BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00005963
         (379 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092538.1| PREDICTED: RNA pseudouridine synthase 4, mit...   110   5e-26
ref|XP_012831077.1| PREDICTED: RNA pseudouridine synthase 4, mit...   102   1e-23
ref|XP_012831076.1| PREDICTED: RNA pseudouridine synthase 4, mit...   102   1e-23
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythra...   102   3e-23
ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mit...   102   3e-23
ref|XP_010647894.1| PREDICTED: RNA pseudouridine synthase 4, mit...   100   2e-22
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit...   100   3e-22
ref|XP_006346360.2| PREDICTED: RNA pseudouridine synthase 4, mit...    95   2e-20
gb|KVI01889.1| Pseudouridine synthase, catalytic domain-containi...    94   3e-20
ref|XP_009805028.1| PREDICTED: RNA pseudouridine synthase 4, mit...    94   3e-20
ref|XP_009805027.1| PREDICTED: RNA pseudouridine synthase 4, mit...    94   3e-20
ref|XP_004230733.2| PREDICTED: RNA pseudouridine synthase 4, mit...    94   4e-20
ref|XP_015063320.1| PREDICTED: RNA pseudouridine synthase 4, mit...    92   1e-19
ref|XP_009629273.1| PREDICTED: RNA pseudouridine synthase 4, mit...    91   2e-19
gb|KDO59820.1| hypothetical protein CISIN_1g023907mg [Citrus sin...    88   4e-19
ref|XP_009629272.1| PREDICTED: RNA pseudouridine synthase 4, mit...    91   5e-19
ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citr...    91   7e-19
gb|KDO59819.1| hypothetical protein CISIN_1g023907mg [Citrus sin...    88   9e-19
ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mit...    88   9e-19
ref|XP_012075891.1| PREDICTED: RNA pseudouridine synthase 4, mit...    90   9e-19

>ref|XP_011092538.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Sesamum
           indicum]
          Length = 454

 Score =  110 bits (274), Expect = 5e-26
 Identities = 58/95 (61%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           HK+LG     ASDL+  +K+++V+H+ +G + E GSISDKQ  LHLHCK+MILPNISLAL
Sbjct: 360 HKRLGSRLVYASDLRWHNKISEVQHDTVGFDSEIGSISDKQLRLHLHCKEMILPNISLAL 419

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           Q    ISD      ESI++ APLPAHMQRSWDLLN
Sbjct: 420 QHRNGISDLDTAATESIKLVAPLPAHMQRSWDLLN 454


>ref|XP_012831077.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X3
           [Erythranthe guttata]
          Length = 364

 Score =  102 bits (254), Expect = 1e-23
 Identities = 54/95 (56%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           HKKLG + DS SD K  D++++VK++   LELE+GSISDKQ  LHLHCK+M LP+I+ AL
Sbjct: 270 HKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDKQFRLHLHCKEMSLPDITQAL 329

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           +   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 330 KYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 364


>ref|XP_012831076.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Erythranthe guttata]
          Length = 372

 Score =  102 bits (254), Expect = 1e-23
 Identities = 54/95 (56%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           HKKLG + DS SD K  D++++VK++   LELE+GSISDKQ  LHLHCK+M LP+I+ AL
Sbjct: 278 HKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDKQFRLHLHCKEMSLPDITQAL 337

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           +   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 338 KYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 372


>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythranthe guttata]
          Length = 457

 Score =  102 bits (254), Expect = 3e-23
 Identities = 54/95 (56%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           HKKLG + DS SD K  D++++VK++   LELE+GSISDKQ  LHLHCK+M LP+I+ AL
Sbjct: 363 HKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDKQFRLHLHCKEMSLPDITQAL 422

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           +   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 423 KYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 457


>ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Erythranthe guttata]
          Length = 461

 Score =  102 bits (254), Expect = 3e-23
 Identities = 54/95 (56%), Positives = 71/95 (74%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           HKKLG + DS SD K  D++++VK++   LELE+GSISDKQ  LHLHCK+M LP+I+ AL
Sbjct: 367 HKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDKQFRLHLHCKEMSLPDITQAL 426

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           +   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 427 KYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 461


>ref|XP_010647894.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Vitis vinifera]
          Length = 430

 Score = 99.8 bits (247), Expect = 2e-22
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+K  Q F S  +   D+ ++  K +  GL+LE+GSI DKQP LHLHCK+M+LPN+SLAL
Sbjct: 335 HRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLAL 394

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           Q  ++ ++    ++ES+   APLP+HMQRSWD+LN
Sbjct: 395 QNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 429


>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Vitis vinifera] gi|296090438|emb|CBI40257.3| unnamed
           protein product [Vitis vinifera]
          Length = 476

 Score = 99.8 bits (247), Expect = 3e-22
 Identities = 48/95 (50%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+K  Q F S  +   D+ ++  K +  GL+LE+GSI DKQP LHLHCK+M+LPN+SLAL
Sbjct: 381 HRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILDKQPHLHLHCKQMVLPNVSLAL 440

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           Q  ++ ++    ++ES+   APLP+HMQRSWD+LN
Sbjct: 441 QNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 475


>ref|XP_006346360.2| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
           tuberosum]
          Length = 478

 Score = 94.7 bits (234), Expect = 2e-20
 Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL       S L    ++ + K +   L L NGSISDKQP LHLHCK+M+LPNISLAL
Sbjct: 383 HRKLKHLPLPTSVLNLGVQIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLAL 442

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           QR +++SD     +ESI++ APLP HMQ+SWD L+
Sbjct: 443 QRAQVVSDTDLVDVESIKLVAPLPFHMQKSWDCLS 477


>gb|KVI01889.1| Pseudouridine synthase, catalytic domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 466

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 5/95 (5%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           HKK  Q F  +S+L+   ++ + K    GL+LE+GSISDKQP LHLHCKKM+LP++S AL
Sbjct: 372 HKKWNQLF--SSNLEEKVEVCKRKSLPFGLDLESGSISDKQPNLHLHCKKMVLPDVSSAL 429

Query: 199 QRGRIISD-----QMESIRVDAPLPAHMQRSWDLL 110
           +R RI S       ++S++  APLP HMQRSWD+L
Sbjct: 430 ERARISSSDYDFGDIKSLKFAAPLPPHMQRSWDIL 464


>ref|XP_009805028.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Nicotiana sylvestris]
          Length = 481

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL     S S +    ++ + + +   L L NGSISDKQP LHLHCK+M+LPN SLAL
Sbjct: 386 HRKLKHLSSSTSIVNLGARILEQEADPFSLRLGNGSISDKQPHLHLHCKEMVLPNFSLAL 445

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           Q+ R++S      +ESI++ APLP+HMQ+SWD L+
Sbjct: 446 QQARVVSGADLVHVESIKLVAPLPSHMQKSWDCLS 480


>ref|XP_009805027.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Nicotiana sylvestris]
          Length = 496

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL     S S +    ++ + + +   L L NGSISDKQP LHLHCK+M+LPN SLAL
Sbjct: 401 HRKLKHLSSSTSIVNLGARILEQEADPFSLRLGNGSISDKQPHLHLHCKEMVLPNFSLAL 460

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           Q+ R++S      +ESI++ APLP+HMQ+SWD L+
Sbjct: 461 QQARVVSGADLVHVESIKLVAPLPSHMQKSWDCLS 495


>ref|XP_004230733.2| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
           lycopersicum]
          Length = 478

 Score = 94.0 bits (232), Expect = 4e-20
 Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL       S L    ++ + K +   L L NGSISDKQP LHLHCK+M+LPNISLAL
Sbjct: 383 HRKLKHLPLPTSVLNLVVEIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISLAL 442

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           QR +++SD     +ESI++ APLP HMQ+SWD L+
Sbjct: 443 QRAQVVSDADLVDVESIKLVAPLPFHMQKSWDCLS 477


>ref|XP_015063320.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Solanum
           pennellii]
          Length = 478

 Score = 92.4 bits (228), Expect = 1e-19
 Identities = 49/95 (51%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL       S L    ++ + K +   L L NGSISDKQP LHLHCK+M+LPNIS AL
Sbjct: 383 HRKLKHLPLPTSVLNLGVEIPRQKPDPFNLRLGNGSISDKQPHLHLHCKEMVLPNISQAL 442

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 107
           QR +++SD     +ESI++ APLP HMQ+SWD L+
Sbjct: 443 QRAQVVSDADLVDVESIKLVAPLPFHMQKSWDCLS 477


>ref|XP_009629273.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Nicotiana tomentosiformis]
          Length = 357

 Score = 90.9 bits (224), Expect = 2e-19
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL     S S +    ++ + + +   L L NGSISDKQP LHLHCK+M+LPNISLAL
Sbjct: 262 HRKLKHLSSSISTVNLGARIPEQEADPFSLCLGNGSISDKQPHLHLHCKEMVLPNISLAL 321

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLL 110
           Q+ R++S      +ESI++ A LP+HMQ+SWD L
Sbjct: 322 QQARVVSGADLIDVESIKLVAHLPSHMQKSWDCL 355


>gb|KDO59820.1| hypothetical protein CISIN_1g023907mg [Citrus sinensis]
          Length = 236

 Score = 88.2 bits (217), Expect = 4e-19
 Identities = 43/95 (45%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+K  Q+  S      ++++ + K    GL+LE+GSI +KQP LHLHCK+M LPN+S A+
Sbjct: 141 HRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQAI 200

Query: 199 QRGRIIS----DQMESIRVDAPLPAHMQRSWDLLN 107
           Q+ ++ S     ++E++++ APLP+HMQRSWD+LN
Sbjct: 201 QKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 235


>ref|XP_009629272.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Nicotiana tomentosiformis]
          Length = 464

 Score = 90.9 bits (224), Expect = 5e-19
 Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+KL     S S +    ++ + + +   L L NGSISDKQP LHLHCK+M+LPNISLAL
Sbjct: 369 HRKLKHLSSSISTVNLGARIPEQEADPFSLCLGNGSISDKQPHLHLHCKEMVLPNISLAL 428

Query: 199 QRGRIISD----QMESIRVDAPLPAHMQRSWDLL 110
           Q+ R++S      +ESI++ A LP+HMQ+SWD L
Sbjct: 429 QQARVVSGADLIDVESIKLVAHLPSHMQKSWDCL 462


>ref|XP_006422925.1| hypothetical protein CICLE_v10028283mg [Citrus clementina]
           gi|557524859|gb|ESR36165.1| hypothetical protein
           CICLE_v10028283mg [Citrus clementina]
          Length = 494

 Score = 90.5 bits (223), Expect = 7e-19
 Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+K  Q+  S  +   +D+  + K    GL+LE+GSI +KQP LHLHCK+M LPN+S A+
Sbjct: 399 HRKWKQFHPSDLNKDSNDETPKEKTLHFGLDLESGSILEKQPGLHLHCKEMTLPNVSQAI 458

Query: 199 QRGRIIS----DQMESIRVDAPLPAHMQRSWDLLN 107
           Q+ ++ S     ++ES+++ APLP+HMQRSWD+LN
Sbjct: 459 QKVQLSSGCDVSKLESLKLVAPLPSHMQRSWDVLN 493


>gb|KDO59819.1| hypothetical protein CISIN_1g023907mg [Citrus sinensis]
          Length = 275

 Score = 88.2 bits (217), Expect = 9e-19
 Identities = 43/95 (45%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+K  Q+  S      ++++ + K    GL+LE+GSI +KQP LHLHCK+M LPN+S A+
Sbjct: 180 HRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQAI 239

Query: 199 QRGRIIS----DQMESIRVDAPLPAHMQRSWDLLN 107
           Q+ ++ S     ++E++++ APLP+HMQRSWD+LN
Sbjct: 240 QKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 274


>ref|XP_006487001.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Citrus sinensis]
          Length = 275

 Score = 88.2 bits (217), Expect = 9e-19
 Identities = 43/95 (45%), Positives = 67/95 (70%), Gaps = 4/95 (4%)
 Frame = -1

Query: 379 HKKLGQYFDSASDLKRDDKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLAL 200
           H+K  Q+  S      ++++ + K    GL+LE+GSI +KQP LHLHCK+M LPN+S A+
Sbjct: 180 HRKWKQFHPSDLSKDSNEEIPKEKTLHFGLDLESGSILEKQPRLHLHCKEMTLPNVSQAI 239

Query: 199 QRGRIIS----DQMESIRVDAPLPAHMQRSWDLLN 107
           Q+ ++ S     ++E++++ APLP+HMQRSWD+LN
Sbjct: 240 QKVQLSSGCDVSKLETLKLVAPLPSHMQRSWDVLN 274


>ref|XP_012075891.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Jatropha
           curcas] gi|802540331|ref|XP_012075896.1| PREDICTED: RNA
           pseudouridine synthase 4, mitochondrial [Jatropha
           curcas] gi|802540333|ref|XP_012075899.1| PREDICTED: RNA
           pseudouridine synthase 4, mitochondrial [Jatropha
           curcas] gi|802540335|ref|XP_012075905.1| PREDICTED: RNA
           pseudouridine synthase 4, mitochondrial [Jatropha
           curcas] gi|643740231|gb|KDP45903.1| hypothetical protein
           JCGZ_15463 [Jatropha curcas]
          Length = 470

 Score = 90.1 bits (222), Expect = 9e-19
 Identities = 46/86 (53%), Positives = 64/86 (74%), Gaps = 6/86 (6%)
 Frame = -1

Query: 346 SDLKRD--DKMTQVKHNIIGLELENGSISDKQPFLHLHCKKMILPNISLALQRGRIISD- 176
           SDL++   DK+   K   +G++ E+GSIS+KQP LHLHCK+M+LPN+S ALQ  +I  D 
Sbjct: 381 SDLEKTLHDKVPCEKMLPLGIDFESGSISEKQPRLHLHCKQMVLPNVSQALQDAKISPDY 440

Query: 175 ---QMESIRVDAPLPAHMQRSWDLLN 107
               ME+I +DAPLP++MQRSWD+L+
Sbjct: 441 NFSDMETIELDAPLPSYMQRSWDILS 466