BLASTX nr result

ID: Rehmannia27_contig00004784 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00004784
         (1373 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012847188.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
ref|XP_011093449.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-12
ref|XP_012847088.1| PREDICTED: early nodulin-93-like [Erythranth...    64   4e-09
ref|XP_011081738.1| PREDICTED: early nodulin-93-like isoform X2 ...    62   4e-08
ref|XP_011081737.1| PREDICTED: uncharacterized protein LOC105164...    62   6e-08

>ref|XP_012847188.1| PREDICTED: pentatricopeptide repeat-containing protein At4g17616
            [Erythranthe guttata]
          Length = 683

 Score =  107 bits (267), Expect = 2e-21
 Identities = 57/94 (60%), Positives = 70/94 (74%), Gaps = 2/94 (2%)
 Frame = +3

Query: 1098 ISMLRSLIRQNQRGFLRLILGEKFAFIHNVCCQNLNRCNNPC--GNSFSEDFSTISEQLE 1271
            +S L+SLIR NQ GFLRLI G +    HNV  Q LN CN+     + FSE+FSTI+E+LE
Sbjct: 1    MSKLQSLIRCNQNGFLRLIFGGRNVCSHNVSFQQLNSCNDNRLHRSRFSEEFSTIAEKLE 60

Query: 1272 KLCSKGPSRWILTEKLERALKEHQMDEALETYED 1373
            KL SK P +WIL EKLE+ALKEHQ+DEA +TY+D
Sbjct: 61   KLSSKKPPQWILLEKLEKALKEHQLDEAWKTYQD 94


>ref|XP_011093449.1| PREDICTED: pentatricopeptide repeat-containing protein At4g17616
            [Sesamum indicum] gi|747040687|ref|XP_011093529.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g17616 [Sesamum indicum]
            gi|747040689|ref|XP_011093613.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g17616
            [Sesamum indicum] gi|747040691|ref|XP_011093687.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g17616 [Sesamum indicum]
            gi|747040693|ref|XP_011093767.1| PREDICTED:
            pentatricopeptide repeat-containing protein At4g17616
            [Sesamum indicum] gi|747040695|ref|XP_011093841.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g17616 [Sesamum indicum]
          Length = 690

 Score = 80.5 bits (197), Expect = 1e-12
 Identities = 47/90 (52%), Positives = 55/90 (61%)
 Frame = +3

Query: 1104 MLRSLIRQNQRGFLRLILGEKFAFIHNVCCQNLNRCNNPCGNSFSEDFSTISEQLEKLCS 1283
            M+ SL+R++QRGFL LI G      H    Q LNR N P    F + FS I  + E L  
Sbjct: 1    MVGSLVRESQRGFLGLIFG------HTKSSQQLNRYNKPYRTCFLQGFSAIGGKRENLYW 54

Query: 1284 KGPSRWILTEKLERALKEHQMDEALETYED 1373
            KG SR IL  KLE ALKEHQ+DEA ETY+D
Sbjct: 55   KGASRSILLGKLESALKEHQVDEAWETYKD 84


>ref|XP_012847088.1| PREDICTED: early nodulin-93-like [Erythranthe guttata]
          Length = 110

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 30/39 (76%), Positives = 31/39 (79%)
 Frame = -3

Query: 570 MGFPSEMRDLFANYKKPFLIGSPFEDEKIRRSKQCTQEG 454
           MG PSEMRDLFAN  K  +I SP EDEKI RSKQCTQEG
Sbjct: 1   MGIPSEMRDLFANRNKSLMIASPIEDEKILRSKQCTQEG 39


>ref|XP_011081738.1| PREDICTED: early nodulin-93-like isoform X2 [Sesamum indicum]
          Length = 149

 Score = 62.0 bits (149), Expect = 4e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -3

Query: 573 RMGFPSEMRDLFANYKKPFLIGSPFEDEKIRRSKQCTQEG 454
           +MG PSEMRDLFAN KK  +I SP EDEK+ R++QCTQEG
Sbjct: 39  KMGIPSEMRDLFANRKKALVIPSPMEDEKMLRTRQCTQEG 78


>ref|XP_011081737.1| PREDICTED: uncharacterized protein LOC105164713 isoform X1 [Sesamum
           indicum]
          Length = 162

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -3

Query: 573 RMGFPSEMRDLFANYKKPFLIGSPFEDEKIRRSKQCTQEG 454
           +MG PSEMRDLFAN KK  +I SP EDEK+ R++QCTQEG
Sbjct: 39  KMGIPSEMRDLFANRKKALVIPSPMEDEKMLRTRQCTQEG 78


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