BLASTX nr result
ID: Rehmannia27_contig00007802
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00007802
(1087 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007024669.1| Small nuclear ribonucleoprotein family prote... 53 1e-12
gb|KVI05858.1| Like-Sm (LSM) domain-containing protein [Cynara c... 52 8e-11
ref|XP_011079585.1| PREDICTED: probable U6 snRNA-associated Sm-l... 60 9e-08
gb|EPS67133.1| hypothetical protein M569_07641 [Genlisea aurea] 60 9e-08
ref|XP_006598838.1| PREDICTED: sm-like protein LSM1B [Glycine ma... 57 4e-07
ref|XP_012831319.1| PREDICTED: sm-like protein LSM1B [Erythranth... 58 5e-07
ref|XP_014516656.1| PREDICTED: sm-like protein LSM1B isoform X2 ... 57 6e-07
ref|XP_014516657.1| PREDICTED: sm-like protein LSM1B [Vigna radi... 57 8e-07
ref|XP_011072603.1| PREDICTED: probable U6 snRNA-associated Sm-l... 57 8e-07
ref|XP_008380788.1| PREDICTED: probable U6 snRNA-associated Sm-l... 57 8e-07
ref|XP_007135420.1| hypothetical protein PHAVU_010G127900g [Phas... 57 8e-07
ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria v... 57 8e-07
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin... 57 8e-07
ref|XP_010033722.1| PREDICTED: probable U6 snRNA-associated Sm-l... 57 1e-06
gb|KYP50472.1| U6 snRNA-associated Sm-like protein LSm1 [Cajanus... 57 2e-06
ref|XP_012856715.1| PREDICTED: sm-like protein LSM1B [Erythranth... 57 2e-06
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote... 56 2e-06
dbj|BAT98277.1| hypothetical protein VIGAN_09192000 [Vigna angul... 56 3e-06
dbj|BAT98276.1| hypothetical protein VIGAN_09191900 [Vigna angul... 56 3e-06
gb|KDO64963.1| hypothetical protein CISIN_1g0321082mg [Citrus si... 55 3e-06
>ref|XP_007024669.1| Small nuclear ribonucleoprotein family protein isoform 2 [Theobroma
cacao] gi|508780035|gb|EOY27291.1| Small nuclear
ribonucleoprotein family protein isoform 2 [Theobroma
cacao]
Length = 110
Score = 53.1 bits (126), Expect(2) = 1e-12
Identities = 24/30 (80%), Positives = 29/30 (96%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEI+RAQKAEREA +LKGTM+KRM+FLD+D
Sbjct: 81 AEIRRAQKAEREARDLKGTMRKRMEFLDLD 110
Score = 48.5 bits (114), Expect(2) = 1e-12
Identities = 27/45 (60%), Positives = 28/45 (62%)
Frame = -3
Query: 629 WAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGTLRSFDQFANAV 495
+ GPEDIYLSTSLASY GTLRSFDQFANAV
Sbjct: 3 YLGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAV 47
>gb|KVI05858.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 107
Score = 51.6 bits (122), Expect(2) = 8e-11
Identities = 28/45 (62%), Positives = 28/45 (62%)
Frame = -3
Query: 629 WAGPEDIYLSTSLASYXXXXXXXXXXXXXXXXGTLRSFDQFANAV 495
WAGPEDIYLSTSLASY G LRSFDQFANAV
Sbjct: 3 WAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAV 47
Score = 44.3 bits (103), Expect(2) = 8e-11
Identities = 19/25 (76%), Positives = 24/25 (96%)
Frame = -2
Query: 429 AQKAEREASELKGTMKKRMDFLDMD 355
AQK EREA++LKG+M+KRM+FLDMD
Sbjct: 83 AQKVEREATDLKGSMRKRMEFLDMD 107
>ref|XP_011079585.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Sesamum indicum]
Length = 128
Score = 60.1 bits (144), Expect = 9e-08
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEI+RAQKAEREASELKGTMKKRMDFLDMD
Sbjct: 99 AEIRRAQKAEREASELKGTMKKRMDFLDMD 128
>gb|EPS67133.1| hypothetical protein M569_07641 [Genlisea aurea]
Length = 128
Score = 60.1 bits (144), Expect = 9e-08
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEI+RAQKAEREASELKGTMKKRMDFLDMD
Sbjct: 99 AEIRRAQKAEREASELKGTMKKRMDFLDMD 128
>ref|XP_006598838.1| PREDICTED: sm-like protein LSM1B [Glycine max]
gi|947056805|gb|KRH06211.1| hypothetical protein
GLYMA_16G009500 [Glycine max]
Length = 95
Score = 57.4 bits (137), Expect = 4e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD D
Sbjct: 65 TAEIKRAQKAEREASDLKGTMRKRMEFLDFD 95
>ref|XP_012831319.1| PREDICTED: sm-like protein LSM1B [Erythranthe guttata]
gi|604347738|gb|EYU45893.1| hypothetical protein
MIMGU_mgv1a016267mg [Erythranthe guttata]
Length = 128
Score = 58.2 bits (139), Expect = 5e-07
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
T EIKRAQKAEREASELKGTM KRMDFLDMD
Sbjct: 98 TEEIKRAQKAEREASELKGTMIKRMDFLDMD 128
>ref|XP_014516656.1| PREDICTED: sm-like protein LSM1B isoform X2 [Vigna radiata var.
radiata]
Length = 116
Score = 57.4 bits (137), Expect = 6e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD D
Sbjct: 86 TAEIKRAQKAEREASDLKGTMRKRMEFLDFD 116
>ref|XP_014516657.1| PREDICTED: sm-like protein LSM1B [Vigna radiata var. radiata]
Length = 128
Score = 57.4 bits (137), Expect = 8e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD D
Sbjct: 98 TAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>ref|XP_011072603.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Sesamum indicum]
Length = 128
Score = 57.4 bits (137), Expect = 8e-07
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TA+I++AQKA+REASELKGTMK+RMDFLDMD
Sbjct: 98 TADIRKAQKADREASELKGTMKRRMDFLDMD 128
>ref|XP_008380788.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1 [Malus
domestica] gi|658013046|ref|XP_008341819.1| PREDICTED:
probable U6 snRNA-associated Sm-like protein LSm1 [Malus
domestica] gi|694451285|ref|XP_009350857.1| PREDICTED:
probable U6 snRNA-associated Sm-like protein LSm1 [Pyrus
x bretschneideri]
Length = 128
Score = 57.4 bits (137), Expect = 8e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEIKRAQKAEREAS+LKGTM+KRM+FLDMD
Sbjct: 99 AEIKRAQKAEREASDLKGTMRKRMEFLDMD 128
>ref|XP_007135420.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
gi|561008465|gb|ESW07414.1| hypothetical protein
PHAVU_010G127900g [Phaseolus vulgaris]
Length = 128
Score = 57.4 bits (137), Expect = 8e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD D
Sbjct: 98 TAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>ref|XP_004303709.1| PREDICTED: sm-like protein LSM1B [Fragaria vesca subsp. vesca]
Length = 128
Score = 57.4 bits (137), Expect = 8e-07
Identities = 27/30 (90%), Positives = 30/30 (100%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEIKRAQKAEREAS+LKGTM+KRM+FLDMD
Sbjct: 99 AEIKRAQKAEREASDLKGTMRKRMEFLDMD 128
>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
gi|593266482|ref|XP_007135419.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
gi|951036571|ref|XP_014516654.1| PREDICTED: sm-like
protein LSM1B isoform X1 [Vigna radiata var. radiata]
gi|255628281|gb|ACU14485.1| unknown [Glycine max]
gi|561008464|gb|ESW07413.1| hypothetical protein
PHAVU_010G127800g [Phaseolus vulgaris]
gi|734313531|gb|KHN01428.1| U6 snRNA-associated Sm-like
protein LSm1 [Glycine soja] gi|734418459|gb|KHN39613.1|
U6 snRNA-associated Sm-like protein LSm1 [Glycine soja]
gi|947099143|gb|KRH47635.1| hypothetical protein
GLYMA_07G040900 [Glycine max]
Length = 128
Score = 57.4 bits (137), Expect = 8e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD D
Sbjct: 98 TAEIKRAQKAEREASDLKGTMRKRMEFLDFD 128
>ref|XP_010033722.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1
[Eucalyptus grandis] gi|629087164|gb|KCW53521.1|
hypothetical protein EUGRSUZ_J02801 [Eucalyptus grandis]
Length = 128
Score = 57.0 bits (136), Expect = 1e-06
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEI+RAQKAEREAS+LKGTM+KRM+FLD+D
Sbjct: 98 TAEIRRAQKAEREASDLKGTMRKRMEFLDLD 128
>gb|KYP50472.1| U6 snRNA-associated Sm-like protein LSm1 [Cajanus cajan]
Length = 128
Score = 56.6 bits (135), Expect = 2e-06
Identities = 26/31 (83%), Positives = 31/31 (100%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD++
Sbjct: 98 TAEIKRAQKAEREASDLKGTMRKRMEFLDLE 128
>ref|XP_012856715.1| PREDICTED: sm-like protein LSM1B [Erythranthe guttata]
gi|604301718|gb|EYU21304.1| hypothetical protein
MIMGU_mgv1a016277mg [Erythranthe guttata]
Length = 128
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = -2
Query: 441 EIKRAQKAEREASELKGTMKKRMDFLDMD 355
EIKRAQKAEREASELKGTMKK MDFLDMD
Sbjct: 100 EIKRAQKAEREASELKGTMKKWMDFLDMD 128
>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
vinifera] gi|147803430|emb|CAN62239.1| hypothetical
protein VITISV_033727 [Vitis vinifera]
gi|297742980|emb|CBI35847.3| unnamed protein product
[Vitis vinifera]
Length = 128
Score = 56.2 bits (134), Expect = 2e-06
Identities = 26/30 (86%), Positives = 30/30 (100%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEIKRAQKAEREAS+LKGTM+KRM+FLD+D
Sbjct: 99 AEIKRAQKAEREASDLKGTMRKRMEFLDLD 128
>dbj|BAT98277.1| hypothetical protein VIGAN_09192000 [Vigna angularis var.
angularis]
Length = 128
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD +
Sbjct: 98 TAEIKRAQKAEREASDLKGTMRKRMEFLDFE 128
>dbj|BAT98276.1| hypothetical protein VIGAN_09191900 [Vigna angularis var.
angularis]
Length = 128
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = -2
Query: 447 TAEIKRAQKAEREASELKGTMKKRMDFLDMD 355
TAEIKRAQKAEREAS+LKGTM+KRM+FLD +
Sbjct: 98 TAEIKRAQKAEREASDLKGTMRKRMEFLDFE 128
>gb|KDO64963.1| hypothetical protein CISIN_1g0321082mg [Citrus sinensis]
Length = 95
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/30 (83%), Positives = 30/30 (100%)
Frame = -2
Query: 444 AEIKRAQKAEREASELKGTMKKRMDFLDMD 355
AEIKRAQKAEREAS+LKG+M+KRM+FLD+D
Sbjct: 66 AEIKRAQKAEREASDLKGSMRKRMEFLDLD 95