BLASTX nr result
ID: Rehmannia27_contig00004752
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00004752
(557 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094245.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 110 3e-26
ref|XP_012828754.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 106 1e-24
gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlise... 70 1e-11
emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum] 69 8e-11
ref|XP_009763024.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 69 1e-10
ref|XP_009589241.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 69 1e-10
ref|XP_013450228.1| 33 kDa ribonucleoprotein [Medicago truncatul... 67 7e-10
ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 66 9e-10
ref|XP_010058980.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 66 1e-09
ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 65 2e-09
ref|XP_015062494.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 65 2e-09
ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 64 6e-09
ref|XP_007028003.1| Chloroplast RNA-binding protein 33 [Theobrom... 64 6e-09
ref|XP_015900425.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 64 8e-09
gb|AFK49291.1| unknown [Lotus japonicus] 61 1e-08
ref|XP_015946282.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 63 1e-08
gb|KMZ70246.1| RNA-binding protein [Zostera marina] 63 1e-08
ref|XP_007162982.1| hypothetical protein PHAVU_001G196700g [Phas... 62 2e-08
ref|XP_008442930.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 62 2e-08
ref|XP_008442929.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 62 2e-08
>ref|XP_011094245.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Sesamum
indicum]
Length = 320
Score = 110 bits (276), Expect = 3e-26
Identities = 67/136 (49%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Frame = -3
Query: 405 IGTYSHNFSSNSI-DHLSLYLFPCKTNPIKTPSKLKTFLNYXXXXXXXXXXIYCASTAFX 229
IGT SH SS +I DHLSL+ FPCK NP+K+ SK++T L+Y IYC S+AF
Sbjct: 13 IGTSSHYLSSTTINDHLSLHFFPCKANPVKSLSKIRTCLSYSPFSFHSRSSIYCVSSAFD 72
Query: 228 XXXXXXXXXXXXXXESGVQXXXXXXXXXXXXXXVAQPATGGRLYVGNLPFSMTSAQLSEI 49
S + A+ GRLYVGNLPFSMTS+QLSEI
Sbjct: 73 SVELNQEEVEEELESSIQETVTEAEEEENGVSPSAE---AGRLYVGNLPFSMTSSQLSEI 129
Query: 48 FAEAGRVVSVEIVYDR 1
FAEAGRV SVEIVYDR
Sbjct: 130 FAEAGRVASVEIVYDR 145
>ref|XP_012828754.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Erythranthe
guttata] gi|604298017|gb|EYU18105.1| hypothetical
protein MIMGU_mgv1a009876mg [Erythranthe guttata]
Length = 328
Score = 106 bits (265), Expect = 1e-24
Identities = 73/139 (52%), Positives = 80/139 (57%), Gaps = 6/139 (4%)
Frame = -3
Query: 399 TYSHNFSSNSIDHLSLYLFP-CKTNPIKT-PSKLKTFLNYXXXXXXXXXXI-YCASTAFX 229
T SH+ SS S+DHLSL+LFP K NPIKT PSKLK+F N YCASTAF
Sbjct: 15 TSSHSLSSTSVDHLSLHLFPFSKANPIKTHPSKLKSFFNCSSFSSLCRSSSVYCASTAFD 74
Query: 228 XXXXXXXXXXXXXXES---GVQXXXXXXXXXXXXXXVAQPATGGRLYVGNLPFSMTSAQL 58
E + V+QP+ GRLY GNLPFSMTSAQL
Sbjct: 75 SVELNQEDVDDDDDEDEEEDIDEEETLSEIQDEGADVSQPS--GRLYAGNLPFSMTSAQL 132
Query: 57 SEIFAEAGRVVSVEIVYDR 1
SEIFAEAGRVVSVEIVYDR
Sbjct: 133 SEIFAEAGRVVSVEIVYDR 151
>gb|EPS68161.1| hypothetical protein M569_06611, partial [Genlisea aurea]
Length = 204
Score = 69.7 bits (169), Expect = 1e-11
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -3
Query: 120 PATGGRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
P+ GRLYVGNLPFS+TSAQLSEIF+EAG VVSVEIVYDR
Sbjct: 8 PSEAGRLYVGNLPFSITSAQLSEIFSEAGGVVSVEIVYDR 47
>emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 68.9 bits (167), Expect = 8e-11
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = -3
Query: 126 AQPATGGRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
++ GGRLYVGNLPFSMTS+QLSEIFAEAG V +VEIVYDR
Sbjct: 97 SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDR 138
>ref|XP_009763024.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
sylvestris] gi|311952|emb|CAA41253.1| 33 kd chloroplast
ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 68.9 bits (167), Expect = 1e-10
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = -3
Query: 126 AQPATGGRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
++ GGRLYVGNLPFSMTS+QLSEIFAEAG V +VEIVYDR
Sbjct: 103 SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDR 144
>ref|XP_009589241.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Nicotiana
tomentosiformis] gi|133249|sp|P19684.1|ROC5_NICSY
RecName: Full=33 kDa ribonucleoprotein, chloroplastic;
Flags: Precursor gi|100390|pir||S12111
ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product
[Nicotiana tabacum]
Length = 324
Score = 68.9 bits (167), Expect = 1e-10
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = -3
Query: 126 AQPATGGRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
++ GGRLYVGNLPFSMTS+QLSEIFAEAG V +VEIVYDR
Sbjct: 108 SESVEGGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDR 149
>ref|XP_013450228.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|657379977|gb|KEH24256.1| 33 kDa ribonucleoprotein
[Medicago truncatula]
Length = 318
Score = 66.6 bits (161), Expect = 7e-10
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLPFSMTS+QL++IFAEAG VVSVEIVYDR
Sbjct: 109 GRLYVGNLPFSMTSSQLADIFAEAGTVVSVEIVYDR 144
>ref|XP_004494258.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Cicer
arietinum]
Length = 318
Score = 66.2 bits (160), Expect = 9e-10
Identities = 32/36 (88%), Positives = 35/36 (97%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLPFS+TS+QL+EIFAEAG VVSVEIVYDR
Sbjct: 108 GRLYVGNLPFSITSSQLAEIFAEAGTVVSVEIVYDR 143
>ref|XP_010058980.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Eucalyptus
grandis] gi|629126012|gb|KCW90437.1| hypothetical
protein EUGRSUZ_A02571 [Eucalyptus grandis]
Length = 331
Score = 65.9 bits (159), Expect = 1e-09
Identities = 28/39 (71%), Positives = 37/39 (94%)
Frame = -3
Query: 117 ATGGRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
++GGRLYVGNLP+SM S+QL+E+F EAGRV++VE+VYDR
Sbjct: 121 SSGGRLYVGNLPYSMNSSQLAEVFEEAGRVINVEVVYDR 159
>ref|XP_004228672.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Solanum
lycopersicum]
Length = 328
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLPFSMT +QLSEIFAEAG+V +VEIVYDR
Sbjct: 126 GRLYVGNLPFSMTPSQLSEIFAEAGKVANVEIVYDR 161
>ref|XP_015062494.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
pennellii]
Length = 331
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLPFSMT +QLSEIFAEAG+V +VEIVYDR
Sbjct: 124 GRLYVGNLPFSMTPSQLSEIFAEAGKVANVEIVYDR 159
>ref|XP_006348449.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 329
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLPFSMT +QLSEIF EAG+V +VEIVYDR
Sbjct: 122 GRLYVGNLPFSMTPSQLSEIFTEAGKVANVEIVYDR 157
>ref|XP_007028003.1| Chloroplast RNA-binding protein 33 [Theobroma cacao]
gi|508716608|gb|EOY08505.1| Chloroplast RNA-binding
protein 33 [Theobroma cacao]
Length = 340
Score = 63.9 bits (154), Expect = 6e-09
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLP+SMTS++LSEIF EAGRV +VEIVYDR
Sbjct: 130 GRLYVGNLPYSMTSSELSEIFNEAGRVANVEIVYDR 165
>ref|XP_015900425.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Ziziphus
jujuba] gi|1009176690|ref|XP_015869567.1| PREDICTED: 33
kDa ribonucleoprotein, chloroplastic-like [Ziziphus
jujuba] gi|1009178460|ref|XP_015870538.1| PREDICTED: 33
kDa ribonucleoprotein, chloroplastic-like [Ziziphus
jujuba]
Length = 325
Score = 63.5 bits (153), Expect = 8e-09
Identities = 29/36 (80%), Positives = 34/36 (94%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLP+SMTS+QL+EIF EAG VV+VEI+YDR
Sbjct: 116 GRLYVGNLPYSMTSSQLAEIFGEAGSVVNVEIIYDR 151
>gb|AFK49291.1| unknown [Lotus japonicus]
Length = 162
Score = 61.2 bits (147), Expect = 1e-08
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = -3
Query: 105 RLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
RLYVGNLP+SMTS+QL+EIF EAG VVSVE++YDR
Sbjct: 112 RLYVGNLPYSMTSSQLTEIFVEAGTVVSVEVMYDR 146
>ref|XP_015946282.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Arachis
duranensis]
Length = 303
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLYVGNLP+SMTS +LSE+F EAG VVSVE+VYDR
Sbjct: 100 GRLYVGNLPYSMTSNELSELFGEAGTVVSVEVVYDR 135
>gb|KMZ70246.1| RNA-binding protein [Zostera marina]
Length = 303
Score = 62.8 bits (151), Expect = 1e-08
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = -3
Query: 120 PATGGRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
P T GRLYVGNLPFSMT +QL+++F +AG V SVEIVYDR
Sbjct: 110 PPTSGRLYVGNLPFSMTPSQLTDVFNQAGSVESVEIVYDR 149
>ref|XP_007162982.1| hypothetical protein PHAVU_001G196700g [Phaseolus vulgaris]
gi|561036446|gb|ESW34976.1| hypothetical protein
PHAVU_001G196700g [Phaseolus vulgaris]
Length = 317
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
GRLY+GNLPFS+T++QL+E+FAEAG V SVEIVYDR
Sbjct: 108 GRLYIGNLPFSITNSQLAELFAEAGTVASVEIVYDR 143
>ref|XP_008442930.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X2
[Cucumis melo]
Length = 321
Score = 62.4 bits (150), Expect = 2e-08
Identities = 25/36 (69%), Positives = 36/36 (100%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
G+LY+GNLP++MTS+QLSE+FAEAG+VVSV+++YD+
Sbjct: 113 GKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDK 148
>ref|XP_008442929.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic isoform X1
[Cucumis melo]
Length = 324
Score = 62.4 bits (150), Expect = 2e-08
Identities = 25/36 (69%), Positives = 36/36 (100%)
Frame = -3
Query: 108 GRLYVGNLPFSMTSAQLSEIFAEAGRVVSVEIVYDR 1
G+LY+GNLP++MTS+QLSE+FAEAG+VVSV+++YD+
Sbjct: 113 GKLYIGNLPYAMTSSQLSEVFAEAGQVVSVQVIYDK 148