BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00004724
         (2692 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III s...   920   0.0  
ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III s...   766   0.0  
emb|CDP02819.1| unnamed protein product [Coffea canephora]            708   0.0  
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       614   0.0  
ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III s...   583   0.0  
ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III s...   579   0.0  
ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III s...   576   0.0  
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   556   0.0  
ref|XP_015578439.1| PREDICTED: DNA-directed RNA polymerase III s...   555   0.0  
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   553   0.0  
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s...   546   0.0  
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   546   0.0  
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s...   543   e-179
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   543   e-179
ref|XP_015083434.1| PREDICTED: DNA-directed RNA polymerase III s...   541   e-179
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s...   539   e-178
ref|XP_015083435.1| PREDICTED: DNA-directed RNA polymerase III s...   535   e-176
ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III s...   532   e-175
ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III s...   531   e-175
gb|EEF37239.1| DNA-directed RNA polymerase, putative [Ricinus co...   522   e-171

>ref|XP_011099592.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Sesamum
            indicum]
          Length = 683

 Score =  920 bits (2377), Expect = 0.0
 Identities = 476/677 (70%), Positives = 533/677 (78%), Gaps = 6/677 (0%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPEY 503
            GPS+ PNRP+RFAPKGSKFKPRPK EPSQ   P+ASD+VE  PVPKKEE GIK DIKPE+
Sbjct: 12   GPSQVPNRPSRFAPKGSKFKPRPKTEPSQLPPPAASDTVEGLPVPKKEEPGIKPDIKPEF 71

Query: 504  ANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYVL 683
            AND  +M               LM                     YF+P +D  TRLYVL
Sbjct: 72   ANDGNDMDVEVKPEVKEEEGDDLMETEAEAEPDDAIVREIDV---YFTPSIDSNTRLYVL 128

Query: 684  QYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTTS 863
            QYPLR  WRPYELD RC+EVRVKPAS E+E+DL V VDSKNYDSGADPRVQMKKQILT+S
Sbjct: 129  QYPLRPLWRPYELDDRCDEVRVKPASAELEVDLAVDVDSKNYDSGADPRVQMKKQILTSS 188

Query: 864  WEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVKSEE 1043
            W+P H SGYAVG+LTGNKLHLNP+HAV QLRP M+H+D+K+SK K++   NV D VK EE
Sbjct: 189  WKPPHASGYAVGILTGNKLHLNPVHAVVQLRPSMQHLDAKDSKRKTI---NVEDRVKLEE 245

Query: 1044 PQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISFSMS 1223
            PQEG             EQ  DS E W+PLKYH A SD+   YL+KMM+R  SQI FSMS
Sbjct: 246  PQEGKPSGSSKKLSKVPEQNNDSGEGWIPLKYHSAKSDVAAGYLRKMMSRGGSQIYFSMS 305

Query: 1224 SNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDES 1403
            S DYLNSLCPGTSSD FSSKGP  RVLLTLPLKERFRTWLL+GP VHRFDALK+L  DES
Sbjct: 306  SCDYLNSLCPGTSSDSFSSKGPPRRVLLTLPLKERFRTWLLEGPRVHRFDALKYLAPDES 365

Query: 1404 VEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLPNN- 1580
            VEE+L V+Q+HAR+VQGLWVPKSSLVYGTDQG++VLARDYVLLLFSKN+II +SQLP   
Sbjct: 366  VEEILGVIQEHARLVQGLWVPKSSLVYGTDQGVEVLARDYVLLLFSKNIIINNSQLPQRP 425

Query: 1581 KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI- 1757
            +L+ AMK+VLNVLAV+R  F DWKLKELPD SF+K NPS+V+KQ        K IND + 
Sbjct: 426  QLSKAMKEVLNVLAVERPAFSDWKLKELPDISFIKRNPSIVQKQEEEWECLEKKINDLLF 485

Query: 1758 GGRNGPG----KKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFK 1925
            GGRNGPG     KS+TT NPA  KSS++V  R P  A S+TAM EEVREA+TKALQKLFK
Sbjct: 486  GGRNGPGVKTSSKSNTTNNPAAPKSSNRVATRAPNGAPSKTAMPEEVREAVTKALQKLFK 545

Query: 1926 SVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGI 2105
            S+K+CSFQQISQ LRDMAVSES RSTGFAREAV AANSIDA+PDELQ II+QVAVNIHGI
Sbjct: 546  SIKVCSFQQISQRLRDMAVSESKRSTGFAREAVAAANSIDAFPDELQAIISQVAVNIHGI 605

Query: 2106 CVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQE 2285
            CVPKSSPDNPQYDPFRK+VIDLF+AE PNAKLKKA ILEA+KMELKR+IS IEYQKVLQE
Sbjct: 606  CVPKSSPDNPQYDPFRKIVIDLFLAEGPNAKLKKAPILEAAKMELKRDISPIEYQKVLQE 665

Query: 2286 LCLSQGSAWILRSAGGN 2336
            LCLSQGSAW+LRSA GN
Sbjct: 666  LCLSQGSAWVLRSADGN 682


>ref|XP_012855127.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Erythranthe
            guttata]
          Length = 676

 Score =  766 bits (1979), Expect = 0.0
 Identities = 416/677 (61%), Positives = 481/677 (71%), Gaps = 11/677 (1%)
 Frame = +3

Query: 333  KGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELG--IKSDIKPEYA 506
            + P R  RFAPKG K  P+PKIEPSQ L PSASD ++  P+PKKEE    I+ DIKPE+A
Sbjct: 15   RAPTRVVRFAPKGGKLNPKPKIEPSQPLPPSASDPMDTLPLPKKEEPKPEIEPDIKPEHA 74

Query: 507  NDAVEMXXXXXXXXXXXXXXX----LMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRL 674
            N A+EM                                          Y +  VDP T L
Sbjct: 75   NGAMEMDVEVKPDVKVKEDLMETEVAESVLDPVVKESTVDEVVREIDVYLNHSVDPNTCL 134

Query: 675  YVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQIL 854
            +V QYPLR  WRPYELD++C+EVRVKP+   VEIDL V   SKNYD+ ADP++QM+KQ L
Sbjct: 135  HVWQYPLRPLWRPYELDEKCDEVRVKPSGEGVEIDLAVDTYSKNYDTTADPKLQMQKQTL 194

Query: 855  TTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGP-SNVNDTV 1031
             ++W P H SG AV VL GNKL+LNPIHAV QLRP M+H+D+++SK K     SN  D+V
Sbjct: 195  RSTWMPPHASGQAVAVLVGNKLYLNPIHAVVQLRPSMKHLDAEDSKKKKTNARSNTKDSV 254

Query: 1032 KSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV--SQ 1205
            K E+PQ                QTK    DWVPLKYH A SD+   Y++KMMAREV  SQ
Sbjct: 255  KLEDPQPSGA------------QTKP---DWVPLKYHSARSDMAATYVKKMMAREVEGSQ 299

Query: 1206 ISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKH 1385
            ISFSMSSNDY+NSLCPGTSS  FSS  P IR LL LPLKERF+TWLL+   VHRFDALKH
Sbjct: 300  ISFSMSSNDYINSLCPGTSSGSFSSNVPPIRSLLALPLKERFKTWLLEANTVHRFDALKH 359

Query: 1386 LIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDS 1565
            L  DES+EEVL VLQD AR+VQGLW PKS LVYG D G+ VLARDYVL LFSKNVII +S
Sbjct: 360  LAPDESIEEVLEVLQDLARLVQGLWFPKSRLVYGIDHGLDVLARDYVLALFSKNVIITNS 419

Query: 1566 QLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKI 1742
            QLP   +LA AMKDVLNVLAV+R  F DWKLK  PD +F+K N S+VKK         K 
Sbjct: 420  QLPLRPQLANAMKDVLNVLAVERPAFDDWKLKASPDSNFMKFNQSIVKKHEEEWQGVEKK 479

Query: 1743 INDTIG-GRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKL 1919
            IND     +N    +S+    PA  KSSS V  RTP V+ SRTAMS++VREAI KALQKL
Sbjct: 480  INDDFNVAKNKAAMRSNAAKKPAIPKSSSNVETRTPNVSTSRTAMSDDVREAIKKALQKL 539

Query: 1920 FKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIH 2099
            FKSVK+CS QQISQ LRDMAVSES RSTGF+REAV AANSIDAYPDELQ II++VAVNIH
Sbjct: 540  FKSVKVCSLQQISQRLRDMAVSESTRSTGFSREAVAAANSIDAYPDELQAIISEVAVNIH 599

Query: 2100 GICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVL 2279
            GICVPKSSPD+PQYDPFRKVVIDLF+AE PNAK+KKA+++EA+K+ELKR+I   EYQKV+
Sbjct: 600  GICVPKSSPDHPQYDPFRKVVIDLFIAEGPNAKIKKASMVEAAKVELKRDIPPNEYQKVV 659

Query: 2280 QELCLSQGSAWILRSAG 2330
            QELCLSQGSAW+L+S G
Sbjct: 660  QELCLSQGSAWVLKSTG 676


>emb|CDP02819.1| unnamed protein product [Coffea canephora]
          Length = 687

 Score =  708 bits (1827), Expect = 0.0
 Identities = 368/679 (54%), Positives = 463/679 (68%), Gaps = 7/679 (1%)
 Frame = +3

Query: 327  PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPV-PKKEELGIKSDIKPEY 503
            PS+ P RP+RFAPKGSKFKPR +   + S   +  + +++ PV P        +    + 
Sbjct: 9    PSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTTAAAGKAEDA 68

Query: 504  ANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYVL 683
            A+ +V                                        Y +P +DP T+LYVL
Sbjct: 69   ASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSIDPNTKLYVL 128

Query: 684  QYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTTS 863
            QYPLR  WRPYELD RCEEVRVK  S EVE+DL V VDSKNYDS ADPRV M KQ LT+S
Sbjct: 129  QYPLRPLWRPYELDDRCEEVRVKSKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSS 188

Query: 864  WEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVKSEE 1043
            W+P   +GYAVGVL GNKLHLNPIHAV QLRP M+H   + SK ++   SN+ D  K EE
Sbjct: 189  WKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEE 248

Query: 1044 PQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISFSMS 1223
               G             EQ KD+ EDW+PL YHGA SD++  Y++KM+  + S I FSM+
Sbjct: 249  VTTGSLKKQGKSSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN 308

Query: 1224 SNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDES 1403
             +DY+N+LCPGTS++   S GPS RVLL+LPL+ERFRTWLLQGPP+HRFDALKHL  D S
Sbjct: 309  RHDYVNTLCPGTSNENNGSNGPSRRVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDAS 368

Query: 1404 VEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP-NN 1580
            VE++L VL  HA++VQGLW+PKSSL+YG DQGI  LARDYVLLLFS+  II +SQLP   
Sbjct: 369  VEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQ 428

Query: 1581 KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI- 1757
            KL  AM+DVLN +A +R +  DWK KE PD +F+K N  +V++Q        K+I + I 
Sbjct: 429  KLNRAMRDVLNTVAFERASLNDWKFKEPPDMTFIKLNSKIVREQEQTWERLEKLITEKIF 488

Query: 1758 GGRNGPGKKSD----TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFK 1925
            G +N P  K+     TT NPATSKS SK  + +      R  MSEE REA+ KALQKLF+
Sbjct: 489  GDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQ 548

Query: 1926 SVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGI 2105
            S K+CSFQQI Q LR+MAVSES+R  GFAREA+ AA+ ++A P+ELQ II+QVA+NIHG+
Sbjct: 549  SHKVCSFQQICQRLREMAVSESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGV 608

Query: 2106 CVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQE 2285
             V KSSP +P++D FRKVVIDLF+AE PNAKLKKA+++EA+K++LKR+I+ +EYQKV+QE
Sbjct: 609  YVLKSSPVHPEHDEFRKVVIDLFIAEGPNAKLKKASMIEAAKLQLKRDINSLEYQKVVQE 668

Query: 2286 LCLSQGSAWILRSAGGNTK 2342
            LC+SQGSAW+L+S  GN K
Sbjct: 669  LCVSQGSAWVLKSGDGNPK 687


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  614 bits (1584), Expect = 0.0
 Identities = 338/679 (49%), Positives = 424/679 (62%), Gaps = 7/679 (1%)
 Frame = +3

Query: 327  PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPV-PKKEELGIKSDIKPEY 503
            PS+ P RP+RFAPKGSKFKPR +   + S   +  + +++ PV P        +    + 
Sbjct: 9    PSQAPTRPSRFAPKGSKFKPRTEPVAATSNSIAKKEELDSKPVSPINSSTTAAAGKAEDA 68

Query: 504  ANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYVL 683
            A+ +V                                        Y +P +DP T+LYVL
Sbjct: 69   ASASVSQSVAMDVDAKVEEEAEQPKDEPMESREEGEDEIVREIDVYLTPSIDPNTKLYVL 128

Query: 684  QYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTTS 863
            QYPLR  WRPYELD RCEEVRVK  S EVE+DL V VDSKNYDS ADPRV M KQ LT+S
Sbjct: 129  QYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSS 188

Query: 864  WEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVKSEE 1043
            W+P   +GYAVGVL GNKLHLNPIHAV QLRP M+H   + SK ++   SN+ D  K EE
Sbjct: 189  WKPPVTAGYAVGVLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEE 248

Query: 1044 PQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISFSMS 1223
               G             EQ KD+ EDW+PL YHGA SD++  Y++KM+  + S I FSM 
Sbjct: 249  VTTGSLKKQGKPSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSM- 307

Query: 1224 SNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQDES 1403
            ++DY+N+LCPGTS++   S GPS RVLL+LPL+ERFRTWLLQGPP+HRFDALKHL  D S
Sbjct: 308  NHDYVNTLCPGTSNENNGSNGPS-RVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDAS 366

Query: 1404 VEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP-NN 1580
            VE++L VL  HA++VQGLW+PKSSL+YG DQGI  LARDYVLLLFS+  II +SQLP   
Sbjct: 367  VEDILAVLSQHAQLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQ 426

Query: 1581 KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIINDTI- 1757
            KL  AM+DVL+ +A +R +  DWK KE PD +F+K NP +V++Q        K+I + I 
Sbjct: 427  KLNRAMRDVLDTVAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIF 486

Query: 1758 GGRNGPGKKSD----TTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFK 1925
            G +N P  K+     TT NPATSKS SK  + +      R  MSEE REA+ KALQKLF+
Sbjct: 487  GDKNRPATKNSSRPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQ 546

Query: 1926 SVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQVAVNIHGI 2105
            S K+C FQQI Q LR+MAVSES+R  GFAREA+ AA+ ++A P+ELQ II+QVA+NIHG+
Sbjct: 547  SHKVC-FQQICQRLREMAVSESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGV 605

Query: 2106 CVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQE 2285
             V KSSP +P++D F                                         V+QE
Sbjct: 606  YVLKSSPVHPEHDEF-----------------------------------------VVQE 624

Query: 2286 LCLSQGSAWILRSAGGNTK 2342
            LC+SQGSAW+L+S  GN K
Sbjct: 625  LCVSQGSAWVLKSGDGNPK 643


>ref|XP_009794022.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana sylvestris]
          Length = 681

 Score =  583 bits (1502), Expect = 0.0
 Identities = 331/681 (48%), Positives = 434/681 (63%), Gaps = 9/681 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPK--IEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIK 494
            GPSK P RP+RFAPK SK KP+P+   +P      S+SD     P+P KKEEL  K  +K
Sbjct: 10   GPSKAPTRPSRFAPKSSKLKPQPQQVTKPKPETPLSSSDP----PIPTKKEELVSKPSVK 65

Query: 495  PEYANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXX-YFSPCVDPKTR 671
               A +   M               +                       +F+P  DP ++
Sbjct: 66   DHPAENGAAMVKDDVPLDENTTGDDVAEEEQVTMDTDSVEDEVVREIDVFFTPSSDPNSQ 125

Query: 672  LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 851
            LYV QYPLR  WRPYEL++RC+EVR++P++ ++E+DL V  DSKN+D  +   V+M+KQ 
Sbjct: 126  LYVFQYPLRSVWRPYELEERCQEVRLRPSTAQMEVDLAVDFDSKNFDRDSVHAVKMEKQT 185

Query: 852  LTTSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVND 1025
            L+TSW P  +  SGYAVGVL G+KLHLNPIHAV QLRP  +H+   E K K++   +   
Sbjct: 186  LSTSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELKKKNIATGSDGK 245

Query: 1026 TVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQ 1205
            TV+++E +E                 KD EE WV LKYHGA SD++ RYLQ+M   E S 
Sbjct: 246  TVENKEVEEKKPAGPSKKQNKPPGNVKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSP 305

Query: 1206 ISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKH 1385
            +SFSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKH
Sbjct: 306  VSFSMSPIDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKH 364

Query: 1386 LIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDS 1565
            L  D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK  
Sbjct: 365  LALDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQK 424

Query: 1566 QLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKI 1742
                      A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K 
Sbjct: 425  VFARRLDFLKAAKPTLKSLAVERLDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQ 484

Query: 1743 INDTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKL 1919
            IN  + GGRN P  K+    N   +  +     +    + SRT+MSE+ REA+ KALQK+
Sbjct: 485  INGILSGGRNKPPMKN---LNSNANIPALPGGGKPAPGSLSRTSMSEKTREALPKALQKV 541

Query: 1920 FKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSID-AYPDELQTIINQVAVNI 2096
            F+  K CSFQQI Q LRD+AVSES +  G A++A+ AANS+D A P+E+Q +INQVAVNI
Sbjct: 542  FRIYKACSFQQIRQRLRDVAVSESQK--GDAKKAITAANSVDDAPPEEIQAVINQVAVNI 599

Query: 2097 HGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKV 2276
            HG+ V KSSPDNPQYD  RKVVIDL +AE P+AKLKKA+I+EA+K++L R+I+ IE++KV
Sbjct: 600  HGVYVLKSSPDNPQYDALRKVVIDLLMAEGPSAKLKKASIVEAAKLQLNRDITDIEFKKV 659

Query: 2277 LQELCLSQGSAWILRSAGGNT 2339
            +QELC S+ SAW+LRS  G++
Sbjct: 660  MQELCESKNSAWVLRSGDGSS 680


>ref|XP_009621595.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Nicotiana tomentosiformis]
          Length = 682

 Score =  579 bits (1492), Expect = 0.0
 Identities = 326/679 (48%), Positives = 427/679 (62%), Gaps = 7/679 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIKPE 500
            GPSK P RP+RFAPK SK KP+P  +P    +P    S    P+P KKEEL  K  +K  
Sbjct: 10   GPSKAPTRPSRFAPKSSKLKPQP--QPVTKPKPGTPSSSSDPPIPTKKEELVSKPSVKDH 67

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXY-FSPCVDPKTRLY 677
             A +   M               +                        F+P  DP  +LY
Sbjct: 68   PAENGAAMGKDDVPLDENTTGDDMAEEEQIAMDTDSVEDEVVREIDVCFTPSSDPDNQLY 127

Query: 678  VLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILT 857
            V QYPLR  WRPYEL++RC+EVR++P++ ++E+DL +  DSKN+D  +   V+M+KQ L+
Sbjct: 128  VFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAIDFDSKNFDRDSVHAVKMEKQTLS 187

Query: 858  TSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1031
            TSW P  +  SGYAVGVL G++LHLNPIHAV QLRP  +H+   E K K++  S+   TV
Sbjct: 188  TSWMPLSTCTSGYAVGVLIGDELHLNPIHAVVQLRPSQQHLKESELKKKNIATSSDGKTV 247

Query: 1032 KSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 1211
            + ++ +E                 KD EE WV LKYHGA SD++ RYLQ+M   E S + 
Sbjct: 248  EKKDVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEMAMEEGSPVP 307

Query: 1212 FSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLI 1391
            FSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL 
Sbjct: 308  FSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLA 366

Query: 1392 QDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQL 1571
             D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK    
Sbjct: 367  LDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVF 426

Query: 1572 PNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIN 1748
                    A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K IN
Sbjct: 427  ARRLDFLKAAKPTLKSLAVERPDLIDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQIN 486

Query: 1749 DTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFK 1925
              + GGRN P  K+   +N          T     +   RT+MSE+ REA+ KALQK+F+
Sbjct: 487  GILSGGRNRPALKNPLNSNDNIPALPGGGTPAPGSLL--RTSMSEKTREALPKALQKVFR 544

Query: 1926 SVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVAVNIHG 2102
              K CSFQQI Q LRD+AVSES +  G A++A+ AANS+ DA P+E+Q +INQVAVNIHG
Sbjct: 545  IYKACSFQQIRQRLRDVAVSESQK--GDAKKAITAANSVNDAPPEEIQAVINQVAVNIHG 602

Query: 2103 ICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQ 2282
            + V KSSPDNPQYD  RKVVIDL +AE P+AKLKKA+++EA+K++L R+I+ IE++KV+Q
Sbjct: 603  VYVLKSSPDNPQYDALRKVVIDLLMAEGPSAKLKKASVVEAAKLQLNRDITDIEFKKVMQ 662

Query: 2283 ELCLSQGSAWILRSAGGNT 2339
            ELC S+ SAW+LRS  G++
Sbjct: 663  ELCESKNSAWVLRSGDGSS 681


>ref|XP_009608223.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
            [Nicotiana tomentosiformis]
          Length = 681

 Score =  576 bits (1485), Expect = 0.0
 Identities = 328/679 (48%), Positives = 433/679 (63%), Gaps = 7/679 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVP-KKEELGIKSDIKPE 500
            GPSK   RP+RFAPK SK KP+P  +P    +P    S    P+P KKEEL  K  +K  
Sbjct: 10   GPSKASTRPSRFAPKSSKLKPQP--QPVTKPKPETPLSSSDPPIPTKKEELFSKPSVKDH 67

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXX-YFSPCVDPKTRLY 677
             A +   +               +                       +F+P  DP ++LY
Sbjct: 68   PAENGAAVGKDDVPLDENTTGDDVSEEEQVAMDTDSVDDEVVREIDVFFTPSSDPNSQLY 127

Query: 678  VLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILT 857
            V QYPLR  WRPYEL++RC+EVR++P++ ++E+DL V +DSKN+D  +   V+M+KQ L+
Sbjct: 128  VFQYPLRPVWRPYELEERCQEVRLRPSTAQMEVDLAVDLDSKNFDRDSVHAVKMEKQTLS 187

Query: 858  TSWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1031
            TSW P  +  SGYAVGVL G+KLHLNPIHAV QLRP  +H+   E K K++  S+   TV
Sbjct: 188  TSWMPLSTCTSGYAVGVLIGDKLHLNPIHAVVQLRPSQQHLKESELK-KNIATSSDGKTV 246

Query: 1032 KSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQIS 1211
            +++E +E                 KD EE WV LKYHGA SD++ RYLQ++   E S +S
Sbjct: 247  ENKEVEEKKPAGPSKKQNKPPGNDKDIEEHWVHLKYHGARSDISARYLQEIAMAEGSPVS 306

Query: 1212 FSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLI 1391
            FSMS  DYLN++CPG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL 
Sbjct: 307  FSMSPVDYLNAVCPGRPTDTDRLKILRTR-LSQLPLEERIRTWLLEGPPIHRFDALKHLA 365

Query: 1392 QDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQL 1571
             D+ V+E+LRVLQ +A++VQGLWVPKSSL+YG + G++VLAR+++L  FSK+ IIK    
Sbjct: 366  LDDPVDEILRVLQRYAQLVQGLWVPKSSLIYGKNDGLEVLARNFILFEFSKSTIIKQKVF 425

Query: 1572 PNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIN 1748
                    A K  L  LAV+R +  DWKLKE PD  F      VVK+Q        K IN
Sbjct: 426  ARRLDFLKAAKPTLKSLAVERPDLNDWKLKEHPDKKFEVLYGDVVKEQQATWECMGKQIN 485

Query: 1749 DTI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKALQKLFK 1925
              + GGRN P  K+    NP  +  +     +    +  RT+MSE+ REA+ KALQK+F+
Sbjct: 486  GILSGGRNRPAMKNPL--NPNANIPALPGGGKPAPGSLLRTSMSEKTREALPKALQKVFR 543

Query: 1926 SVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVAVNIHG 2102
              K CSFQQI Q LRD+AVSES +  G A++A+ AANS+ DA P+E+Q +INQVAVNIHG
Sbjct: 544  IYKACSFQQIRQRLRDVAVSESQK--GDAKKAITAANSVNDAPPEEIQAVINQVAVNIHG 601

Query: 2103 ICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKVLQ 2282
            + V KSSPDNPQYD  RKVVIDL +AE P+AKLKKA+I+EA+K++L R+I+ IE++KV+Q
Sbjct: 602  VYVLKSSPDNPQYDALRKVVIDLLMAEGPSAKLKKASIVEAAKLQLNRDITDIEFKKVMQ 661

Query: 2283 ELCLSQGSAWILRSAGGNT 2339
            ELC S+ SAW+LRS  G++
Sbjct: 662  ELCESKNSAWVLRSGDGSS 680


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
            protein product [Vitis vinifera]
          Length = 688

 Score =  556 bits (1433), Expect = 0.0
 Identities = 325/689 (47%), Positives = 413/689 (59%), Gaps = 16/689 (2%)
 Frame = +3

Query: 324  GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 500
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 501  YANDAVEMXXXXXXXXXXXXXXXL---MXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTR 671
                A E                    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 672  LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 851
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 852  LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1031
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 1032 K----SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV 1199
            K    +EE   G             EQ  D+ E WVPLKYH + SD + RYLQKM+A + 
Sbjct: 241  KLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDN 300

Query: 1200 SQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDA 1376
            S I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L +GPPVHRF A
Sbjct: 301  SPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSA 360

Query: 1377 LKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVII 1556
            LKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFSK  +I
Sbjct: 361  LKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLI 420

Query: 1557 KDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXX 1733
              SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q       
Sbjct: 421  NYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESL 480

Query: 1734 XKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREA 1895
             K I D I  GGR GP      K        TS  S   T  T      RTAMS E REA
Sbjct: 481  EKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREA 540

Query: 1896 ITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTII 2075
            + KAL+++F+  K+CSFQ I Q LRD+AVS+S       R  V AA   DA  +EL  II
Sbjct: 541  LPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAII 600

Query: 2076 NQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREIS 2255
            ++ A  +HG+ V K+S ++ +++P RKVV+DLF  + PNAKLK+A I+EA+K+ LK+EI+
Sbjct: 601  SKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEIT 659

Query: 2256 QIEYQKVLQELCLSQGSAWILRSAGGNTK 2342
              EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 660  THEYNKVVSELCESRGSLWVLKSGDGKPK 688


>ref|XP_015578439.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Ricinus
            communis]
          Length = 699

 Score =  555 bits (1430), Expect = 0.0
 Identities = 314/692 (45%), Positives = 422/692 (60%), Gaps = 23/692 (3%)
 Frame = +3

Query: 327  PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAF------PVPKKEELGIKSD 488
            PS+ P+RP+++APK +KFKP+PK +P+    P    S          P+ KK E   + +
Sbjct: 10   PSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEEEE 69

Query: 489  IKPEYA----NDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCV 656
            IKP+      N+A                                         +F+P +
Sbjct: 70   IKPKIISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVREIDVFFTPSI 129

Query: 657  DPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQ 836
            D  T+LYV+QYPLR  WRPYELD+RCEEVRVKP S EVE+DLT+  DS N+D     +  
Sbjct: 130  DSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPAQASKYN 188

Query: 837  MKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSN 1016
             KKQ L+TS+ P  V+GYAVGVL GNKLHLNPIHAV QLRP +EHV+S +SK K+   + 
Sbjct: 189  FKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKN--SAT 246

Query: 1017 VNDTVKSEEPQEGXXXXXXXXXXXXXE----QTKDSEEDWVPLKYHGASSDLTERYLQKM 1184
            +N  VK E+  EG             E    Q  DSEE W+ LKYHG+ SD + RYL+KM
Sbjct: 247  LNPEVKLEDSNEGKPIGSSKKQIKRMEVTNNQISDSEECWISLKYHGSKSDFSSRYLEKM 306

Query: 1185 MAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVH 1364
            +A+E S + F+M+  DY++SLCP  S++   SKGP  R LL+LPL ER +  +L+GPPV 
Sbjct: 307  IAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQ 366

Query: 1365 RFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSK 1544
            RF  LKH   D+SVE+VL+VLQ++ ++VQGLW PKSSL++  D   K   RDYVLLLFSK
Sbjct: 367  RFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDANSKQGIRDYVLLLFSK 425

Query: 1545 NVIIKDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXX 1721
            N++I  SQ+    K+   +K  LN+ AV+R +FKDWK KE  D +F+K  P +VKKQ   
Sbjct: 426  NLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEA 485

Query: 1722 XXXXXKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTARTPKVAN-----SRTAMS 1877
                 K ++     R+G     +    P    ++ K        PK+A+     ++T ++
Sbjct: 486  WDNTEKRLSKVFD-RSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTIT 544

Query: 1878 EEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPD 2057
             E REA+ KAL K+F+S K+CSFQ I Q LRD+AVS+S       R AV AA+  DA P+
Sbjct: 545  VETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAASGADAPPE 604

Query: 2058 ELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKME 2237
            ELQ II+QVA NIHG  V KSSP++PQYD  RKV+IDL +A  PNAKLKKA + EA+++ 
Sbjct: 605  ELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLA 664

Query: 2238 LKREISQIEYQKVLQELCLSQGSAWILRSAGG 2333
             KR+++ IEY KV+ + C S+GSAW+L+S  G
Sbjct: 665  FKRDVTNIEYNKVMTDFCESKGSAWVLKSGDG 696


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
            PREDICTED: DNA-directed RNA polymerase III subunit RPC5
            isoform X1 [Vitis vinifera]
          Length = 693

 Score =  553 bits (1425), Expect = 0.0
 Identities = 327/694 (47%), Positives = 414/694 (59%), Gaps = 21/694 (3%)
 Frame = +3

Query: 324  GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 500
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 501  YANDAVEMXXXXXXXXXXXXXXXL---MXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTR 671
                A E                    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 672  LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 851
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 852  LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1031
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 1032 K----SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREV 1199
            K    +EE   G             EQ  D+ E WVPLKYH + SD + RYLQKM+A + 
Sbjct: 241  KLEVSNEEESVGSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDN 300

Query: 1200 SQISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWL-----LQGPPV 1361
            S I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L     LQGPPV
Sbjct: 301  SPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPV 360

Query: 1362 HRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFS 1541
            HRF ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFS
Sbjct: 361  HRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFS 420

Query: 1542 KNVIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXX 1718
            K  +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q  
Sbjct: 421  KGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRR 480

Query: 1719 XXXXXXKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSE 1880
                  K I D I  GGR GP      K        TS  S   T  T      RTAMS 
Sbjct: 481  VWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSA 540

Query: 1881 EVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDE 2060
            E REA+ KAL+++F+  K+CSFQ I Q LRD+AVS+S       R  V AA   DA  +E
Sbjct: 541  ETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEE 600

Query: 2061 LQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMEL 2240
            L  II++ A  +HG+ V K+S ++ +++P RKVV+DLF  + PNAKLK+A I+EA+K+ L
Sbjct: 601  LHAIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIAL 659

Query: 2241 KREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 2342
            K+EI+  EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 660  KKEITTHEYNKVVSELCESRGSLWVLKSGDGKPK 693


>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum tuberosum]
          Length = 669

 Score =  546 bits (1406), Expect = 0.0
 Identities = 312/679 (45%), Positives = 420/679 (61%), Gaps = 9/679 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIK-SDIKPE 500
            GPSK P R +RFAPK SK KP+P+ +P     P +  ++    + KKEEL +  ++    
Sbjct: 7    GPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHSDSAI----LTKKEELSVSLAENGAV 62

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYV 680
              ND V +               +                        +P  DP T+LYV
Sbjct: 63   TGNDDVPLEGETTGNYLGEDEGQVTDSDHDEVVREIDVC--------INPSFDPSTQLYV 114

Query: 681  LQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTT 860
             QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  +     +KKQ+L+T
Sbjct: 115  FQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLST 174

Query: 861  SWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVK 1034
            SW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K+V  +N   +V+
Sbjct: 175  SWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVTTNNDEKSVE 233

Query: 1035 SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISF 1214
            +E+ +E                 KD  E W+ LKYHGA SD++ RYLQKM   E S + F
Sbjct: 234  NEDVKEKRPMGPSKKQNKPPGIEKDIGEHWLHLKYHGARSDISARYLQKMAMEEGSPVPF 293

Query: 1215 SMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQ 1394
            SMS  DYLN+  PG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL  
Sbjct: 294  SMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKHLAP 352

Query: 1395 DESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP 1574
            D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F+K ++IK S   
Sbjct: 353  DNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFG 412

Query: 1575 NN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIND 1751
               +   A    L  LAV+R +  DWKLKE PD  F      VV+++        K IND
Sbjct: 413  RRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQIND 472

Query: 1752 TI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANS---RTAMSEEVREAITKALQKL 1919
             + GGRN P     T  NP    +         K  +S   RT+MSEE+REA+ KALQ++
Sbjct: 473  VLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEV 527

Query: 1920 FKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVAVNI 2096
            F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E+Q +INQVAVNI
Sbjct: 528  FRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNI 587

Query: 2097 HGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKV 2276
            HG+ V KSSPDNPQYD  RKVVIDLF+AE P+AKLKKA++ EA+K++L R+I+ +E+ KV
Sbjct: 588  HGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKV 647

Query: 2277 LQELCLSQGSAWILRSAGG 2333
            ++ELC S+ SAW+LRS  G
Sbjct: 648  MKELCHSEKSAWVLRSGDG 666


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
            [Vitis vinifera]
          Length = 672

 Score =  546 bits (1406), Expect = 0.0
 Identities = 322/687 (46%), Positives = 412/687 (59%), Gaps = 14/687 (2%)
 Frame = +3

Query: 324  GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 500
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 501  YANDAVEMXXXXXXXXXXXXXXXL---MXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTR 671
                A E                    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 672  LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 851
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 852  LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1031
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 1032 KSEEPQEGXXXXXXXXXXXXXEQTKDS--EEDWVPLKYHGASSDLTERYLQKMMAREVSQ 1205
            K E   E              E++  S  ++ WVPLKYH + SD + RYLQKM+A + S 
Sbjct: 241  KLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSP 286

Query: 1206 ISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALK 1382
            I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L +GPPVHRF ALK
Sbjct: 287  IQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALK 346

Query: 1383 HLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKD 1562
            H   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFSK  +I  
Sbjct: 347  HFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINY 406

Query: 1563 SQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXK 1739
            SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q        K
Sbjct: 407  SQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEK 466

Query: 1740 IINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAIT 1901
             I D I  GGR GP      K        TS  S   T  T      RTAMS E REA+ 
Sbjct: 467  QITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALP 526

Query: 1902 KALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQ 2081
            KAL+++F+  K+CSFQ I Q LRD+AVS+S       R  V AA   DA  +EL  II++
Sbjct: 527  KALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISK 586

Query: 2082 VAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQI 2261
             A  +HG+ V K+S ++ +++P RKVV+DLF  + PNAKLK+A I+EA+K+ LK+EI+  
Sbjct: 587  YATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTH 645

Query: 2262 EYQKVLQELCLSQGSAWILRSAGGNTK 2342
            EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 646  EYNKVVSELCESRGSLWVLKSGDGKPK 672


>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
            lycopersicum]
          Length = 669

 Score =  543 bits (1398), Expect = e-179
 Identities = 309/682 (45%), Positives = 420/682 (61%), Gaps = 12/682 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIK-SDIKPE 500
            GPSK P R +RFAPK SK KP+P+ +P     P +  ++      KKEEL +  ++ +  
Sbjct: 7    GPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPQSDSAIST----KKEELTVHLAENRAV 62

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYV 680
              ND V +               +                        +P  DP T+LYV
Sbjct: 63   TGNDDVPLEGETTGNDLGEDEEQVTDSDHDEIVREIDVC--------INPSFDPSTQLYV 114

Query: 681  LQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTT 860
             QYPL+  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  +     +KKQ+L+T
Sbjct: 115  FQYPLKAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATVKKQMLST 174

Query: 861  SWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVK 1034
            SW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K++  +N   +V+
Sbjct: 175  SWIPLPTCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNIITNNDEKSVE 233

Query: 1035 SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISF 1214
            +E+ +E                 KD  E W+ LKYHGA SD++ RYLQKM   E S + F
Sbjct: 234  NEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQKMSMEEGSPVPF 293

Query: 1215 SMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQ 1394
            SMS  DYLN+ CPG  +D    K    R L  LPL+ER R WLL+GPP+HRFDAL HL  
Sbjct: 294  SMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGPPIHRFDALMHLAP 352

Query: 1395 DESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP 1574
            D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F+K ++IK S   
Sbjct: 353  DNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFG 412

Query: 1575 NN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIND 1751
               +   A    L  LAV+R +  DWKLKE PD  F      VV++Q        K IND
Sbjct: 413  RRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQIND 472

Query: 1752 TI-GGRNGPGKKS------DTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITKAL 1910
             + GGR  P  K+      D T  P+  K +S    RT        +MSEE+REA+ KAL
Sbjct: 473  VLPGGRTRPTMKNPINRNADITALPSGDKPTSSSLLRT--------SMSEEIREALPKAL 524

Query: 1911 QKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVA 2087
            Q++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E+Q +INQVA
Sbjct: 525  QEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVA 584

Query: 2088 VNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEY 2267
            VNIHG+ V KSSPDNPQYD  RK+VIDLF+AE P+AKLKKA++ EA+K++L R+I+ +E+
Sbjct: 585  VNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEF 644

Query: 2268 QKVLQELCLSQGSAWILRSAGG 2333
             KV++ELC S+ SAW+LRS  G
Sbjct: 645  LKVMKELCHSEKSAWVLRSGDG 666


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
            [Vitis vinifera]
          Length = 677

 Score =  543 bits (1398), Expect = e-179
 Identities = 324/692 (46%), Positives = 413/692 (59%), Gaps = 19/692 (2%)
 Frame = +3

Query: 324  GPSKGP-NRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE 500
            GP++ P  RP+RFAPK SK K  PK EPS   +PS  D V    + KKEE     D +P 
Sbjct: 8    GPNRAPVRRPSRFAPKSSKPKLIPKPEPSSQPEPSKLDDVTL--INKKEE-----DSQPP 60

Query: 501  YANDAVEMXXXXXXXXXXXXXXXL---MXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTR 671
                A E                    +                     +  P  D  T+
Sbjct: 61   LVKKADEPFASSTQNGVIEMEVEAKAEVEDAMEEDDRDEDPVVREIDVFFTPPPTDDNTK 120

Query: 672  LYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQI 851
            +YVLQYPLR  WRPYEL +RC+EVRVKPAS EVE+DL++ VDSKNYD  A    +MKKQ 
Sbjct: 121  IYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQT 180

Query: 852  LTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTV 1031
            L+TSW+P   +GY VGVL GNKLHLNPIHAV QLRP ME++ S  +K K+    + N  V
Sbjct: 181  LSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAV 240

Query: 1032 KSEEPQEGXXXXXXXXXXXXXEQTKDS--EEDWVPLKYHGASSDLTERYLQKMMAREVSQ 1205
            K E   E              E++  S  ++ WVPLKYH + SD + RYLQKM+A + S 
Sbjct: 241  KLEVSNE--------------EESVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSP 286

Query: 1206 ISFSMSSNDYLNSLC-PGTSSDGFSSKGPSIRVLLTLPLKERFRTWL-----LQGPPVHR 1367
            I F MS  +Y+NSLC PG S+D   SKG S R LL++PL+ERF+T L     LQGPPVHR
Sbjct: 287  IQFLMSPYEYVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHR 346

Query: 1368 FDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKN 1547
            F ALKH   D SVE+VL VL  HA +VQGLWVPKSSL++   QG+  LARDY+LLLFSK 
Sbjct: 347  FSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKG 406

Query: 1548 VIIKDSQLP-NNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXX 1724
             +I  SQ+     L  A+K  L++LAV+R +F+DWK KE  D SF+K +P +V++Q    
Sbjct: 407  PLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVW 466

Query: 1725 XXXXKIINDTI--GGRNGP----GKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEV 1886
                K I D I  GGR GP      K        TS  S   T  T      RTAMS E 
Sbjct: 467  ESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAET 526

Query: 1887 REAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQ 2066
            REA+ KAL+++F+  K+CSFQ I Q LRD+AVS+S       R  V AA   DA  +EL 
Sbjct: 527  REALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELH 586

Query: 2067 TIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKR 2246
             II++ A  +HG+ V K+S ++ +++P RKVV+DLF  + PNAKLK+A I+EA+K+ LK+
Sbjct: 587  AIISKYATTVHGVYVWKTS-EHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKK 645

Query: 2247 EISQIEYQKVLQELCLSQGSAWILRSAGGNTK 2342
            EI+  EY KV+ ELC S+GS W+L+S  G  K
Sbjct: 646  EITTHEYNKVVSELCESRGSLWVLKSGDGKPK 677


>ref|XP_015083434.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X1 [Solanum pennellii]
          Length = 670

 Score =  541 bits (1395), Expect = e-179
 Identities = 311/681 (45%), Positives = 420/681 (61%), Gaps = 11/681 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIK-SDIKPE 500
            GPSK P R +RFAPK SK KP+P+ +P     P +  ++      KKEEL +  ++    
Sbjct: 7    GPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPQSDSAIST----KKEELTVHLAENGAV 62

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYV 680
              ND V +               +                        +P  DP T+LYV
Sbjct: 63   TGNDDVPLEGETTGNDLGEDEEQVTDSDHDEVVREIDVC--------INPSFDPSTQLYV 114

Query: 681  LQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTT 860
             QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  +     +KKQ+L+T
Sbjct: 115  FQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLST 174

Query: 861  SWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVK 1034
            SW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K+V  +N   +V+
Sbjct: 175  SWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVITNNDEKSVE 233

Query: 1035 SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISF 1214
            +E+ +E                 KD  E W+ LKYHGA SD++ RYLQKM   E S + F
Sbjct: 234  NEDVKEKRPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQKMAMEEGSPVPF 293

Query: 1215 SMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQ 1394
            SMS  DYLN+ CPG  +D    K    R L  LPL+ER R WLL+GPP+HRFDAL HL  
Sbjct: 294  SMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGPPIHRFDALMHLAP 352

Query: 1395 DESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP 1574
            D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F+K ++IK S   
Sbjct: 353  DNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFG 412

Query: 1575 NN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIND 1751
               +   A    L  LAV+R +  DWKLKE PD  F      VV++Q        K IND
Sbjct: 413  RRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQIND 472

Query: 1752 TIGGRNGPGKKSDTTTNPATSKSSSKVTARTP---KVANS---RTAMSEEVREAITKALQ 1913
             + G    G+   T  NP    +   +TA  P   K  +S   RT+MSEE+REA+ KALQ
Sbjct: 473  VLPG----GRTRPTMKNPINRDAD--ITALPPSGDKPTSSSLLRTSMSEEIREALPKALQ 526

Query: 1914 KLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVAV 2090
            ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E+Q +INQVAV
Sbjct: 527  EVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVAV 586

Query: 2091 NIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQ 2270
            NIHG+ V KSSPDNPQYD  RK+VIDLF+AE P+AKLKKA++ EA+K++L R+I+ +E+ 
Sbjct: 587  NIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFL 646

Query: 2271 KVLQELCLSQGSAWILRSAGG 2333
            KV++ELC S+ SAW+LRS  G
Sbjct: 647  KVMKELCHSEKSAWVLRSGDG 667


>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum tuberosum]
          Length = 657

 Score =  539 bits (1389), Expect = e-178
 Identities = 309/679 (45%), Positives = 419/679 (61%), Gaps = 9/679 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIK-SDIKPE 500
            GPSK P R +RFAPK SK KP+P+ +P     P +  ++    + KKEEL +  ++    
Sbjct: 7    GPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPHSDSAI----LTKKEELSVSLAENGAV 62

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYV 680
              ND V +               +                        +P  DP T+LYV
Sbjct: 63   TGNDDVPLEGETTGNYLGEDEGQVTDSDHDEVVREIDVC--------INPSFDPSTQLYV 114

Query: 681  LQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTT 860
             QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  +     +KKQ+L+T
Sbjct: 115  FQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLST 174

Query: 861  SWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVK 1034
            SW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K+V  +N   +V+
Sbjct: 175  SWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVTTNNDEKSVE 233

Query: 1035 SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISF 1214
            +E+ +E                    ++ W+ LKYHGA SD++ RYLQKM   E S + F
Sbjct: 234  NEDVKE------------KRPMGPSKKQHWLHLKYHGARSDISARYLQKMAMEEGSPVPF 281

Query: 1215 SMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQ 1394
            SMS  DYLN+  PG  +D    K    R L  LPL+ER RTWLL+GPP+HRFDALKHL  
Sbjct: 282  SMSPVDYLNAFFPGRPTDTDRLKILRTR-LSQLPLEERVRTWLLEGPPIHRFDALKHLAP 340

Query: 1395 DESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP 1574
            D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F+K ++IK S   
Sbjct: 341  DNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFG 400

Query: 1575 NN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIND 1751
               +   A    L  LAV+R +  DWKLKE PD  F      VV+++        K IND
Sbjct: 401  RRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQIND 460

Query: 1752 TI-GGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANS---RTAMSEEVREAITKALQKL 1919
             + GGRN P     T  NP    +         K  +S   RT+MSEE+REA+ KALQ++
Sbjct: 461  VLPGGRNRP-----TMKNPLNPNADIPALPSGDKPTSSSLLRTSMSEEIREALPKALQEV 515

Query: 1920 FKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVAVNI 2096
            F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E+Q +INQVAVNI
Sbjct: 516  FRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVAVNI 575

Query: 2097 HGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQKV 2276
            HG+ V KSSPDNPQYD  RKVVIDLF+AE P+AKLKKA++ EA+K++L R+I+ +E+ KV
Sbjct: 576  HGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKV 635

Query: 2277 LQELCLSQGSAWILRSAGG 2333
            ++ELC S+ SAW+LRS  G
Sbjct: 636  MKELCHSEKSAWVLRSGDG 654


>ref|XP_015083435.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
            X2 [Solanum pennellii]
          Length = 658

 Score =  535 bits (1377), Expect = e-176
 Identities = 308/681 (45%), Positives = 419/681 (61%), Gaps = 11/681 (1%)
 Frame = +3

Query: 324  GPSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIK-SDIKPE 500
            GPSK P R +RFAPK SK KP+P+ +P     P +  ++      KKEEL +  ++    
Sbjct: 7    GPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPQSDSAIST----KKEELTVHLAENGAV 62

Query: 501  YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCVDPKTRLYV 680
              ND V +               +                        +P  DP T+LYV
Sbjct: 63   TGNDDVPLEGETTGNDLGEDEEQVTDSDHDEVVREIDVC--------INPSFDPSTQLYV 114

Query: 681  LQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQMKKQILTT 860
             QYPLR  WRPYEL++RC+EVR++P++ E+E+DL + +DSKN+D  +     +KKQ+L+T
Sbjct: 115  FQYPLRAVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATIKKQMLST 174

Query: 861  SWEP--SHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSNVNDTVK 1034
            SW P  +  SGYAVGVL G+KLHLNP+HAV QLRP   ++   E K K+V  +N   +V+
Sbjct: 175  SWMPLPTCASGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELK-KNVITNNDEKSVE 233

Query: 1035 SEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAREVSQISF 1214
            +E+ +E                    ++ W+ LKYHGA SD++ RYLQKM   E S + F
Sbjct: 234  NEDVKEKRPVGP------------SKKQHWLHLKYHGARSDISARYLQKMAMEEGSPVPF 281

Query: 1215 SMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDALKHLIQ 1394
            SMS  DYLN+ CPG  +D    K    R L  LPL+ER R WLL+GPP+HRFDAL HL  
Sbjct: 282  SMSPVDYLNAFCPGRPTDTDRLKILRTR-LSQLPLEERVRIWLLEGPPIHRFDALMHLAP 340

Query: 1395 DESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVIIKDSQLP 1574
            D S +E++RVLQ +A++VQGLWVPKSSLVYGT+ G++VLAR++VL  F+K ++IK S   
Sbjct: 341  DNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFG 400

Query: 1575 NN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXXXKIIND 1751
               +   A    L  LAV+R +  DWKLKE PD  F      VV++Q        K IND
Sbjct: 401  RRPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQIND 460

Query: 1752 TIGGRNGPGKKSDTTTNPATSKSSSKVTARTP---KVANS---RTAMSEEVREAITKALQ 1913
             + G    G+   T  NP    +   +TA  P   K  +S   RT+MSEE+REA+ KALQ
Sbjct: 461  VLPG----GRTRPTMKNPINRDAD--ITALPPSGDKPTSSSLLRTSMSEEIREALPKALQ 514

Query: 1914 KLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSI-DAYPDELQTIINQVAV 2090
            ++F++ K+CSFQQI Q LR + VS+S    G  R+A+ A+  + DA  +E+Q +INQVAV
Sbjct: 515  EVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVAV 574

Query: 2091 NIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIEYQ 2270
            NIHG+ V KSSPDNPQYD  RK+VIDLF+AE P+AKLKKA++ EA+K++L R+I+ +E+ 
Sbjct: 575  NIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFL 634

Query: 2271 KVLQELCLSQGSAWILRSAGG 2333
            KV++ELC S+ SAW+LRS  G
Sbjct: 635  KVMKELCHSEKSAWVLRSGDG 655


>ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis melo]
          Length = 702

 Score =  532 bits (1371), Expect = e-175
 Identities = 310/696 (44%), Positives = 405/696 (58%), Gaps = 25/696 (3%)
 Frame = +3

Query: 330  SKGPNRPARFAPKGSKFKPRPKIE---------PSQSLQPSASDSVEAFPVP-----KKE 467
            S+ P+R +RFAPK SKFKP+PK E         P   L+P    S      P     +K+
Sbjct: 10   SQVPSRTSRFAPKSSKFKPKPKSEVVPKPEPQQPPTKLEPQPPVSKPEVVEPDAQIGEKK 69

Query: 468  ELGIKSDIKPEYANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFS 647
            E G + ++KP+  +                     M                      F+
Sbjct: 70   EDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTMVDDDPMEEDASEDMVVREIDVLFT 129

Query: 648  PCVDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADP 827
            P VD  ++LYVLQYPLR +WRPYE + RC+EVRVKP++ EVEIDL V ++S NYDS AD 
Sbjct: 130  PSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEIDLNVDIESNNYDSKADD 189

Query: 828  RVQMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVG 1007
              QMKKQ LT+SW+P   + YAVG+L GNKLHLNP+HAV QLRP  EH++S   K K+  
Sbjct: 190  TFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQLRPSFEHLNSGGPKRKN-- 247

Query: 1008 PSNVNDTVKSEEPQE----GXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYL 1175
                +  VKSEE  +    G             E     EE W+PLKY+G  SDL+ R+L
Sbjct: 248  NIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDEECWIPLKYYGLESDLSTRHL 307

Query: 1176 QKMMAREVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGP 1355
            Q M+++ VS + FSMS +DY++SLCPGTS+     KGPS + LL+L L+ER +  L +GP
Sbjct: 308  QSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPSKKYLLSLSLEERIKKLLTEGP 367

Query: 1356 PVHRFDALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLL 1535
            PV RF ALKH   D   EE L  LQ +A++VQGLWVPKS  +   D G    ARD+VL L
Sbjct: 368  PVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKSLFLIPQD-GSGRCARDFVLFL 426

Query: 1536 FSKNVIIKDSQLPNNK-LAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQ 1712
            FSKN ++  SQ+   K L   +K  LN+  V+R  FKDWK KE  D SF+ ++  +V+KQ
Sbjct: 427  FSKNPVVSSSQINVPKSLRDRVKHFLNLFGVERPAFKDWKFKEKTDHSFLSNHVKIVQKQ 486

Query: 1713 XXXXXXXXKIINDTIGGRNGPGK-----KSDTTTNPATSKSSSKVTARTPKVA-NSRTAM 1874
                    K +      ++GP       K D    P    S  K T ++     N + AM
Sbjct: 487  EEGWNAMEKALPFLRSMKSGPHTTATTGKPDVVPKPEKQVSCDKTTTKSSNAPLNRKGAM 546

Query: 1875 SEEVREAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYP 2054
            S+E REA+ KALQKLF++ K+CSFQ I Q LRD+AVS+S      AR AV AA  +DA P
Sbjct: 547  SDETREALPKALQKLFQNHKVCSFQLICQGLRDLAVSQSTLPKADARMAVAAAYGVDAPP 606

Query: 2055 DELQTIINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKM 2234
            +EL+ II+QVA  IHG+ V  SSP++P+YDP RKVVI L     P A LKKA +LEASK 
Sbjct: 607  EELKKIISQVATEIHGLYVLTSSPEHPEYDPLRKVVIQLLRGRGPKAVLKKADVLEASKR 666

Query: 2235 ELKREISQIEYQKVLQELCLSQGSAWILRSAGGNTK 2342
            EL R I+  EY KV+ E+C+S GS+W L+S  GN++
Sbjct: 667  ELGRAINSNEYSKVMNEICVSHGSSWTLKSGDGNSR 702


>ref|XP_011025735.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Populus
            euphratica]
          Length = 666

 Score =  531 bits (1367), Expect = e-175
 Identities = 300/683 (43%), Positives = 403/683 (59%), Gaps = 14/683 (2%)
 Frame = +3

Query: 327  PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAFPVPKKEELGIKSDIKPE-- 500
            PSK    P+RFAP   K +P+PK +P    +P   +SV   P P         D KP+  
Sbjct: 9    PSKVRKPPSRFAPTSKKPQPKPKPKP----KPEPQESVPVAPKPDHSVSNTAEDAKPKTD 64

Query: 501  ---------YANDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPC 653
                      +N  V+M                                      Y++P 
Sbjct: 65   DTLSKTETGVSNGNVKMEIDAKEERGAAVKENDPMDVDKEEDEDEDDVVVREIDVYYTPS 124

Query: 654  VDPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRV 833
            VDP T+LYV+QYPLR  WRPYELD+RC+EVRVKP S EVE+DL++  D+KNYD     R+
Sbjct: 125  VDPNTQLYVMQYPLRPCWRPYELDERCKEVRVKPQSAEVEVDLSID-DTKNYDPDIASRL 183

Query: 834  QMKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPS 1013
             MKKQ L++SW P   +GYAVGVL GNKLHLNPIHAV QLRP M+++ S  SK K    S
Sbjct: 184  NMKKQTLSSSWSPPPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATS 243

Query: 1014 NVNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMAR 1193
              +    +E    G             EQ  D EE W+PLKYHG+ SDL+ RYLQ M+A 
Sbjct: 244  GEDS---NEGKPLGLPKKQSKQMSSGNEQKPDVEESWIPLKYHGSKSDLSARYLQNMVAP 300

Query: 1194 EVSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFD 1373
            E S I F+MS  DY++SLCPG S++     GPS RVLL+LPL+ER +   L+GPP+HRF 
Sbjct: 301  ESSTIEFAMSPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFA 360

Query: 1374 ALKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGT---DQGIKVLARDYVLLLFSK 1544
            AL+HLI ++S+E++L VLQ++ ++VQGLWVPK+SL++      + +K+ ARDY+LLLFSK
Sbjct: 361  ALRHLIPNDSIEDLLIVLQEYGQLVQGLWVPKTSLLFPNPKPTEKVKLAARDYILLLFSK 420

Query: 1545 NVIIKDSQLPNNKLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXX 1724
            ++++  S+L        +K  LN+ AV+R +FKDWK KE  D  FV+  P +V+KQ    
Sbjct: 421  SLVVTPSELNVPMKPLILKSFLNIFAVERPSFKDWKFKENVDTLFVELYPDIVRKQEQAW 480

Query: 1725 XXXXKIINDTIGGRNGPGKKSDTTTNPATSKSSSKVTARTPKVANSRTAMSEEVREAITK 1904
                K I+                      KS SK     PK       M++E REA+ K
Sbjct: 481  EVMGKNISAAF---------------DRAGKSVSKNVITKPK-----KTMTDETREALRK 520

Query: 1905 ALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQTIINQV 2084
            AL K+ ++ K+CSFQ I Q LR +A+S+S       R AV AA+  +A P+ELQ +I++V
Sbjct: 521  ALPKVLQTHKVCSFQMICQGLRQLAISQSTLPKADPRIAVAAASGAEAPPEELQEVISEV 580

Query: 2085 AVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKREISQIE 2264
            A NIHG  V KSSP++P +DP RKVVI LF+A  PNA +KK+ +  A+++ELKRE S  E
Sbjct: 581  ATNIHGFYVLKSSPEHPDFDPLRKVVIGLFLARGPNANIKKSEVQAAARLELKREPSNSE 640

Query: 2265 YQKVLQELCLSQGSAWILRSAGG 2333
            Y KV+ +LC S+GSAW+L+S  G
Sbjct: 641  YIKVMTDLCESKGSAWVLKSGDG 663


>gb|EEF37239.1| DNA-directed RNA polymerase, putative [Ricinus communis]
          Length = 677

 Score =  522 bits (1345), Expect = e-171
 Identities = 298/669 (44%), Positives = 404/669 (60%), Gaps = 19/669 (2%)
 Frame = +3

Query: 327  PSKGPNRPARFAPKGSKFKPRPKIEPSQSLQPSASDSVEAF------PVPKKEELGIKSD 488
            PS+ P+RP+++APK +KFKP+PK +P+    P    S          P+ KK E   + +
Sbjct: 10   PSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEEEE 69

Query: 489  IKPEYA----NDAVEMXXXXXXXXXXXXXXXLMXXXXXXXXXXXXXXXXXXXXXYFSPCV 656
            IKP+      N+A                                         +F+P +
Sbjct: 70   IKPKIISTPKNEAWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVREIDVFFTPSI 129

Query: 657  DPKTRLYVLQYPLRQQWRPYELDQRCEEVRVKPASREVEIDLTVYVDSKNYDSGADPRVQ 836
            D  T+LYV+QYPLR  WRPYELD+RCEEVRVKP S EVE+DLT+  DS N+D     +  
Sbjct: 130  DSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTID-DSSNWDPAQASKYN 188

Query: 837  MKKQILTTSWEPSHVSGYAVGVLTGNKLHLNPIHAVAQLRPLMEHVDSKESKSKSVGPSN 1016
             KKQ L+TS+ P  V+GYAVGVL GNKLHLNPIHAV QLRP +EHV+S +SK K+   + 
Sbjct: 189  FKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKN--SAT 246

Query: 1017 VNDTVKSEEPQEGXXXXXXXXXXXXXEQTKDSEEDWVPLKYHGASSDLTERYLQKMMARE 1196
            +N  VK E+  EG                   ++ W+ LKYHG+ SD + RYL+KM+A+E
Sbjct: 247  LNPEVKLEDSNEGKPIG------------SSKKQCWISLKYHGSKSDFSSRYLEKMIAQE 294

Query: 1197 VSQISFSMSSNDYLNSLCPGTSSDGFSSKGPSIRVLLTLPLKERFRTWLLQGPPVHRFDA 1376
             S + F+M+  DY++SLCP  S++   SKGP  R LL+LPL ER +  +L+GPPV RF  
Sbjct: 295  SSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSV 354

Query: 1377 LKHLIQDESVEEVLRVLQDHARVVQGLWVPKSSLVYGTDQGIKVLARDYVLLLFSKNVII 1556
            LKH   D+SVE+VL+VLQ++ ++VQGLW PKSSL++  D   K   RDYVLLLFSKN++I
Sbjct: 355  LKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLF-PDANSKQGIRDYVLLLFSKNLVI 413

Query: 1557 KDSQLPNN-KLAPAMKDVLNVLAVKRDNFKDWKLKELPDFSFVKSNPSVVKKQXXXXXXX 1733
              SQ+    K+   +K  LN+ AV+R +FKDWK KE  D +F+K  P +VKKQ       
Sbjct: 414  NSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTTFIKLYPDIVKKQEEAWDNT 473

Query: 1734 XKIINDTIGGRNGPGKKSDTTTNPATSKSSSK---VTARTPKVAN-----SRTAMSEEVR 1889
             K ++     R+G     +    P    ++ K        PK+A+     ++T ++ E R
Sbjct: 474  EKRLSKVFD-RSGKASMKNAIPKPPMVHNTVKHLDSEKSMPKIASGMRRLTKTTITVETR 532

Query: 1890 EAITKALQKLFKSVKICSFQQISQLLRDMAVSESARSTGFAREAVVAANSIDAYPDELQT 2069
            EA+ KAL K+F+S K+CSFQ I Q LRD+AVS+S       R AV AA+  DA P+ELQ 
Sbjct: 533  EALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADPRIAVAAASGADAPPEELQE 592

Query: 2070 IINQVAVNIHGICVPKSSPDNPQYDPFRKVVIDLFVAEVPNAKLKKATILEASKMELKRE 2249
            II+QVA NIHG  V KSSP++PQYD  RKV+IDL +A  PNAKLKKA + EA+++  KR+
Sbjct: 593  IISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPNAKLKKAEVFEAARLAFKRD 652

Query: 2250 ISQIEYQKV 2276
            ++ IEY K+
Sbjct: 653  VTNIEYNKL 661