BLASTX nr result
ID: Rehmannia27_contig00008050
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00008050
(1009 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011080605.1| PREDICTED: DNA-directed RNA polymerase III s... 383 e-131
ref|XP_011081983.1| PREDICTED: DNA-directed RNA polymerase III s... 372 e-127
ref|XP_012843484.1| PREDICTED: DNA-directed RNA polymerase III s... 340 e-114
emb|CDP07151.1| unnamed protein product [Coffea canephora] 310 e-101
ref|XP_009620517.1| PREDICTED: DNA-directed RNA polymerase III s... 281 2e-91
ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III s... 280 5e-91
ref|XP_009774782.1| PREDICTED: DNA-directed RNA polymerase III s... 278 5e-90
ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III s... 276 1e-89
ref|XP_015932888.1| PREDICTED: DNA-directed RNA polymerase III s... 276 3e-89
ref|XP_009625703.1| PREDICTED: DNA-directed RNA polymerase III s... 275 8e-89
emb|CBI33284.3| unnamed protein product [Vitis vinifera] 275 3e-88
ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III s... 269 1e-86
ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III s... 269 1e-86
ref|XP_009785680.1| PREDICTED: DNA-directed RNA polymerase III s... 269 2e-86
ref|XP_011008461.1| PREDICTED: DNA-directed RNA polymerase III s... 267 9e-86
ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III s... 266 2e-85
ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Popu... 266 9e-85
ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III s... 263 2e-84
ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III s... 264 2e-84
ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III s... 263 3e-84
>ref|XP_011080605.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Sesamum indicum]
Length = 239
Score = 383 bits (983), Expect = e-131
Identities = 191/240 (79%), Positives = 210/240 (87%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 375
MSR V+PS LKRKRPET PGLVDAE AILN IK K+DLGIW R+IK ETKL D+VV K
Sbjct: 1 MSRRPVNPS-LKRKRPETDSPGLVDAERAILNSIKGKKDLGIWARDIKQETKLTDHVVNK 59
Query: 376 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 555
S+KSLLAK LIKEVVNIQNK KK YMAVEFEPSKEISGGEWY +G LDK+LI+ LK +CF
Sbjct: 60 SLKSLLAKKLIKEVVNIQNKGKKHYMAVEFEPSKEISGGEWYVDGNLDKELINVLKQLCF 119
Query: 556 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 735
RY+R QKVATLEGV+NE+KKN VVTFDIS+QQ+ EILNSMVLDND+IEVKSTGLGDY+SI
Sbjct: 120 RYLRTQKVATLEGVYNELKKNRVVTFDISNQQVSEILNSMVLDNDLIEVKSTGLGDYHSI 179
Query: 736 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGIDF 915
PIG CYR+A AGVAKGPRMGAFA+IPCGACPRISLCT +GVIS TCVYYTKWL IDF
Sbjct: 180 PIGTVCYRIASAAGVAKGPRMGAFASIPCGACPRISLCTPNGVISPGTCVYYTKWLSIDF 239
>ref|XP_011081983.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Sesamum indicum]
Length = 239
Score = 372 bits (955), Expect = e-127
Identities = 187/240 (77%), Positives = 207/240 (86%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 375
MSRSLVSPS LKRKRPET PGL+DAE AIL+ IK K+DLG W R+IK ETKL D+VV K
Sbjct: 1 MSRSLVSPS-LKRKRPETGPPGLIDAERAILDSIKGKKDLGNWARDIKQETKLTDHVVNK 59
Query: 376 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 555
S+KSLLAK LIKEVVNIQNK KK YM+VEFEPSKEISGGEWY +G LDK+LI+ LK +C
Sbjct: 60 SLKSLLAKKLIKEVVNIQNKGKKHYMSVEFEPSKEISGGEWYVDGNLDKELINILKQLCL 119
Query: 556 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 735
RY+R+QKVA LEGVHN++KKN VVTF+IS QQ+GEILNSMVLDNDIIEVKSTGLGDY+SI
Sbjct: 120 RYLRVQKVAILEGVHNDLKKNRVVTFEISCQQVGEILNSMVLDNDIIEVKSTGLGDYHSI 179
Query: 736 PIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGIDF 915
PIG CYR A GAG KGPR+GAFAT+ GACPRISLCT DGVIS STCVYYTKWL IDF
Sbjct: 180 PIGTICYRFANGAGAGKGPRLGAFATVRFGACPRISLCTPDGVISPSTCVYYTKWLNIDF 239
>ref|XP_012843484.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6
[Erythranthe guttata] gi|604321791|gb|EYU32313.1|
hypothetical protein MIMGU_mgv1a012840mg [Erythranthe
guttata]
Length = 238
Score = 340 bits (871), Expect = e-114
Identities = 164/235 (69%), Positives = 201/235 (85%), Gaps = 1/235 (0%)
Frame = +1
Query: 214 SPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLL 393
S ++LKR+RP T GL+D+E A+LN IKSK ++GIWTR+IKLET L D VV+KSVKSL+
Sbjct: 4 SNANLKRRRPGTDESGLIDSERAVLNSIKSKGNMGIWTRDIKLETNLTDPVVSKSVKSLM 63
Query: 394 AKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQ 573
AK LIKEVVNIQNK KK YM+VEFEPSKEISGGEWY+NG LDK+LI A++ +C R++R Q
Sbjct: 64 AKNLIKEVVNIQNKGKKHYMSVEFEPSKEISGGEWYSNGALDKELIKAVQDMCLRFLRAQ 123
Query: 574 KVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTC 753
KV T+EGVHN++KK+ V+TF+ S +Q+ +ILNSMVLDN+IIEVKS+GLGDY+SIPIG C
Sbjct: 124 KVTTIEGVHNDLKKSRVLTFEPSREQVVDILNSMVLDNNIIEVKSSGLGDYHSIPIGTVC 183
Query: 754 YRVAGGAGVAK-GPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGIDF 915
YRVA GAGVAK GP+ G FA+IPCGACPRIS+CT DG IS +TCVYYTKWL ++F
Sbjct: 184 YRVASGAGVAKGGPKKGGFASIPCGACPRISVCTPDGPISPATCVYYTKWLNVEF 238
>emb|CDP07151.1| unnamed protein product [Coffea canephora]
Length = 334
Score = 310 bits (795), Expect = e-101
Identities = 152/238 (63%), Positives = 192/238 (80%), Gaps = 2/238 (0%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS+ + SSLKRKRPE+ LVDA+ A+ N+IKSK D+GIWTR+IK ETKLAD VV
Sbjct: 96 MSRSM-NASSLKRKRPESSSANGSLVDADRAVFNVIKSKEDMGIWTRDIKFETKLADTVV 154
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+KSLL+K LIKE+VNI+NK +K YMA EFEPSKE++GG WY +G LDK+LI LK +
Sbjct: 155 NKSLKSLLSKKLIKEIVNIKNKGRKHYMAAEFEPSKEVTGGAWYVDGNLDKELIGVLKGL 214
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C + + +KVAT+EGV++ + K+ V TFD ++QQI E+LNSMVLDN++IEVKSTGLG+Y+
Sbjct: 215 CLKIINSKKVATVEGVYDFLTKSKVTTFDCTNQQIAEVLNSMVLDNEVIEVKSTGLGEYH 274
Query: 730 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
SIPIG CYR+A GAG+ + ++GA A+IPCG CPRIS CT DGVIS STCVYY KW+
Sbjct: 275 SIPIGTVCYRIAKGAGLGESLKIGAMASIPCGMCPRISQCTPDGVISPSTCVYYQKWM 332
>ref|XP_009620517.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tomentosiformis]
Length = 240
Score = 281 bits (719), Expect = 2e-91
Identities = 141/243 (58%), Positives = 182/243 (74%), Gaps = 3/243 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS + +++KRKRP+ P GL DAE +L+L+K+KR+LGIW E+K E L +V
Sbjct: 1 MSRSREA-TTMKRKRPDLDSPTRGLPDAERVVLSLVKNKRNLGIWVVEVKKEANLPPTLV 59
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+ +L+ K LIK+VVNIQNK KK YMAVEFEPS+E++GG WY+ G LDK+ I L+
Sbjct: 60 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDT 119
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
CF+ + + KVAT+EG+HN +KK VV + +SQQI EILNSMVLDN IIEVKSTGLG+Y+
Sbjct: 120 CFKVIELLKVATVEGIHNFLKKRKVV--ECTSQQIAEILNSMVLDNAIIEVKSTGLGEYH 177
Query: 730 SIPIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLG 906
SIP+G CYR + G + GP+ +G A+IPCGACPRIS C+ +GVIS TCVYYTKWL
Sbjct: 178 SIPVGSVCYRTSSGVALGTGPKTIGPMASIPCGACPRISQCSPNGVISPQTCVYYTKWLN 237
Query: 907 IDF 915
+F
Sbjct: 238 TEF 240
>ref|XP_004245997.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like
[Solanum lycopersicum] gi|970044133|ref|XP_015083473.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc6-like [Solanum pennellii]
Length = 237
Score = 280 bits (716), Expect = 5e-91
Identities = 139/241 (57%), Positives = 185/241 (76%), Gaps = 1/241 (0%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 375
MSRS + ++LKRKRP++ GLVDAE +LN++KSK++ G+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AALKRKRPDSSTQGLVDAELVVLNVVKSKKNQGVWVADVKKEANIAPALVDK 59
Query: 376 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 555
+ SL+ K LIK+V +IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPSIQNKAKKYYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 556 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 735
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDSIIEVKSTGLGEYHSI 178
Query: 736 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGID 912
PIG CYR+A GV GP+ +G A+IPCGACPRIS+CT DG+IS TCVY+TKWL I+
Sbjct: 179 PIGSVCYRIA--VGVTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYFTKWLDIE 236
Query: 913 F 915
F
Sbjct: 237 F 237
>ref|XP_009774782.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana sylvestris]
Length = 240
Score = 278 bits (710), Expect = 5e-90
Identities = 139/243 (57%), Positives = 179/243 (73%), Gaps = 3/243 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS +++KRKRP+ P GL DAE +L+L+K+K++LGIW E+K E L +V
Sbjct: 1 MSRSR-EEAAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLV 59
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+ +L+ K LIK+VVNIQNK KK YMAVEFEPS+E++GG WY+ G LDK+ I L+
Sbjct: 60 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDT 119
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C + + + KVAT+EG+HN +KK VV + +SQQI EILNSMVLDN IIEVKSTGLG+Y+
Sbjct: 120 CLKVIELLKVATVEGIHNFLKKRKVV--ECTSQQIAEILNSMVLDNAIIEVKSTGLGEYH 177
Query: 730 SIPIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLG 906
IP+G CYR A G + GP+ +G A+IPCGACPRIS C+ +GVIS TCVYYTKWL
Sbjct: 178 PIPVGSVCYRTASGVALGTGPKTIGPMASIPCGACPRISQCSPNGVISPQTCVYYTKWLN 237
Query: 907 IDF 915
+F
Sbjct: 238 TEF 240
>ref|XP_006366884.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc6 [Solanum
tuberosum]
Length = 237
Score = 276 bits (707), Expect = 1e-89
Identities = 138/241 (57%), Positives = 183/241 (75%), Gaps = 1/241 (0%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPGLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTK 375
MSRS + +++KRKR ++ GLVDAE +LN++KSK++LG+W ++K E +A +V K
Sbjct: 1 MSRSSEA-AAMKRKRLDSSTQGLVDAEFVVLNVVKSKKNLGVWVADVKKEANIAPALVDK 59
Query: 376 SVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCF 555
+ SL+ K LIK+V IQNKAKK YMAVE+EPS+E++GG WY+ G+LDK+ I L+ C
Sbjct: 60 CLTSLVKKNLIKKVPTIQNKAKKHYMAVEYEPSEELTGGAWYSEGKLDKEFITVLRETCL 119
Query: 556 RYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSI 735
+ + M KVAT+EG+H+ +KK VV +SQQ+GEILNSMVLD+ IIEVKSTGLG+Y+SI
Sbjct: 120 KVIGMMKVATVEGIHDFLKKRKVVEC-CTSQQVGEILNSMVLDDAIIEVKSTGLGEYHSI 178
Query: 736 PIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLGID 912
PIG CYR+A G GP+ +G A+IPCGACPRIS+CT DG+IS TCVYYTKWL I+
Sbjct: 179 PIGSACYRIA--VGDTSGPKTIGPMASIPCGACPRISVCTPDGIISPKTCVYYTKWLNIE 236
Query: 913 F 915
F
Sbjct: 237 F 237
>ref|XP_015932888.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Arachis duranensis] gi|1012210061|ref|XP_015932889.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Arachis duranensis]
gi|1012210065|ref|XP_015932890.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like
[Arachis duranensis]
Length = 239
Score = 276 bits (705), Expect = 3e-89
Identities = 135/237 (56%), Positives = 176/237 (74%), Gaps = 1/237 (0%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG-LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVT 372
MSR S SSLKRKR + L D E + NLI SKRD+GIW+ ++K ET L DNVV
Sbjct: 1 MSRLQGSSSSLKRKRELALVSDTLTDGERVLYNLILSKRDMGIWSGDMKRETNLPDNVVK 60
Query: 373 KSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVC 552
KS+K L +KGLIKEVVNIQNKA+K YMA +FEPSKEI+GG+WY+ G LDK+LI+A+K VC
Sbjct: 61 KSLKLLQSKGLIKEVVNIQNKARKHYMAAQFEPSKEITGGDWYSEGNLDKELINAVKSVC 120
Query: 553 FRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYS 732
+Y+ QKV T +GV +K+GV T ++S+QQI EIL ++VLD++IIEVKSTG GD+ +
Sbjct: 121 LKYISRQKVVTCDGVLEWSRKSGVFTAEVSNQQIEEILRTLVLDDEIIEVKSTGYGDFEN 180
Query: 733 IPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
+P+G+ CY+ GV P+ GA ++IPCG CPRI+ C+ DG++S TCVYY KWL
Sbjct: 181 VPVGRVCYKCKSKGGVRGEPKDGAMSSIPCGVCPRINFCSPDGIVSPRTCVYYQKWL 237
>ref|XP_009625703.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana tomentosiformis]
Length = 240
Score = 275 bits (702), Expect = 8e-89
Identities = 138/243 (56%), Positives = 180/243 (74%), Gaps = 3/243 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS + +++KRKRP+ P GL DAE +L+L+K+K++LGIW E+K E L +V
Sbjct: 1 MSRSREA-AAMKRKRPDLDSPTRGLPDAECVVLSLVKNKKNLGIWVAEVKKEANLPPTLV 59
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+ +L+ K LIK+VVNIQNK KK YMAVEFEPS+E++GG WY+ G LDK+ I L+
Sbjct: 60 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFEPSEELTGGSWYSEGNLDKEFITVLRDT 119
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
CF+ + + KVAT+EG+HN +KK VV + + QQI EILNSMVLDN IIEVKSTGLG+Y+
Sbjct: 120 CFKVIELLKVATVEGIHNFLKKRKVV--ECTGQQIAEILNSMVLDNAIIEVKSTGLGEYH 177
Query: 730 SIPIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLG 906
SIP+G CYR + G + GP+ +G A+IPCGAC RIS C+ +GVIS TCVYYTKWL
Sbjct: 178 SIPVGSVCYRTSSGVALGTGPKTIGPMASIPCGACRRISQCSPNGVISPQTCVYYTKWLN 237
Query: 907 IDF 915
+F
Sbjct: 238 TEF 240
>emb|CBI33284.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 275 bits (704), Expect = 3e-88
Identities = 144/272 (52%), Positives = 181/272 (66%), Gaps = 3/272 (1%)
Frame = +1
Query: 97 AKSVFPPAQRENHRTHAILSGEFFRPFAVEIEGMSRSLVSPSSLKRKRPETQLPG--LVD 270
++S+ PP HR + E GMSRS SSLKRKRP+T L+D
Sbjct: 39 SQSIHPPYSLHPHRNPPLFLSE----------GMSRS--QGSSLKRKRPDTNTASQPLLD 86
Query: 271 AEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTY 450
AE + +LI+SK D+GIWTR++K ET L DNVVTKS+K+L K LIKEVVNIQ+K +K Y
Sbjct: 87 AERVLYDLIRSKEDMGIWTRDMKRETNLPDNVVTKSLKALQVKKLIKEVVNIQSKGRKHY 146
Query: 451 MAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVT 630
MAVEFEPSKE++GG WY G LD + I LK C R + KVAT EG+ I K G+
Sbjct: 147 MAVEFEPSKELTGGAWYVEGNLDTEYIKILKKTCVRVLSKLKVATAEGISESINKTGLCA 206
Query: 631 FDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCYRVAGGAGV-AKGPRMGAF 807
+ S+QQI EIL ++VLDN+I+EV+S+G G++ SIPIG CYR G+ GP +GA
Sbjct: 207 TECSTQQIAEILRALVLDNEIMEVRSSGSGEFSSIPIGAVCYRCTNKGGLGGGGPTIGAM 266
Query: 808 ATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 267 ASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 298
>ref|XP_010647482.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 269 bits (688), Expect = 1e-86
Identities = 137/239 (57%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKKT 118
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 730 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_003635403.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 269 bits (687), Expect = 1e-86
Identities = 137/239 (57%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS SSLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGSSLKRKRPDTNTASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C R + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVRVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 730 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
SIPIG CYR G+ GP +GA A+IPCG CPRI+ CT DG+IS TC YYTKWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPTIGAMASIPCGVCPRITQCTPDGIISPKTCAYYTKWL 237
>ref|XP_009785680.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Nicotiana sylvestris]
Length = 244
Score = 269 bits (687), Expect = 2e-86
Identities = 137/243 (56%), Positives = 178/243 (73%), Gaps = 3/243 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS + +++KRKRP+ P GL DAE +L+L+K+K++LGIW E+K E L +V
Sbjct: 5 MSRSREA-AAMKRKRPDLDSPTQGLPDAERVVLSLVKNKKNLGIWVAEVKKEANLPPTLV 63
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+ +L+ K LIK+VVNIQNK KK YMAVEFE S+E++GG WY+ G LDK+ I L+
Sbjct: 64 DKSLTALVKKKLIKQVVNIQNKGKKHYMAVEFECSEELTGGSWYSEGNLDKEFITVLRDT 123
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C + + + KVAT+EG+HN +KK VV + +SQQI EILNSMVLDN IIEVKST LG+Y+
Sbjct: 124 CLKVIELLKVATVEGIHNFLKKRKVV--ECTSQQIVEILNSMVLDNAIIEVKSTELGEYH 181
Query: 730 SIPIGKTCYRVAGGAGVAKGPR-MGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWLG 906
SIP+G CYR A G + GP+ +G A+IPCGACPRIS C+ +GVI TCVYYTKWL
Sbjct: 182 SIPVGLVCYRTASGVALGTGPKTIGPMASIPCGACPRISQCSPNGVICPQTCVYYTKWLN 241
Query: 907 IDF 915
+F
Sbjct: 242 TEF 244
>ref|XP_011008461.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
[Populus euphratica] gi|743928510|ref|XP_011008462.1|
PREDICTED: DNA-directed RNA polymerase III subunit
RPC6-like [Populus euphratica]
Length = 241
Score = 267 bits (682), Expect = 9e-86
Identities = 131/239 (54%), Positives = 173/239 (72%), Gaps = 3/239 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS S SSLKRKRP P L+D E + ++I+SK+D+GIWTR++K ET L DNVV
Sbjct: 1 MSRSQGSSSSLKRKRPGLSSPSQSLIDHERKLYDVIRSKKDMGIWTRDMKKETNLPDNVV 60
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+K+L AK LIKEVVNIQNK +K YMA EF+PSKE++GG WY G LD I +L++
Sbjct: 61 NKSLKALHAKNLIKEVVNIQNKGRKHYMATEFQPSKELTGGSWYVAGSLDTDFIGSLRMF 120
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C +Y+ +KVAT+E V I+ NG +++ QQ+ EI+ ++VLD++++EVKS G+G++
Sbjct: 121 CVKYIAEEKVATVEQVTELIRGNGAFAVEVTKQQVEEIVRALVLDDEVMEVKSNGMGEFG 180
Query: 730 SIPIGKTCYRVAG-GAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
S+P+G CY+ G G G +GA A+IPCG CPRISLCT DGVIS TCVYYTKWL
Sbjct: 181 SVPVGNVCYKCVGKGRGGGVKAVIGAMASIPCGVCPRISLCTPDGVISPRTCVYYTKWL 239
>ref|XP_015872858.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ziziphus
jujuba]
Length = 238
Score = 266 bits (679), Expect = 2e-85
Identities = 133/238 (55%), Positives = 174/238 (73%), Gaps = 2/238 (0%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSR L P +LKRKRP++ P L + E + ++I+SK+D+GIWTR++K ET L DNVV
Sbjct: 1 MSR-LQGPLALKRKRPDSNSPSESLTEQERILYDVIRSKQDMGIWTRDMKRETNLPDNVV 59
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
KS+KSL AK LIKEVVNIQNK +K YMA EFEPSKEISGG WY G LD + ID LK
Sbjct: 60 NKSLKSLQAKKLIKEVVNIQNKGRKHYMAAEFEPSKEISGGAWYVEGSLDTEFIDLLKDQ 119
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C + + Q+VAT+EG+ + I++ G+ + S+QQI EIL ++VLDN +++VKS G+G++
Sbjct: 120 CAKIIYKQRVATVEGILDVIRRTGIFKVEFSTQQIEEILRALVLDNVVMDVKSNGMGEFD 179
Query: 730 SIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
SIP+GK CY+ GV P+ GA A+IPCG CPRI+ CT DG+IS +TCVYY KWL
Sbjct: 180 SIPVGKVCYKCT-NKGVRGEPKAGAMASIPCGVCPRINHCTPDGIISPTTCVYYNKWL 236
>ref|XP_002297621.2| hypothetical protein POPTR_0001s04090g [Populus trichocarpa]
gi|550346475|gb|EEE82426.2| hypothetical protein
POPTR_0001s04090g [Populus trichocarpa]
Length = 291
Score = 266 bits (680), Expect = 9e-85
Identities = 139/258 (53%), Positives = 175/258 (67%), Gaps = 2/258 (0%)
Frame = +1
Query: 136 RTHAILSGEFFRPFAVEIEGMSRSLVSPSSLKRKRPETQLP--GLVDAEHAILNLIKSKR 309
R A +G FR F V GMSR + PSSLKRKRPE P L + E + ++I+SK+
Sbjct: 34 RVPAYCTGCLFR-FDVLSVGMSR-VQGPSSLKRKRPELNSPVQSLTEHERILYDVIRSKQ 91
Query: 310 DLGIWTREIKLETKLADNVVTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISG 489
D+GIWTR++K E KL DNVV KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISG
Sbjct: 92 DIGIWTRDMKKEAKLPDNVVNKSLKALRVKNLIKEVVNIQNKGRKHFMATEFEPSKEISG 151
Query: 490 GEWYNNGELDKQLIDALKLVCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILN 669
G WY G LD + I++L+ +C R + + VATLE V + I D++ QQI EIL
Sbjct: 152 GAWYLEGSLDTEFIESLRQLCKRQIEKKGVATLEEVTDSINSYPAFNVDVTKQQIEEILR 211
Query: 670 SMVLDNDIIEVKSTGLGDYYSIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLC 849
+++LDN I+EVKS G+G++ SIP GK CYR + P+ GA A+IPCG CPRIS C
Sbjct: 212 TLILDNAIMEVKSNGMGEFASIPFGKVCYRYISKGALGGEPKAGALASIPCGVCPRISHC 271
Query: 850 TSDGVISQSTCVYYTKWL 903
T DG+IS TCVYY KWL
Sbjct: 272 TPDGIISPKTCVYYQKWL 289
>ref|XP_002509507.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis] gi|1000983018|ref|XP_015570361.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis] gi|1000983020|ref|XP_015570404.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6 [Ricinus
communis] gi|223549406|gb|EEF50894.1| DNA-directed RNA
polymerase III subunit F, putative [Ricinus communis]
Length = 236
Score = 263 bits (673), Expect = 2e-84
Identities = 130/229 (56%), Positives = 166/229 (72%), Gaps = 2/229 (0%)
Frame = +1
Query: 223 SLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVVTKSVKSLLA 396
+LKRK+PE+ P L + E + N+I SK+D+GIWTR++K ET L DNVV KS+K L A
Sbjct: 6 ALKRKQPESSSPAQSLTEHECTLYNVIWSKQDMGIWTRDMKRETNLPDNVVNKSLKVLQA 65
Query: 397 KGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLVCFRYMRMQK 576
K LIKEVVNIQNK +K YMA EFEPSKEI+GG WY G LD + I LK VC + + K
Sbjct: 66 KNLIKEVVNIQNKGRKHYMATEFEPSKEITGGAWYVEGNLDTEFIKLLKEVCTKQVLKLK 125
Query: 577 VATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYYSIPIGKTCY 756
VATLEG+ + IK++G+ +++ QQI EI+ ++VLDN +IEVKS G+ ++ IPIGK CY
Sbjct: 126 VATLEGITDSIKRSGIFNTELTKQQIEEIVKALVLDNALIEVKSNGMLEFSFIPIGKVCY 185
Query: 757 RVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
+ G A PR+GA A+IPCG CPRIS CT DG+IS TCVYY+KWL
Sbjct: 186 KCVGKGSTAGEPRIGAMASIPCGVCPRISQCTPDGIISPQTCVYYSKWL 234
>ref|XP_011003010.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like
isoform X2 [Populus euphratica]
Length = 258
Score = 264 bits (675), Expect = 2e-84
Identities = 133/239 (55%), Positives = 167/239 (69%), Gaps = 2/239 (0%)
Frame = +1
Query: 193 GMSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNV 366
GMSR L PSSLKRKRPE P L + E + ++I+SK+D+GIWTR++K E KL DNV
Sbjct: 19 GMSR-LQGPSSLKRKRPEVNSPAQSLNEHERLLYDVIRSKQDIGIWTRDMKKEAKLPDNV 77
Query: 367 VTKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKL 546
V KS+K+L K LIKEVVNIQNK +K +MA EFEPSKEISGG WY G LD + I++LK
Sbjct: 78 VNKSLKALQVKKLIKEVVNIQNKGRKHFMATEFEPSKEISGGAWYLEGSLDTEFIESLKQ 137
Query: 547 VCFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDY 726
+C R + VATLE V + I D++ QQI EIL +++LDN I+EVKS G+G++
Sbjct: 138 LCKRQIERSGVATLEAVTDSINSYPAFNVDVTKQQIEEILRTLILDNVIMEVKSNGMGEF 197
Query: 727 YSIPIGKTCYRVAGGAGVAKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
SIP G+ CY+ G+ P+ GA A+IPCG CPRIS CT DG+IS TCVYY KWL
Sbjct: 198 ASIPFGEVCYKYVSKGGLGGEPKAGALASIPCGVCPRISQCTPDGIISPKTCVYYQKWL 256
>ref|XP_002266428.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402737|ref|XP_010654780.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera] gi|731402739|ref|XP_010654781.1| PREDICTED:
DNA-directed RNA polymerase III subunit RPC6-like [Vitis
vinifera]
Length = 239
Score = 263 bits (672), Expect = 3e-84
Identities = 133/239 (55%), Positives = 169/239 (70%), Gaps = 3/239 (1%)
Frame = +1
Query: 196 MSRSLVSPSSLKRKRPETQLPG--LVDAEHAILNLIKSKRDLGIWTREIKLETKLADNVV 369
MSRS SLKRKRP+T L+DAE + +LI+SK D+GIWTR++K ET L DNVV
Sbjct: 1 MSRS--QGLSLKRKRPDTNAASQPLLDAERVLYDLIRSKEDMGIWTRDMKRETNLPDNVV 58
Query: 370 TKSVKSLLAKGLIKEVVNIQNKAKKTYMAVEFEPSKEISGGEWYNNGELDKQLIDALKLV 549
TKS+K+L K LIKEVVNIQ+K +K YMAVEFEPSKE++GG WY G LD + I LK
Sbjct: 59 TKSLKALQVKKLIKEVVNIQSKGRKHYMAVEFEPSKELTGGAWYVEGNLDTEYIKILKET 118
Query: 550 CFRYMRMQKVATLEGVHNEIKKNGVVTFDISSQQIGEILNSMVLDNDIIEVKSTGLGDYY 729
C + + KVAT EG+ I K G+ + S+QQI EIL ++VLDN+I+EV+S+G G++
Sbjct: 119 CVKVLSKLKVATAEGISESINKTGLCATECSTQQIAEILRALVLDNEIMEVRSSGSGEFS 178
Query: 730 SIPIGKTCYRVAGGAGV-AKGPRMGAFATIPCGACPRISLCTSDGVISQSTCVYYTKWL 903
SIPIG CYR G+ GP++GA A+IPCG CPRI+ CT DG+IS +C YY KWL
Sbjct: 179 SIPIGAVCYRCTNKGGLGGGGPKIGAMASIPCGVCPRITQCTPDGIISPKSCAYYAKWL 237