BLASTX nr result
ID: Rehmannia27_contig00004807
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00004807
(553 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposo... 89 4e-19
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera] 93 9e-19
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 92 2e-18
gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irr... 85 2e-18
emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana] 92 2e-18
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera] 90 8e-18
emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera] 89 9e-18
emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera] 83 1e-17
gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposo... 88 1e-17
emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera] 89 2e-17
emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera] 87 1e-16
emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera] 87 1e-16
ref|XP_010096588.1| hypothetical protein L484_025334 [Morus nota... 87 1e-16
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 87 1e-16
emb|CDY03436.1| BnaC01g16460D [Brassica napus] 82 2e-16
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 86 2e-16
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 86 3e-16
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 84 4e-16
gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa] 84 5e-16
ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455... 82 5e-16
>gb|KYP48030.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 194
Score = 89.4 bits (220), Expect = 4e-19
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = +3
Query: 18 VFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKCLP 197
++ D+QS I L KN V H+RTKH+DV+FH++RD+VA +V +EK+ +E N ADM TK LP
Sbjct: 118 IYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAADMLTKALP 177
Query: 198 VSKFLTCLKILN 233
+KF CLK+LN
Sbjct: 178 SNKFEFCLKLLN 189
>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
Length = 777
Score = 92.8 bits (229), Expect = 9e-19
Identities = 43/73 (58%), Positives = 53/73 (72%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
V +F DSQS IQLC NP FH RTKHIDVR+H+IR+ ++ G + LEKI NPADM TK
Sbjct: 695 VEIFLDSQSAIQLCNNPXFHXRTKHIDVRYHFIRETISSGAMKLEKISXVDNPADMATKV 754
Query: 192 LPVSKFLTCLKIL 230
LPV+KF L ++
Sbjct: 755 LPVTKFKYSLDLV 767
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 92.0 bits (227), Expect = 2e-18
Identities = 40/76 (52%), Positives = 57/76 (75%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
V +F DSQS I+LCKN +FH+RTKH+DVR+H+IR+ V+ G + LEKI + NPA+M TK
Sbjct: 726 VEIFSDSQSAIELCKNLMFHERTKHVDVRYHFIRETVSSGAMKLEKISTTDNPANMATKV 785
Query: 192 LPVSKFLTCLKILNFD 239
LP+ K+ CL ++ +
Sbjct: 786 LPIRKYRYCLDLVQVE 801
>gb|EXX70798.1| hypothetical protein RirG_084260 [Rhizophagus irregularis DAOM
197198w]
Length = 103
Score = 85.1 bits (209), Expect = 2e-18
Identities = 37/71 (52%), Positives = 54/71 (76%)
Frame = +3
Query: 18 VFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKCLP 197
+F DSQS I L K+ +FH+RTKHIDVR+H+IRD+++KG + ++KI + NPADM TK +P
Sbjct: 29 IFCDSQSAIYLTKDQMFHERTKHIDVRYHFIRDVISKGDIQVQKISTHDNPADMMTKPVP 88
Query: 198 VSKFLTCLKIL 230
+KF C ++
Sbjct: 89 ATKFELCSSLV 99
>emb|CAB75481.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1363
Score = 91.7 bits (226), Expect = 2e-18
Identities = 45/74 (60%), Positives = 55/74 (74%)
Frame = +3
Query: 9 NVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTK 188
NV +F DSQS I L KN V H+RTKHIDV+FH+IR+I+A G V + KI +E NPAD+ TK
Sbjct: 1285 NVEIFCDSQSAIALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTK 1344
Query: 189 CLPVSKFLTCLKIL 230
LPV+KF T L L
Sbjct: 1345 VLPVNKFQTALDFL 1358
>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
Length = 939
Score = 90.1 bits (222), Expect = 8e-18
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 9 NVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTK 188
+V VF DSQS + L KN FH+RTKHIDVRFH+IRDI +GLVN+ KI ++ NPADM TK
Sbjct: 861 SVTVFCDSQSALCLTKNQGFHERTKHIDVRFHFIRDIAEQGLVNVSKISTKDNPADMLTK 920
Query: 189 CLPVSKFLTCLKILN 233
+ KF CL ++N
Sbjct: 921 PISKVKFKQCLNLIN 935
>emb|CAN65981.1| hypothetical protein VITISV_017970 [Vitis vinifera]
Length = 421
Score = 89.4 bits (220), Expect = 9e-18
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
V +F +SQS IQLCKN VFH+RTKH+DVR+H+IR+IV+ G V LEKI + N ADM TK
Sbjct: 354 VEIFLNSQSAIQLCKNLVFHERTKHVDVRYHFIREIVSLGAVKLEKISTTDNSADMATKV 413
Query: 192 LPVSKF 209
L VSKF
Sbjct: 414 LLVSKF 419
>emb|CAN72239.1| hypothetical protein VITISV_010776 [Vitis vinifera]
Length = 104
Score = 83.2 bits (204), Expect = 1e-17
Identities = 40/74 (54%), Positives = 52/74 (70%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
VVV+ D+QS I L KN FH+R KHIDVR H++RDI+ G + + KI E NP+DM TK
Sbjct: 27 VVVYCDNQSAIHLAKNQSFHERFKHIDVRLHFVRDIIIAGKIGVGKIHIEDNPSDMLTKS 86
Query: 192 LPVSKFLTCLKILN 233
L V+KF CL ++N
Sbjct: 87 LNVTKFNHCLNLVN 100
>gb|KYP63307.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 322
Score = 87.8 bits (216), Expect = 1e-17
Identities = 39/72 (54%), Positives = 54/72 (75%)
Frame = +3
Query: 18 VFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKCLP 197
++ D+QS I L KN V H+RTKH+DV+FH++RD+VA +V +EK+ +E N DM TK LP
Sbjct: 246 IYCDNQSAICLTKNQVHHERTKHVDVKFHFVRDVVASDVVKIEKVATEENAVDMLTKALP 305
Query: 198 VSKFLTCLKILN 233
+KF CLK+LN
Sbjct: 306 SNKFEFCLKLLN 317
>emb|CAN67902.1| hypothetical protein VITISV_037907 [Vitis vinifera]
Length = 735
Score = 89.0 bits (219), Expect = 2e-17
Identities = 40/74 (54%), Positives = 56/74 (75%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
VVV+ D+QS I L KN FH+R+KHIDVR H++RDI+A G + + K+P++ NP+DM TK
Sbjct: 658 VVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAVGEIGVGKVPTKDNPSDMLTKS 717
Query: 192 LPVSKFLTCLKILN 233
L V+KF CL ++N
Sbjct: 718 LNVTKFKHCLNLIN 731
>emb|CAN60263.1| hypothetical protein VITISV_026496 [Vitis vinifera]
Length = 1842
Score = 87.0 bits (214), Expect = 1e-16
Identities = 42/73 (57%), Positives = 53/73 (72%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
V +F DSQS IQLCKN VFH+RTKH++VR+H+IR+IV+ + LEKI NP DM TK
Sbjct: 1770 VEIFSDSQSTIQLCKNXVFHERTKHVNVRYHFIREIVSSRKMKLEKISLADNPIDMATKV 1829
Query: 192 LPVSKFLTCLKIL 230
LPV KF L ++
Sbjct: 1830 LPVRKFXYYLDLV 1842
>emb|CAN77659.1| hypothetical protein VITISV_030914 [Vitis vinifera]
Length = 626
Score = 86.7 bits (213), Expect = 1e-16
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = +3
Query: 6 DNVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 185
+ V VF D+QS I L +NP+FH+R+KHIDV+ H+IR+ ++ G V +KI +E NP D T
Sbjct: 537 ETVTVFCDNQSAIYLVRNPMFHERSKHIDVKLHFIREXISSGAVKFDKIATEENPTDALT 596
Query: 186 KCLPVSKFLTCLKIL 230
K LPV+KF CL ++
Sbjct: 597 KSLPVAKFELCLNLI 611
>ref|XP_010096588.1| hypothetical protein L484_025334 [Morus notabilis]
gi|587876164|gb|EXB65256.1| hypothetical protein
L484_025334 [Morus notabilis]
Length = 987
Score = 86.7 bits (213), Expect = 1e-16
Identities = 36/60 (60%), Positives = 48/60 (80%)
Frame = +3
Query: 9 NVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTK 188
N ++ DSQS I LCKNP++HD+TKHIDVR H+IR+ V +G++ LEKI +E NP+DM TK
Sbjct: 166 NTTIYLDSQSAIHLCKNPIYHDKTKHIDVRHHFIREKVEEGIIKLEKIDTEDNPSDMATK 225
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 86.7 bits (213), Expect = 1e-16
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = +3
Query: 6 DNVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 185
D V ++ DSQS I L KN V+H+RTKHIDVRF+YIRD+V G V++ KI + NP D T
Sbjct: 1276 DKVKIWCDSQSAICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALT 1335
Query: 186 KCLPVSKFLTCLKIL 230
KC+PV+KF + L +L
Sbjct: 1336 KCIPVNKFKSALGVL 1350
>emb|CDY03436.1| BnaC01g16460D [Brassica napus]
Length = 187
Score = 82.0 bits (201), Expect = 2e-16
Identities = 40/76 (52%), Positives = 54/76 (71%)
Frame = +3
Query: 6 DNVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 185
D++ + DSQS I L KN V H+RTKH+D +F++IRDIVAK +V+L KI + NP+D T
Sbjct: 111 DSLRIDCDSQSAIALSKNAVHHERTKHMDTQFNFIRDIVAKRIVSLAKIHTSKNPSDFLT 170
Query: 186 KCLPVSKFLTCLKILN 233
KC+P +KF C LN
Sbjct: 171 KCVPGTKFQLCCDSLN 186
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 85.9 bits (211), Expect = 2e-16
Identities = 39/74 (52%), Positives = 55/74 (74%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
VVV+ D+QS I L KN FH+R+KHIDVR H++RDI+A G + + K+ ++ NP+DM TK
Sbjct: 1131 VVVYCDNQSAIHLAKNQSFHERSKHIDVRLHFVRDIIAAGEIGVGKVHTKDNPSDMLTKS 1190
Query: 192 LPVSKFLTCLKILN 233
L V+KF CL ++N
Sbjct: 1191 LNVTKFKHCLNLIN 1204
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 85.5 bits (210), Expect = 3e-16
Identities = 42/73 (57%), Positives = 54/73 (73%)
Frame = +3
Query: 12 VVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGTKC 191
V + DSQS I L KN V+H+RTKHIDV++H+IRD+V G V + KI +E NPAD+ TK
Sbjct: 1060 VNIHCDSQSAIALAKNAVYHERTKHIDVKYHFIRDLVNNGEVQVLKIDTEDNPADIFTKV 1119
Query: 192 LPVSKFLTCLKIL 230
LPVSKF L++L
Sbjct: 1120 LPVSKFQDALELL 1132
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 83.6 bits (205), Expect = 4e-16
Identities = 38/76 (50%), Positives = 56/76 (73%)
Frame = +3
Query: 3 DDNVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMG 182
D + +F DSQS I L K+ +FH+RTKHID+++HY+RD+VA+G + + KI + NPADM
Sbjct: 214 DSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDVVAQGKLKVCKISTHDNPADMM 273
Query: 183 TKCLPVSKFLTCLKIL 230
TK +PV+KF C ++
Sbjct: 274 TKPVPVAKFELCSSLV 289
>gb|ABG37666.1| CCHC-type integrase [Populus trichocarpa]
Length = 353
Score = 84.0 bits (206), Expect = 5e-16
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +3
Query: 6 DNVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 185
++V V DSQS I L KN V H RTKHIDVRFH++R+IV +G + L+KI + NPADM T
Sbjct: 25 EHVDVHCDSQSAICLAKNQVHHSRTKHIDVRFHFVREIVDEGDILLQKIGTADNPADMLT 84
Query: 186 KCLPVSKFLTCLKILNFDTHD 248
KC+ KF CL + +TH+
Sbjct: 85 KCVSGIKFQHCLDLQWAETHE 105
>ref|XP_008393076.1| PREDICTED: uncharacterized protein LOC103455257 [Malus domestica]
Length = 253
Score = 82.4 bits (202), Expect = 5e-16
Identities = 41/77 (53%), Positives = 54/77 (70%)
Frame = +3
Query: 6 DNVVVFFDSQSGIQLCKNPVFHDRTKHIDVRFHYIRDIVAKGLVNLEKIPSEFNPADMGT 185
D+V V DSQS I L KN V H RTKHIDVRFH++R+I+ G + L+KI + NPADM T
Sbjct: 173 DHVNVHCDSQSAIHLAKNQVHHARTKHIDVRFHFVREIIDDGDILLQKIETADNPADMLT 232
Query: 186 KCLPVSKFLTCLKILNF 236
K + + KF CL +++F
Sbjct: 233 KPVSLHKFKHCLDLIDF 249