BLASTX nr result

ID: Rehmannia27_contig00005920 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00005920
         (1253 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007019249.1| Uncharacterized protein TCM_035241 [Theobrom...    49   5e-07
ref|XP_007009514.1| Uncharacterized protein TCM_042921 [Theobrom...    42   2e-06

>ref|XP_007019249.1| Uncharacterized protein TCM_035241 [Theobroma cacao]
           gi|508724577|gb|EOY16474.1| Uncharacterized protein
           TCM_035241 [Theobroma cacao]
          Length = 440

 Score = 48.9 bits (115), Expect(2) = 5e-07
 Identities = 26/69 (37%), Positives = 42/69 (60%)
 Frame = +1

Query: 7   MDELRNDFIEGIFRESPEDSLRVAKLLMAYFLLFGWDGGKTVIETWAWTLIEDTDQWESF 186
           +DEL + F EG F+  P D+ R+A +L+A  +LF  +  + V   W  +L+ED D W +F
Sbjct: 73  LDELLDTFREGNFQR-PSDATRMAFVLIAKNILFDQEYRRRVTP-WLLSLVEDIDAWNAF 130

Query: 187 IWGKYSYQI 213
            WG Y +++
Sbjct: 131 PWGHYVWRL 139



 Score = 34.3 bits (77), Expect(2) = 5e-07
 Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
 Frame = +2

Query: 266 YHFYRFVWIFLV------WAYEAIPSLGTVCGIPAFHGAIPRCLRWR-------FLKVSI 406
           Y+ Y F W   V      WA EAI +   +    A     PR  RW+       F K   
Sbjct: 163 YNMYGFAWSDNVTFDSQFWAMEAISAFQKIVTPYAPKDVYPRMCRWQCNQKPKGFYKTVE 222

Query: 407 NMEGLLSRQMEVYAMLEPSAKEQMQPFWEHIHDVLSSGVIYI 532
            +E   S Q+ V   LEP+  E ++ ++  I   LS G  Y+
Sbjct: 223 QLES--SEQLWVVKTLEPTPDEAIREYFMDIDVPLSEGHQYL 262


>ref|XP_007009514.1| Uncharacterized protein TCM_042921 [Theobroma cacao]
           gi|508726427|gb|EOY18324.1| Uncharacterized protein
           TCM_042921 [Theobroma cacao]
          Length = 715

 Score = 42.4 bits (98), Expect(2) = 2e-06
 Identities = 23/73 (31%), Positives = 40/73 (54%)
 Frame = +1

Query: 1   LKMDELRNDFIEGIFRESPEDSLRVAKLLMAYFLLFGWDGGKTVIETWAWTLIEDTDQWE 180
           +K+  L + F    F+  P D+ ++A +L+A  +LFG    +  +  W  +L+ED D W 
Sbjct: 58  VKLQALLDTFRRSNFKR-PRDATKMAFVLIANNILFG-QYYRIRVTPWLLSLVEDIDAWN 115

Query: 181 SFIWGKYSYQILL 219
            F WG Y +++ L
Sbjct: 116 VFPWGHYVWKLTL 128



 Score = 38.9 bits (89), Expect(2) = 2e-06
 Identities = 29/97 (29%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
 Frame = +2

Query: 266 YHFYRFVWIFLVWAYEAIPSL-GTVCGIPAFHGAIPRCLRW-------RFLKVSINMEGL 421
           Y+ Y F W+   WA EAIP+    V          PR  RW        F K    +E  
Sbjct: 150 YNIYGFAWVIQFWAMEAIPAFQKIVAPFGPKDNVHPRMCRWDCNQKPKDFYKTIQKLES- 208

Query: 422 LSRQMEVYAMLEPSAKEQMQPFWEHIHDVLSSGVIYI 532
            S Q+     LEP+A + ++ ++  I   LS G  Y+
Sbjct: 209 -SDQLWALETLEPTADKALREYFVDIDVPLSEGNEYV 244


Top