQEEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDL 2517
            RYKARLVAKGYTQ  G+DY +TFSP AK+TT+R L+ +AA++ W++HQLDV+NAFLHG+L
Sbjct: 1279 RYKARLVAKGYTQVAGIDYQETFSPTAKLTTLRCLLTVAASRNWYIHQLDVHNAFLHGNL 1338

Query: 2518 HEEVYMLPPPGYLQSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLF 2697
             EEVYM PPPG  +  +  VC+L KS+YGLKQASR WF   T+ + + G+IQSK+D SLF
Sbjct: 1339 QEEVYMTPPPGLRRQGENLVCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQSKADYSLF 1398

Query: 2698 TMSHDDSITILCVYVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTK 2877
            T S  +  T + +YVDDI+L GND+ +I+ +K HL ++F IKDLG LKY LGIE +RS K
Sbjct: 1399 TKSQGNKFTAILIYVDDILLTGNDLHEIKMLKTHLLKRFFIKDLGELKYFLGIEFSRSKK 1458

Query: 2878 GIHICQRKYALDLLTETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLT 3057
            GI + QRKY LD+L +TG  G KP   PM+   + ++ D   L D S+YRRL+GR++YLT
Sbjct: 1459 GIFMSQRKYTLDILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLIYLT 1518

Query: 3058 ITRPELSFSIQTLSQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDAD 3237
            +TRP++ +S++TLSQ+++ P   H  AA R+ RYIK +P +GLF  S + L L  F D+D
Sbjct: 1519 VTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSD 1578

Query: 3238 WARCQETRRSISGFAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQ 3417
            W  C+ +RRS+SG+ VFLG SLISWKSKKQ  +SRSSAEAEYRA+A T  E+ WL Y+L+
Sbjct: 1579 WGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILK 1638

Query: 3418 DMHIK-HPQSLMYTDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQ 3594
            D+ ++    + ++ D+++A  I+ N   HERTKHI++DCH VREKLQ G+ +  ++ +  
Sbjct: 1639 DLKVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKM 1698

Query: 3595 QTADIFTKPLPPAQFNYLISKL 3660
            Q AD+FTK L   QF +L +KL
Sbjct: 1699 QLADVFTKALGREQFEFLCTKL 1720


>gb|KYP64985.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1394

 Score =  733 bits (1893), Expect = 0.0
 Identities = 386/796 (48%), Positives = 516/796 (64%), Gaps = 5/796 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            GIVERKHQH+L VARALLFQS +   FW + I  A H+INRLP P L NK+P+E +F K+
Sbjct: 624  GIVERKHQHILNVARALLFQSGLSSVFWSYAIKHAVHLINRLPTPFLENKSPYESVFGKI 683

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD S  ++FGCLA+ +T+T+   K   RASKC+F+G+  G KGY L++L +   L+SR+V
Sbjct: 684  PDLSTLRVFGCLAFANTITSGITKLDKRASKCIFLGFKPGVKGYLLFNLTTKSFLLSRNV 743

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
            IF E+ FP+    S SVS        +  ++A  QSF          D +    IIS   
Sbjct: 744  IFYESHFPYAS-NSPSVSNNH-----TTGTTASQQSF----------DSLIAFDIISAIP 787

Query: 1852 NDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPIL----RRSSRNRTNPSYLQVYDCK 2019
            N+       + + N      +PV    + SN    I+    R S+R R  P+YL  YDC 
Sbjct: 788  NNVTS---DIVSSNIDHNAVEPVLQFNDDSNDAVQIVDQPTRISTRPRKPPAYLSDYDC- 843

Query: 2020 IPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEW 2199
              P++ S +++        YP+  +LS    S+ H AF   +S   EP S+ +A K   W
Sbjct: 844  --PTLSSANTSCCT----PYPLHSYLSYSNCSDSHTAFCMSLSATIEPTSFKEACKHDHW 897

Query: 2200 QDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQE 2379
            Q AM AEI+ALE+N+TW +  LP  K  +GCKWVYK K  ++GSIER+KARLVAKG+TQ 
Sbjct: 898  QQAMLAEIQALERNKTWSLVRLPPKKRVVGCKWVYKTKLNADGSIERHKARLVAKGFTQT 957

Query: 2380 EGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQ 2559
            EG+D+F+TFSPV K+TTVR L+++A +  WFLHQLDV+NAFLHGDL  EVYM PPPG + 
Sbjct: 958  EGMDFFETFSPVVKLTTVRFLLSVAVSHNWFLHQLDVDNAFLHGDLDVEVYMKPPPGLIL 1017

Query: 2560 SNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVY 2739
                 VCKL KSLYGL+QASRQ   KLTS L++YGF QS +D SLF      S T L VY
Sbjct: 1018 PEPHLVCKLHKSLYGLRQASRQGNSKLTSALISYGFSQSPADHSLFIRHSSTSFTALLVY 1077

Query: 2740 VDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLL 2919
            VDDI+L G+ I  I A+K  L  +F IKDLG LK  LG +VARS +G+ + QRKY LD+L
Sbjct: 1078 VDDIVLTGDSIQDIVAVKKFLHHEFRIKDLGNLKLFLGFDVARSQQGLILNQRKYCLDIL 1137

Query: 2920 TETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLS 3099
             E GF G KP+ +P +   +   ++   + D + YRRLIG++ YLT TRP++SF++Q +S
Sbjct: 1138 AEFGFTGCKPANSPSNPTVKLKDDEGDLVQDPTAYRRLIGKLQYLTNTRPDISFAVQQVS 1197

Query: 3100 QYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGF 3279
            Q++SKP  +HL AA RI +Y+K  P  GLFY S +P  ++ FSD+DWA C  TR+S +G+
Sbjct: 1198 QFMSKPRYSHLNAAFRILKYLKGCPGLGLFYPSANPHRIQAFSDSDWATCCITRKSTTGY 1257

Query: 3280 AVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQSL-MYT 3456
             VF G+ LISWKSKKQ T+SRSS EAEYRA+A   CE+QWL Y+  D+ ++ P     + 
Sbjct: 1258 CVFYGNCLISWKSKKQSTVSRSSTEAEYRALASVACELQWLKYVADDLCLQIPLPFPTFC 1317

Query: 3457 DSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQ 3636
            D++SA  +++N   HERTKHI++DCH +R K+ +GL  L H+PS  Q AD+FTK L P  
Sbjct: 1318 DNQSAIQLAKNPSFHERTKHIEVDCHLIRAKILDGLIVLSHVPSKHQLADMFTKSLYPGP 1377

Query: 3637 FNYLISKLSMLNIHAP 3684
            FN  +SK+ +LNIH P
Sbjct: 1378 FNVNLSKMGLLNIHHP 1393


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  728 bits (1879), Expect = 0.0
 Identities = 375/794 (47%), Positives = 512/794 (64%), Gaps = 7/794 (0%)
 Frame = +1

Query: 1315 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 1494
            +VERKHQH+L VAR+L FQS +P+S+W  CILTA ++INRLPAPIL +K PFE+L   +P
Sbjct: 563  VVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVP 622

Query: 1495 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHVI 1674
             Y H K+FGCL Y ST    RHKF  RA  C FIGYP G KGYKL DLE+H +++SRHV+
Sbjct: 623  TYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVV 682

Query: 1675 FCENIFPFQEIASKSVSPEAPLFP-ISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQ 1851
            F E +FPF  + S     E   FP ++     Q QS  H       +D  ++ +I+  A 
Sbjct: 683  FHEELFPF--LGSDLSQEEQNFFPDLNPTPPMQRQSSDHVN----PSDSSSSVEILPSA- 735

Query: 1852 NDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPPS 2031
                                +P N      N   P ++ S R    P+YLQ Y C     
Sbjct: 736  --------------------NPTN------NVPEPSVQTSHRKAKKPAYLQDYYC----- 764

Query: 2032 IQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDAM 2211
                    +++S   + I+ FLS D++++ +  F A + +  EP +Y +A K + W+DAM
Sbjct: 765  -------HSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAM 817

Query: 2212 KAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGLD 2391
             AE   LE   TW +  LPADK CIGC+W++K+KY S+GS+ERYKARLVA+GYTQ+EG+D
Sbjct: 818  GAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGID 877

Query: 2392 YFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSNDK 2571
            Y +TFSPVAK+ +V+LL+ +AA     L QLD++NAFL+GDL EE+YM  P GY      
Sbjct: 878  YNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGD 937

Query: 2572 K-----VCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCV 2736
                  VC+L KSLYGLKQASRQW+ K +S LL  GFIQS  D + F    D     + V
Sbjct: 938  SLPPNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLV 997

Query: 2737 YVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDL 2916
            Y+DDII+A N+ + ++ +K  +   F ++DLG LKY LG+E+ RS KGIHI QRKYALDL
Sbjct: 998  YIDDIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDL 1057

Query: 2917 LTETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTL 3096
            L ETG LG KPS+ PMD    F+ +      +   YRRLIGR++YL ITRP+++F++  L
Sbjct: 1058 LDETGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKL 1117

Query: 3097 SQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISG 3276
            +Q+   P   HL A ++I +YIK T  +GLFYS+TS L LK +++AD+  C+++RRS SG
Sbjct: 1118 AQFSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSG 1177

Query: 3277 FAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIK-HPQSLMY 3453
            + +FLGDSLI WKS+KQ  +S+SSAEAEYR++++ T E+ WLT  L+++ +     +L++
Sbjct: 1178 YCMFLGDSLICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLF 1237

Query: 3454 TDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPA 3633
             D+ +A  I+ N   HERTKHI+ DCH VRE+L +GLF+L HI +  Q AD FTKPL P+
Sbjct: 1238 CDNEAAIHIANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPS 1297

Query: 3634 QFNYLISKLSMLNI 3675
             F+ LISK+ +LNI
Sbjct: 1298 HFHRLISKMGLLNI 1311


>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1454

 Score =  728 bits (1878), Expect = 0.0
 Identities = 375/792 (47%), Positives = 510/792 (64%), Gaps = 5/792 (0%)
 Frame = +1

Query: 1315 IVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKMP 1494
            +VERKHQH+L VARAL+FQS+VPLS W  C+LTA  +INR P+ +L NKTP+EIL    P
Sbjct: 714  VVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAP 773

Query: 1495 DYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHVI 1674
             Y   + FGCL Y ST   QRHKFQ R+  C+F+GYP G KGYKL DLES+ V ISR+V 
Sbjct: 774  VYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQ 833

Query: 1675 FCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQN 1854
            F E +FP  +                              N  +++ +   T ++  +  
Sbjct: 834  FHEEVFPLAK------------------------------NPGSESSLKLFTPMVPVSSG 863

Query: 1855 DFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPPSI 2034
              +D  H  ++  + +    P  S              S R R  P++L  Y C    ++
Sbjct: 864  IISDTTHSPSSLPSQISDLPPQIS--------------SQRVRKPPAHLNDYHCN---TM 906

Query: 2035 QSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDAMK 2214
            QS H         +YPI   +S  K+S  H  +   I++I  P +YA+A   KEW +A+ 
Sbjct: 907  QSDH---------KYPISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVD 957

Query: 2215 AEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGLDY 2394
            AEI A+EK  TW +T LP  K  +GCKWV+ +K+ ++G++ERYKARLVAKGYTQ+EGLDY
Sbjct: 958  AEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDY 1017

Query: 2395 FDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSN--- 2565
             DTFSPVAK+TT++LL+ ++A+K WFL QLDV+NAFL+G+L EE++M  P GY +     
Sbjct: 1018 TDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIV 1077

Query: 2566 --DKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVY 2739
                 V +L +S+YGLKQASRQWF+K +S LL+ GF ++  D +LF   +D    I+ VY
Sbjct: 1078 LPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVY 1137

Query: 2740 VDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLL 2919
            VDDI++A    +    +   LD++F ++DLG LKY LG+EVAR+T GI ICQRKYAL+LL
Sbjct: 1138 VDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELL 1197

Query: 2920 TETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLS 3099
              TG L  KP + PM    +   +D   + D  QYRR++G+++YLTITRP+++F++  L 
Sbjct: 1198 QSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLC 1257

Query: 3100 QYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGF 3279
            Q+ S P TTHL AA+R+ +YIK T  +GLFYS++S L LK F+D+DWA CQ++RRS + F
Sbjct: 1258 QFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSF 1317

Query: 3280 AVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQSLMYTD 3459
             +F+GDSLISW+SKKQ T+SRSSAEAEYRA+AL TCE+ WL  LL  +    P  ++Y+D
Sbjct: 1318 TMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPILYSD 1377

Query: 3460 SRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQF 3639
            S +A  I+ N   HERTKHI+LDCH VRE+L  G  KL+H+ +  Q ADI TKPL P QF
Sbjct: 1378 STAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPLFPYQF 1437

Query: 3640 NYLISKLSMLNI 3675
             +L SK+S+LNI
Sbjct: 1438 EHLKSKMSILNI 1449


>gb|KHN05285.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1346

 Score =  722 bits (1864), Expect = 0.0
 Identities = 378/776 (48%), Positives = 508/776 (65%), Gaps = 5/776 (0%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G VERKHQ +L + RALL QS +P SFW + +  A +I+NR+PAP L NK+P+ +L+N  
Sbjct: 589  GRVERKHQQILNIGRALLVQSNLPKSFWCYAVSHAVYIMNRVPAPNLQNKSPYTLLYNTA 648

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            PD+   K+FG L + STL + R K   RA KCVF+GY  G KG  L DL ++ + +SR V
Sbjct: 649  PDFDTLKVFGSLVFASTLQSHRTKLDLRARKCVFLGYKSGVKGVVLLDLLNNSIFLSRDV 708

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPI---SDLSSAQDQSFSHFQNINA-QNDIVTTTQII 1839
               E+IFP+Q  + K+      + P    SD++   D S     +INA Q+     + + 
Sbjct: 709  THHEHIFPYQSSSPKTPWEYHSISPTPNDSDITLDSDISL----DINAEQSPSPPHSSLS 764

Query: 1840 SDAQNDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCK 2019
             +  ND           + T   T P   H    N +P +  +  R R  P +L  Y C 
Sbjct: 765  PNISND--------TVISDTSTSTPPPKDH----NDSPLLHSKPIRQRRAPLHLSDYVCH 812

Query: 2020 IPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEW 2199
               +  + H + T  +  +YP+  F S+  LS  HKAFS  I+  TEP+SY +ASK + W
Sbjct: 813  --NTSPTSHESLTSGTKSKYPLSSFHSLTLLSPSHKAFSMSITHCTEPQSYEEASKHEHW 870

Query: 2200 QDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQE 2379
              AMK E+ AL KN TW + +LP     IGCKWVYKVK+++NG IERYKARLVAKGY Q 
Sbjct: 871  VTAMKEELNALAKNCTWKIVELPPHTKPIGCKWVYKVKHKANGQIERYKARLVAKGYNQV 930

Query: 2380 EGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQ 2559
            EG+DYF+TFSPVAKITTVR L+A+AA K W LHQLDVNNAFLHGDL E+VYM  P G   
Sbjct: 931  EGIDYFETFSPVAKITTVRTLLAVAAIKNWHLHQLDVNNAFLHGDLQEDVYMKIPDGVTC 990

Query: 2560 SNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVY 2739
            +    VCKL KSLYGLKQASR+W++KLT+ LL  G+IQS SD SLFT++  ++ T L VY
Sbjct: 991  AKPNSVCKLQKSLYGLKQASRKWYEKLTNLLLKEGYIQSISDYSLFTLTKGNTFTALLVY 1050

Query: 2740 VDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLL 2919
            VDDIILAG+ I + + IK  LD  F IK+LG LKY LG+EVA S  GI I QRKY LDLL
Sbjct: 1051 VDDIILAGDSIDEFDRIKNVLDLAFKIKNLGKLKYFLGLEVAHSRLGITISQRKYCLDLL 1110

Query: 2920 TETGFLGSKPSTTPMDCKAQFSSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLS 3099
             ++G LG KP++TP+D   +  S   +P  D S YRR++G++LYL  TRP+++F+ Q LS
Sbjct: 1111 KDSGLLGCKPASTPLDTSIKLHSAAGTPYADISGYRRIVGKLLYLNTTRPDIAFATQQLS 1170

Query: 3100 QYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGF 3279
            Q++  PT  H  AA R+ RY+K+ P +G+F+S TS + L  +SDADWA C ++R+SISG+
Sbjct: 1171 QFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGCMDSRKSISGY 1230

Query: 3280 AVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQS-LMYT 3456
              F+G SL+SW++KKQ T+SRSS+EAEYRA++   CE+QWL YL  D+ ++  ++  +Y 
Sbjct: 1231 CFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLRVQLTRTPTLYC 1290

Query: 3457 DSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPL 3624
            D++SA  I+ N   HERTKH+++DCH VREKL +G  KL+ + ++ Q AD  TK L
Sbjct: 1291 DNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVADFLTKAL 1346


>ref|XP_007024187.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
            gi|508779553|gb|EOY26809.1| Cysteine-rich RLK
            (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
          Length = 1255

 Score =  718 bits (1854), Expect = 0.0
 Identities = 374/807 (46%), Positives = 523/807 (64%), Gaps = 18/807 (2%)
 Frame = +1

Query: 1312 GIVERKHQHLLQVARALLFQSKVPLSFWDHCILTAAHIINRLPAPILHNKTPFEILFNKM 1491
            G+VERKHQH+L VARALLFQS +P  FW   ++TA HIINR+P  +L NK+ FE+L+ + 
Sbjct: 457  GVVERKHQHILVVARALLFQSSLPTHFWGDAVMTAVHIINRVPTRLLKNKSLFELLYKRQ 516

Query: 1492 PDYSHFKIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHV 1671
            P Y H ++FG L +VSTL+  R K   RA+KC+F+GYP  +KGY++YDL +++++ISR++
Sbjct: 517  PSYEHLRVFGSLCFVSTLSQHRKKLDQRATKCIFLGYPNNTKGYRVYDLNANRIIISRNI 576

Query: 1672 IFCENIFPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIV---------T 1824
            +F E  FPFQ     +  PE     +   +    Q  S   N + Q+ I          T
Sbjct: 577  VFHEGTFPFQS-KQHTTWPEPFCQTLGMHTKYSPQIDSKLPNFHCQDYIPADTYSSEPNT 635

Query: 1825 TTQIISDAQ-NDFADAQHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYL 2001
            + Q  S +Q NDF        +  T     +  +S+    N N P+ R+S+R++  P Y+
Sbjct: 636  SAQTPSTSQINDFEPNSLDTVSMPTATNNENVTSSNEHDPNENLPV-RKSTRHKHAPKYM 694

Query: 2002 QVYDCKIPPSIQSQHSAQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQA 2181
              Y   +P      H+         +PI  FLS   LS  +K F+  +S   EP +Y QA
Sbjct: 695  DAYHLDMP---SKSHNVTA------HPITKFLSTKNLSPAYKTFTTSLSYTFEPSTYHQA 745

Query: 2182 SKQKEWQDAMKAEIRALEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVA 2361
            +    W+DAM AE++AL+ N+TW +   P + H IGCKWVYKVK  ++G IERYKARLVA
Sbjct: 746  ASYSHWRDAMSAELKALQDNETWSIIPRPLNSHVIGCKWVYKVKLNADGQIERYKARLVA 805

Query: 2362 KGYTQEEGLDYFDTFSPVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLP 2541
            KGY Q  G DY +TFSPVAK TTVR+  A+A A  W L QLDVNNAFL+GDL EEVYM  
Sbjct: 806  KGYNQIAGFDYKETFSPVAKQTTVRVFFAIATAFNWHLTQLDVNNAFLNGDLKEEVYMDI 865

Query: 2542 PPGY-----LQSNDKKVCKLTKSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTM- 2703
            PPGY        N K VCKL KSLYGLKQASR+W  K+TS ++ YGFIQS +D SLFTM 
Sbjct: 866  PPGYEIQGEYPENVKLVCKLHKSLYGLKQASREWNAKITSLIIQYGFIQSNADRSLFTMK 925

Query: 2704 SHDDSITILCVYVDDIILAGNDISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGI 2883
            +++     L +YVDDI++        +A+KL L   F +KDLGT+KY LG+E+ARS KGI
Sbjct: 926  TNNGEFFALLLYVDDILVGSYSKQAADAMKLFLSSHFKLKDLGTVKYFLGLEIARSPKGI 985

Query: 2884 HICQRKYALDLLTETGFLGSKPSTTPMDCKAQF-SSNDSSPLTDASQYRRLIGRMLYLTI 3060
             I QRKY LDLL E G LG+KP +TP+D   +   + D   L ++  YR+L+ ++LYLT 
Sbjct: 986  SISQRKYTLDLLEEHGLLGAKPVSTPIDYNQKLVKAQDEEKLINSIDYRQLVKKLLYLTF 1045

Query: 3061 TRPELSFSIQTLSQYLSKPTTTHLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADW 3240
            +RP++++++Q LSQ++ KP+  H+ AAHR+ +Y+K +  +G+   S S L +  + D+DW
Sbjct: 1046 SRPDIAYAVQVLSQFMDKPSLEHMNAAHRVLKYLKGSLGQGILMKSESNLMIVGYCDSDW 1105

Query: 3241 ARCQETRRSISGFAVFLGDSLISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQD 3420
            A C  +R+SI+ + +F+G+SL++WK KKQ  +SRSS EA+YRA+A  +CEI WL +LL D
Sbjct: 1106 AGCPNSRKSITRYNMFIGNSLVTWKFKKQSVVSRSSEEAKYRAMASASCEIIWLKHLLAD 1165

Query: 3421 MHIKHPQS-LMYTDSRSAYCISQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQ 3597
              I+H  + ++Y+DS+S   IS+N   HERTKHI++DCHF+REK+ EG  K I+I +  Q
Sbjct: 1166 FGIEHKVAVVLYSDSQSTIHISKNPVFHERTKHIEMDCHFIREKVIEGTIKPIYISTDLQ 1225

Query: 3598 TADIFTKPLPPAQFNYLISKLSMLNIH 3678
             AD+FTK L P QF+ L++K+++ NIH
Sbjct: 1226 LADLFTKALQPRQFHNLLNKMNVHNIH 1252


>ref|XP_012486681.1| PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein
            from transposon TNT 1-94 [Gossypium raimondii]
          Length = 683

 Score =  696 bits (1797), Expect = 0.0
 Identities = 370/728 (50%), Positives = 481/728 (66%), Gaps = 3/728 (0%)
 Frame = +1

Query: 1510 KIFGCLAYVSTLTAQRHKFQARASKCVFIGYPLGSKGYKLYDLESHKVLISRHVIFCENI 1689
            +IFGCL++ STL+A R KF  RA +CVF+GY    KGY L D+E+  + +SR+V F E I
Sbjct: 3    RIFGCLSFASTLSAHRKKFDPRAKQCVFLGYKPHVKGYILLDIETRAIFVSRNVTFHETI 62

Query: 1690 FPFQEIASKSVSPEAPLFPISDLSSAQDQSFSHFQNINAQNDIVTTTQIISDAQNDFADA 1869
            FPF + +  +     P  P+  L+S                D +  + I S  Q    D 
Sbjct: 63   FPFLQHSLNN-----PTTPVGLLAS----------------DTIYDSPI-SPPQPSSTDQ 100

Query: 1870 QHGLAAQNTTVVQTDPVNSHIEHSNPNPPILRRSSRNRTNPSYLQVYDCKIPPSIQSQHS 2049
                             +S   H    P    R  RNR  PSYLQ Y          Q  
Sbjct: 101  -----------------SSSTSHPPTQPSTSSRPQRNRRPPSYLQDYQ-------HYQLP 136

Query: 2050 AQTIISGKQYPIQDFLSVDKLSNKHKAFSAQISQITEPKSYAQASKQKEWQDAMKAEIRA 2229
            A T   G  + I + +S   LS +H  F+  IS   EPK+Y QASK   W +AM+AEI A
Sbjct: 137  AATNHPGTPHSIFNCISYHNLSPQHLHFTLAISASIEPKTYKQASKFTHWNEAMQAEINA 196

Query: 2230 LEKNQTWIMTDLPADKHCIGCKWVYKVKYRSNGSIERYKARLVAKGYTQEEGLDYFDTFS 2409
            LE+N TW MT LP  K   GCKWV++VK+R++GS ERYKARLVAKGYTQ  G+DYFDTFS
Sbjct: 197  LEQNNTWTMTTLPPGKTPXGCKWVFRVKHRADGSTERYKARLVAKGYTQI-GVDYFDTFS 255

Query: 2410 PVAKITTVRLLIALAAAKGWFLHQLDVNNAFLHGDLHEEVYMLPPPGYLQSNDKKVCKLT 2589
            PVAKITTVRLL+ALA ++ W + QLDVNNAFLHGDL+E+VYMLPPPG+   +  KVCKL 
Sbjct: 256  PVAKITTVRLLLALATSRHWHIQQLDVNNAFLHGDLNEDVYMLPPPGF-SHDSTKVCKLH 314

Query: 2590 KSLYGLKQASRQWFQKLTSCLLNYGFIQSKSDSSLFTMSHDDSITILCVYVDDIILAGND 2769
            KS+YGLKQASRQWF KLT+ L++ G+IQS +D S+FT  H +  T+L +YVDDIIL G  
Sbjct: 315  KSIYGLKQASRQWFSKLTTALISLGYIQSTADHSMFTKKHSEDFTVLLIYVDDIILTGTS 374

Query: 2770 ISKIEAIKLHLDEKFTIKDLGTLKYILGIEVARSTKGIHICQRKYALDLLTETGFLGSKP 2949
              +I  +K  LD  F IKDLG LKY LG+EVAR+++GIHI QRKYAL++L E+GF+  KP
Sbjct: 375  SPEIMKVKQFLDTTFRIKDLGDLKYFLGLEVARTSQGIHISQRKYALEILQESGFIECKP 434

Query: 2950 STTPMDCKAQF--SSNDSSPLTDASQYRRLIGRMLYLTITRPELSFSIQTLSQYLSKPTT 3123
            + TPM  K+ +  +S D   L+D + YR+L+G++LYLT TR +L+F++Q LSQ++ KPTT
Sbjct: 435  AKTPMATKSVYKLTSTDGELLSDITSYRQLVGKLLYLTSTRLDLTFAVQQLSQFMDKPTT 494

Query: 3124 THLAAAHRI*RYIKSTPVKGLFYSSTSPLHLKCFSDADWARCQETRRSISGFAVFLGDSL 3303
             HL AAHR+ RY+K  P  GLFY ++S   LK FSD+DWA C ETRRSI+G+ +F G++L
Sbjct: 495  NHLQAAHRVLRYLKGCPSTGLFYPASSSFELKAFSDSDWAGCPETRRSITGYCIFFGEAL 554

Query: 3304 ISWKSKKQPTISRSSAEAEYRAIALTTCEIQWLTYLLQDMHIKHPQSL-MYTDSRSAYCI 3480
            ISW++KKQPT+SRSS+EAEYRA+A T CE+QWL YLL D+H+    +  ++ D++S   I
Sbjct: 555  ISWRAKKQPTVSRSSSEAEYRALASTVCEVQWLHYLLCDLHVPISHATPVFCDNKSTIQI 614

Query: 3481 SQNSCHHERTKHIQLDCHFVREKLQEGLFKLIHIPSTQQTADIFTKPLPPAQFNYLISKL 3660
            + N   HERTKHI++DCH VREKLQ+ +  L+   S+ Q AD+FTK L    F  +ISKL
Sbjct: 615  ASNPTFHERTKHIEIDCHIVREKLQKDIVHLLPCTSSAQLADLFTKALAAQPFQDMISKL 674

Query: 3661 SMLNIHAP 3684
             MLNIH+P
Sbjct: 675  GMLNIHSP 682