BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00004744
         (2899 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   531   e-166
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   511   e-158
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   481   e-147
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   466   e-143
gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposo...   451   e-143
gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposo...   460   e-142
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   466   e-141
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   465   e-141
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   463   e-140
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   462   e-139
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   449   e-138
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   456   e-137
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   451   e-137
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   452   e-136
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   451   e-136
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     447   e-136
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   449   e-135
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   449   e-135
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]   449   e-135
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   427   e-132

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  531 bits (1369), Expect = e-166
 Identities = 296/685 (43%), Positives = 405/685 (59%), Gaps = 20/685 (2%)
 Frame = +3

Query: 576  AKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYNH 755
            AK+ Q+K  L   KK  L + +YL K++   D+LA  GHKI  KD +  +  GL  +Y  
Sbjct: 122  AKVTQFKTQLHNTKKGDLSISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYET 181

Query: 756  VMISVTSRIEPCSLAELHALLLSYEATLESHNSVAN----------AINIEGSQPSIN-- 899
             +ISV SR++P ++ E+ ALLL+ E+ +E +  +A+            N  GS P  N  
Sbjct: 182  FIISVNSRLDPYTVEEIEALLLAQESRIEKNIKIADFSTPSLAHLITTNRNGS-PHFNYR 240

Query: 900  AATHVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHT 1079
            A+T  S                                       N +  CQ+C   GH 
Sbjct: 241  ASTRNSNFRPPTHSGNGMQHFRGNFTQQGRGRHGRGSWK-----GNNKPQCQLCGRIGHV 295

Query: 1080 VDRCWYRNDISCTXXXXXXXXXXXXXXRILTLNMDQ--FGNTSALS*INSE----SSWYP 1241
            V +C+YR D S T                L   + +  F  T ++    +E    ++WYP
Sbjct: 296  VMQCYYRFDQSFTGPSQLQGNRPQGNMAHLHQQLSEXFFPGTPSVKPTTAEIIQDNNWYP 355

Query: 1242 DSGATSHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSH-VCSKAFVLKNL 1418
            DSGAT H+T  L NL   +++  S+ + +GNG G+ I+HIG++ F S  + SK   LK L
Sbjct: 356  DSGATHHLTPNLNNLLTKSQFPSSDEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQL 415

Query: 1419 LHVPSITKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFK 1598
            LHVP ITKNLLSVS+FA DN+VFF+FHP+ C VKD  T+ +L+ G +K GLY  +    K
Sbjct: 416  LHVPEITKNLLSVSKFAADNHVFFEFHPTSCFVKDPSTRTVLMHGQLKGGLYVFDNTQLK 475

Query: 1599 -PDSTSSLQIQLDSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQY 1775
             P   SS      ST++ ++    +V  +  S   LWH RLGH S  ++   L  CNL +
Sbjct: 476  LPLHNSSC---FASTALPSKEP--TVPASPTSPFTLWHNRLGHPSSHIVSLVLNKCNLPH 530

Query: 1776 HANENSTLCSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFID 1955
                 S +CS C + K H+  F  S S  T+PL+L+H+DLWG A   SS+G  YYI FID
Sbjct: 531  LNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFID 590

Query: 1956 HCTRYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGIN 2135
              +R+TWIY+LK K+E   VF+HFK+ VE Q  +KIK++Q+D G EY++ T+    +GI 
Sbjct: 591  AYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGII 650

Query: 2136 HRISCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSK 2315
            HRISCPYT +QNG+AERKHRHIVE G++L+AQ+ LPFKYWD+AF T++Y+INR+P    K
Sbjct: 651  HRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLK 710

Query: 2316 HKSPLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLL 2495
            +KSPLE+L+H KP+   L+VFGC+CYP LRP+N HKLQFRS P TF+GYS  HKGYK L 
Sbjct: 711  NKSPLEVLFHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLS 770

Query: 2496 PNGKVIVSRHVVFDENNFPFASQSS 2570
            PNG +++SR V+FDE  FPFA   S
Sbjct: 771  PNGNILISRDVIFDEXAFPFAQLQS 795



 Score = 61.6 bits (148), Expect = 6e-06
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
 Frame = +1

Query: 271 ISIKLDESNFSTWKQQALTIIKGYGPESFITKDADIPEKFITTG-KGQNQVNPNFMSWQR 447
           +S KLD  NF   ++Q LT ++G+  + F+++ + +P +F+++  + QN VNP F  W++
Sbjct: 19  VSSKLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQNHVNPKFQDWEQ 78

Query: 448 QDQXXXXXXXXXXXXXXXXXXVGFNTSSDIWPALENNFAT 567
           Q Q                  V  +TS+ +W  LE  FAT
Sbjct: 79  QXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFAT 118


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1403

 Score =  511 bits (1317), Expect = e-158
 Identities = 274/670 (40%), Positives = 391/670 (58%), Gaps = 3/670 (0%)
 Frame = +3

Query: 576  AKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYNH 755
            A++ Q KI L+ +KK    + +YL ++K   + LA+ G  +   + +  +  GL  EY+ 
Sbjct: 123  ARVKQLKIQLRGIKKT-TAINQYLLEIKKIVNNLAAIGSPLNTAEHIDAIFDGLSEEYDP 181

Query: 756  VMISVTSRIEPCSLAELHALLLSYEATLESHNSVANA-INIEGSQPSINAATHVSQXXXX 932
             + SV +R E  S+ ++ +LL++ E  LE H +  +  +    +Q S N+    +     
Sbjct: 182  FITSVLTRTEEYSVEQIESLLMAQEERLEKHKASESVPLQANLAQGSFNSRKQFTNQGRG 241

Query: 933  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDIS 1112
                                                +  CQ+C   GH    CW+R D  
Sbjct: 242  SNNNGTHGRGPHRGRGRGRSAQHFG--------RGNKQPCQVCGKIGHIAFHCWHRYDQQ 293

Query: 1113 CTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLNM 1292
             T                  +     G+ + +     +  WYPDSGAT+H+T++L NL  
Sbjct: 294  YTEPNLNHNTNVYNPGNQQQMQAMIAGSQNMVY----DDQWYPDSGATNHLTSDLNNLGS 349

Query: 1293 ATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSITKNLLSVSQFAY 1472
             T+YTG +++ MGNG  +GINH G S F + + SK F LK LLHVP ITKNLLSVS+F  
Sbjct: 350  KTDYTGQDKIHMGNGQAIGINHTGTSFFHTPMSSKIFTLKELLHVPHITKNLLSVSKFCK 409

Query: 1473 DNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLN-IHPFKPDSTSSLQIQLDSTSIK 1649
            DNNV+ +FH ++CLVK Q +K  LLRG +K GLY  + +   KPD     +  +DS    
Sbjct: 410  DNNVYVEFHTNYCLVKSQDSKETLLRGNLKNGLYVFDEVQILKPDV---YEHTVDSVPT- 465

Query: 1650 NRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHAN-ENSTLCSSCALPKS 1826
            NR  L+        D  +WH RL H+S  +++  +K+CN+    N ++S +C SC + KS
Sbjct: 466  NRTTLYVQRTRKSYD--VWHNRLAHASRKIVQAVMKTCNVPMPINHQDSIVCKSCCIGKS 523

Query: 1827 HRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTEV 2006
            H LPFS S +V   PL+LV+SD+WG +   S  GF YY+ F D  ++YTWIY +  K+E 
Sbjct: 524  HTLPFSDSYTVYNSPLELVYSDVWGPSHYASREGFRYYVHFTDAFSKYTWIYFMHNKSET 583

Query: 2007 HNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAER 2186
             + FIHFK++VENQ  +KIK  Q+DGG E+  LTK+F+++GI HR+SCP++ QQNG AER
Sbjct: 584  AHHFIHFKSMVENQFGHKIKMFQSDGGKEFTCLTKLFNENGITHRLSCPHSHQQNGTAER 643

Query: 2187 KHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLLR 2366
            KHRHI E+GL+L++ S LP  +W DAFSTA+++INR+P     HKSP E+L++  P+ L 
Sbjct: 644  KHRHITEVGLTLLSSSGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLFNKIPDYLL 703

Query: 2367 LRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIVSRHVVFDENN 2546
            LR FGC CYP+LRP+N HK+ FRS+   FIGYS QHKGYK    NGK+I+SR+VVFDE+ 
Sbjct: 704  LRPFGCACYPHLRPFNSHKMDFRSSQCVFIGYSMQHKGYKCFTTNGKIIISRNVVFDEDT 763

Query: 2547 FPFASQSSTN 2576
            FP  S  +TN
Sbjct: 764  FPGPSYFNTN 773


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  481 bits (1237), Expect = e-147
 Identities = 267/688 (38%), Positives = 390/688 (56%), Gaps = 16/688 (2%)
 Frame = +3

Query: 573  HAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYN 752
            +AK  Q +  L++   + L + EY+ +++   D L + G  +  K+ +  +L GL  EY 
Sbjct: 141  NAKARQLRNELRSTTLDNLSISEYVLRIQTLVDALTAIGDSVSPKEHLDIILEGLPEEYE 200

Query: 753  HVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXXX 932
              +  ++SR +  ++ E+  LLL +E+ L+     A A        SIN  T V++    
Sbjct: 201  STVSLISSRFDLLTIDEVETLLLGHESRLDKFKKKAAA--------SINVTTAVTEPDPS 252

Query: 933  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFN--------NTRLVCQICHVAGHTVDR 1088
                                             N             CQ+CH  GH    
Sbjct: 253  ATNPQAHLTHQNNQSGPSHRRGGRTNSRGGRFSNWAGRGRGRFAGYQCQVCHRYGHVASA 312

Query: 1089 CWYRNDISCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVT 1268
            C+YR D +                     + +Q  N  A +     ++WYPDSGA++HVT
Sbjct: 313  CYYRFDETYVPSSPLEAPAYP--------SNNQHTNPGACN-----NNWYPDSGASNHVT 359

Query: 1269 NELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK-AFVLKNLLHVPSITKN 1445
            N   N++  T + G +++ +GNG G+ IN  G + F S +  K  F L NLL VPSITKN
Sbjct: 360  NVSQNIHQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVPSITKN 419

Query: 1446 LLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHPFKPDSTSSLQ 1622
            L+SVSQF+ DN+V+F+FHP  CLVK Q T  +LL+G++  +GLY        P + S  Q
Sbjct: 420  LISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQGSVGSDGLYKFPALLPNPSTQSVQQ 479

Query: 1623 IQLDSTSIKNRPQLFSVSLNNDS--DSALWHLRLGHSS*DVIEQALKSCNLQYHANENST 1796
             QL         ++FSV+    S    A WH RLGH + DV++   ++ N+Q  +N  S 
Sbjct: 480  QQL--------ARIFSVNTAATSPVSFATWHSRLGHPNVDVMKHVSRNYNIQLVSNNKSN 531

Query: 1797 LCSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTW 1976
             C+ C L KSHRLP +LS ++   P  LV+SDLWG AP+ S+ G+ YY++F+D  TR+TW
Sbjct: 532  FCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYVTFVDAHTRFTW 591

Query: 1977 IYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPY 2156
            IYLLK+K +  NVF  F  +V+NQ ++ IK+LQTD G EY++ T   ++ GI HR+ CP+
Sbjct: 592  IYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNEVGIQHRLICPH 651

Query: 2157 TPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLEL 2336
            T  QNGVAERKHRHIVE+GL+L+AQ+ LP ++WD +F TA+Y+INR+P+S  ++  P   
Sbjct: 652  THHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHK 711

Query: 2337 LYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIV 2516
            L+H  P+ L LR+FGC C+P+LRPYNKHKLQFRS    F+GYS  HKGYK L  +G++ +
Sbjct: 712  LFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYI 771

Query: 2517 SRHVVFDENNFP----FASQSSTNPSIP 2588
            S+ VVF+E  FP    F+S  +++  +P
Sbjct: 772  SKDVVFNETKFPYKDLFSSSKASDSQLP 799


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1165

 Score =  466 bits (1199), Expect = e-143
 Identities = 259/662 (39%), Positives = 362/662 (54%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            + ++I   K      +K GL M EYL+KMK   D LA  G  +   D V   L GL NEY
Sbjct: 30   TRSRITFLKTEFHRTRKGGLKMEEYLTKMKEIADDLALAGSSVSTMDLVTQTLAGLDNEY 89

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXX 929
            N +++ ++ + E  +  E+ A LL+YE  LE  N+ +N        PS N +T +     
Sbjct: 90   NPIVVQLSDK-EHLTWVEMQAQLLTYENRLEQINNQSNLT----LNPSSNISTILYNRRG 144

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                                 R+VCQ+C   GH    C++R + 
Sbjct: 145  KSNAFGGGRGGQINRGARGGRGRGRA--------TKDRIVCQVCCKPGHAASHCYHRFNK 196

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLN 1289
            +                +    N      ++       +  WY DSGA++HVT +   + 
Sbjct: 197  NYIGQNSDEQKSEKDKEQNYNFNAYVASPSTV-----EDLDWYFDSGASNHVTYDQNKVQ 251

Query: 1290 MATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSITKNLLSVSQFA 1469
               E  G + L +GNG  + I   G+S   +    K+  LK++L+VP ITKNLLS+S+  
Sbjct: 252  EVNENDGKSFLTVGNGANLKIIACGDSSLDTQ--QKSLNLKDILYVPKITKNLLSISKLT 309

Query: 1470 YDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSSLQIQLDSTSIK 1649
            +DN+++ +FH   C VKD++T  ILL G IK+GLY               Q+   STS  
Sbjct: 310  FDNDIYVEFHDVACFVKDKLTGRILLEGKIKDGLY---------------QLPGGSTSTN 354

Query: 1650 NRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSCALPKSH 1829
             RP +F       S    WH +LGH +  V+ + +K CN++    EN   C +C   K+H
Sbjct: 355  KRPHVFF------SIKETWHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAH 408

Query: 1830 RLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTEVH 2009
             LPF  S S   EPL LVHSD+WG API S +GF YY+ F+D  +R+TWIY LK K++V 
Sbjct: 409  NLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVF 468

Query: 2010 NVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAERK 2189
              FI F+NLVENQ N +IK+LQ DGG E+K+L+KV    GI  R SCPYT  QNG AERK
Sbjct: 469  QAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERK 528

Query: 2190 HRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLLRL 2369
            HRH+VE GL+L+AQ+ +P  YW +AFSTA+++INR+P    K+KSP + L+   P+   +
Sbjct: 529  HRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDKNPDYTAM 588

Query: 2370 RVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIVSRHVVFDENNF 2549
            + FGC CYP L+PYN+HKLQF +T   F+GYS  HKGYK L   G++ +SRHVVF+E++F
Sbjct: 589  KTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRHVVFNEHHF 648

Query: 2550 PF 2555
            PF
Sbjct: 649  PF 650


>gb|KYP68420.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 653

 Score =  451 bits (1159), Expect = e-143
 Identities = 251/663 (37%), Positives = 367/663 (55%), Gaps = 3/663 (0%)
 Frame = +3

Query: 573  HAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYN 752
            +AK  Q +  L+        + EY+ +++   D L + G  +  K+ +  +L GL  EY 
Sbjct: 43   NAKARQLRNELRNTSLENQTISEYVLRIQTLVDALTAIGDSVSPKEHLDIILEGLPEEYE 102

Query: 753  HVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIE-GSQPSINAATHVSQXXX 929
              +  ++SR +  ++ E+  LLL +E+   +H    +A +   G + +       ++   
Sbjct: 103  STVSLISSRFDLLTIDEVETLLLGHESPHLAHQENQSAFSQRRGGRTNFRGGCFSNRAGR 162

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                                    CQ+CH  GH    C+YR D 
Sbjct: 163  GRGRFAGYQ-------------------------------CQVCHRYGHVASACYYRFDE 191

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLN 1289
            +                     + +Q  NTS  +     ++WYPDSGA++HVTN   N+ 
Sbjct: 192  TYVPSSPLEAPAYH--------STNQHANTSVCN-----NNWYPDSGASNHVTNVSQNIQ 238

Query: 1290 MATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK-AFVLKNLLHVPSITKNLLSVSQF 1466
              T + G +++ +GNG G+ IN  G + F S +  K  F L NLL VPSITKNL+SVSQF
Sbjct: 239  QFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVPSITKNLISVSQF 298

Query: 1467 AYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHPFKPDSTSSLQIQLDSTS 1643
            + DN+V+F+FHP  CLVK Q TK +LL+G++  +GLY        P + S  Q+Q   + 
Sbjct: 299  SKDNSVYFEFHPYICLVKSQDTKEVLLQGSVGPDGLYQFPALLPTPSTQSVQQVQPARSF 358

Query: 1644 IKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSCALPK 1823
              N      VS       A WH RLGH + DV++   ++ N+Q   N  S  C+ C L K
Sbjct: 359  SVNTTAKSYVSF------ATWHSRLGHPNVDVMKHVSRNFNIQLVTNNKSDFCTPCCLGK 412

Query: 1824 SHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTE 2003
            SHRLP +LS +V   P  LV+SDL G AP+ S+ G+ YY++F+D  TR+T  YLLK+K +
Sbjct: 413  SHRLPSNLSKTVYNTPFDLVYSDLCGPAPVTSTCGYQYYVTFVDAHTRFT--YLLKSKAQ 470

Query: 2004 VHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAE 2183
              NVF  F  +V+NQ ++ IK+LQTD G EY++ T   ++ GI HR+ CP+T  +NGV E
Sbjct: 471  TFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICPHTHHRNGVVE 530

Query: 2184 RKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLL 2363
            RKHRHI+E+GL+L+AQ+ LP ++WD AF T +Y+INR+P+S  ++  P   L+H  P+ L
Sbjct: 531  RKHRHIIELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNAIPYHKLFHQPPDYL 590

Query: 2364 RLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIVSRHVVFDEN 2543
             LR+FGC C+P+LRPYNKHKLQFRS    F+GYS  HKGYK L  + ++ +S  VVF+E 
Sbjct: 591  SLRIFGCSCFPHLRPYNKHKLQFRSQECVFVGYSTSHKGYKCLAADERLYISNDVVFNET 650

Query: 2544 NFP 2552
             FP
Sbjct: 651  KFP 653


>gb|KYP68392.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1085

 Score =  460 bits (1184), Expect = e-142
 Identities = 257/677 (37%), Positives = 372/677 (54%), Gaps = 4/677 (0%)
 Frame = +3

Query: 573  HAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYN 752
            +AK  Q +  L+        + EY+ +++   D L + G  +  K+ +  +L GL  EY 
Sbjct: 43   NAKARQLRNELRNTSLENQTISEYVLRIQTLVDALTAIGDSVSPKEHLDIILEGLPEEYE 102

Query: 753  HVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIE-GSQPSINAATHVSQXXX 929
              +  ++SR +  ++ E+  LLL +E+   +H    +A +   G + +       ++   
Sbjct: 103  STVSLISSRFDLLTIDEVETLLLGHESPHLAHQENQSAFSQRRGGRTNFRGGCFSNRAGR 162

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                                    CQ+CH  GH    C+YR D 
Sbjct: 163  GRGRFAGYQ-------------------------------CQVCHRYGHVASACYYRFDE 191

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLN 1289
            +                     + +Q  NTS  +     ++WYPDSGA++HVTN   N+ 
Sbjct: 192  TYVPSSPLEAPAYH--------STNQHANTSVCN-----NNWYPDSGASNHVTNVSQNIQ 238

Query: 1290 MATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK-AFVLKNLLHVPSITKNLLSVSQF 1466
              T + G +++ +GNG G+ IN  G + F S +  K  F L NLL V SITKNL+SVSQF
Sbjct: 239  QFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPKFQFALNNLLFVLSITKNLISVSQF 298

Query: 1467 AYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHPFKPDSTSSLQIQLDSTS 1643
            + DN+V+F+FHP  CLVK Q TK +LL+G++  +GLY        P + S  Q+Q   + 
Sbjct: 299  SKDNSVYFEFHPYICLVKSQDTKEVLLQGSVGPDGLYQFPALLPTPSTQSVQQVQPARSF 358

Query: 1644 IKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSCALPK 1823
              N      VS       A WH RLGH + DV++   ++ N+Q   N  S  C+ C L K
Sbjct: 359  SVNTAAKSYVSF------ATWHSRLGHPNVDVMKHVSRNFNIQLVTNNKSDFCTPCCLGK 412

Query: 1824 SHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTE 2003
            SHRLP +LS  V   P  LV++DLWG AP+ S+ G+ YY++F+D  TR+TWIYLLK K +
Sbjct: 413  SHRLPSNLSKIVYNTPFDLVYNDLWGPAPVTSTCGYQYYVTFVDAHTRFTWIYLLKNKAQ 472

Query: 2004 VHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAE 2183
              NVF  F  +V NQ ++ IK+LQTD G EY++ T   ++ GI HR+ C +T  QNGV E
Sbjct: 473  TFNVFKQFHAMVNNQYHHPIKALQTDWGGEYRSFTNYLNEVGIQHRLICRHTHHQNGVVE 532

Query: 2184 RKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLL 2363
            RKHRHIVE+GL+L+AQ+ LP ++WD AF T +Y+INR+P+S  ++  P   L+H  P+ L
Sbjct: 533  RKHRHIVELGLTLLAQAELPMQFWDHAFLTGVYLINRLPSSSIQNVVPYHKLFHQPPDYL 592

Query: 2364 RLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIVSRHVVFDEN 2543
             LR+FGC C+P+LRPYNKHKLQFRS    F+GYS  HKGYK L  + ++ +S  VVF+E 
Sbjct: 593  SLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADERLYISNDVVFNET 652

Query: 2544 NFPFASQ-SSTNPSIPH 2591
             FP+    SS+  S+ H
Sbjct: 653  KFPYKELFSSSTASVSH 669


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  466 bits (1199), Expect = e-141
 Identities = 264/711 (37%), Positives = 389/711 (54%), Gaps = 38/711 (5%)
 Frame = +3

Query: 576  AKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYNH 755
            ++  Q +  L+  KK    + EYL ++K+  + L + G  + E++QV  +L GL  E+N 
Sbjct: 103  SRARQLRSELKNTKKLSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNS 162

Query: 756  VMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXXXX 935
             ++ V SR +  ++ ++ ALLL  EA  E       + ++  +          S      
Sbjct: 163  FVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELTSPSVSANVAHTETNASDSNSEHES 222

Query: 936  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDISC 1115
                                            N  ++ CQIC    H    CWYR D   
Sbjct: 223  QELGTEHYNVNANRGRGRGKGRGRGRGKGQAQNQGKVKCQICAKPNHDAINCWYRYDPQA 282

Query: 1116 TXXXXXXXXXXXXXXRILTLN-------------------MDQFGNTSALS*INSESSWY 1238
                           R    N                   MDQF N           +WY
Sbjct: 283  MNQNSRGGYQVGPSNRPQNFNPYMRPTAHLAMPQPYAMPNMDQFSN----------GAWY 332

Query: 1239 PDSGATSHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKS-HVCSKAFVLKN 1415
            PDSGA+ H+T    NL+ ++ YTG +++ MGNG GV I+ +G S F S +  +    LK+
Sbjct: 333  PDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQGVSIHSLGQSQFHSPNEPNVKLTLKD 392

Query: 1416 LLHVPSITKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHP 1592
            LLHVP+I+KNLLSVS+FA DNNV F+FHP  C VK Q +K +LL GT+  +GLY     P
Sbjct: 393  LLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCFVKYQDSKQVLLEGTVGADGLYQFK--P 450

Query: 1593 FKPDSTSSLQIQLDSTSIKNRPQLFSVSLN------------NDSDSALWHLRLGHSS*D 1736
            FK  + S      DS+S+ +  Q FSV  N            N +   +WHLRLGH+   
Sbjct: 451  FKFLTNSGAASNSDSSSMSSSSQ-FSVFNNPVNCNNTVSVMQNGNVFQMWHLRLGHAHTS 509

Query: 1737 VIEQALKSCNLQYHANENSTL-CSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPI 1913
             ++  L  CN+ + +N+ +TL C+ C + KSHRL   LSN+V T+P +++H DLWG AP 
Sbjct: 510  AVKNILNLCNIPF-SNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPF 568

Query: 1914 KSSNGFLYYISFIDHCTRYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTE 2093
             S  G+ YYI+F+D  T++TWIY LKAK++    F  FK L++NQ    IK++Q+D G E
Sbjct: 569  VSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGE 628

Query: 2094 YKTLTKVFHDHGINHRISCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFST 2273
            ++  T + ++ GI HR++CP+T  QNG  ERKHRHIVEMGL+L++ + LP K+WD +F+ 
Sbjct: 629  FRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIVEMGLTLLSHAALPLKFWDHSFTQ 688

Query: 2274 ALYIINRIPNSH-SKHKSPLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGT 2450
            A+Y+INR+P+S     +SP   L+  +P+  +++VFGCLC+P+LRPYN HKLQ+RS+P  
Sbjct: 689  AVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQYRSSPCV 748

Query: 2451 FIGYSNQHKGYKVLLPNGKVIVSRHVVFDENNFPFAS---QSSTNPSIPHT 2594
            ++G S QHKG+K L   G++ +S+ V+F E+ FP+ S    SS+N  + HT
Sbjct: 749  YLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPYLSLFASSSSNSHMSHT 799


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  465 bits (1197), Expect = e-141
 Identities = 263/711 (36%), Positives = 389/711 (54%), Gaps = 38/711 (5%)
 Frame = +3

Query: 576  AKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYNH 755
            ++  Q +  L+  KK    + EYL ++K+  + L + G  + E++QV  +L GL  E+N 
Sbjct: 103  SRARQLRSELKNTKKLSRSVNEYLLRIKSIVNSLVAVGDMVSEQEQVDSILEGLPEEFNS 162

Query: 756  VMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXXXX 935
             ++ V SR +  ++ ++ ALLL  EA  E       + ++  +          S      
Sbjct: 163  FVMMVYSRFDTPTVEDVEALLLLQEAQFEKFKQELTSPSVSANVAHTETNASDSNSEHES 222

Query: 936  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDISC 1115
                                            N  ++ CQIC    H    CWYR D   
Sbjct: 223  QELGTEHYNVNANRGRGRGKGRGRGRGKGQAQNQGKVKCQICAKPNHDAINCWYRYDPQA 282

Query: 1116 TXXXXXXXXXXXXXXRILTLN-------------------MDQFGNTSALS*INSESSWY 1238
                           R    N                   MDQF N           +WY
Sbjct: 283  MNQNSRGGYQVGPSNRPQNFNPYMRPTAHLAMPQPYAMPNMDQFSN----------GAWY 332

Query: 1239 PDSGATSHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKS-HVCSKAFVLKN 1415
            PDSGA+ H+T    NL+ ++ YTG +++ MGNG GV I+ +G S F S +  +    LK+
Sbjct: 333  PDSGASHHLTYNPNNLSYSSPYTGQDQVVMGNGQGVSIHSLGQSQFHSPNEPNVKLTLKD 392

Query: 1416 LLHVPSITKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHP 1592
            LLHVP+I+KNLLSVS+FA DNNV F+FHP  C VK Q +K +LL GT+  +GLY     P
Sbjct: 393  LLHVPNISKNLLSVSKFAQDNNVIFEFHPYHCFVKYQDSKQVLLEGTVGADGLYQFK--P 450

Query: 1593 FKPDSTSSLQIQLDSTSIKNRPQLFSVSLN------------NDSDSALWHLRLGHSS*D 1736
            FK  + S      DS+S+ +  Q FSV  N            N +   +WHLRLGH+   
Sbjct: 451  FKFLTNSGAASNSDSSSMSSSSQ-FSVFNNPVNCNNTVSVMQNGNVFQMWHLRLGHAHTS 509

Query: 1737 VIEQALKSCNLQYHANENSTL-CSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPI 1913
             ++  L  CN+ + +N+ +TL C+ C + KSHRL   LSN+V T+P +++H DLWG AP 
Sbjct: 510  AVKNILNLCNIPF-SNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPF 568

Query: 1914 KSSNGFLYYISFIDHCTRYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTE 2093
             S  G+ YYI+F+D  T++TWIY LKAK++    F  FK L++NQ    IK++Q+D G E
Sbjct: 569  VSYYGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGE 628

Query: 2094 YKTLTKVFHDHGINHRISCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFST 2273
            ++  T + ++ GI HR++CP+T  QNG  ERKHRHIVEMGL+L++ + LP K+WD +F+ 
Sbjct: 629  FRAFTALLNELGIQHRLTCPHTSHQNGTVERKHRHIVEMGLTLLSHADLPLKFWDHSFTQ 688

Query: 2274 ALYIINRIPNSH-SKHKSPLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGT 2450
            A+Y+INR+P+S     +SP   L+  +P+  +++VFGCLC+P+LRPYN HKLQ++S+P  
Sbjct: 689  AVYLINRLPSSAIPLFQSPYHALHQSQPDYSQIKVFGCLCFPHLRPYNNHKLQYKSSPCV 748

Query: 2451 FIGYSNQHKGYKVLLPNGKVIVSRHVVFDENNFPFAS---QSSTNPSIPHT 2594
            ++G S QHKG+K L   G++ +S+ V+F E+ FP+ S    SS+N  + HT
Sbjct: 749  YLGVSPQHKGHKCLDATGRIYISKDVIFHESQFPYLSLFASSSSNSHMSHT 799


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  463 bits (1191), Expect = e-140
 Identities = 260/677 (38%), Positives = 381/677 (56%), Gaps = 4/677 (0%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A++MQ ++  QT +K  L M EY+ K+K+  D LA+ G  + ++DQ+L +L GLG +Y
Sbjct: 193  SRARVMQLRLEFQTTRKGSLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADY 252

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXX 929
            N ++ S+T+R +                     NSVA     E +  S N AT   Q   
Sbjct: 253  NSIVASLTARED-------------------EDNSVA-----EDNVISANLATPQYQHFN 288

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                              +  R  CQ+C   GHTV RC++R DI
Sbjct: 289  NKRSSGQNRQSGFNTRRGTNGGRSQS--------SQHRPQCQLCGKFGHTVVRCYHRFDI 340

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLN 1289
            +                           + S +S    + +W+ D+GAT H++  +  L+
Sbjct: 341  NFQGYNPNMDTVQTNKPNAKNQVQAMMASPSTIS----DEAWFFDTGATHHLSQSIDPLS 396

Query: 1290 MATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSITKNLLSVSQFA 1469
                Y G++++ +GNG  + I H G + F S   SK F L+ +LHVP I  NL+SVSQF 
Sbjct: 397  DVQPYMGNDKVIVGNGKHLRILHTGTTFFPSS--SKTFQLRQVLHVPDIATNLISVSQFC 454

Query: 1470 YDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSSLQIQLDSTSIK 1649
             DNN FF+FHP F  VKDQVTK ILL+G+++ GLY      F P   + +    D +S  
Sbjct: 455  ADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGLYRFPAR-FVPSPAAFVSSSYDRSS-- 511

Query: 1650 NRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSCALPKSH 1829
                    +L+  + + LWH RLGH + ++++  L SCN+ +  ++N+ +C +C   KSH
Sbjct: 512  --------NLSLTTTTTLWHSRLGHPADNILKHILTSCNISHQCHKNN-VCCACQFAKSH 562

Query: 1830 RLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTEVH 2009
            +LPF++  S  + PL L+H+DLWG   I S+ G  Y+I F+D  +R++WIY L +K +  
Sbjct: 563  KLPFNVXVSRASHPLALLHADLWGPXSIPSTTGARYFILFVDDFSRFSWIYPLHSKDQAL 622

Query: 2010 NVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAERK 2189
            +VFI FK+LVENQ N +I+ L++D G E+K  +     HGI  + SCPYTP+QNG AERK
Sbjct: 623  SVFIKFKSLVENQFNSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERK 682

Query: 2190 HRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLLRL 2369
             RHI+E GL+L+A + LPFK+W  AF TA+++INR+P     ++SP ++L+   PN    
Sbjct: 683  LRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNYHIF 742

Query: 2370 RVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLP-NGKVIVSRHVVFDENN 2546
            ++FGCLCYPY+RPYNK+KL +RS+   F+GYS+ HKGY  L P  G++ V+RHVVF E  
Sbjct: 743  KIFGCLCYPYIRPYNKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETV 802

Query: 2547 FPFAS---QSSTNPSIP 2588
            FPF S   QSS+  +IP
Sbjct: 803  FPFQSTPDQSSSVVTIP 819


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  462 bits (1189), Expect = e-139
 Identities = 236/527 (44%), Positives = 326/527 (61%), Gaps = 8/527 (1%)
 Frame = +3

Query: 1035 NTRLVCQICHVAGHTVDRCWYRNDISCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS* 1214
            N +  CQ+C   GH V +C+YR D   T              R       Q       S 
Sbjct: 305  NEKPACQLCGKIGHVVAQCYYRFDH--TFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSE 362

Query: 1215 INSESSWYPDSGATSHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCS 1394
            + S+ +WYPDSGA++HVT    NL  + E+ G N++ +GNGTG+ I HIG S F S   S
Sbjct: 363  VFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSS 422

Query: 1395 KAFVLKNLLHVPSITKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLY 1574
            K  +L +LLHVPSITKNLLSVS+FA DN VFF+FH   C VKDQVT+ +L+ G +++GLY
Sbjct: 423  KPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAVLMVGKVRDGLY 482

Query: 1575 HLNIHPFKPDSTSSLQIQLDSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQAL 1754
              +        T SL       +     ++ + SL++  D  LWH RLGH S   I+  L
Sbjct: 483  AFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFD--LWHKRLGHPSAATIKNVL 540

Query: 1755 KSCNLQYHANENSTLCSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFL 1934
              CN+ +    +S  CSSC L K HR PFSLS++  T+PL+L+H DLWG   + S++G+ 
Sbjct: 541  SKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSNSGYR 600

Query: 1935 YYISFIDHCTRYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKV 2114
            YYI F+D  +R++WI+LL+ K+E    F++FK  VE Q + KIKSLQTD G E++     
Sbjct: 601  YYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRAFQSY 660

Query: 2115 FHDHGINHRISCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINR 2294
              ++GI HR+SCP+T QQNGVAERKHR IVE GL+L+  + LP K+WD++F T +Y+ NR
Sbjct: 661  LAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNR 720

Query: 2295 IPNSHSKHKSPLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQH 2474
            +P +   HK P+E+L+   P+   L+VFGC C+P LRPYN HKLQ+RS   TF+GYS +H
Sbjct: 721  LPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKH 780

Query: 2475 KGYKVLLPNGKVIVSRHVVFDENNFPFASQ--------SSTNPSIPH 2591
            KGYK +  NG+V +S  V+F+E +FP++          S+ +PS  H
Sbjct: 781  KGYKCMSSNGRVYISHDVIFNETSFPYSKTIQVSSCLLSTVSPSTSH 827



 Score = 75.5 bits (184), Expect = 3e-10
 Identities = 44/113 (38%), Positives = 64/113 (56%)
 Frame = +3

Query: 570 SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
           + AK  Q+K  LQ  KK G  + EYL+K+K C D LAS G  +  KD V  +L GL N+Y
Sbjct: 117 TRAKAKQFKTQLQHTKKGGSTIDEYLAKIKVCVDSLASVGVSLSTKDHVESILDGLPNDY 176

Query: 750 NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAAT 908
              + SV  R +  S+ E+ ALL+++E+ +E +N      N   S PS + A+
Sbjct: 177 ESFVTSVILRNDDFSVEEIEALLMAHESRVEKNN------NSLDSSPSAHVAS 223


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1073

 Score =  449 bits (1155), Expect = e-138
 Identities = 223/465 (47%), Positives = 314/465 (67%), Gaps = 8/465 (1%)
 Frame = +3

Query: 1218 NSESSWYPDSGATSHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK 1397
            +S ++WYPDSGA++HVTN   N++  T + G +++ +GNG G+ IN  G + F S +  K
Sbjct: 8    SSNNNWYPDSGASNHVTNVSQNIHQFTPFEGPDQIHVGNGQGLHINSTGVTTFHSPINPK 67

Query: 1398 -AFVLKNLLHVPSITKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGL 1571
              F L NLL VPSITKNL+SVSQF+ DN+V+F+FHP  CLVK Q T  +LL+G++  +GL
Sbjct: 68   FQFALNNLLFVPSITKNLISVSQFSKDNSVYFEFHPHICLVKSQDTNEVLLQGSVGSDGL 127

Query: 1572 YHLNIHPFKPDSTSSLQIQLDSTSIKNRPQLFSVSLNNDS--DSALWHLRLGHSS*DVIE 1745
            Y        P + S  Q QL         ++FSV+    S    A WH RLGH + DV++
Sbjct: 128  YKFPALLPNPSTQSVQQQQL--------ARIFSVNTAATSPVSFATWHSRLGHPNVDVMK 179

Query: 1746 QALKSCNLQYHANENSTLCSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSN 1925
               ++ N+Q  +N  S  C+ C L KSHRLP +LS ++   P  LV+SDLWG AP+ S+ 
Sbjct: 180  HVSRNYNIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTC 239

Query: 1926 GFLYYISFIDHCTRYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTL 2105
            G+ YY++F+D  TR+TWIYLLK+K +  NVF  F  +V+NQ ++ IK+LQTD G EY++ 
Sbjct: 240  GYQYYVTFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSF 299

Query: 2106 TKVFHDHGINHRISCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYI 2285
            T   ++ GI HR+ CP+T  QNGVAERKHRHIVE+GL+L+AQ+ LP ++WD +F TA+Y+
Sbjct: 300  TTYLNEVGIQHRLICPHTHHQNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYL 359

Query: 2286 INRIPNSHSKHKSPLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYS 2465
            INR+P+S  ++  P   L+H  P+ L LR+FGC C+P+LRPYNKHKLQFRS    F+GYS
Sbjct: 360  INRLPSSSIQNAVPYHKLFHQPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYS 419

Query: 2466 NQHKGYKVLLPNGKVIVSRHVVFDENNFP----FASQSSTNPSIP 2588
              HKGYK L  +G++ +S+ VVF+E  FP    F+S  +++  +P
Sbjct: 420  TSHKGYKCLAADGRLYISKDVVFNETKFPYKDLFSSSKASDSQLP 464


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  456 bits (1174), Expect = e-137
 Identities = 255/687 (37%), Positives = 380/687 (55%), Gaps = 16/687 (2%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A+IMQ ++ LQ+ KK  + M +Y+ K+K   D LA+ G  + E+DQV+++L GLG++Y
Sbjct: 132  SRARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDY 191

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSV-------ANAINIEGSQPSINAAT 908
            N V+ ++  R +  SL  +H++LL++E  LE  +S+       A++ N  G     N   
Sbjct: 192  NAVVTAINIRDDKISLEAIHSMLLAFEHRLEQQSSIEQMSANYASSSNNRGGGRKFNGGR 251

Query: 909  HVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDR 1088
                                                      + +  CQ+C   GHT   
Sbjct: 252  GQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSP----------SEKPQCQLCGKFGHTAQI 301

Query: 1089 CWYRNDISCTXXXXXXXXXXXXXXRILTLNMDQFGNTSAL----S*INSESSWYPDSGAT 1256
            C++R DIS                   +LN     N  A+    S   ++ SWY DSGA+
Sbjct: 302  CYHRFDISFQGGQTTISH---------SLNNGNQNNIPAMVASASNNPADESWYLDSGAS 352

Query: 1257 SHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSI 1436
             H+T  LGNL   + YTG++++ +GNG  + I++IG+    SH  S  F LK + HVP I
Sbjct: 353  HHLTQNLGNLTSTSPYTGTDKVTIGNGKHLSISNIGSKQLHSHTHS--FRLKKVFHVPFI 410

Query: 1437 TKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHL----NIHPFKPD 1604
            + NL+SV++F  +NN   +FH +   VKD  TK++L +G ++ GLY      N+ P+   
Sbjct: 411  SANLISVAKFCSENNALIEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPVFSNLKPYSSI 470

Query: 1605 STSSLQIQLDSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHAN 1784
            + +S      S++++N+ +L             WH RLGH+S D++ + + +CN+     
Sbjct: 471  NNASAFHSQFSSTVENKAEL-------------WHNRLGHASFDIVSKVMNTCNVA-SGK 516

Query: 1785 ENSTLCSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCT 1964
              S +CS C L KSHRLP  LSN   ++PL+LV++D+WG A IKS++G  Y+I F+D  +
Sbjct: 517  YKSFVCSDCQLAKSHRLPTQLSNFHASKPLELVYTDIWGPASIKSTSGARYFILFVDDYS 576

Query: 1965 RYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRI 2144
            RYTW Y L+ K +   +F  FK  +ENQ + KIK LQ+D G E+++ T      GI HR 
Sbjct: 577  RYTWFYSLQTKDQALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRF 636

Query: 2145 SCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKS 2324
            SCPY   QNG  ERKHRH+VE GL+L++ + LP KYW  AF T  ++INR+P+   ++ S
Sbjct: 637  SCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDS 696

Query: 2325 PLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVL-LPN 2501
            P   L+   P+    RVFGCLCYP++RPYN HKLQ+RS    F+GYS  HKG+  L    
Sbjct: 697  PYFTLFRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNHKGFLCLDYAT 756

Query: 2502 GKVIVSRHVVFDENNFPFASQSSTNPS 2582
            G+V ++ HVVFDE+ FP A   S++ S
Sbjct: 757  GRVYITPHVVFDESTFPLAQSKSSSSS 783


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1279

 Score =  451 bits (1161), Expect = e-137
 Identities = 266/665 (40%), Positives = 372/665 (55%), Gaps = 5/665 (0%)
 Frame = +3

Query: 576  AKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYNH 755
            A+  Q +  L++   +G  MR++L+++K   D LA  G  +  ++ V  VL GL  EY  
Sbjct: 41   ARARQLRTDLRSTTLDGQSMRDFLTQIKTIADELAGVGSPVSLEEYVDAVLEGLPQEYAP 100

Query: 756  VMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXXXX 935
            V+  + S+     +AE+ ALLL+       H S AN    +   PSIN     S+     
Sbjct: 101  VVSVIESKFVTPPIAEVEALLLA-------HESRANRFRKQSFSPSINYTQGYSRGSVSG 153

Query: 936  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDISC 1115
                                           F N +  CQIC   GHT + C+YR D++ 
Sbjct: 154  GHSGRRGGRGSGRGRGGR-------------FANFQ--CQICFKYGHTANVCFYRADVNY 198

Query: 1116 TXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLNMA 1295
                              +L +    NTS      + SSW PDSGA+ HVT E  N++  
Sbjct: 199  QPAE--------------SLVLAMVANTSQPG---ANSSWIPDSGASFHVTGEPQNIHQL 241

Query: 1296 TEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK-AFVLKNLLHVPSITKNLLSVSQFAY 1472
              + G +++ +GNG G+ IN  G SIF S + S+  F L NLLHVP ITKNLLSVS+FA 
Sbjct: 242  EHFDGPDQIFIGNGQGLQINGSGTSIFISPINSQFKFHLNNLLHVPLITKNLLSVSKFAK 301

Query: 1473 DNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHPFKPDSTSSLQIQ-LDSTSI 1646
            DN VFF+FH + CLVK Q T  +LL+G +  +GLY          S   L++Q LDS   
Sbjct: 302  DNCVFFEFHANHCLVKSQDTNEVLLQGVVGADGLY----------SFPHLKLQVLDS--- 348

Query: 1647 KNRPQLFSVSLNND--SDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSCALP 1820
                  F+ + N+D  S S +WH RLGH +  V++  L  CNL       +  CSSC + 
Sbjct: 349  ------FNFNKNSDVSSSSTMWHTRLGHPNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVG 402

Query: 1821 KSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKT 2000
            KS RLP S S ++ + PL ++ +DLWG + I S +G+LYY++FID  ++YTWIY LK+K 
Sbjct: 403  KSRRLPSSASQTIYSAPLDVIFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKA 462

Query: 2001 EVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVA 2180
            E  +VF  FK + E Q N KIKS+Q+D G EY+  T     +GI HR+ CP+T  QNGV 
Sbjct: 463  ETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPHTHHQNGVV 522

Query: 2181 ERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNL 2360
            ERKHRHIVE+GL+L+  + LP K+WD AF+TA+Y+INR+P++      P   L++  P+ 
Sbjct: 523  ERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDY 582

Query: 2361 LRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIVSRHVVFDE 2540
              LR FGC C+P+LRPY  HKL FRS    F+GYSN HKGYK L  +G++ +S+ V+F+E
Sbjct: 583  KFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNE 642

Query: 2541 NNFPF 2555
            + FP+
Sbjct: 643  HRFPY 647


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  452 bits (1162), Expect = e-136
 Identities = 259/687 (37%), Positives = 372/687 (54%), Gaps = 13/687 (1%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A+IMQ ++  QT KK G  M +Y+ KMK   D LA+ G  + E+D +L +L GLG +Y
Sbjct: 126  SKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDY 185

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNS-----------VANAINIEGSQPSI 896
            N ++ S+T+R +  SL  +H++LL++E  L   +S           +A+  + + ++P  
Sbjct: 186  NSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPNRPHQ 245

Query: 897  NAATHVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGH 1076
                H                                         +TR  CQ+C   GH
Sbjct: 246  PRHYHHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGH 305

Query: 1077 TVDRCWYRNDISCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGAT 1256
            T  +C++R DI+                  + L    F +    +  + + SW+ D+GAT
Sbjct: 306  TAIKCYHRFDINYQGNNG------------VPLAQAPFSHAMXAAAPDHQDSWFFDTGAT 353

Query: 1257 SHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSI 1436
             H+++    L+    Y+G++++ +G+G  + I + G   F     SK F L  +LHVP +
Sbjct: 354  HHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSF--FFPSKTFSLNQVLHVPHL 411

Query: 1437 TKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSS 1616
            + NL+SVS+F  DN VFF+FH S   VKDQVTK ILL+G +++GLY              
Sbjct: 412  STNLISVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLRDGLYEF------------ 459

Query: 1617 LQIQLDSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENST 1796
                    S  + P+ F V+  + SD A+WH RLGH +  ++ +AL SCN       N  
Sbjct: 460  --------SSSSPPRAF-VTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKI 510

Query: 1797 L-CSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYT 1973
              C  C L KSH LP+SLS+S  + PL L+H+DLWG AP  S  G  Y++ FID  +R+T
Sbjct: 511  APCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHT 570

Query: 1974 WIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCP 2153
            WIY L  K +    FI F+ +VENQ    IK +Q+D G E+         HGI H+ SCP
Sbjct: 571  WIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCP 630

Query: 2154 YTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLE 2333
            +TPQQNG AERK RH+VE GL+L+AQS LP KYW  AF TA+Y+IN +P      +SP +
Sbjct: 631  HTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQ 690

Query: 2334 LLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVL-LPNGKV 2510
             L+H  PN   LRVFGCLC+P LRPY +HKL +RST   F+GY+  HKGY  L +   ++
Sbjct: 691  TLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRI 750

Query: 2511 IVSRHVVFDENNFPFASQSSTNPSIPH 2591
             +SR+V+F E++FPF S S  +   PH
Sbjct: 751  YISRNVIFHESSFPFQSSSPPSSPSPH 777


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1358

 Score =  451 bits (1161), Expect = e-136
 Identities = 266/665 (40%), Positives = 372/665 (55%), Gaps = 5/665 (0%)
 Frame = +3

Query: 576  AKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEYNH 755
            A+  Q +  L++   +G  MR++L+++K   D LA  G  +  ++ V  VL GL  EY  
Sbjct: 120  ARARQLRTDLRSTTLDGQSMRDFLTQIKTIADELAGVGSPVSLEEYVDAVLEGLPQEYAP 179

Query: 756  VMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXXXX 935
            V+  + S+     +AE+ ALLL+       H S AN    +   PSIN     S+     
Sbjct: 180  VVSVIESKFVTPPIAEVEALLLA-------HESRANRFRKQSFSPSINYTQGYSRGSVSG 232

Query: 936  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDISC 1115
                                           F N +  CQIC   GHT + C+YR D++ 
Sbjct: 233  GHSGRRGGRGSGRGRGGR-------------FANFQ--CQICFKYGHTANVCFYRADVNY 277

Query: 1116 TXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLNMA 1295
                              +L +    NTS      + SSW PDSGA+ HVT E  N++  
Sbjct: 278  QPAE--------------SLVLAMVANTSQPG---ANSSWIPDSGASFHVTGEPQNIHQL 320

Query: 1296 TEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK-AFVLKNLLHVPSITKNLLSVSQFAY 1472
              + G +++ +GNG G+ IN  G SIF S + S+  F L NLLHVP ITKNLLSVS+FA 
Sbjct: 321  EHFDGPDQIFIGNGQGLQINGSGTSIFISPINSQFKFHLNNLLHVPLITKNLLSVSKFAK 380

Query: 1473 DNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNIHPFKPDSTSSLQIQ-LDSTSI 1646
            DN VFF+FH + CLVK Q T  +LL+G +  +GLY          S   L++Q LDS   
Sbjct: 381  DNCVFFEFHANHCLVKSQDTNEVLLQGVVGADGLY----------SFPHLKLQVLDS--- 427

Query: 1647 KNRPQLFSVSLNND--SDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSCALP 1820
                  F+ + N+D  S S +WH RLGH +  V++  L  CNL       +  CSSC + 
Sbjct: 428  ------FNFNKNSDVSSSSTMWHTRLGHPNSHVLKLVLTQCNLLSSNTHVTEFCSSCCVG 481

Query: 1821 KSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKT 2000
            KS RLP S S ++ + PL ++ +DLWG + I S +G+LYY++FID  ++YTWIY LK+K 
Sbjct: 482  KSRRLPSSASQTIYSAPLDVIFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKA 541

Query: 2001 EVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVA 2180
            E  +VF  FK + E Q N KIKS+Q+D G EY+  T     +GI HR+ CP+T  QNGV 
Sbjct: 542  ETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPHTHHQNGVV 601

Query: 2181 ERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNL 2360
            ERKHRHIVE+GL+L+  + LP K+WD AF+TA+Y+INR+P++      P   L++  P+ 
Sbjct: 602  ERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTTLFNKSPDY 661

Query: 2361 LRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPNGKVIVSRHVVFDE 2540
              LR FGC C+P+LRPY  HKL FRS    F+GYSN HKGYK L  +G++ +S+ V+F+E
Sbjct: 662  KFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSGRIYISKDVIFNE 721

Query: 2541 NNFPF 2555
            + FP+
Sbjct: 722  HRFPY 726


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  447 bits (1150), Expect = e-136
 Identities = 258/669 (38%), Positives = 362/669 (54%), Gaps = 2/669 (0%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A+ +  +I L T +K    + +Y+SKMK   D +AS G  + +++   ++L GL ++Y
Sbjct: 123  SRARALNTRIALATTQKGESSVSDYISKMKTLADEMASAGKPLDDEEFTSYILAGLDSDY 182

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXX 929
              V+ S+  R E  +++E+++ LLS+E   +++ S        GS  S+N+A H      
Sbjct: 183  EQVVSSIVGRSEGVTISEVYSQLLSFEELWQTNGS-------SGSYSSVNSANHGRNNGG 235

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                                 R  CQ+C   GH V  CW+  D 
Sbjct: 236  GGNFNNGGGYFSNRGRGGGRGDRGGCGRGNGGRNFKPRPTCQLCSKVGHVVADCWHCYDD 295

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLN 1289
            S                             +A +    +S+WY D+GAT H+TNEL  L 
Sbjct: 296  SFVPD----------------------ARVAAAASYGVDSNWYVDTGATDHITNELEKLT 333

Query: 1290 MATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSITKNLLSVSQFA 1469
                Y G  ++   +G+G+ I HIG S  ++   ++   L+N+LHVP   KNL+S  + A
Sbjct: 334  TRDRYNGKEQIHTASGSGMDIKHIGQSTIRTP--TRNLYLRNILHVPRTKKNLISAHRLA 391

Query: 1470 YDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSSLQIQLDSTSIK 1649
             DN+ F + HP F  +KDQ+TK  LLRG    GLY L      P STSS +  L +    
Sbjct: 392  VDNHAFVEVHPRFFAIKDQITKNTLLRGPCCNGLYPL------PASTSSSKQVLGAI--- 442

Query: 1650 NRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENST-LCSSCALPKS 1826
             +P +           ++WH RLGH S  ++++ +   NL          +C +C   KS
Sbjct: 443  -KPTV-----------SIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKS 490

Query: 1827 HRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTEV 2006
            H+LPF  S S    PL+LV SD+WG AP  S  G  YY+SFID  +++TWIYLLK K+EV
Sbjct: 491  HQLPFLKSTSASNFPLELVFSDVWGPAP-DSVGGRKYYVSFIDDFSKFTWIYLLKQKSEV 549

Query: 2007 HNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAER 2186
             + F  F+ LVE     KI ++QTD G EY+ L   F   GI+H +SCP+T QQNG AER
Sbjct: 550  FHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAER 609

Query: 2187 KHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLLR 2366
            KHRHIVE+GLSL+A + +P K+WD+AF  A Y+INR P+   ++++PLE L+H KP+   
Sbjct: 610  KHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHLFHQKPSYTS 669

Query: 2367 LRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVL-LPNGKVIVSRHVVFDEN 2543
            LRVFGC C+P LRPYN  KLQFRS    F+GYSN HKG+K L +  G+V +SR VVFDEN
Sbjct: 670  LRVFGCACWPNLRPYNARKLQFRSKQCVFLGYSNLHKGFKCLDVAAGRVYISRDVVFDEN 729

Query: 2544 NFPFASQSS 2570
             FPFAS  S
Sbjct: 730  VFPFASLHS 738


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  449 bits (1155), Expect = e-135
 Identities = 258/679 (37%), Positives = 382/679 (56%), Gaps = 8/679 (1%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A+IMQ  +  Q+ KK  + M +Y+ K+K   D LA+ G  + E+DQ++++L GLG++Y
Sbjct: 129  SRARIMQLXLEFQSTKKGSMSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDY 188

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXX 929
            N V+ ++  R +  SL  +H++LL++E  LE   S+     +  +  S +   +      
Sbjct: 189  NAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASXS--NNRGGGRK 246

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                              ++ R  CQ+C   GHTV  C++R DI
Sbjct: 247  YNGGRGPNFMMTNSNFRGRGRGXRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDI 306

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTS------ALS*INSESSWYPDSGATSHVTN 1271
            +                   T  +   GN++      A S   ++ +WY DSGA+ H+T 
Sbjct: 307  TFQSTQNN------------TTGVSNSGNSNXMPAMVAXSNNXADDNWYLDSGASHHLTQ 354

Query: 1272 ELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSITKNLL 1451
             + NL  AT YTG++++ +GNG  + I++   +   S+  S  F LK + HVP I+ NL+
Sbjct: 355  NVANLTNATPYTGADKVTIGNGKHLTISNTXFTRLFSNPHS--FQLKKVFHVPFISANLI 412

Query: 1452 SVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSSLQIQL 1631
            SV++F  DNN   +FH +   +KD  TK +L +G ++ GLY   +   K   T+ + I  
Sbjct: 413  SVAKFCSDNNALIEFHSNGFFLKDLHTKRVLAQGKLENGLYKFPVISNK--KTAYVGITN 470

Query: 1632 DSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENSTLCSSC 1811
            DST        F  S N ++   LWH RLGH++ D++ + + +CN+       +T+CSSC
Sbjct: 471  DST--------FQCS-NIENKRELWHHRLGHAATDIVTRIMHNCNVSC-GKYKATVCSSC 520

Query: 1812 ALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLK 1991
             L KSHRLP  LS+   ++PL+LV++D+WG A + S++G  Y+I F+D  +RYTW+YLL+
Sbjct: 521  QLAKSHRLPTHLSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQ 580

Query: 1992 AKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQN 2171
            +K +   +F  FK  VENQ   KIK LQ D G E+++      + GI HR SCPY   QN
Sbjct: 581  SKDQALPIFKXFKLQVENQFEAKIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQN 640

Query: 2172 GVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHK 2351
            G  ERKHRH+VE GL+L+A + LP K+W  AF TA ++INR+P+    + SP   L+   
Sbjct: 641  GRVERKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRN 700

Query: 2352 PNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVLLPN--GKVIVSRH 2525
            P+   LRVFGCLCYP++RPYN HKLQ+RS    F+GYS  HKGY + L N  G+V VS H
Sbjct: 701  PDYKFLRVFGCLCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGY-LCLDNLTGRVYVSPH 759

Query: 2526 VVFDENNFPFASQSSTNPS 2582
            VVFDE  FPFA   S++PS
Sbjct: 760  VVFDETQFPFAQNISSSPS 778


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  449 bits (1156), Expect = e-135
 Identities = 254/679 (37%), Positives = 381/679 (56%), Gaps = 2/679 (0%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A+ +  +I L T KK    + EY +KM+   D L + G  + +++ V  +LTGL  ++
Sbjct: 122  SRARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDF 181

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNSVANAINIEGSQPSINAATHVSQXXX 929
            N ++ +V +R +P +  +L+  LLSYE  +      ++ +    +  S        +   
Sbjct: 182  NPLVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSLMQSSANARSPGRGMSWGRSGG 241

Query: 930  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGHTVDRCWYRNDI 1109
                                               ++R  CQ+C   GHT   CWYR D 
Sbjct: 242  RGFSRGRGRGRGPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFDE 301

Query: 1110 SCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGATSHVTNELGNLN 1289
            +                       DQ    SA     S   WY D+GAT H+T +L  L 
Sbjct: 302  NYVP--------------------DQRSANSAAHQNGSNVPWYTDTGATDHITGDLDRLT 341

Query: 1290 MATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSITKNLLSVSQFA 1469
            M  +YTG++++   NGTG+ I++IGN+I  +   S++  L+++LHVPS  KNL+SV +  
Sbjct: 342  MHDKYTGTDQIIAANGTGMTISNIGNAIVPTS--SRSLHLRSVLHVPSTHKNLISVHRLT 399

Query: 1470 YDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSSLQIQLDSTSIK 1649
             DN+VF +FH S  L+KD+ TK +LL G  ++GLY L  HP        L+++ + +S +
Sbjct: 400  NDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPLPPHP-------DLRLKHNFSSTR 452

Query: 1650 NRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENST-LCSSCALPKS 1826
                   V L +      WH RLGH S D++ + + + NL   +N ++T +C +C   K+
Sbjct: 453  -------VPLEH------WHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKA 499

Query: 1827 HRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYTWIYLLKAKTEV 2006
            H+LP+++S S  + PL L+ SD++G A I S   + YY+SFID  +++TWIYLL+ K++V
Sbjct: 500  HQLPYTISMSQSSAPLMLIFSDVFGPA-IDSFGRYKYYVSFIDDYSKFTWIYLLRHKSDV 558

Query: 2007 HNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCPYTPQQNGVAER 2186
            +  F  F++LVE     KI + Q+D G EY+ L   F   GI+H++SCP+T QQNG AER
Sbjct: 559  YKSFCEFQHLVERMFGRKIIAFQSDWGGEYEKLNAHFKTIGIHHQVSCPHTHQQNGAAER 618

Query: 2187 KHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLELLYHHKPNLLR 2366
            KHRHIVE+GL+L+AQS +P KYWD AF  A+Y+INR P+    H +PL  L    P+   
Sbjct: 619  KHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPSKTIAHDTPLHKLTGATPDYSS 678

Query: 2367 LRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVL-LPNGKVIVSRHVVFDEN 2543
            LR+FGC C+P LRPYN+HKLQFRST   F+GYSN HKG+K L +  G++ +SR VVFDE+
Sbjct: 679  LRIFGCACWPNLRPYNQHKLQFRSTRCVFLGYSNMHKGFKCLDISTGRIYISRDVVFDEH 738

Query: 2544 NFPFASQSSTNPSIPHTTD 2600
             FPFAS +  N  + +T++
Sbjct: 739  VFPFASLNK-NAGVKYTSE 756


>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
          Length = 1434

 Score =  449 bits (1155), Expect = e-135
 Identities = 258/687 (37%), Positives = 371/687 (54%), Gaps = 13/687 (1%)
 Frame = +3

Query: 570  SHAKIMQYKILLQTLKKNGLPMREYLSKMKACCDVLASTGHKIPEKDQVLHVLTGLGNEY 749
            S A+IMQ ++  QT KK G  M +Y+ KMK   D LA+ G  + E+D +L +L GLG +Y
Sbjct: 126  SKARIMQLRLEFQTTKKGGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDY 185

Query: 750  NHVMISVTSRIEPCSLAELHALLLSYEATLESHNS-----------VANAINIEGSQPSI 896
            N ++ S+T+R +  SL  +H++LL++E  L   +S           +A+  + + ++P  
Sbjct: 186  NSIVASLTAREDDLSLHSVHSILLTHEQRLHLQHSSPTDPSFASAHMASVPSRQPNRPHQ 245

Query: 897  NAATHVSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNTRLVCQICHVAGH 1076
                H                                         +TR  CQ+C   GH
Sbjct: 246  PRHYHHPSRPQHQASSSSNRPPTRFHPQQPRNNHPIPSAHNKPHHLSTRPQCQLCGKFGH 305

Query: 1077 TVDRCWYRNDISCTXXXXXXXXXXXXXXRILTLNMDQFGNTSALS*INSESSWYPDSGAT 1256
            T  +C++R DI+                  + L    F +    +  + + SW+ D+GAT
Sbjct: 306  TAIKCYHRFDINYQGNNG------------VPLAQAPFSHAMLAAAPDHQDSWFFDTGAT 353

Query: 1257 SHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSKAFVLKNLLHVPSI 1436
             H+++    L+    Y+G++++ +G+G  + I + G   F     SK F L  +LHVP +
Sbjct: 354  HHLSHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSF--FFPSKTFSLNQVLHVPHL 411

Query: 1437 TKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTIKEGLYHLNIHPFKPDSTSS 1616
            + NL+SVS+F  DN VFF+ H S   VKDQVTK ILL+G +++GLY              
Sbjct: 412  STNLISVSKFXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLRDGLYEF------------ 459

Query: 1617 LQIQLDSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCNLQYHANENST 1796
                    S  + P+ F V+  + SD A+WH RLGH +  ++ +AL SCN       N  
Sbjct: 460  --------SSSSPPRAF-VTTGSFSDGAIWHSRLGHPAVPILSKALASCNPSVTLQINKI 510

Query: 1797 L-CSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYISFIDHCTRYT 1973
              C  C L KSH LP+SLS+S  + PL L+H+DLWG AP  S  G  Y++ FID  +R+T
Sbjct: 511  APCIICPLAKSHSLPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHT 570

Query: 1974 WIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDHGINHRISCP 2153
            WIY L  K +    FI F+ +VENQ    IK +Q+D G E+         HGI H+ SCP
Sbjct: 571  WIYFLSTKDQALQSFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCP 630

Query: 2154 YTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNSHSKHKSPLE 2333
            +TPQQNG AERK RH+VE GL+L+AQS LP KYW  AF TA+Y+IN +P      +SP +
Sbjct: 631  HTPQQNGRAERKIRHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQ 690

Query: 2334 LLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYKVL-LPNGKV 2510
             L+H  PN   LRVFGCLC+P LRPY +HKL +RST   F+GY+  HKGY  L +   ++
Sbjct: 691  TLFHKLPNYHHLRVFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRI 750

Query: 2511 IVSRHVVFDENNFPFASQSSTNPSIPH 2591
             +SR+V+F E++FPF S S  +   PH
Sbjct: 751  YISRNVIFHESSFPFQSSSPPSSPSPH 777


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 839

 Score =  427 bits (1098), Expect = e-132
 Identities = 217/455 (47%), Positives = 290/455 (63%), Gaps = 5/455 (1%)
 Frame = +3

Query: 1233 WYPDSGATSHVTNELGNLNMATEYTGSNRLQMGNGTGVGINHIGNSIFKSHVCSK-AFVL 1409
            WYPDSGA++HVTN   N+   T + G +++ +GNG G+ IN  G + F S +    +  L
Sbjct: 11   WYPDSGASNHVTNVSHNIQQYTPFEGPDQIVIGNGQGIPINSSGVTHFSSPLNPHISLTL 70

Query: 1410 KNLLHVPSITKNLLSVSQFAYDNNVFFDFHPSFCLVKDQVTKVILLRGTI-KEGLYHLNI 1586
             NLL+VP+ITKNL+SVSQF  DN+VFF+FH +FCLVK Q     LL G +  +GLY    
Sbjct: 71   HNLLYVPTITKNLISVSQFCKDNSVFFEFHSTFCLVKSQANSETLLHGVLGPDGLY---- 126

Query: 1587 HPFKPDSTSSLQIQLDSTSIKNRPQLFSVSLNNDSDSALWHLRLGHSS*DVIEQALKSCN 1766
                         Q  S     +P   +VS  + S  A WH RLGH   DV++   K CN
Sbjct: 127  -------------QFPSLLPPRQPSAHTVSSQSVS-YATWHSRLGHPHNDVLKSVFKLCN 172

Query: 1767 LQYHANENSTLCSSCALPKSHRLPFSLSNSVCTEPLKLVHSDLWGLAPIKSSNGFLYYIS 1946
                    S  C+SC L KSH+LP  LS +V   P +L++SDLWG AP+ S NG+ YY++
Sbjct: 173  FPNINKSVSDFCTSCCLGKSHKLPSQLSKTVYHTPFELIYSDLWGPAPVLSDNGYQYYVT 232

Query: 1947 FIDHCTRYTWIYLLKAKTEVHNVFIHFKNLVENQSNYKIKSLQTDGGTEYKTLTKVFHDH 2126
            F+D  TR+TWI++LK+K    +VF  F  +V NQ    IK++QTD G E+++ T     H
Sbjct: 233  FVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEFRSFTSYLAQH 292

Query: 2127 GINHRISCPYTPQQNGVAERKHRHIVEMGLSLIAQSHLPFKYWDDAFSTALYIINRIPNS 2306
            GI+HRI CP+T  QNGV ERKHRHIVE+GL+L+AQ+HLP  +WD AF T++Y+INR+P+S
Sbjct: 293  GIHHRIICPHTHHQNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSS 352

Query: 2307 HSKHKSPLELLYHHKPNLLRLRVFGCLCYPYLRPYNKHKLQFRSTPGTFIGYSNQHKGYK 2486
              +   P   L+HH P+   LRVFGC C+P+LRPYNK KLQFRS    F+GYS  HKGYK
Sbjct: 353  SIQQDVPFRKLFHHLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYK 412

Query: 2487 VLLPNGKVIVSRHVVFDENNFPFA---SQSSTNPS 2582
             L P+G+V +S+ V+F EN FP+    S S+ +PS
Sbjct: 413  CLAPSGRVFISKDVIFCENRFPYPTLFSPSTPSPS 447