BLASTX nr result
ID: Rehmannia27_contig00008075
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00008075
(1588 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089756.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 459 e-156
ref|XP_011089755.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 459 e-156
ref|XP_012843062.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 417 e-140
emb|CDP18575.1| unnamed protein product [Coffea canephora] 387 e-128
gb|KDP30629.1| hypothetical protein JCGZ_16194 [Jatropha curcas] 378 e-124
ref|XP_012080828.1| PREDICTED: E3 ubiquitin-protein ligase RNF12... 378 e-124
ref|XP_008220737.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 375 e-123
ref|XP_007014039.1| RING/U-box superfamily protein, putative iso... 371 e-123
ref|XP_007205383.1| hypothetical protein PRUPE_ppa007335mg [Prun... 372 e-122
ref|XP_007014035.1| RING/U-box superfamily protein isoform 1 [Th... 371 e-122
ref|XP_009767589.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 369 e-121
ref|XP_009339205.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 370 e-121
ref|XP_008351262.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 369 e-121
ref|XP_010105294.1| E3 ubiquitin-protein ligase RING1 [Morus not... 366 e-120
ref|XP_002285765.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 ... 364 e-119
ref|XP_009621828.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 363 e-119
ref|XP_010044920.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 361 e-118
ref|XP_006348226.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 360 e-118
ref|XP_002303979.2| zinc finger family protein [Populus trichoca... 361 e-117
ref|XP_006348225.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 360 e-117
>ref|XP_011089756.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform X2 [Sesamum
indicum]
Length = 379
Score = 459 bits (1181), Expect = e-156
Identities = 239/342 (69%), Positives = 262/342 (76%), Gaps = 17/342 (4%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHA 394
+ YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEM+SAATPGN DS L FELGGSD+D A
Sbjct: 6 ASRYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMASAATPGN-DSSLGFELGGSDSDRA 64
Query: 395 LSLWAPILLGMMGNSXXXXXXXXXEFD-----DENDNNH---DGETEFDRELQSIMMRRR 550
LSLWAPILLGMMGN EF+ D+N+NNH DGETE DREL+SIM RRR
Sbjct: 65 LSLWAPILLGMMGNPRRRRRIRRMEFEEEENEDDNENNHRHLDGETELDRELESIMRRRR 124
Query: 551 RNSATILRLLQDMRAGILSESENLDNNEGPTDRNN----ERVILINPFDQTIIVQGSYD- 715
R+SATIL+LLQ +RAGILSES N + ++ DR+N ERVILINPF+QTIIVQGSYD
Sbjct: 125 RSSATILQLLQGIRAGILSESANSETDQRIRDRDNDRDRERVILINPFNQTIIVQGSYDP 184
Query: 716 SNDSQNRAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETL 895
++DSQNRA PIGSLGDYF+GPGL+LLLQHLSENDPNRYGTPPAQKEAVEALP VK+ ETL
Sbjct: 185 TSDSQNRA-PIGSLGDYFIGPGLDLLLQHLSENDPNRYGTPPAQKEAVEALPTVKVEETL 243
Query: 896 QCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDL----X 1063
QCSVCLD+CEIG EVKEMPCKHKFHS CILPWLELHSSCP+CRYQ+PCDE KLD
Sbjct: 244 QCSVCLDDCEIGTEVKEMPCKHKFHSSCILPWLELHSSCPICRYQIPCDELKLDAEGTRN 303
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
QFSV LPWPFS LF
Sbjct: 304 NNTNSSQEISIDNNNAGNGGDDRNENGRQFSVSLPWPFSSLF 345
>ref|XP_011089755.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform X1 [Sesamum
indicum]
Length = 398
Score = 459 bits (1181), Expect = e-156
Identities = 239/342 (69%), Positives = 262/342 (76%), Gaps = 17/342 (4%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHA 394
+ YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEM+SAATPGN DS L FELGGSD+D A
Sbjct: 25 ASRYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMASAATPGN-DSSLGFELGGSDSDRA 83
Query: 395 LSLWAPILLGMMGNSXXXXXXXXXEFD-----DENDNNH---DGETEFDRELQSIMMRRR 550
LSLWAPILLGMMGN EF+ D+N+NNH DGETE DREL+SIM RRR
Sbjct: 84 LSLWAPILLGMMGNPRRRRRIRRMEFEEEENEDDNENNHRHLDGETELDRELESIMRRRR 143
Query: 551 RNSATILRLLQDMRAGILSESENLDNNEGPTDRNN----ERVILINPFDQTIIVQGSYD- 715
R+SATIL+LLQ +RAGILSES N + ++ DR+N ERVILINPF+QTIIVQGSYD
Sbjct: 144 RSSATILQLLQGIRAGILSESANSETDQRIRDRDNDRDRERVILINPFNQTIIVQGSYDP 203
Query: 716 SNDSQNRAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETL 895
++DSQNRA PIGSLGDYF+GPGL+LLLQHLSENDPNRYGTPPAQKEAVEALP VK+ ETL
Sbjct: 204 TSDSQNRA-PIGSLGDYFIGPGLDLLLQHLSENDPNRYGTPPAQKEAVEALPTVKVEETL 262
Query: 896 QCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDL----X 1063
QCSVCLD+CEIG EVKEMPCKHKFHS CILPWLELHSSCP+CRYQ+PCDE KLD
Sbjct: 263 QCSVCLDDCEIGTEVKEMPCKHKFHSSCILPWLELHSSCPICRYQIPCDELKLDAEGTRN 322
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
QFSV LPWPFS LF
Sbjct: 323 NNTNSSQEISIDNNNAGNGGDDRNENGRQFSVSLPWPFSSLF 364
>ref|XP_012843062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Erythranthe
guttata] gi|604322435|gb|EYU32821.1| hypothetical protein
MIMGU_mgv1a008674mg [Erythranthe guttata]
Length = 366
Score = 417 bits (1071), Expect = e-140
Identities = 218/333 (65%), Positives = 241/333 (72%), Gaps = 11/333 (3%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCHMCSQTVNPI+ IDTIKCPICQSGFVEEMSSAA P NN + LDFELGG+D D +LSL
Sbjct: 9 YWCHMCSQTVNPIMGIDTIKCPICQSGFVEEMSSAAAPENNATTLDFELGGADQDRSLSL 68
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGETEFDRELQSIMMRRRRNSATILRLLQ 583
WAPILLGMM + + ENDN E+E DREL+SIM RRRR+SATIL+LLQ
Sbjct: 69 WAPILLGMMDHPHRRRRIINPPAEFENDNE---ESELDRELESIMRRRRRSSATILQLLQ 125
Query: 584 DMRAGILSESENLDNNEGPTDR----NNERVILINPFDQTIIVQGSYDSNDSQNRAAPIG 751
+RAGILSES N + N+ R N ERVILINP +QTIIVQGS++ N+ P+G
Sbjct: 126 GIRAGILSESANSEANQNQPSRDRLSNPERVILINPVNQTIIVQGSFEPNNGSQSREPLG 185
Query: 752 SLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCLDECEIG 931
SLGDYF+GPGLELLLQHLSENDPNRYG+PPAQKEAVEALP VK+AET QCSVCLDECEIG
Sbjct: 186 SLGDYFIGPGLELLLQHLSENDPNRYGSPPAQKEAVEALPMVKLAETQQCSVCLDECEIG 245
Query: 932 VEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD-------LXXXXXXXXXX 1090
EVKEMPCKHKFH+ CILPWLELHSSCPVCRYQLP DESK+D
Sbjct: 246 DEVKEMPCKHKFHNGCILPWLELHSSCPVCRYQLPGDESKIDSNNIVNNQESESNNIVNG 305
Query: 1091 XXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
QFSV LPWPFS LF
Sbjct: 306 NNNGGGENSGDERNESGARQFSV-LPWPFSSLF 337
>emb|CDP18575.1| unnamed protein product [Coffea canephora]
Length = 384
Score = 387 bits (995), Expect = e-128
Identities = 203/353 (57%), Positives = 238/353 (67%), Gaps = 31/353 (8%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH CS+ V+PI+EI+TIKCPICQ GFVEEMS+ N++P DF SD+D ALSL
Sbjct: 9 YWCHACSRVVSPIMEIETIKCPICQGGFVEEMSTVG----NEAPPDFGGSASDSDRALSL 64
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDEN---DNNHDGE------------------TEFDR 520
WAPILLGMM N EF+D++ D +HDGE TE DR
Sbjct: 65 WAPILLGMMSNPRRRRRFRRLEFEDDDHDDDYDHDGELNSNNHHHHHHHRNEGEETELDR 124
Query: 521 ELQSIMMRRRRNSATILRLLQDMRAGILSESENLDNNEGPTD----RNNERVILINPFDQ 688
EL+SI+ RRR +SAT+L+LLQ +RAG+LSES+N N+ P R+ ERVILINPF+Q
Sbjct: 125 ELESIIRRRRSSSATVLQLLQGIRAGMLSESDNSRNDARPPRDREIRDGERVILINPFNQ 184
Query: 689 TIIVQGSYDSNDSQNRAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEAL 868
TIIVQGSYDSN S ++ P GSLGDYFVGPGL+LLLQHL+ENDPNRYGTPPAQKEAVEA+
Sbjct: 185 TIIVQGSYDSNSSDSQNQPFGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAVEAM 244
Query: 869 PDVKIAETLQCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDES 1048
P V + ET QCSVCL++ EIG E KEMPCKH+FH CILPWLELHSSCPVCRYQLP DES
Sbjct: 245 PSVTVEETSQCSVCLEDFEIGAEAKEMPCKHRFHVGCILPWLELHSSCPVCRYQLPSDES 304
Query: 1049 KLDL------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
KL+ +FS+PLPWPFS LF
Sbjct: 305 KLESRVSRNGSNNNDAGGNNAAASGSEGGEGGGRSENTRRFSLPLPWPFSSLF 357
>gb|KDP30629.1| hypothetical protein JCGZ_16194 [Jatropha curcas]
Length = 377
Score = 378 bits (971), Expect = e-124
Identities = 190/280 (67%), Positives = 224/280 (80%), Gaps = 2/280 (0%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH+CSQ V PI+EI+ IKCP C+SGFVEE+SS + + D DF +D ALSL
Sbjct: 5 YWCHLCSQMVIPIMEIE-IKCPYCESGFVEEISSRSRD-SQDPDTDFS-----SDRALSL 57
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGE-TEFDRELQSIMMRRRRNSATILRLL 580
WAPILLGMMGNS EF+D++D+N DG +E DREL+S + RRRRNSATIL+LL
Sbjct: 58 WAPILLGMMGNSRRRRRFRRTEFEDDDDDNDDGGVSELDRELESFVRRRRRNSATILQLL 117
Query: 581 QDMRAGILSESENLDNNEGPTDRNNERVILINPFDQTIIVQGSYDSNDSQNRA-APIGSL 757
Q +RAGI+SESENL N+EG DR E VILINP ++TIIVQGSYDS++ N+ P+GSL
Sbjct: 118 QGIRAGIVSESENL-NSEGDRDREREGVILINPLNRTIIVQGSYDSSNGPNQNHTPVGSL 176
Query: 758 GDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCLDECEIGVE 937
GDYFVGPGL+LLLQHL+ENDPNRYGTPPA KEA+EALP+V I ET+QCSVCLD+ E+G E
Sbjct: 177 GDYFVGPGLDLLLQHLAENDPNRYGTPPALKEAIEALPNVTIKETIQCSVCLDDLEVGTE 236
Query: 938 VKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
KEMPCKHKFHS C+LPWLELHSSCPVCR+QLP DESK D
Sbjct: 237 AKEMPCKHKFHSNCLLPWLELHSSCPVCRFQLPADESKSD 276
>ref|XP_012080828.1| PREDICTED: E3 ubiquitin-protein ligase RNF126-like [Jatropha curcas]
gi|802659340|ref|XP_012080829.1| PREDICTED: E3
ubiquitin-protein ligase RNF126-like [Jatropha curcas]
Length = 381
Score = 378 bits (971), Expect = e-124
Identities = 190/280 (67%), Positives = 224/280 (80%), Gaps = 2/280 (0%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH+CSQ V PI+EI+ IKCP C+SGFVEE+SS + + D DF +D ALSL
Sbjct: 9 YWCHLCSQMVIPIMEIE-IKCPYCESGFVEEISSRSRD-SQDPDTDFS-----SDRALSL 61
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGE-TEFDRELQSIMMRRRRNSATILRLL 580
WAPILLGMMGNS EF+D++D+N DG +E DREL+S + RRRRNSATIL+LL
Sbjct: 62 WAPILLGMMGNSRRRRRFRRTEFEDDDDDNDDGGVSELDRELESFVRRRRRNSATILQLL 121
Query: 581 QDMRAGILSESENLDNNEGPTDRNNERVILINPFDQTIIVQGSYDSNDSQNRA-APIGSL 757
Q +RAGI+SESENL N+EG DR E VILINP ++TIIVQGSYDS++ N+ P+GSL
Sbjct: 122 QGIRAGIVSESENL-NSEGDRDREREGVILINPLNRTIIVQGSYDSSNGPNQNHTPVGSL 180
Query: 758 GDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCLDECEIGVE 937
GDYFVGPGL+LLLQHL+ENDPNRYGTPPA KEA+EALP+V I ET+QCSVCLD+ E+G E
Sbjct: 181 GDYFVGPGLDLLLQHLAENDPNRYGTPPALKEAIEALPNVTIKETIQCSVCLDDLEVGTE 240
Query: 938 VKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
KEMPCKHKFHS C+LPWLELHSSCPVCR+QLP DESK D
Sbjct: 241 AKEMPCKHKFHSNCLLPWLELHSSCPVCRFQLPADESKSD 280
>ref|XP_008220737.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Prunus mume]
gi|645215171|ref|XP_008220813.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like [Prunus mume]
Length = 370
Score = 375 bits (963), Expect = e-123
Identities = 203/340 (59%), Positives = 233/340 (68%), Gaps = 18/340 (5%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH CSQ V+PI+E++ +KCPICQSGF+EEM+S T N+++ DF +D ALSL
Sbjct: 6 YWCHACSQMVDPIMEVE-MKCPICQSGFIEEMNSN-TRDNHEADSDF-----GSDRALSL 58
Query: 404 WAPILLGMMGNSXXXXXXXXXEFD-DENDNNHDGE------TEFDRELQSIMMRRRRNSA 562
WAPILLGMM N +FD DE+D+N DGE TE DREL+SI+ RRRRNSA
Sbjct: 59 WAPILLGMMNNPHRRRRLRRLDFDEDEDDDNDDGEARHGGDTELDRELESIIRRRRRNSA 118
Query: 563 TILRLLQDMRAGILSESENLDNN-------EGPTDRNNERVILINPFDQTIIVQGSYDSN 721
TIL+LLQ +RAG SESEN +++ E +R ERVILINPF QTIIVQGSYDSN
Sbjct: 119 TILQLLQGIRAGSASESENSESDRDRDRDRERERERERERVILINPFSQTIIVQGSYDSN 178
Query: 722 DSQNRA-APIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQ 898
QN P+GSLGDYF+GPGL+LLLQHL+ENDPNRYGTPPAQKEAVEALP V I E LQ
Sbjct: 179 HGQNNNHTPMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKENLQ 238
Query: 899 CSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDLXXXXXX 1078
CSVCLD+ E GVE KEMPCKHKFHS CILPWLELHSSCPVCR+QLP DESK D
Sbjct: 239 CSVCLDDFEAGVEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSDNSRNS 298
Query: 1079 XXXXXXXXXXXXXXXXXXXXXXXQFS---VPLPWPFSGLF 1189
S +PWPF+GLF
Sbjct: 299 SDQRESENIGGDGGGVEGDGDGRNGSGRRFSIPWPFNGLF 338
>ref|XP_007014039.1| RING/U-box superfamily protein, putative isoform 5, partial
[Theobroma cacao] gi|508784402|gb|EOY31658.1| RING/U-box
superfamily protein, putative isoform 5, partial
[Theobroma cacao]
Length = 310
Score = 371 bits (952), Expect = e-123
Identities = 190/292 (65%), Positives = 227/292 (77%), Gaps = 14/292 (4%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSP-LDFELGGSDTDHALS 400
YWCH CS+ VNPI+E++ IKCP+C++GF+EEMSS G DS +D ++G +D ALS
Sbjct: 9 YWCHQCSRIVNPIMEVE-IKCPVCETGFIEEMSS----GTRDSEDIDSDIG---SDRALS 60
Query: 401 LWAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGE------TEFDRELQSIMMRRRRNSA 562
LWAPILLGMMGN +F++E+D+N DGE T+ DREL+SI+ RRRR+SA
Sbjct: 61 LWAPILLGMMGNPRRRRRHRRIDFEEEDDDNDDGEARHGGDTDLDRELESIIRRRRRSSA 120
Query: 563 TILRLLQDMRAGILSESENLDNNEG-----PTDRNNERVILINPFDQTIIVQGSYDSNDS 727
TIL+LLQ +R G+ SE+EN +N+ DR ERVILINPF+QTIIVQGSYDSN
Sbjct: 121 TILQLLQGIRDGMASEAENSENDRDRDTSRDRDRERERVILINPFNQTIIVQGSYDSNQG 180
Query: 728 -QNRAAP-IGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQC 901
QN+ + IGSLGDYFVGPGL+LLLQHL+ENDPNRYGTPPAQKEA+EA+P VKI E LQC
Sbjct: 181 GQNQNSNHIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAIEAMPTVKIEENLQC 240
Query: 902 SVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
SVCLD+ E G E +EMPCKHKFHS CILPWLELHSSCPVCRYQ+P DESKLD
Sbjct: 241 SVCLDDFEAGSEAREMPCKHKFHSGCILPWLELHSSCPVCRYQMPADESKLD 292
>ref|XP_007205383.1| hypothetical protein PRUPE_ppa007335mg [Prunus persica]
gi|462401025|gb|EMJ06582.1| hypothetical protein
PRUPE_ppa007335mg [Prunus persica]
Length = 372
Score = 372 bits (955), Expect = e-122
Identities = 201/342 (58%), Positives = 233/342 (68%), Gaps = 20/342 (5%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH+CSQ V+PI+E++ +KCP CQSGF+EEM+S T ++++ DF +D ALSL
Sbjct: 6 YWCHVCSQMVDPIMEVE-MKCPFCQSGFIEEMNSN-TRDSHEADSDF-----GSDRALSL 58
Query: 404 WAPILLGMMGNSXXXXXXXXXEFD-DENDNNHDGE------TEFDRELQSIMMRRRRNSA 562
WAPILLGMM N +FD DE+D+N DGE TE DREL+SI+ RRRRNSA
Sbjct: 59 WAPILLGMMNNPHRRRRLRRLDFDEDEDDDNDDGEARHGGDTELDRELESIIRRRRRNSA 118
Query: 563 TILRLLQDMRAGILSESENLDNN---------EGPTDRNNERVILINPFDQTIIVQGSYD 715
TIL+LLQ +RAG SESEN +++ E +R ERVILINPF QTIIVQGSYD
Sbjct: 119 TILQLLQGIRAGSASESENSESDRDRDRDRDRERERERERERVILINPFSQTIIVQGSYD 178
Query: 716 SNDSQNRA-APIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAET 892
SN QN P+GSLGDYF+GPGL+LLLQHL+ENDPNRYGTPPAQKEAVEALP V I E
Sbjct: 179 SNQGQNNNHTPMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKEN 238
Query: 893 LQCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDLXXXX 1072
LQCSVCLD+ E GVE KEMPCKHKFHS CILPWLELHSSCPVCR+QLP DESK D
Sbjct: 239 LQCSVCLDDFEAGVEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSDNSR 298
Query: 1073 XXXXXXXXXXXXXXXXXXXXXXXXXQFS---VPLPWPFSGLF 1189
S +PWPF+GLF
Sbjct: 299 NSSDQRESENIGGDGGGVEGDGDGRNGSGRRFSIPWPFNGLF 340
>ref|XP_007014035.1| RING/U-box superfamily protein isoform 1 [Theobroma cacao]
gi|590580324|ref|XP_007014036.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|590580327|ref|XP_007014037.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|590580331|ref|XP_007014038.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784398|gb|EOY31654.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784399|gb|EOY31655.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784400|gb|EOY31656.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
gi|508784401|gb|EOY31657.1| RING/U-box superfamily
protein isoform 1 [Theobroma cacao]
Length = 367
Score = 371 bits (953), Expect = e-122
Identities = 199/340 (58%), Positives = 238/340 (70%), Gaps = 18/340 (5%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSP-LDFELGGSDTDHALS 400
YWCH CS+ VNPI+E++ IKCP+C++GF+EEMSS G DS +D ++G +D ALS
Sbjct: 9 YWCHQCSRIVNPIMEVE-IKCPVCETGFIEEMSS----GTRDSEDIDSDIG---SDRALS 60
Query: 401 LWAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGE------TEFDRELQSIMMRRRRNSA 562
LWAPILLGMMGN +F++E+D+N DGE T+ DREL+SI+ RRRR+SA
Sbjct: 61 LWAPILLGMMGNPRRRRRHRRIDFEEEDDDNDDGEARHGGDTDLDRELESIIRRRRRSSA 120
Query: 563 TILRLLQDMRAGILSESENLDNNEG-----PTDRNNERVILINPFDQTIIVQGSYDSNDS 727
TIL+LLQ +R G+ SE+EN +N+ DR ERVILINPF+QTIIVQGSYDSN
Sbjct: 121 TILQLLQGIRDGMASEAENSENDRDRDTSRDRDRERERVILINPFNQTIIVQGSYDSNQG 180
Query: 728 -QNRAAP-IGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQC 901
QN+ + IGSLGDYFVGPGL+LLLQHL+ENDPNRYGTPPAQKEA+EA+P VKI E LQC
Sbjct: 181 GQNQNSNHIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAQKEAIEAMPTVKIEENLQC 240
Query: 902 SVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDL----XXX 1069
SVCLD+ E G E +EMPCKHKFHS CILPWLELHSSCPVCRYQ+P DESKLD
Sbjct: 241 SVCLDDFEAGSEAREMPCKHKFHSGCILPWLELHSSCPVCRYQMPADESKLDTERPRNNT 300
Query: 1070 XXXXXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
+FS PWPF+GLF
Sbjct: 301 NQRESENNVHGSGEEGEGDGRSGSGRRFS--FPWPFNGLF 338
>ref|XP_009767589.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana
sylvestris] gi|698546046|ref|XP_009767590.1| PREDICTED:
E3 ubiquitin-protein ligase RING1-like [Nicotiana
sylvestris]
Length = 343
Score = 369 bits (948), Expect = e-121
Identities = 194/330 (58%), Positives = 231/330 (70%), Gaps = 5/330 (1%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHA 394
+ YWCH CS+ V+P +E++ +KCPICQ GFVEEM S ++ L+ +LGGSD+D A
Sbjct: 6 ASRYWCHQCSRRVDPAMEVE-LKCPICQQGFVEEMGS-------ETALENDLGGSDSDRA 57
Query: 395 LSLWAPILLGMMGNSXXXXXXXXX--EFDDENDNNHD---GETEFDRELQSIMMRRRRNS 559
LSLWAPILLGMM N EFD ++D++H GETE D EL SIM RRRRNS
Sbjct: 58 LSLWAPILLGMMSNPRRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNS 117
Query: 560 ATILRLLQDMRAGILSESENLDNNEGPTDRNNERVILINPFDQTIIVQGSYDSNDSQNRA 739
ATIL+LLQ +RAG+ E+ + +N+ ERVIL+NPF+QTIIVQGSYDS+ N
Sbjct: 118 ATILQLLQSIRAGM--ENADGENSRETVRDGEERVILVNPFNQTIIVQGSYDSD---NND 172
Query: 740 APIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCLDE 919
PIGSLGDYF+GPGL++LLQHL+ENDPNRYGTPPAQKEAVEALP VKI ETLQCSVCL++
Sbjct: 173 RPIGSLGDYFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVEALPAVKIDETLQCSVCLED 232
Query: 920 CEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDLXXXXXXXXXXXXX 1099
EIG E KEMPCKHKFHS CILPWLELHS+CPVCR+QLP DESK++
Sbjct: 233 FEIGTEAKEMPCKHKFHSECILPWLELHSTCPVCRHQLPSDESKVE----------NVTG 282
Query: 1100 XXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
+F V LPWP SGLF
Sbjct: 283 NTNAAQSSDTRNENGRRFPVSLPWPLSGLF 312
>ref|XP_009339205.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Pyrus x
bretschneideri] gi|694422763|ref|XP_009339206.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like [Pyrus
x bretschneideri] gi|694422765|ref|XP_009339207.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like [Pyrus
x bretschneideri]
Length = 375
Score = 370 bits (949), Expect = e-121
Identities = 190/293 (64%), Positives = 220/293 (75%), Gaps = 15/293 (5%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCHMCSQ VNPI+EI+ +KCP CQSGF+EEM+ T N D+ DF +D ALSL
Sbjct: 9 YWCHMCSQMVNPIMEIE-MKCPFCQSGFIEEMNGT-TRDNQDADSDF-----GSDRALSL 61
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDEND---NNHDGET------EFDRELQSIMMRRRRN 556
WAPILLGMM N +FD+++D NN DGET E DREL+SI+ RRRR+
Sbjct: 62 WAPILLGMMNNPRRRRRLRRLDFDEDDDDDNNNDDGETRQGRDTELDRELESIIRRRRRS 121
Query: 557 SATILRLLQDMRAGILSESENLDNNEG-----PTDRNNERVILINPFDQTIIVQGSYDSN 721
SA+ L+LLQ +RAG+ SESEN + + +R ERVILINPF+QTIIVQGSYDSN
Sbjct: 122 SASFLQLLQGIRAGLASESENSEGDRDRDRGRERERERERVILINPFNQTIIVQGSYDSN 181
Query: 722 DSQ-NRAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQ 898
Q N PI SLGDYF+GPGL+LLLQHL+ENDPNRYGTPPAQKEAVEALP V I E +Q
Sbjct: 182 QGQINNHTPISSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPAVTIKENMQ 241
Query: 899 CSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
CSVCLD+ E+GVE KEMPCKHKFHS CILPWL+LHSSCPVCR+QLP DESK D
Sbjct: 242 CSVCLDDFEVGVEAKEMPCKHKFHSGCILPWLDLHSSCPVCRFQLPADESKRD 294
>ref|XP_008351262.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Malus domestica]
gi|657951121|ref|XP_008351269.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like [Malus domestica]
Length = 378
Score = 369 bits (946), Expect = e-121
Identities = 197/342 (57%), Positives = 235/342 (68%), Gaps = 20/342 (5%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH CS+ V+PI+E++ +KCP CQSGF+EEM+ T N D+ D +LG +D ALSL
Sbjct: 9 YWCHRCSRMVDPIMEVE-MKCPFCQSGFIEEMNGT-TRENQDA--DSDLG---SDRALSL 61
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDENDNNHD-----------GETEFDRELQSIMMRRR 550
WAPILLGMM N +FDD++D+++D G+TE DREL+SI+ RRR
Sbjct: 62 WAPILLGMMNNPHRRRRLRRFDFDDDDDDDNDNDNDDGDTRQGGDTELDRELESIIRRRR 121
Query: 551 RNSATILRLLQDMRAGILSESENLDNN---EGPTDRNNERVILINPFDQTIIVQGSYDSN 721
R+SATIL+LLQ +RAG+ SESEN + + + +R ERVILINPF QTIIVQGSYDSN
Sbjct: 122 RSSATILQLLQGIRAGLASESENSEGDRERDRERERERERVILINPFXQTIIVQGSYDSN 181
Query: 722 DSQNRA-APIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQ 898
QN PIGSLGDY++GPGL+LLLQHL+ENDPNRYGTPPAQKEAVEALP V I E LQ
Sbjct: 182 QGQNNNHTPIGSLGDYYIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKENLQ 241
Query: 899 CSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDL-----X 1063
CSVCLD+ E+G E KEMPCKHKFHS CILPWLELHSSCPVCR+QLP DESK D
Sbjct: 242 CSVCLDDFEVGXEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSDISRNS 301
Query: 1064 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
+FS+ PWPF+GLF
Sbjct: 302 SNSRESEEIGDDVGGEEGDGDGRNGNGRRFSI--PWPFNGLF 341
>ref|XP_010105294.1| E3 ubiquitin-protein ligase RING1 [Morus notabilis]
gi|587916612|gb|EXC04259.1| E3 ubiquitin-protein ligase
RING1 [Morus notabilis]
Length = 381
Score = 366 bits (939), Expect = e-120
Identities = 187/297 (62%), Positives = 225/297 (75%), Gaps = 16/297 (5%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSP-----LDFELGGS 379
+ YWCHMCSQ VNPI+E++ IKCP CQSGFVEEMSS + NN +P DF
Sbjct: 6 ASRYWCHMCSQEVNPIMEVE-IKCPFCQSGFVEEMSSIDSSNNNPNPEGGRNADFSDSDF 64
Query: 380 DTDHALSLWAPILLGMMGNSXXXXXXXXXEFDDENDNN---------HDGETEFDRELQS 532
+D ALSLWAPILLGMMG+ +FDD +D++ H GETE DREL+S
Sbjct: 65 GSDRALSLWAPILLGMMGHPRRRRRFRRLDFDDYDDHDVVDDGESEDHGGETELDRELES 124
Query: 533 IMMRRRRNSATILRLLQDMRAGILSESENLDN-NEGPTDRNN-ERVILINPFDQTIIVQG 706
I+ RRRR+SATIL+LLQ +RAG+ SES+N ++ +G +R+ ERVILINPF+QT++VQG
Sbjct: 125 IIRRRRRSSATILQLLQGIRAGLASESQNSESFRDGDRERDERERVILINPFNQTVLVQG 184
Query: 707 SYDSNDSQNRAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIA 886
N++QN PIGSLGDYF+GPGL++LLQHL+ENDPNRYGTPPAQKEAVEALP V I
Sbjct: 185 Q---NENQN---PIGSLGDYFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVEALPTVAIK 238
Query: 887 ETLQCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
E LQCSVCLD+ EIG + KEMPCKHKFH+ CILPWLELHSSCPVCR+QLP +ESK D
Sbjct: 239 ENLQCSVCLDDFEIGADAKEMPCKHKFHNGCILPWLELHSSCPVCRFQLPSNESKRD 295
>ref|XP_002285765.1| PREDICTED: E3 ubiquitin-protein ligase CIP8 [Vitis vinifera]
gi|225435818|ref|XP_002285766.1| PREDICTED: E3
ubiquitin-protein ligase CIP8 [Vitis vinifera]
Length = 368
Score = 364 bits (935), Expect = e-119
Identities = 181/290 (62%), Positives = 218/290 (75%), Gaps = 12/290 (4%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCH CSQ VNPI E + KCP+CQ GF+E++ A+ +NDS D +D LSL
Sbjct: 9 YWCHSCSQVVNPIAEAEP-KCPLCQDGFIEDIDGTASRDHNDSDSDLA-----SDRTLSL 62
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGE------TEFDRELQSIMMRRRRNSAT 565
WAPILLGMMGN + +DE ++N DGE TE DREL SI+ RRRR+SAT
Sbjct: 63 WAPILLGMMGNPRRRRRFRREDIEDEEEDNEDGEGRRGGETELDRELDSIIRRRRRSSAT 122
Query: 566 ILRLLQDMRAGILSESENLDNN-----EGPTDRNNERVILINPFDQTIIVQGSYDSNDSQ 730
IL+LLQ +RAG++SESEN +N+ + +R ER+ILINPF+QTIIVQGS+DSN +Q
Sbjct: 123 ILQLLQGIRAGMVSESENSENDRDRDRDRERERERERLILINPFNQTIIVQGSFDSNQAQ 182
Query: 731 NRAA-PIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSV 907
N+ IGSLGDYF+GP L+LLLQHL+ENDPNRYGTPPAQK+A+EA+P VKI E LQCSV
Sbjct: 183 NQNQNTIGSLGDYFIGPSLDLLLQHLAENDPNRYGTPPAQKDAIEAMPTVKIKENLQCSV 242
Query: 908 CLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
CLD+ EIG E +EMPCKHKFHS CILPWLELHSSCPVCR+Q+ DESKLD
Sbjct: 243 CLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRFQIAADESKLD 292
>ref|XP_009621828.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Nicotiana
tomentosiformis] gi|697135544|ref|XP_009621829.1|
PREDICTED: E3 ubiquitin-protein ligase RING1-like
[Nicotiana tomentosiformis]
Length = 342
Score = 363 bits (932), Expect = e-119
Identities = 190/329 (57%), Positives = 228/329 (69%), Gaps = 4/329 (1%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHA 394
+ YWCH CS+ V+P +E++ +KCPICQ GFVEEM S ++ L+ + GGSD+D A
Sbjct: 6 ASRYWCHQCSRRVDPTLEVE-LKCPICQQGFVEEMGS-------ETALENDFGGSDSDRA 57
Query: 395 LSLWAPILLGMMGNSXXXXXXXXX-EFDDENDNNHD---GETEFDRELQSIMMRRRRNSA 562
LSLWAPILLGMM N EFD ++D++H GETE D EL SIM RRRRNS
Sbjct: 58 LSLWAPILLGMMSNPRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNST 117
Query: 563 TILRLLQDMRAGILSESENLDNNEGPTDRNNERVILINPFDQTIIVQGSYDSNDSQNRAA 742
TIL+LLQ +RAG+ E+ + +N+ ERVIL+NPF+QTIIVQGSYDS+ N
Sbjct: 118 TILQLLQSIRAGM--ENADGENSREAGRDGEERVILVNPFNQTIIVQGSYDSD---NNDR 172
Query: 743 PIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCLDEC 922
PIGSLGDYF+GPGL++LLQHL+ENDPNRYGTPPAQKE VEALP VKI ET+QCSVCL++
Sbjct: 173 PIGSLGDYFIGPGLDMLLQHLAENDPNRYGTPPAQKEVVEALPAVKIDETMQCSVCLEDF 232
Query: 923 EIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDLXXXXXXXXXXXXXX 1102
EIG E KEMPCKHKFHS CILPWLELHS+CPVCR+QLP DESK++
Sbjct: 233 EIGTEAKEMPCKHKFHSGCILPWLELHSTCPVCRHQLPSDESKVE----------NVTDN 282
Query: 1103 XXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
+F V LPWP SGLF
Sbjct: 283 TNAAQSSDTRNENGRRFPVSLPWPLSGLF 311
>ref|XP_010044920.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Eucalyptus grandis]
gi|629122549|gb|KCW87039.1| hypothetical protein
EUGRSUZ_B03585 [Eucalyptus grandis]
gi|629122550|gb|KCW87040.1| hypothetical protein
EUGRSUZ_B03585 [Eucalyptus grandis]
Length = 379
Score = 361 bits (927), Expect = e-118
Identities = 198/349 (56%), Positives = 233/349 (66%), Gaps = 27/349 (7%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSP-LDFELGGSDTDHALS 400
YWC+MCS+TVNPI+E + IKCPIC+SGFVEEM + G DS D +LG +D S
Sbjct: 9 YWCYMCSRTVNPIMEFE-IKCPICESGFVEEMEA----GIGDSQGHDSDLG---SDRTFS 60
Query: 401 LWAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGE------TEFDRELQSIMMRRRRNSA 562
LWAPILLGMMG+S EFDDE+D+N DGE TE DRE++SI+ RRRR+SA
Sbjct: 61 LWAPILLGMMGHSHRRRISRRLEFDDEDDDNEDGESRLEGETELDREIESIIRRRRRSSA 120
Query: 563 TILRLLQDMRAGILSESENLDNN--------------EGPTDRNNERVILINPFDQTIIV 700
TIL+LLQ +RAGI +ES++ + N + DR ERVI INPF+QTIIV
Sbjct: 121 TILQLLQGIRAGIAAESDDANRNRDVDREDGERDRDRDRDRDREQERVIFINPFNQTIIV 180
Query: 701 QGS-YDSNDSQNRAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDV 877
QGS YDS ++N IGSLGDYF+GPGL++LLQHL+ENDPNRYGTPPAQKEAVE++P V
Sbjct: 181 QGSSYDSTRNENT---IGSLGDYFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVESMPTV 237
Query: 878 KIAETLQCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
I E LQCSVCLD+ EIG E KEMPCKHKFHS CILPWLELHSSCPVCR+QLP DESKLD
Sbjct: 238 TIKENLQCSVCLDDFEIGAEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKLD 297
Query: 1058 LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQFS-----VPLPWPFSGLF 1189
+ + PWPFSGLF
Sbjct: 298 SDGSRNGNNIRQRERESENSHESGEDGNGDERNGNNRRFAFPWPFSGLF 346
>ref|XP_006348226.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform X3 [Solanum
tuberosum] gi|565362992|ref|XP_006348227.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform X3 [Solanum
tuberosum] gi|565362994|ref|XP_006348228.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform X3 [Solanum
tuberosum] gi|971551965|ref|XP_015164595.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform X3 [Solanum
tuberosum] gi|971551967|ref|XP_015164596.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform X3 [Solanum
tuberosum] gi|971551969|ref|XP_015164597.1| PREDICTED: E3
ubiquitin-protein ligase RING1 isoform X3 [Solanum
tuberosum]
Length = 360
Score = 360 bits (924), Expect = e-118
Identities = 191/337 (56%), Positives = 235/337 (69%), Gaps = 12/337 (3%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHA 394
+ YWCH CS+ VNP++E++ +KCPICQ GF+EEM S T ++PLD + SD+D A
Sbjct: 6 ASRYWCHHCSRRVNPMMEVE-LKCPICQLGFIEEMGSDTT----ETPLDSD---SDSDRA 57
Query: 395 LSLWAPILLGMMGNSXXXXXXXXXEFDDENDNNH--DGETEFDRELQSIMMRRRRNSATI 568
LSLWAPILLGMM N EF+D++D++H + +T+ D +L SI+ RRRRNSATI
Sbjct: 58 LSLWAPILLGMMTNPRRRSRLRHLEFEDDDDDDHTREADTQLDPDLASIINRRRRNSATI 117
Query: 569 LRLLQDMRAGILSESENLD-NNE----GPTDRNNERVILINPFDQTIIVQGSYDSNDSQN 733
L+LLQ +RAG+L+ESEN + +NE G R+ ERVILINPF+QTIIVQGS D+ +
Sbjct: 118 LQLLQGIRAGMLAESENPNPDNENRETGRESRDRERVILINPFNQTIIVQGS----DNNS 173
Query: 734 RAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCL 913
R PIGSLGDYF+GPGL++LLQHL+ENDPNRYGTPPAQKE VEALP V I ETLQCSVCL
Sbjct: 174 RNQPIGSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETLQCSVCL 233
Query: 914 DECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDL-----XXXXXX 1078
++ EIG E KEMPCKH+FH CILPWLELHS+CPVCR+QLP DESK++
Sbjct: 234 EDFEIGTEAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTNDGSGSNT 293
Query: 1079 XXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
+F V LPWP SGLF
Sbjct: 294 NAQSSNGNGRRYEDEDTRNENGRRFPVSLPWPLSGLF 330
>ref|XP_002303979.2| zinc finger family protein [Populus trichocarpa]
gi|550343656|gb|EEE78958.2| zinc finger family protein
[Populus trichocarpa]
Length = 388
Score = 361 bits (926), Expect = e-117
Identities = 188/294 (63%), Positives = 223/294 (75%), Gaps = 16/294 (5%)
Frame = +2
Query: 224 YWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHALSL 403
YWCHMCSQ VNPI+ ++ IKCP CQ+GF+E+M + G+N P D E G +D ALSL
Sbjct: 17 YWCHMCSQMVNPIMGVE-IKCPFCQNGFIEDMIDST--GDNQVP-DSEFG---SDRALSL 69
Query: 404 WAPILLGMMGNSXXXXXXXXXEFDDENDNNHDGET------EFDRELQSIMMRRRR---N 556
WAP+LLGM+GNS E++++ D N DGE EF+RE++S M RRRR N
Sbjct: 70 WAPVLLGMVGNSHRRRRLRRVEYEEDEDGNDDGEANHAGEPEFEREIESFMRRRRRSRRN 129
Query: 557 SATILRLLQDMRAGIL-SESENLDNNEG-----PTDRNNERVILINPFDQTIIVQGSYDS 718
SATIL+LLQ +RAGIL SESENL+ + +R ERVILINPF+Q+IIVQGSYDS
Sbjct: 130 SATILQLLQGIRAGILVSESENLEGDRDRDRVRDMNRERERVILINPFNQSIIVQGSYDS 189
Query: 719 NDSQNRAA-PIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETL 895
N+ QN+ IGSLGDY +GPGL+LLLQHL+ENDPNRYGTPPAQKEA+EALP V + E L
Sbjct: 190 NNVQNQNQNAIGSLGDYVIGPGLDLLLQHLAENDPNRYGTPPAQKEAIEALPTVTVKEPL 249
Query: 896 QCSVCLDECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLD 1057
QCSVCLD+ EIG E +EMPCKHKFHS CILPWLELHSSCPVCR+QLP DESKLD
Sbjct: 250 QCSVCLDDFEIGAEAREMPCKHKFHSGCILPWLELHSSCPVCRHQLPADESKLD 303
>ref|XP_006348225.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform X2 [Solanum
tuberosum]
Length = 378
Score = 360 bits (924), Expect = e-117
Identities = 191/337 (56%), Positives = 235/337 (69%), Gaps = 12/337 (3%)
Frame = +2
Query: 215 SQNYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMSSAATPGNNDSPLDFELGGSDTDHA 394
+ YWCH CS+ VNP++E++ +KCPICQ GF+EEM S T ++PLD + SD+D A
Sbjct: 24 ASRYWCHHCSRRVNPMMEVE-LKCPICQLGFIEEMGSDTT----ETPLDSD---SDSDRA 75
Query: 395 LSLWAPILLGMMGNSXXXXXXXXXEFDDENDNNH--DGETEFDRELQSIMMRRRRNSATI 568
LSLWAPILLGMM N EF+D++D++H + +T+ D +L SI+ RRRRNSATI
Sbjct: 76 LSLWAPILLGMMTNPRRRSRLRHLEFEDDDDDDHTREADTQLDPDLASIINRRRRNSATI 135
Query: 569 LRLLQDMRAGILSESENLD-NNE----GPTDRNNERVILINPFDQTIIVQGSYDSNDSQN 733
L+LLQ +RAG+L+ESEN + +NE G R+ ERVILINPF+QTIIVQGS D+ +
Sbjct: 136 LQLLQGIRAGMLAESENPNPDNENRETGRESRDRERVILINPFNQTIIVQGS----DNNS 191
Query: 734 RAAPIGSLGDYFVGPGLELLLQHLSENDPNRYGTPPAQKEAVEALPDVKIAETLQCSVCL 913
R PIGSLGDYF+GPGL++LLQHL+ENDPNRYGTPPAQKE VEALP V I ETLQCSVCL
Sbjct: 192 RNQPIGSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVEALPVVTIDETLQCSVCL 251
Query: 914 DECEIGVEVKEMPCKHKFHSRCILPWLELHSSCPVCRYQLPCDESKLDL-----XXXXXX 1078
++ EIG E KEMPCKH+FH CILPWLELHS+CPVCR+QLP DESK++
Sbjct: 252 EDFEIGTEAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTNDGSGSNT 311
Query: 1079 XXXXXXXXXXXXXXXXXXXXXXXQFSVPLPWPFSGLF 1189
+F V LPWP SGLF
Sbjct: 312 NAQSSNGNGRRYEDEDTRNENGRRFPVSLPWPLSGLF 348