BLASTX nr result

ID: Rehmannia27_contig00004908 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00004908
         (792 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009791954.1| PREDICTED: uncharacterized protein LOC104239...    44   2e-07
ref|XP_009757982.1| PREDICTED: uncharacterized protein LOC104210...    44   3e-07
ref|XP_009795976.1| PREDICTED: uncharacterized protein LOC104242...    45   2e-06
ref|XP_009795977.1| PREDICTED: uncharacterized protein LOC104242...    45   2e-06

>ref|XP_009791954.1| PREDICTED: uncharacterized protein LOC104239118 [Nicotiana
           sylvestris] gi|698491032|ref|XP_009791955.1| PREDICTED:
           uncharacterized protein LOC104239118 [Nicotiana
           sylvestris] gi|698491034|ref|XP_009791957.1| PREDICTED:
           uncharacterized protein LOC104239118 [Nicotiana
           sylvestris] gi|698491037|ref|XP_009791958.1| PREDICTED:
           uncharacterized protein LOC104239118 [Nicotiana
           sylvestris] gi|698491039|ref|XP_009791959.1| PREDICTED:
           uncharacterized protein LOC104239118 [Nicotiana
           sylvestris] gi|698491041|ref|XP_009791960.1| PREDICTED:
           uncharacterized protein LOC104239118 [Nicotiana
           sylvestris]
          Length = 299

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 29/102 (28%), Positives = 45/102 (44%)
 Frame = +2

Query: 242 LADVIGRVVSMQSAQNKEFGGKVTRFIELSXXXXXXXXXXXXL*CLLYYNLTKISQIYCS 421
           L DVIG +VS +  Q+ +    +  F+ +                          +I   
Sbjct: 93  LFDVIGEIVSYEDLQSIKQDDSIRMFMNI--------------------------EIQDY 126

Query: 422 RNNRISCTLWEDYVDLILKHLETQNLEPIIIILRMCRAKVYR 547
            +N IS TLW D+V+ I  HL   N +PI+I +++ RA  YR
Sbjct: 127 ESNNISATLWGDFVEQIKLHLNGSNDKPIVIFMQLIRAHRYR 168



 Score = 38.9 bits (89), Expect(2) = 2e-07
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = +1

Query: 4   KYKATTTKHKIFFHGRTNVFEMFDSSFQRFMFNFKNFSELSNIDAIDETLLF 159
           K K    K K+ F  +T V E+ D  F   +F FK + +LSN    D T LF
Sbjct: 43  KLKTKDHKFKLMFTHKTTVEEIHDPHFNMCIFKFKTYEQLSNPQEFDNTELF 94


>ref|XP_009757982.1| PREDICTED: uncharacterized protein LOC104210719 [Nicotiana
           sylvestris]
          Length = 247

 Score = 43.9 bits (102), Expect(2) = 3e-07
 Identities = 28/102 (27%), Positives = 46/102 (45%)
 Frame = +2

Query: 242 LADVIGRVVSMQSAQNKEFGGKVTRFIELSXXXXXXXXXXXXL*CLLYYNLTKISQIYCS 421
           L DVIG VVS +  Q+ +    +  ++ +                          QI   
Sbjct: 141 LFDVIGEVVSYEDVQSIKQDDNIRMYMNI--------------------------QIQDY 174

Query: 422 RNNRISCTLWEDYVDLILKHLETQNLEPIIIILRMCRAKVYR 547
            +N IS TLW D+V+ I  +L   N +P+++I+++ RA  YR
Sbjct: 175 ESNNISATLWGDFVEQIRPYLNGSNDKPVVVIMQLIRAHRYR 216



 Score = 38.9 bits (89), Expect(2) = 3e-07
 Identities = 20/52 (38%), Positives = 26/52 (50%)
 Frame = +1

Query: 4   KYKATTTKHKIFFHGRTNVFEMFDSSFQRFMFNFKNFSELSNIDAIDETLLF 159
           K K    K K+ F  +T V EM D  F   +F F+ + +LSN    D T LF
Sbjct: 91  KLKTKDHKLKLMFTHKTTVDEMHDPQFNMCIFKFRTYEQLSNPQEFDNTELF 142


>ref|XP_009795976.1| PREDICTED: uncharacterized protein LOC104242600 isoform X1
           [Nicotiana sylvestris]
          Length = 213

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 30/102 (29%), Positives = 46/102 (45%)
 Frame = +2

Query: 242 LADVIGRVVSMQSAQNKEFGGKVTRFIELSXXXXXXXXXXXXL*CLLYYNLTKISQIYCS 421
           L DVIG +VS +  Q+ +    +  F+ +                          Q Y S
Sbjct: 52  LFDVIGEIVSYEDVQSIKQDDSIRMFMNIEI------------------------QDYVS 87

Query: 422 RNNRISCTLWEDYVDLILKHLETQNLEPIIIILRMCRAKVYR 547
            N  IS TLW D+V+ I  HL   N +P++I++++ RA  YR
Sbjct: 88  NN--ISATLWGDFVEQIKPHLNGSNDKPVVIVMQLIRAHRYR 127



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 4   KYKATTTKHKIFFHGRTNVFEMFDSSFQRFMFNFKNFSELSNIDAIDETLLF 159
           K K    K K+    ++ + E+ D  F   +F FK + +LSN    D T LF
Sbjct: 2   KLKTKDHKFKLMLTYKSTIEEIHDPHFNMCIFKFKTYEQLSNPQEFDNTELF 53


>ref|XP_009795977.1| PREDICTED: uncharacterized protein LOC104242600 isoform X2
           [Nicotiana sylvestris]
          Length = 206

 Score = 45.4 bits (106), Expect(2) = 2e-06
 Identities = 30/102 (29%), Positives = 46/102 (45%)
 Frame = +2

Query: 242 LADVIGRVVSMQSAQNKEFGGKVTRFIELSXXXXXXXXXXXXL*CLLYYNLTKISQIYCS 421
           L DVIG +VS +  Q+ +    +  F+ +                          Q Y S
Sbjct: 52  LFDVIGEIVSYEDVQSIKQDDSIRMFMNIEI------------------------QDYVS 87

Query: 422 RNNRISCTLWEDYVDLILKHLETQNLEPIIIILRMCRAKVYR 547
            N  IS TLW D+V+ I  HL   N +P++I++++ RA  YR
Sbjct: 88  NN--ISATLWGDFVEQIKPHLNGSNDKPVVIVMQLIRAHRYR 127



 Score = 34.3 bits (77), Expect(2) = 2e-06
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 4   KYKATTTKHKIFFHGRTNVFEMFDSSFQRFMFNFKNFSELSNIDAIDETLLF 159
           K K    K K+    ++ + E+ D  F   +F FK + +LSN    D T LF
Sbjct: 2   KLKTKDHKFKLMLTYKSTIEEIHDPHFNMCIFKFKTYEQLSNPQEFDNTELF 53


Top