BLASTX nr result
ID: Rehmannia27_contig00003890
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00003890
(3012 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 167 e-131
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 163 e-127
gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposo... 167 e-122
ref|XP_013664987.1| PREDICTED: uncharacterized protein LOC106369... 163 e-102
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 144 9e-96
ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotei... 153 3e-85
ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotei... 153 3e-85
ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotei... 153 3e-85
ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotei... 153 3e-85
ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotei... 153 3e-85
ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotei... 153 8e-84
gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposo... 163 2e-82
gb|KYP41280.1| Retrovirus-related Pol polyprotein from transposo... 155 7e-81
gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposo... 150 7e-81
gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposo... 155 9e-81
ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794... 168 2e-80
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 177 3e-80
gb|KYP61781.1| Retrovirus-related Pol polyprotein from transposo... 158 3e-80
emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera] 165 4e-80
gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposo... 152 1e-79
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 167 bits (424), Expect(7) = e-131
Identities = 112/313 (35%), Positives = 163/313 (52%), Gaps = 10/313 (3%)
Frame = +1
Query: 796 VTKEVHFVETEFPSYNK----STETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLD 963
V++ V F E FPS+ K S +P+PI YN D
Sbjct: 680 VSRNVLFHEDHFPSFTKPHSPSFSSPVPI------HYNYVDYPTFPSSSIVESSDPPTSD 733
Query: 964 LHI---PHRKAPRHITKPFRFNDF--VTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTF 1125
H P R++ R P DF + + +T + L LS L SF +
Sbjct: 734 QHSSPPPLRRSTRPRRPPTYLQDFHGAFTSTSTAHSSTGIRHPLHSFLSYDLLSPSFHHY 793
Query: 1126 VSSLDTVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVY 1305
V S+ +V+ EP + A+ASK W++ M++E+ A AIGC+WVY
Sbjct: 794 VFSISSVT---EPKNFAEASKSDSWLKAMHEEIFALEANNTWVLTTLPPHKTAIGCRWVY 850
Query: 1306 KIKMHPNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQL 1485
K+K +G+++R+K+RLVAKGY + G+D+ D+FSPVAKL T+R+L+ +A++ L QL
Sbjct: 851 KVKHKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLLSLAAINNWHLKQL 910
Query: 1486 DINNAFVHSFLNEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYG 1665
D+NNAF+H LNE +YM G G+VC L+ SLYGLK A RQW + + L +G
Sbjct: 911 DVNNAFLHGDLNEEVYMQLPPGLTPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHG 970
Query: 1666 FIQSPHDTFLFIK 1704
++ SP D LF+K
Sbjct: 971 YVPSPSDHSLFLK 983
Score = 131 bits (330), Expect(7) = e-131
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDD++R W +L+ +K++ + FI + QF +K RTDNG EF TQ F
Sbjct: 491 IVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKHVKVIRTDNGLEFSMTQ---YFS 547
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
+ GIIHQ + V TP QNGI+ERKH+HLL+ R +LF +NLP FW F+L+ A +LIN +P
Sbjct: 548 SKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALMHATFLINCIP 607
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTFDTNI 689
+ LH +P+E Y P +L F CL + + I
Sbjct: 608 TPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTI 642
Score = 91.3 bits (225), Expect(7) = e-131
Identities = 50/106 (47%), Positives = 66/106 (62%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+LIYVDD+ ++ G DL I +L L F IKDLG YF G+E+AR TG +L QRK+
Sbjct: 992 ILIYVDDI-VLAGNDLTEIHHLTSLLHTTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKY 1050
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
+LD+LS G+L K V++P + L G PLT+ YR LVGR
Sbjct: 1051 ILDLLSDTGMLASKPVSTPMDYSMHLSASSGTPLTDTAAYRRLVGR 1096
Score = 90.1 bits (222), Expect(7) = e-131
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDI-------SQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR DI SQFV+NP ++H A +LRYLKG G+F S S L A
Sbjct: 1097 LIYLTNTRPDITYAVQQLSQFVSNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRA 1156
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKKNI 2317
+SD D A C D RRSI G+ V+LG+ L+SWK+KK I
Sbjct: 1157 FSDSDWAGCPDTRRSITGFAVYLGDSLISWKSKKQI 1192
Score = 43.1 bits (100), Expect(7) = e-131
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +2
Query: 689 ILPQKTKFDSRAHKCIFLVYELGQKGYELFNLVTHRL 799
I +TK D RAH CIFL ++ KGY LFNL TH L
Sbjct: 642 ITSHRTKLDPRAHPCIFLGFKPHTKGYLLFNLHTHGL 678
Score = 41.2 bits (95), Expect(7) = e-131
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 77 NCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
+C+ CH +KQ + FP ++AS F+L+H+D+WG
Sbjct: 441 SCNTCHHAKQKKLPFPLSHSYASQPFDLLHMDIWG 475
Score = 40.8 bits (94), Expect(7) = e-131
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK VSRSS E EYRAL +T CE+Q +++L + P LY N
Sbjct: 1189 KKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDPISPSILYCDN 1237
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 163 bits (413), Expect(7) = e-127
Identities = 106/310 (34%), Positives = 160/310 (51%), Gaps = 7/310 (2%)
Frame = +1
Query: 796 VTKEVHFVETEFPSYNK----STETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLD 963
V++ V F E FPS+ K S +P+PI YN D
Sbjct: 501 VSQNVIFHEDHFPSFTKPNSPSFSSPVPIP------YNYADYPSFPSSSIVESSEPPPPD 554
Query: 964 LHI---PHRKAPRHITKPFRFNDFVTCNITNL*PTTAVPDGLPRLSLTALPFSFSTFVSS 1134
H P R++ R P DF T+ P ++ P S + +F
Sbjct: 555 QHSSPPPLRRSTRPRRPPTYLQDFHGA-FTSTGPHSSTGIRHPLHSFISYDRLSPSFHHY 613
Query: 1135 LDTVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIK 1314
+ ++S++ +P + +ASK W++ M++E+ A AIGC+WVYK+K
Sbjct: 614 VFSISSVTKPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKVK 673
Query: 1315 MHPNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDIN 1494
+G+++R+K+RLVAKGY + G+D+ D+FSPVAKL T+R+LI +A++ L QLD+N
Sbjct: 674 HKADGSIDRYKARLVAKGYTQMEGLDFFDTFSPVAKLTTVRLLISLAAIHNCHLKQLDVN 733
Query: 1495 NAFVHSFLNEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQ 1674
N+F+H LNE +YM G G+VC L+ SLYGLK A RQW + + L +G++
Sbjct: 734 NSFLHGDLNEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVP 793
Query: 1675 SPHDTFLFIK 1704
SP D LF+K
Sbjct: 794 SPSDHSLFLK 803
Score = 132 bits (331), Expect(7) = e-127
Identities = 68/155 (43%), Positives = 95/155 (61%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDD++R W +L+ +K++ + FI + QF +K RTDNG EF TQ F
Sbjct: 312 IVDDHTRFTWLFLMQNKSETRQHIINFINQVETQFDKNVKVIRTDNGLEFSMTQ---YFS 368
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
+ GIIHQ + V TP QNGI+ERKH+HLL+ R +LF +NLP FW F+L A +LIN +P
Sbjct: 369 SKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLINCIP 428
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTFDTNI 689
+ LH +P+E Y P +LR F CL + + I
Sbjct: 429 TPFLHNISPFEKLYGHPCDISILRVFGCLCYSSII 463
Score = 88.2 bits (217), Expect(7) = e-127
Identities = 49/106 (46%), Positives = 64/106 (60%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+LIYVDD+ ++ G DL I +L L + F IKDLG YF G+E+AR TG +L QRK+
Sbjct: 812 ILIYVDDI-VLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKY 870
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
LD+LS G+L K V++P L G P T+ YR LVGR
Sbjct: 871 TLDLLSDTGMLASKPVSTPMDYSTHLSASSGTPFTDTAAYRRLVGR 916
Score = 83.6 bits (205), Expect(7) = e-127
Identities = 45/96 (46%), Positives = 58/96 (60%), Gaps = 7/96 (7%)
Frame = +2
Query: 2051 LLYLNLTR-------HDISQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR +SQFV+NP ++H A +L YLKG G+F S S L A
Sbjct: 917 LIYLPNTRPAIAYAVQQLSQFVSNPPTAHRQALFRILCYLKGTPGSGIFLSVNSSVQLRA 976
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKKNI 2317
+SD D A C D RRSI G+ V+LG+ L+SWK+KK I
Sbjct: 977 FSDYDWAGCPDTRRSITGFAVYLGDSLISWKSKKQI 1012
Score = 43.1 bits (100), Expect(7) = e-127
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK VSRSS E EYRAL +T CE+Q +++L + L P LY N
Sbjct: 1009 KKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDN 1057
Score = 40.4 bits (93), Expect(7) = e-127
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 77 NCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
+C+ CH KQ + SFP ++A F+L+H+D+WG
Sbjct: 262 SCNTCHHDKQKKLSFPLSHSYALQPFDLLHMDIWG 296
Score = 40.4 bits (93), Expect(7) = e-127
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 689 ILPQKTKFDSRAHKCIFLVYELGQKGYELFNLVTHRL 799
I +TK D RAH CIFL ++ KGY L NL TH L
Sbjct: 463 ITSHRTKLDPRAHPCIFLGFKPHTKGYLLVNLHTHGL 499
>gb|KYP70921.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1352
Score = 167 bits (423), Expect(7) = e-122
Identities = 113/328 (34%), Positives = 159/328 (48%), Gaps = 11/328 (3%)
Frame = +1
Query: 793 QVTKEVHFVETEFPSYNKSTET-------PLPITTS-FDTDYNXXXXXXXXXXXXXXXXX 948
+V++ V F E FP + + T++ P P T++ DYN
Sbjct: 710 EVSRNVVFYENHFPYFTQDTQSASSTPSLPTPFTSNPMIHDYNFYPPSPSSHPPHSLSSP 769
Query: 949 XXHLDLHIPHRKAPRHITKPFRFNDFVTCNITNL*PTTAVPDGLPR---LSLTALPFSFS 1119
IP R R P D+ T+ P+++ P +S L F
Sbjct: 770 ESPTSSPIPSRPT-RSRHPPSYLRDY-HMTFTSTGPSSSPGIRYPLDSVISYNRLSHPFR 827
Query: 1120 TFVSSLDTVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKW 1299
F+ S +S L EP S A+ASK W++ M E+ A AIGCKW
Sbjct: 828 HFIMS---ISLLTEPKSYAEASKSDCWIKAMTDEITALEANNTWTVTSLPPHKTAIGCKW 884
Query: 1300 VYKIKMHPNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLH 1479
+YK+K H +G++ERHK+RLVAKGY + G+D++D+F+PVAKL T+ +L+ +A++ L
Sbjct: 885 IYKVKHHADGSVERHKARLVAKGYTQLEGLDFLDTFAPVAKLTTVHLLLSLAAIHNWFLK 944
Query: 1480 QLDINNAFVHSFLNEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTA 1659
QLDINNAF+H LNE +YM G G+VC L SLYGLK A RQW + +
Sbjct: 945 QLDINNAFLHGDLNEEVYMHLPPGLTTTTPGQVCKLNRSLYGLKQASRQWYARLSTFIMQ 1004
Query: 1660 YGFIQSPHDTFLFIKHIGDTYFCLC*YM 1743
GF S D LF+K L Y+
Sbjct: 1005 QGFHHSSADHSLFLKFTNSACTALLVYV 1032
Score = 126 bits (316), Expect(7) = e-122
Identities = 64/151 (42%), Positives = 88/151 (58%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDD++R W +L++ K + FI +NQF +K RTDNG EF F
Sbjct: 522 IVDDHTRYTWVFLMASKADTCNCVTNFISHIENQFATRVKVIRTDNGAEF---SMNNYFD 578
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
+ GIIHQ + + TP QN I+ERKH+HLL+ R +LF SNLP FW F+L+ A Y+IN +P
Sbjct: 579 SKGIIHQTTCIETPEQNRIVERKHQHLLNVTRALLFQSNLPPTFWNFALMHATYIINCIP 638
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
+ L +P+E KP LR F CL +
Sbjct: 639 TPFLQHTSPFENLNGKPCDITTLRVFGCLCY 669
Score = 82.4 bits (202), Expect(7) = e-122
Identities = 46/106 (43%), Positives = 62/106 (58%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+L+YVDD+ ++ G DL I + L F IKDLG YF G+E+AR S +L QRK+
Sbjct: 1028 LLVYVDDI-VLAGNDLTEIHQITALLHKTFKIKDLGDLTYFLGLEVARNSIEIHLCQRKY 1086
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
LDILS G+L C ++ L + G PLT+P YR L+GR
Sbjct: 1087 TLDILSDTGMLACCPSSTLMDYKAALSSDTGTPLTDPSAYRQLIGR 1132
Score = 80.5 bits (197), Expect(7) = e-122
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Frame = +2
Query: 2030 QMVGGEILLYLNLTRHDI-------SQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSAT 2188
Q++G L+YL T DI SQF + P + H A +LRYLK +G+F SA
Sbjct: 1128 QLIGR--LIYLTNTHPDITHAVQHLSQFASKPTTYHQHAAFRILRYLKQAPGRGIFLSAN 1185
Query: 2189 GSFCLTAYSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
S L ++SD D A C D RRSI G+ V+LG L+SWK+KK
Sbjct: 1186 SSLQLKSFSDSDWAGCMDTRRSITGFAVYLGHSLISWKSKK 1226
Score = 45.1 bits (105), Expect(7) = e-122
Identities = 25/49 (51%), Positives = 28/49 (57%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK VSRSS E EYRAL ST CE+Q +T+L L P LY N
Sbjct: 1225 KKQATVSRSSSEAEYRALASTSCEIQWLTYLLEDFRLQFIRPALLYCDN 1273
Score = 38.9 bits (89), Expect(7) = e-122
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 80 CDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
C+ CH +KQ + SFP + A F L+H+D+WG
Sbjct: 473 CNTCHHAKQKKLSFPLSHSHALQSFALLHIDIWG 506
Score = 33.5 bits (75), Expect(7) = e-122
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 701 KTKFDSRAHKCIFLVYELGQKGYELFNLVTHRL 799
+TK D RA C+FL ++ KGY FNL T +
Sbjct: 677 RTKLDPRASPCVFLGFQPHTKGYLTFNLNTRSI 709
>ref|XP_013664987.1| PREDICTED: uncharacterized protein LOC106369368 [Brassica napus]
Length = 1808
Score = 163 bits (413), Expect(5) = e-102
Identities = 104/318 (32%), Positives = 157/318 (49%), Gaps = 6/318 (1%)
Frame = +1
Query: 808 VHFVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKA 987
+HFVE+ S N + P+ S +H+
Sbjct: 1169 LHFVESTPISSNGESSQPVSDDLSRSVSSETRTHTHDTVSNTDSTHTTTDTGIHLSDVSR 1228
Query: 988 PRHITKPFRFNDFVTCNITNL*PTTAVPDGLPRLSLTALPFSFS-TFVSSLDTVSTLHEP 1164
P+ +T+ + C++ + P+++ LS F+ F SS+ S EP
Sbjct: 1229 PKRMTRAPTYLSQYHCSLVSTIPSSSCRKTPYPLSSVISYVRFNPVFQSSVHAYSLETEP 1288
Query: 1165 ISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERH 1344
+ QA W + N E++A AIGCKWV+ IK + +GT+ERH
Sbjct: 1289 KTFKQAMSSDKWKKAANVELDAMEQNRTWDVVSLPDGKTAIGCKWVFTIKYNADGTVERH 1348
Query: 1345 KSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNE 1524
K RLVA+G+ GIDY+D+FSPVAKL ++++L+ +A++KG L+Q+D++NAF+H L+E
Sbjct: 1349 KGRLVAQGFTQQEGIDYIDTFSPVAKLTSVKLLLALAAIKGWSLNQMDVSNAFLHGELDE 1408
Query: 1525 HIYM*PLLGY*K-----YKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDT 1689
IYM GY VC L+ S+YGLK A RQW +F + L +IQSP D
Sbjct: 1409 EIYMRLPQGYTPPTGVILPPNPVCRLRKSIYGLKQASRQWYKRFSSVLLGDNYIQSPADN 1468
Query: 1690 FLFIKHIGDTYFCLC*YM 1743
LFIK GD++ + Y+
Sbjct: 1469 TLFIKRSGDSFVAVLVYV 1486
Score = 92.8 bits (229), Expect(5) = e-102
Identities = 50/113 (44%), Positives = 71/113 (62%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
VL+YVDD++I + + A+ +L+ L F IKDLG A +F G+E+AR+STG + QRK+
Sbjct: 1482 VLVYVDDIMIASN-NTAAVADLQALLRSEFKIKDLGQARFFLGLEIARSSTGISVCQRKY 1540
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGRYCCILIS 2069
L++L GLL CK + P L L + GVPL NP YR L+GR + I+
Sbjct: 1541 TLNLLEDSGLLGCKPSSIPMDPTLHLTKDMGVPLENPTAYRELIGRLLYLTIT 1593
Score = 90.1 bits (222), Expect(5) = e-102
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTR-------HDISQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
LLYL +TR H +SQF+++P H+ A +LRYLK +G +SA CL A
Sbjct: 1587 LLYLTITRPDITFAVHQLSQFLSSPTDVHFQAAHKILRYLKNNPGQGFMFSANAELCLNA 1646
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
++D D ATCK+ RRSI G+ V+LG L+SWK+KK
Sbjct: 1647 FADADWATCKETRRSITGFCVYLGSSLLSWKSKK 1680
Score = 83.2 bits (204), Expect(5) = e-102
Identities = 38/76 (50%), Positives = 54/76 (71%)
Frame = +3
Query: 450 QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILPSSLLH*KTPYELNYN 629
QN ++ERKH+HLL+ AR +LF SN+P+ +W+ + TA +LIN +PS LL K+P+E
Sbjct: 1015 QNSVVERKHQHLLNVARALLFQSNVPMVYWSDCIRTAVFLINKMPSPLLDNKSPFEKLLG 1074
Query: 630 KPPGYYVLRPFSCLTF 677
K P Y++LR F CL F
Sbjct: 1075 KAPDYHLLRSFGCLCF 1090
Score = 36.2 bits (82), Expect(5) = e-102
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 701 KTKFDSRAHKCIFLVYELGQKGYELFNLVTHRL 799
+TKF RA C+FL Y G KGY++ +L +H +
Sbjct: 1098 RTKFSPRAIPCVFLGYPSGVKGYKVLDLESHSI 1130
Score = 158 bits (400), Expect(3) = 8e-57
Identities = 87/212 (41%), Positives = 124/212 (58%), Gaps = 5/212 (2%)
Frame = +1
Query: 1123 FVSSLDTVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWV 1302
F SS+ S EP + QA W + N E++A AIGC+WV
Sbjct: 669 FQSSVHAYSLETEPKTFKQAMSSDKWKKAANVELDAMEQNRTWDVVSLPDGKTAIGCRWV 728
Query: 1303 YKIKMHPNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQ 1482
+ IK + +GT+ERHK RLVA+G+ GIDY+D+FSPVAKL ++++L+ +A++KG L+Q
Sbjct: 729 FTIKYNADGTVERHKGRLVAQGFTQQEGIDYIDTFSPVAKLTSVKLLLALAAIKGWSLNQ 788
Query: 1483 LDINNAFVHSFLNEHIYM*PLLGY*K-----YKVGEVCLLKISLYGLKHALRQWNTKFCN 1647
+D++NAF+H L+E IYM GY VC L+ S+YGLK A RQW +F +
Sbjct: 789 MDVSNAFLHGELDEEIYMRLPQGYTPPTGVILPPNPVCRLRKSIYGLKQASRQWYKRFSS 848
Query: 1648 KLTAYGFIQSPHDTFLFIKHIGDTYFCLC*YM 1743
L +IQSP D LFIK GD++ + Y+
Sbjct: 849 VLLGDNYIQSPADNTLFIKRSGDSFVAVLVYV 880
Score = 77.8 bits (190), Expect(3) = 8e-57
Identities = 45/113 (39%), Positives = 65/113 (57%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
VL+YVDD++I + + A+ +L+ L F IKDLG A +F G+E+AR+STG + QRK+
Sbjct: 876 VLVYVDDIMIASN-NTAAVADLQALLRSEFKIKDLGQARFFLGLEIARSSTGISVCQRKY 934
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGRYCCILIS 2069
L++L GLL CK +PL NP YR L+GR + I+
Sbjct: 935 TLNLLEDSGLLGCK--------------PSSIPLENPTAYRELIGRLLYLTIT 973
Score = 36.6 bits (83), Expect(3) = 8e-57
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Frame = +2
Query: 2051 LLYLNLTR-------HDISQFVNNPFSSHWDATIHLLRYLKGCASKG 2170
LLYL +TR H +SQF+++P H+ A +LRYLK +G
Sbjct: 967 LLYLTITRPDITFAVHQLSQFLSSPTDVHFQAAHKILRYLKNNPGQG 1013
Score = 105 bits (263), Expect(3) = 1e-29
Identities = 53/125 (42%), Positives = 76/125 (60%)
Frame = +3
Query: 303 FILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFHNHGIIHQNSFVYTP*QNGIMERKHRH 482
F+ Q+++ +K R+DN E T L G+ H S YTP QN ++ERKH+H
Sbjct: 333 FLKYISTQYKSKVKAIRSDNAPELAFTD---LIKELGMFHYFSCAYTPQQNSVVERKHQH 389
Query: 483 LLDTARVILFLSNLPIDFWTFSLITAKYLINILPSSLLH*KTPYELNYNKPPGYYVLRPF 662
LL+ AR +LF SN+P+ +W+ + TA +LIN +PS LL K+P+E K P Y++LR F
Sbjct: 390 LLNVARALLFQSNVPMVYWSDCIRTAVFLINKMPSPLLDNKSPFEKLLGKAPDYHLLRSF 449
Query: 663 SCLTF 677
CL F
Sbjct: 450 GCLCF 454
Score = 38.9 bits (89), Expect(3) = 1e-29
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 53 ESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWGSNHSGIF 202
++++ L C +C ++KQ R ++ S AS F+LVH+D+W S +F
Sbjct: 284 KNIESELSPCSVCPLAKQRRLAYVSHNHLASAPFDLVHLDIWVSTIFPLF 333
Score = 36.2 bits (82), Expect(3) = 1e-29
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 701 KTKFDSRAHKCIFLVYELGQKGYELFNLVTHRL 799
+TKF RA C+FL Y G KGY++ +L +H +
Sbjct: 462 RTKFSPRAIPCVFLGYPSGVKGYKVLDLESHSI 494
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 144 bits (364), Expect(4) = 9e-96
Identities = 106/347 (30%), Positives = 155/347 (44%), Gaps = 15/347 (4%)
Frame = +1
Query: 721 STQMYFPGI*IGSKGV*TIQFGNSQ--VTKEVHFVETEFPSYNKSTETPLP---ITTSFD 885
S + F G G KG + V+++V F E FP N +P + T+
Sbjct: 510 SRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVNIIPENIVPTASS 569
Query: 886 TDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPRHITKPFRFNDFVTCNITNL*PTTA 1065
+ P K R DFVT + P+ A
Sbjct: 570 APLSPGPEVVPTVGLDSLGLDNSSNGQSAPMGKGMRDKFPSVLLRDFVTHTVVAESPSPA 629
Query: 1066 VPDGLPRLSLTALPFSFSTFVSS----------LDTVSTLHEPISNAQASKDPGWVEVMN 1215
P P+ + P+ + +++ L T+ + ++P S +A KD GW + M+
Sbjct: 630 TPX--PQHP-SGTPYPIAHYINCDNFSVHYRKFLATIISSNDPKSFKEAMKDVGWQKSMH 686
Query: 1216 KEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKSRLVAKGYHHI*GIDY 1395
+E+ A A+G +WVY+ K NG +ER KSRLV G H GIDY
Sbjct: 687 EEIRALEENGTWTLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDY 746
Query: 1396 VDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHIYM*PLLGY*KYKVGE 1575
++FSPVAK+ T+R + +A+ K LHQ+D++NAF+H L E +YM G+ +
Sbjct: 747 HETFSPVAKMTTVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNL 806
Query: 1576 VCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFLFIKHIGD 1716
VC L+ SLYGLK A R W +K L YGF+QS D LF G+
Sbjct: 807 VCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGN 853
Score = 139 bits (350), Expect(4) = 9e-96
Identities = 70/152 (46%), Positives = 95/152 (62%), Gaps = 1/152 (0%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTT-LF 401
+VDD+SR +W YL+ KT+V + FI M QF +K ++DNGTEF +C F
Sbjct: 347 IVDDFSRAVWIYLLVDKTEVFRMFMSFIAMVDRQFSQTVKVVQSDNGTEF---KCLLDYF 403
Query: 402 HNHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINIL 581
GI+ Q S V TP QNG +ERKH+H+L+ R + F +NLPI FW S++ A +LIN
Sbjct: 404 SATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRT 463
Query: 582 PSSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
PS LLH KTP+E+ + PP Y + F CL+F
Sbjct: 464 PSPLLHNKTPFEILFGTPPSYAAIHTFGCLSF 495
Score = 100 bits (248), Expect(4) = 9e-96
Identities = 57/117 (48%), Positives = 73/117 (62%)
Frame = +3
Query: 1719 VLLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLN 1898
V + VL+YVDD LI++G D A+ K YL D F +KDLGV YF GIE+AR+S G +L
Sbjct: 854 VQINVLVYVDD-LIISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLC 912
Query: 1899 QRKHVLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGRYCCILIS 2069
QRK+ LDI+S GLL K P Q RL G L+NP+ YR LVGR + ++
Sbjct: 913 QRKYTLDIVSEAGLLGAKPCGFPIEQNHRLXLANGELLSNPESYRRLVGRLIYLAVT 969
Score = 40.4 bits (93), Expect(4) = 9e-96
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 74 KNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWGS 184
K C+IC +K R FP A+ +FE +H D+WGS
Sbjct: 296 KACEICFRAKHXRDKFPLSDNKATRIFEKIHCDLWGS 332
Score = 78.2 bits (191), Expect(2) = 9e-16
Identities = 43/108 (39%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Frame = +2
Query: 2009 SNESRSVQMVGGEILLYLNLTR-------HDISQFVNNPFSSHWDATIHLLRYLKGCASK 2167
SN ++VG L+YL +TR H +SQF+ P HW+A + ++RYLKG +
Sbjct: 951 SNPESYRRLVGR--LIYLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQ 1008
Query: 2168 GLFYSATGSFCLTAYSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
G+ A L + D D A C RRS+ G+ VFLG+ +SWKTKK
Sbjct: 1009 GILLRADSDLSLQGWCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKK 1056
Score = 36.2 bits (82), Expect(2) = 9e-16
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +1
Query: 2305 KKKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIP 2439
KK+HT VSRSS E EYRA+ + CE++ + L LLSL V P
Sbjct: 1055 KKQHT-VSRSSAEAEYRAMAAVTCELKWLKGL----LLSLGVHHP 1094
>ref|XP_010526678.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X1 [Tarenaya hassleriana]
Length = 1275
Score = 153 bits (386), Expect(5) = 3e-85
Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Frame = +1
Query: 814 FVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPR 993
F E+ P S+ P++ F TD H+ K P
Sbjct: 882 FYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPA 941
Query: 994 HITKPFRFNDFVTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTFVSSLDTVSTLHEPIS 1170
+++ ++ ++ + + P P L L+ L S+ TF + ++T EP S
Sbjct: 942 YLSD---YHCYLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN---ITTAPEPQS 995
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
QA+K W + M E+EA A+GCKWV+K K + +G++ERHK+
Sbjct: 996 YTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNADGSIERHKA 1055
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLVAKGY + G+D+ ++FSPVAK+ T+R+L+ +A+ ++Q+D++NAF++ L+E I
Sbjct: 1056 RLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEI 1115
Query: 1531 YM*PLLGY-----*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFL 1695
YM GY K VC L+ SLYGLK A RQWN K L A GF+Q D L
Sbjct: 1116 YMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSL 1175
Query: 1696 FIKHIGDTYFCLC*YM 1743
F+K G + Y+
Sbjct: 1176 FLKRNGSQLVAVLVYV 1191
Score = 133 bits (335), Expect(5) = 3e-85
Identities = 70/151 (46%), Positives = 92/151 (60%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W YL+ K+ V +F+ +NQF +IK R+DN E +LF
Sbjct: 659 IVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFA 715
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
GI+HQ S YTP QN I+ERKH+H+L+ AR +LF SN+P+ FW ++T+ YLIN P
Sbjct: 716 KKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTP 775
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
S LL KTP+EL P Y LR F CL +
Sbjct: 776 SPLLQNKTPFELLTGCSPSYSHLRVFGCLCY 806
Score = 55.1 bits (131), Expect(5) = 3e-85
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 1722 LLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQ 1901
L+ VL+YVDD+LI TG D I++LK L F IKDLG YF G+E+AR+ G Q
Sbjct: 1184 LVAVLVYVDDLLI-TGNDAAMISDLKDTLHSSFEIKDLGPLHYFLGLEVARSKQGPDTTQ 1242
Query: 1902 RKHVLDILSYMGLL-DCKSVASPFPQGLRLIGE 1997
R DI + G+ C+ V LR+ G+
Sbjct: 1243 R---ADICNGEGICKTCRRVLLSEMAHLRVYGQ 1272
Score = 40.4 bits (93), Expect(5) = 3e-85
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 8 NLDKNIYLTL*SFFTESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
++DK+ L + T S+ +C +C ++KQ R SFP + FEL+HVDVWG
Sbjct: 591 SIDKSSELKFSTSETSSI-----SCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 643
Score = 27.7 bits (60), Expect(5) = 3e-85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF+ RA +FL Y G KGY++ +L
Sbjct: 816 KFNPRAMSAVFLGYPHGVKGYKVLDL 841
>ref|XP_010526680.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X2 [Tarenaya hassleriana]
Length = 1244
Score = 153 bits (386), Expect(5) = 3e-85
Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Frame = +1
Query: 814 FVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPR 993
F E+ P S+ P++ F TD H+ K P
Sbjct: 851 FYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPA 910
Query: 994 HITKPFRFNDFVTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTFVSSLDTVSTLHEPIS 1170
+++ ++ ++ + + P P L L+ L S+ TF + ++T EP S
Sbjct: 911 YLSD---YHCYLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN---ITTAPEPQS 964
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
QA+K W + M E+EA A+GCKWV+K K + +G++ERHK+
Sbjct: 965 YTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNADGSIERHKA 1024
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLVAKGY + G+D+ ++FSPVAK+ T+R+L+ +A+ ++Q+D++NAF++ L+E I
Sbjct: 1025 RLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEI 1084
Query: 1531 YM*PLLGY-----*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFL 1695
YM GY K VC L+ SLYGLK A RQWN K L A GF+Q D L
Sbjct: 1085 YMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSL 1144
Query: 1696 FIKHIGDTYFCLC*YM 1743
F+K G + Y+
Sbjct: 1145 FLKRNGSQLVAVLVYV 1160
Score = 133 bits (335), Expect(5) = 3e-85
Identities = 70/151 (46%), Positives = 92/151 (60%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W YL+ K+ V +F+ +NQF +IK R+DN E +LF
Sbjct: 628 IVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFA 684
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
GI+HQ S YTP QN I+ERKH+H+L+ AR +LF SN+P+ FW ++T+ YLIN P
Sbjct: 685 KKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTP 744
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
S LL KTP+EL P Y LR F CL +
Sbjct: 745 SPLLQNKTPFELLTGCSPSYSHLRVFGCLCY 775
Score = 55.1 bits (131), Expect(5) = 3e-85
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 1722 LLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQ 1901
L+ VL+YVDD+LI TG D I++LK L F IKDLG YF G+E+AR+ G Q
Sbjct: 1153 LVAVLVYVDDLLI-TGNDAAMISDLKDTLHSSFEIKDLGPLHYFLGLEVARSKQGPDTTQ 1211
Query: 1902 RKHVLDILSYMGLL-DCKSVASPFPQGLRLIGE 1997
R DI + G+ C+ V LR+ G+
Sbjct: 1212 R---ADICNGEGICKTCRRVLLSEMAHLRVYGQ 1241
Score = 40.4 bits (93), Expect(5) = 3e-85
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 8 NLDKNIYLTL*SFFTESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
++DK+ L + T S+ +C +C ++KQ R SFP + FEL+HVDVWG
Sbjct: 560 SIDKSSELKFSTSETSSI-----SCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 612
Score = 27.7 bits (60), Expect(5) = 3e-85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF+ RA +FL Y G KGY++ +L
Sbjct: 785 KFNPRAMSAVFLGYPHGVKGYKVLDL 810
>ref|XP_010526682.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X4 [Tarenaya hassleriana]
Length = 940
Score = 153 bits (386), Expect(5) = 3e-85
Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Frame = +1
Query: 814 FVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPR 993
F E+ P S+ P++ F TD H+ K P
Sbjct: 547 FYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPA 606
Query: 994 HITKPFRFNDFVTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTFVSSLDTVSTLHEPIS 1170
+++ ++ ++ + + P P L L+ L S+ TF + ++T EP S
Sbjct: 607 YLSD---YHCYLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN---ITTAPEPQS 660
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
QA+K W + M E+EA A+GCKWV+K K + +G++ERHK+
Sbjct: 661 YTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNADGSIERHKA 720
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLVAKGY + G+D+ ++FSPVAK+ T+R+L+ +A+ ++Q+D++NAF++ L+E I
Sbjct: 721 RLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEI 780
Query: 1531 YM*PLLGY-----*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFL 1695
YM GY K VC L+ SLYGLK A RQWN K L A GF+Q D L
Sbjct: 781 YMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSL 840
Query: 1696 FIKHIGDTYFCLC*YM 1743
F+K G + Y+
Sbjct: 841 FLKRNGSQLVAVLVYV 856
Score = 133 bits (335), Expect(5) = 3e-85
Identities = 70/151 (46%), Positives = 92/151 (60%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W YL+ K+ V +F+ +NQF +IK R+DN E +LF
Sbjct: 324 IVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFA 380
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
GI+HQ S YTP QN I+ERKH+H+L+ AR +LF SN+P+ FW ++T+ YLIN P
Sbjct: 381 KKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTP 440
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
S LL KTP+EL P Y LR F CL +
Sbjct: 441 SPLLQNKTPFELLTGCSPSYSHLRVFGCLCY 471
Score = 55.1 bits (131), Expect(5) = 3e-85
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 1722 LLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQ 1901
L+ VL+YVDD+LI TG D I++LK L F IKDLG YF G+E+AR+ G Q
Sbjct: 849 LVAVLVYVDDLLI-TGNDAAMISDLKDTLHSSFEIKDLGPLHYFLGLEVARSKQGPDTTQ 907
Query: 1902 RKHVLDILSYMGLL-DCKSVASPFPQGLRLIGE 1997
R DI + G+ C+ V LR+ G+
Sbjct: 908 R---ADICNGEGICKTCRRVLLSEMAHLRVYGQ 937
Score = 40.4 bits (93), Expect(5) = 3e-85
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 8 NLDKNIYLTL*SFFTESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
++DK+ L + T S+ +C +C ++KQ R SFP + FEL+HVDVWG
Sbjct: 256 SIDKSSELKFSTSETSSI-----SCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 308
Score = 27.7 bits (60), Expect(5) = 3e-85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF+ RA +FL Y G KGY++ +L
Sbjct: 481 KFNPRAMSAVFLGYPHGVKGYKVLDL 506
>ref|XP_010526683.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X5 [Tarenaya hassleriana]
Length = 886
Score = 153 bits (386), Expect(5) = 3e-85
Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Frame = +1
Query: 814 FVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPR 993
F E+ P S+ P++ F TD H+ K P
Sbjct: 493 FYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPA 552
Query: 994 HITKPFRFNDFVTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTFVSSLDTVSTLHEPIS 1170
+++ ++ ++ + + P P L L+ L S+ TF + ++T EP S
Sbjct: 553 YLSD---YHCYLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN---ITTAPEPQS 606
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
QA+K W + M E+EA A+GCKWV+K K + +G++ERHK+
Sbjct: 607 YTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNADGSIERHKA 666
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLVAKGY + G+D+ ++FSPVAK+ T+R+L+ +A+ ++Q+D++NAF++ L+E I
Sbjct: 667 RLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEI 726
Query: 1531 YM*PLLGY-----*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFL 1695
YM GY K VC L+ SLYGLK A RQWN K L A GF+Q D L
Sbjct: 727 YMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSL 786
Query: 1696 FIKHIGDTYFCLC*YM 1743
F+K G + Y+
Sbjct: 787 FLKRNGSQLVAVLVYV 802
Score = 133 bits (335), Expect(5) = 3e-85
Identities = 70/151 (46%), Positives = 92/151 (60%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W YL+ K+ V +F+ +NQF +IK R+DN E +LF
Sbjct: 270 IVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFA 326
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
GI+HQ S YTP QN I+ERKH+H+L+ AR +LF SN+P+ FW ++T+ YLIN P
Sbjct: 327 KKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTP 386
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
S LL KTP+EL P Y LR F CL +
Sbjct: 387 SPLLQNKTPFELLTGCSPSYSHLRVFGCLCY 417
Score = 55.1 bits (131), Expect(5) = 3e-85
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 1722 LLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQ 1901
L+ VL+YVDD+LI TG D I++LK L F IKDLG YF G+E+AR+ G Q
Sbjct: 795 LVAVLVYVDDLLI-TGNDAAMISDLKDTLHSSFEIKDLGPLHYFLGLEVARSKQGPDTTQ 853
Query: 1902 RKHVLDILSYMGLL-DCKSVASPFPQGLRLIGE 1997
R DI + G+ C+ V LR+ G+
Sbjct: 854 R---ADICNGEGICKTCRRVLLSEMAHLRVYGQ 883
Score = 40.4 bits (93), Expect(5) = 3e-85
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 8 NLDKNIYLTL*SFFTESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
++DK+ L + T S+ +C +C ++KQ R SFP + FEL+HVDVWG
Sbjct: 202 SIDKSSELKFSTSETSSI-----SCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 254
Score = 27.7 bits (60), Expect(5) = 3e-85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF+ RA +FL Y G KGY++ +L
Sbjct: 427 KFNPRAMSAVFLGYPHGVKGYKVLDL 452
>ref|XP_010526684.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X6 [Tarenaya hassleriana]
Length = 789
Score = 153 bits (386), Expect(5) = 3e-85
Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Frame = +1
Query: 814 FVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPR 993
F E+ P S+ P++ F TD H+ K P
Sbjct: 396 FYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPA 455
Query: 994 HITKPFRFNDFVTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTFVSSLDTVSTLHEPIS 1170
+++ ++ ++ + + P P L L+ L S+ TF + ++T EP S
Sbjct: 456 YLSD---YHCYLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN---ITTAPEPQS 509
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
QA+K W + M E+EA A+GCKWV+K K + +G++ERHK+
Sbjct: 510 YTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNADGSIERHKA 569
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLVAKGY + G+D+ ++FSPVAK+ T+R+L+ +A+ ++Q+D++NAF++ L+E I
Sbjct: 570 RLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEI 629
Query: 1531 YM*PLLGY-----*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFL 1695
YM GY K VC L+ SLYGLK A RQWN K L A GF+Q D L
Sbjct: 630 YMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSL 689
Query: 1696 FIKHIGDTYFCLC*YM 1743
F+K G + Y+
Sbjct: 690 FLKRNGSQLVAVLVYV 705
Score = 133 bits (335), Expect(5) = 3e-85
Identities = 70/151 (46%), Positives = 92/151 (60%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W YL+ K+ V +F+ +NQF +IK R+DN E +LF
Sbjct: 173 IVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFA 229
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
GI+HQ S YTP QN I+ERKH+H+L+ AR +LF SN+P+ FW ++T+ YLIN P
Sbjct: 230 KKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTP 289
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
S LL KTP+EL P Y LR F CL +
Sbjct: 290 SPLLQNKTPFELLTGCSPSYSHLRVFGCLCY 320
Score = 55.1 bits (131), Expect(5) = 3e-85
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 1722 LLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQ 1901
L+ VL+YVDD+LI TG D I++LK L F IKDLG YF G+E+AR+ G Q
Sbjct: 698 LVAVLVYVDDLLI-TGNDAAMISDLKDTLHSSFEIKDLGPLHYFLGLEVARSKQGPDTTQ 756
Query: 1902 RKHVLDILSYMGLL-DCKSVASPFPQGLRLIGE 1997
R DI + G+ C+ V LR+ G+
Sbjct: 757 R---ADICNGEGICKTCRRVLLSEMAHLRVYGQ 786
Score = 40.4 bits (93), Expect(5) = 3e-85
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 8 NLDKNIYLTL*SFFTESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
++DK+ L + T S+ +C +C ++KQ R SFP + FEL+HVDVWG
Sbjct: 105 SIDKSSELKFSTSETSSI-----SCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 157
Score = 27.7 bits (60), Expect(5) = 3e-85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF+ RA +FL Y G KGY++ +L
Sbjct: 330 KFNPRAMSAVFLGYPHGVKGYKVLDL 355
>ref|XP_010526681.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 isoform X3 [Tarenaya hassleriana]
Length = 1238
Score = 153 bits (386), Expect(5) = 8e-84
Identities = 102/316 (32%), Positives = 155/316 (49%), Gaps = 6/316 (1%)
Frame = +1
Query: 814 FVETEFPSYNKSTETPLPITTSFDTDYNXXXXXXXXXXXXXXXXXXXHLDLHIPHRKAPR 993
F E+ P S+ P++ F TD H+ K P
Sbjct: 882 FYESISPQNLSSSSALSPVSQEFPTDPISSLGSSETDSSGFVTSSSAHVTRPQRQSKTPA 941
Query: 994 HITKPFRFNDFVTCNITNL*PTTAVPDGLPR-LSLTALPFSFSTFVSSLDTVSTLHEPIS 1170
+++ ++ ++ + + P P L L+ L S+ TF + ++T EP S
Sbjct: 942 YLSD---YHCYLISHNSTPHPNPVTPYPLSACLTYDLLSPSYRTFALN---ITTAPEPQS 995
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
QA+K W + M E+EA A+GCKWV+K K + +G++ERHK+
Sbjct: 996 YTQAAKFESWRQAMKLELEALIRTNTWSICTLPDGKNAVGCKWVFKTKYNADGSIERHKA 1055
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLVAKGY + G+D+ ++FSPVAK+ T+R+L+ +A+ ++Q+D++NAF++ L+E I
Sbjct: 1056 RLVAKGYTQLEGVDFSETFSPVAKMTTVRVLLALAAKYNWLINQMDVSNAFLNGDLDEEI 1115
Query: 1531 YM*PLLGY-----*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFL 1695
YM GY K VC L+ SLYGLK A RQWN K L A GF+Q D L
Sbjct: 1116 YMKLPPGYSDLQGEKVSSSSVCKLQRSLYGLKQASRQWNQKLSQVLLAAGFLQVQSDNSL 1175
Query: 1696 FIKHIGDTYFCLC*YM 1743
F+K G + Y+
Sbjct: 1176 FLKRNGSQLVAVLVYV 1191
Score = 133 bits (335), Expect(5) = 8e-84
Identities = 70/151 (46%), Positives = 92/151 (60%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W YL+ K+ V +F+ +NQF +IK R+DN E +LF
Sbjct: 659 IVDDYSRCTWVYLLKSKSDVLQKFPEFVSFVENQFNASIKCVRSDNAPEL---GFKSLFA 715
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
GI+HQ S YTP QN I+ERKH+H+L+ AR +LF SN+P+ FW ++T+ YLIN P
Sbjct: 716 KKGILHQFSCPYTPQQNSIVERKHQHILNVARALLFQSNVPLAFWGDCILTSVYLINRTP 775
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTF 677
S LL KTP+EL P Y LR F CL +
Sbjct: 776 SPLLQNKTPFELLTGCSPSYSHLRVFGCLCY 806
Score = 50.1 bits (118), Expect(5) = 8e-84
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +3
Query: 1722 LLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELART 1877
L+ VL+YVDD+LI TG D I++LK L F IKDLG YF G+E+AR+
Sbjct: 1184 LVAVLVYVDDLLI-TGNDAAMISDLKDTLHSSFEIKDLGPLHYFLGLEVARS 1234
Score = 40.4 bits (93), Expect(5) = 8e-84
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +2
Query: 8 NLDKNIYLTL*SFFTESLQHSLKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
++DK+ L + T S+ +C +C ++KQ R SFP + FEL+HVDVWG
Sbjct: 591 SIDKSSELKFSTSETSSI-----SCPVCPLAKQRRLSFPVSSHVSKFPFELLHVDVWG 643
Score = 27.7 bits (60), Expect(5) = 8e-84
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF+ RA +FL Y G KGY++ +L
Sbjct: 816 KFNPRAMSAVFLGYPHGVKGYKVLDL 841
>gb|KYP42564.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1427
Score = 163 bits (412), Expect(4) = 2e-82
Identities = 105/258 (40%), Positives = 138/258 (53%), Gaps = 3/258 (1%)
Frame = +1
Query: 979 RKAPRHITKPFRFNDFVTCNITNL*PTTAVPDGLPR---LSLTALPFSFSTFVSSLDTVS 1149
RK+ RH P D+ + + P P LS +L S+S +V S ++
Sbjct: 842 RKSTRHKCSPAYLKDYHCNLLIGVPPPEDKHIRYPLNTVLSYDSLSASYSRYVLS---IT 898
Query: 1150 TLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNG 1329
T EP + QA K+ WVE M E++A IG KWVYKIK +G
Sbjct: 899 THVEPHTFNQAVKNKVWVEAMQAELDALEHNKTWTIMPLPPGKTPIGSKWVYKIKYKSDG 958
Query: 1330 TMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVH 1509
++ER+K+RLV KGY I G+DY D+F+PVAKL T+RML+ +AS + LHQLDINNAF+H
Sbjct: 959 SIERYKARLVVKGYTQIQGLDYFDTFAPVAKLSTVRMLLAIASCQHWELHQLDINNAFLH 1018
Query: 1510 SFLNEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDT 1689
L E +YM G K VC L SLYGLK A RQW K + L + + QS HD
Sbjct: 1019 GDLLEDVYMEIPQGLNIDKPNHVCKLNKSLYGLKQASRQWFAKLSSFLLSLHYKQSQHDH 1078
Query: 1690 FLFIKHIGDTYFCLC*YM 1743
LF KH G + + Y+
Sbjct: 1079 SLFTKHHGTHFTVILIYV 1096
Score = 90.1 bits (222), Expect(4) = 2e-82
Identities = 49/94 (52%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDIS-------QFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
LLYL TR DIS QF++ P SH+ A I +LRYLKG +GLFY A L A
Sbjct: 1197 LLYLITTRPDISYSVQQLSQFLSCPQQSHYQAAIRVLRYLKGNPGQGLFYPADSPLQLKA 1256
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
+SD D A+C D RRS+ GY +FLG L+SWK KK
Sbjct: 1257 FSDSDWASCPDTRRSLSGYSIFLGNSLISWKCKK 1290
Score = 81.6 bits (200), Expect(4) = 2e-82
Identities = 47/106 (44%), Positives = 63/106 (59%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+LIYVDD LI+ G D I ++K+ LD F IKDLG YF G+E+AR+ G L+QRK+
Sbjct: 1092 ILIYVDD-LIIAGTDSEEINHIKQSLDVKFKIKDLGPLRYFLGLEIARSHLGISLSQRKY 1150
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
LD+L L K V +P +G RL P +P YR L+G+
Sbjct: 1151 TLDLLDETSFLAGKPVLTPIIKGTRLSHTTDSPYEDPAGYRRLIGK 1196
Score = 45.1 bits (105), Expect(4) = 2e-82
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK + +SRSS E EYRAL +T CE+Q +T+L + P LY N
Sbjct: 1289 KKQSTISRSSSEAEYRALAATACEIQWLTYLLQDFSVPFTTPALLYCDN 1337
Score = 132 bits (333), Expect(2) = 9e-35
Identities = 66/155 (42%), Positives = 96/155 (61%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W Y + K + L++ FI + QF IK R+DNG EF Q L+
Sbjct: 570 IVDDYSRHTWIYFMKSKGETRNLIQNFISYVQTQFTKHIKVLRSDNGVEFAMDQ---LYA 626
Query: 405 NHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILP 584
+GI+HQ S V TP QN ++ERKHRH+L+ R +LF SN+P FW +++ A +LIN LP
Sbjct: 627 TYGIVHQTSCVETPQQNSVVERKHRHILNITRTLLFHSNVPKSFWCYAVGHAIHLINRLP 686
Query: 585 SSLLH*KTPYELNYNKPPGYYVLRPFSCLTFDTNI 689
S +L+ +PY++ Y+KPP L+ F L + + +
Sbjct: 687 SPVLNNSSPYQMLYDKPPTLLDLKVFGSLCYASTL 721
Score = 45.4 bits (106), Expect(2) = 9e-35
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2
Query: 80 CDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
CD CH KQ R FP+ T + + F+LVH+D+WG
Sbjct: 521 CDYCHFGKQARLPFPTSTTKSLSCFDLVHMDIWG 554
>gb|KYP41280.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 395
Score = 155 bits (393), Expect(3) = 7e-81
Identities = 82/187 (43%), Positives = 113/187 (60%)
Frame = +1
Query: 1183 SKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKSRLVA 1362
S+ P W M E+ A IGCKWVYKIK P+G++ER+K+RLVA
Sbjct: 4 SQFPCWNNAMKAEITALEKTNTWILVELPPGKHPIGCKWVYKIKHKPDGSIERYKARLVA 63
Query: 1363 KGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHIYM*P 1542
KG+ + GIDY ++FSPVAK+ T R+L+ +A+ KG L QLD+NNAF+H L+E +YM
Sbjct: 64 KGFTQLEGIDYFETFSPVAKITTFRVLLALAAAKGWHLQQLDVNNAFLHGDLDEEVYMKL 123
Query: 1543 LLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFLFIKHIGDTY 1722
G +VC L+ SLYGLK A RQW++K L + G+ QS D LF+K+ G ++
Sbjct: 124 PPGLTADSPNQVCKLQRSLYGLKQASRQWHSKLTTALLSLGYTQSMADHSLFVKNTGSSF 183
Query: 1723 FCLC*YM 1743
L Y+
Sbjct: 184 TALLVYV 190
Score = 100 bits (250), Expect(3) = 7e-81
Identities = 50/106 (47%), Positives = 74/106 (69%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+L+YVDD+L+ TG DL I ++KKYLDD F+IKDL YF G+E+++++ G LNQRK+
Sbjct: 186 LLVYVDDILL-TGTDLAEINHVKKYLDDQFSIKDLSDLRYFLGLEVSKSAKGIVLNQRKY 244
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
VLDILS GLL K A+P +L + G+ T+P ++R ++G+
Sbjct: 245 VLDILSDAGLLGAKPAATPMDPSTKLQADKGIAYTDPAEFRRIIGK 290
Score = 97.1 bits (240), Expect(3) = 7e-81
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDIS-------QFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR DIS Q+V+NP H+ A I +LRYLKGC KGLF+ ++ S +A
Sbjct: 291 LIYLTTTRPDISYAVQQVSQYVSNPLDLHYKAAIRILRYLKGCPGKGLFFPSSNSLKPSA 350
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
++D D A C D RRS+ GY +FLG+ L+SWK+KK
Sbjct: 351 FADSDWACCLDTRRSVTGYCIFLGDALISWKSKK 384
>gb|KYP61299.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 515
Score = 150 bits (380), Expect(4) = 7e-81
Identities = 76/182 (41%), Positives = 112/182 (61%)
Frame = +1
Query: 1159 EPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTME 1338
EP + +ASK W++ M++E+ A AIGC+WVYK K +G+++
Sbjct: 1 EPKNFVEASKSDSWLKAMHEEISALEANNTWVLTTLPPHKTAIGCRWVYKAKHKADGSID 60
Query: 1339 RHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFL 1518
R+K+RLVAKGY + G+D+ D+FSPVAKL +R+L+ + ++ L QLD+NN+F+H L
Sbjct: 61 RYKARLVAKGYTQMEGLDFFDTFSPVAKLTIVRLLLSLVAIHNWHLKQLDVNNSFLHGDL 120
Query: 1519 NEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFLF 1698
NE +YM G G+VC L+ SLYGLK A RQW + + L +G++ SP D LF
Sbjct: 121 NEEVYMQLPPGITPSFPGQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSDHSLF 180
Query: 1699 IK 1704
+K
Sbjct: 181 LK 182
Score = 90.9 bits (224), Expect(4) = 7e-81
Identities = 51/106 (48%), Positives = 65/106 (61%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+LIYVDD L++ G DL I +L L + F IKDLG YF G+E+AR TG +L QRK+
Sbjct: 191 ILIYVDD-LVLAGNDLTEIHHLTSLLHNTFQIKDLGNLKYFLGLEVARNHTGIHLCQRKY 249
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
LD+LS G+L K V++P L G PLT+ YR LVGR
Sbjct: 250 TLDLLSDTGMLASKPVSTPMDYSTHLFASSGTPLTDTAAYRRLVGR 295
Score = 89.7 bits (221), Expect(4) = 7e-81
Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDI-------SQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR DI SQFV NP ++H A +LRYLKG G+F S S L A
Sbjct: 296 LIYLTNTRPDITYAVQQLSQFVTNPTTAHRQALFRILRYLKGTPGSGIFLSVNSSVQLRA 355
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKKNI 2317
+SD D A C D RRSI G+ V+LG+ L+SWK+KK I
Sbjct: 356 FSDSDWAGCPDTRRSITGFAVYLGDSLISWKSKKQI 391
Score = 43.1 bits (100), Expect(4) = 7e-81
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK VSRSS E EYRAL +T CE+Q +++L + L P LY N
Sbjct: 388 KKQITVSRSSSEAEYRALATTTCELQWLSYLLKDFHIDLIRPSILYCDN 436
>gb|KYP37906.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1097
Score = 155 bits (392), Expect(4) = 9e-81
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 2/203 (0%)
Frame = +1
Query: 1141 TVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMH 1320
++S++ EP S +A +D W + E+ A +GCKWV+K+K +
Sbjct: 635 SISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFN 694
Query: 1321 PNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNA 1500
+GT+ERHK+RLVAKGY G+DY+D+FSPV K+ T+R L+ VA+ K +HQLD+N
Sbjct: 695 SDGTIERHKARLVAKGYTQTEGLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTT 754
Query: 1501 FVHSFLNEHIYM*PLLG--Y*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQ 1674
F+H L+E +YM P G ++ VC L SLYGLK A RQWN K + L GF Q
Sbjct: 755 FLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQ 814
Query: 1675 SPHDTFLFIKHIGDTYFCLC*YM 1743
S D LF K G + + Y+
Sbjct: 815 SMADYSLFTKQFGAKFTAILVYV 837
Score = 95.5 bits (236), Expect(4) = 9e-81
Identities = 52/106 (49%), Positives = 67/106 (63%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+L+YVDD L++ G D I +K LD FTIKDLG YF G+E+AR+STG L QRK+
Sbjct: 833 ILVYVDD-LVLAGNDPTEINYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKY 891
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
LD++ GLL K SP ++L G PLT+P QYR L+GR
Sbjct: 892 ALDLIEDTGLLASKPCKSPMDHSVKLHKTVGTPLTDPTQYRRLLGR 937
Score = 84.3 bits (207), Expect(4) = 9e-81
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDIS-------QFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR DIS QF++ P H+ A + +L+Y+K KGLF+ ++ L
Sbjct: 938 LIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRILKYVKNAPGKGLFFPSSSDLTLKG 997
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
YSD D A+C D RRS+ G+ FLG L+SWK+KK
Sbjct: 998 YSDSDWASCSDTRRSVTGFSFFLGPALISWKSKK 1031
Score = 38.9 bits (89), Expect(4) = 9e-81
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK VS+SS E EYRAL + CE Q I++L L PI L+ N
Sbjct: 1030 KKQATVSKSSAEAEYRALAQSTCEAQWISYLLHDFGLHNFHPIVLFCDN 1078
Score = 141 bits (356), Expect(3) = 6e-38
Identities = 72/168 (42%), Positives = 99/168 (58%)
Frame = +3
Query: 201 FGIPLLSYLVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVN 380
FG +VDD SR W Y + HK++V L FI + +NQF +K R+DNG EF+
Sbjct: 320 FGHRFFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL- 378
Query: 381 TQCTTLFHNHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITA 560
+H GI+HQ S V TP QNGI+ERKH+H++ AR ++ SNLP FW +++ A
Sbjct: 379 --LKNFYHEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHA 436
Query: 561 KYLINILPSSLLH*KTPYELNYNKPPGYYVLRPFSCLTFDTNIYFLRK 704
+LIN PSS L K PYE+ YN P ++ F CL + T ++ RK
Sbjct: 437 VFLINRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRK 484
Score = 40.8 bits (94), Expect(3) = 6e-38
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 80 CDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG-SNHSGIFWH 208
C++C+++KQ + F T A +F+L+HVD+WG + + IF H
Sbjct: 279 CNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGH 322
Score = 26.9 bits (58), Expect(3) = 6e-38
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 701 KTKFDSRAHKCIFLVYELGQKGYELFNL 784
+ KFD R +C+FL ++ KG L++L
Sbjct: 483 RKKFDPRGRRCVFLGFKPQVKGSILYDL 510
>ref|XP_014628734.1| PREDICTED: uncharacterized protein LOC106794221 [Glycine max]
Length = 1150
Score = 168 bits (426), Expect(4) = 2e-80
Identities = 103/259 (39%), Positives = 145/259 (55%), Gaps = 4/259 (1%)
Frame = +1
Query: 979 RKAPRHITKPFRFND----FVTCNITNL*PTTAVPDGLPRLSLTALPFSFSTFVSSLDTV 1146
R+ R T+P ++ D F + ITN P T P +S L S+ +F+ ++
Sbjct: 261 RRTDRIRTRPTKYTDYQTSFTSATITNH-PGTKHPISSV-ISYNKLSSSYHSFILNISAN 318
Query: 1147 STLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPN 1326
S EP S +A K WV+ M+ E+ A IGCKWVYKIK + +
Sbjct: 319 S---EPKSYNEACKHDSWVQAMHDEISALERNNTWVLTDLPQHKNVIGCKWVYKIKHNSD 375
Query: 1327 GTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFV 1506
G++ER+K+RLVAKGY I G+DY+D+FSPVAK+ T+R+L+ +A+L L QLD+NNAF+
Sbjct: 376 GSIERYKARLVAKGYTQIEGLDYLDTFSPVAKITTVRLLLALAALNNWYLRQLDVNNAFL 435
Query: 1507 HSFLNEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHD 1686
H L+E +YM G K G+VC L+ SLYGLK A RQW + L +GF QS D
Sbjct: 436 HGGLHEEVYMVLPPGMKSAKPGQVCKLQRSLYGLKQASRQWYARLSTFLAHHGFKQSVAD 495
Query: 1687 TFLFIKHIGDTYFCLC*YM 1743
LF +++ L Y+
Sbjct: 496 YSLFTLKKANSFTALLVYV 514
Score = 83.2 bits (204), Expect(4) = 2e-80
Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 2/108 (1%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+L+YVDD+ +++G DL I+++ K LDD F IKDLG YF G E+AR ++G + QRK+
Sbjct: 510 LLVYVDDI-VLSGNDLSVISSITKLLDDTFKIKDLGNLKYFLGFEVARGTSGINICQRKY 568
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNP--DQYRWLVGR 2048
LD+L+ +L CK V++PF RL G L++ YR L+GR
Sbjct: 569 ALDLLTDTDMLHCKPVSTPFDYYTRLHQASGSMLSDSQISSYRCLIGR 616
Score = 82.0 bits (201), Expect(4) = 2e-80
Identities = 42/94 (44%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDI-------SQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR DI SQF+ +P ++H+ A +LRY+K GLF+ +T L A
Sbjct: 617 LIYLTNTRPDITFAVQHLSQFIASPTTAHYTALYRILRYIKAAPGLGLFFPSTSELQLKA 676
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
+SD D A C D R+SI G+ V+LG L+SWK+KK
Sbjct: 677 FSDSDWAGCVDTRKSITGFSVYLGSSLISWKSKK 710
Score = 39.7 bits (91), Expect(4) = 2e-80
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFL 2400
KK IVSRSS E YRAL S CE+Q +T+L
Sbjct: 709 KKQAIVSRSSFEAGYRALTSVTCEIQWLTYL 739
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 177 bits (448), Expect(3) = 3e-80
Identities = 106/225 (47%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
Frame = +1
Query: 1087 LSLTALPFSFSTFVSSLDTVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXX 1266
LS L S+ F S VS + EP S A+A++ P W M+ E+EA
Sbjct: 728 LSYDKLSPSYKLFSLS---VSIISEPSSFAKAAEIPEWRAAMDCELEALEENKTWSIVSL 784
Query: 1267 XXXXXAIGCKWVYKIKMHPNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLI 1446
+GCKWVYKIK +GT+ER+K+RLVAKGY GIDYVD+FSPVAKLVT+++L+
Sbjct: 785 XVGKHPVGCKWVYKIKHKADGTIERYKARLVAKGYTQREGIDYVDTFSPVAKLVTVKLLL 844
Query: 1447 IVASLKG*PLHQLDINNAFVHSFLNEHIYM*PLLGY*KYKVGE------VCLLKISLYGL 1608
+A++KG L QLD+NNAF+H LNE +YM GY + GE VCLL SLYGL
Sbjct: 845 AIAAVKGWHLSQLDVNNAFLHGDLNEEVYMKLPPGY--NRKGESLPSNAVCLLHKSLYGL 902
Query: 1609 KHALRQWNTKFCNKLTAYGFIQSPHDTFLFIKHIGDTYFCLC*YM 1743
K A RQW +KF + GF QSP D LFIK++ + L Y+
Sbjct: 903 KQASRQWFSKFSTAIMGLGFSQSPSDHSLFIKNVDGLFIALLVYV 947
Score = 87.4 bits (215), Expect(3) = 3e-80
Identities = 46/110 (41%), Positives = 73/110 (66%)
Frame = +3
Query: 1719 VLLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLN 1898
+ + +L+YVDDV+I + + AI +LK L+ F +KDLG YF G+E+A++STG ++
Sbjct: 939 LFIALLVYVDDVIIASN-NQGAIADLKSELNKLFKLKDLGDVKYFLGLEIAKSSTGICVS 997
Query: 1899 QRKHVLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
QRK+VLD+LS G L CK+ ++P ++L + GV L + YR L+G+
Sbjct: 998 QRKYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPDVSLYRRLLGK 1047
Score = 87.0 bits (214), Expect(3) = 3e-80
Identities = 47/94 (50%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDIS-------QFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
LLYL LTR DIS QF++ P H A +LRYLKG GLF+ + L A
Sbjct: 1048 LLYLTLTRPDISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMA 1107
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
Y+D D A C D+RRS+ G+ VFLG LVSWK+KK
Sbjct: 1108 YTDSDWARCPDSRRSVTGFCVFLGNSLVSWKSKK 1141
Score = 62.8 bits (151), Expect(2) = 5e-10
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +3
Query: 225 LVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFH 404
+VDDYSR W Y++ +K++V + F K QF +K R+DN E + +H
Sbjct: 494 IVDDYSRVTWVYMLKNKSEVQKYIPDFFAFVKKQFGKEVKAIRSDNAPELF---LSNFYH 550
Query: 405 NHGIIHQNSFVYTP*QNGIM 464
+ G+IH S V TP QN ++
Sbjct: 551 SLGVIHYRSCVETPQQNSVL 570
Score = 32.0 bits (71), Expect(2) = 5e-10
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 71 LKNCDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG 181
L C +C ++KQ + S S+ F+L+H+D+WG
Sbjct: 442 LTPCXVCPLAKQRCLPYISLNKRCSSTFDLLHLDIWG 478
>gb|KYP61781.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1413
Score = 158 bits (399), Expect(4) = 3e-80
Identities = 97/236 (41%), Positives = 131/236 (55%), Gaps = 7/236 (2%)
Frame = +1
Query: 1012 RFNDFVTCNITNL*PT-----TAVPDGLPRLSLTALPFS-FST-FVSSLDTVSTLHEPIS 1170
R DFV I L P+ T+ P G P L + ++ FS + L VS EP S
Sbjct: 847 RLRDFVANTICRLDPSPSSLATSRPSGTPYLITHYVNYNNFSAHYRHFLAAVSIGTEPQS 906
Query: 1171 NAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMHPNGTMERHKS 1350
AQA KD W + M E++A AIGCKWVY+IK + +G++ER K+
Sbjct: 907 FAQAMKDEQWQQAMQAEIQALENNGTWTLEPLPPGKKAIGCKWVYRIKYNSDGSIERFKA 966
Query: 1351 RLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNAFVHSFLNEHI 1530
RLV G + + G+DY ++F+PVAK+VT+R L+ VA+ + LHQ+D++NAF+H L E +
Sbjct: 967 RLVILGNNQVEGLDYNETFAPVAKMVTMRTLLAVAAARKWELHQMDVHNAFLHGDLKEEV 1026
Query: 1531 YM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQSPHDTFLF 1698
YM G+ G+VC L+ SLYGLK A R W K L YGF QS D LF
Sbjct: 1027 YMKLPPGFRSQASGKVCRLRKSLYGLKQAPRCWFAKLAGALKRYGFAQSSSDHSLF 1082
Score = 94.4 bits (233), Expect(4) = 3e-80
Identities = 55/110 (50%), Positives = 71/110 (64%)
Frame = +3
Query: 1719 VLLFVLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLN 1898
V L VL+YVDD L+++G D AI K YL+ F +KDLG+ YF GIE+AR STG +L
Sbjct: 1089 VQLHVLVYVDD-LVISGNDNAAIKAFKLYLNACFHMKDLGMLKYFLGIEVARNSTGIFLC 1147
Query: 1899 QRKHVLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
QRK+ LDI+S +GLL K P Q +L G L +P++YR LVGR
Sbjct: 1148 QRKYALDIISEVGLLGAKPAGFPMDQHHQLPLAKGTLLPDPERYRRLVGR 1197
Score = 79.7 bits (195), Expect(4) = 3e-80
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTR-------HDISQFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL++TR H ++QF+ +P HWDA + ++RYLKG +G+ A L A
Sbjct: 1198 LIYLSVTRPELSYCVHTLAQFMQHPRQEHWDAALRVVRYLKGNPGQGILLRANCDLQLYA 1257
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
+ D D A+C RRS+ G+++ LG+ +SWKTKK
Sbjct: 1258 WCDSDWASCPLTRRSLTGWFILLGDSPISWKTKK 1291
Score = 40.0 bits (92), Expect(4) = 3e-80
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 2305 KKKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK+HT VSRSS E EYR++ +T CE++ + L S + + P+ LY N
Sbjct: 1290 KKQHT-VSRSSSEAEYRSMATTTCELKWLKELLSCLGCAHSGPMKLYCDN 1338
Score = 153 bits (386), Expect(2) = 3e-37
Identities = 79/172 (45%), Positives = 106/172 (61%)
Frame = +3
Query: 171 MFGGQITLVYFGIPLLSYLVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTF 350
++G T+ + G +VDDYSR +W YL+ K +V + +F M + QF +K
Sbjct: 531 LWGPYRTISHCGARYFLTIVDDYSRAVWIYLLEEKKEVFTRMCQFFAMVERQFGKQVKVV 590
Query: 351 RTDNGTEFVNTQCTTLFHNHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPI 530
R+DNGTEFV + F NHGI+H+ S TP QNG +ERKHRH+L+ AR + F ++LPI
Sbjct: 591 RSDNGTEFVCMD--SYFQNHGIVHETSCTGTPQQNGRVERKHRHILNVARALRFQAHLPI 648
Query: 531 DFWTFSLITAKYLINILPSSLLH*KTPYELNYNKPPGYYVLRPFSCLTFDTN 686
FW ++TA YLIN PS +LH KTPYE+ YNKPP LR F L + N
Sbjct: 649 KFWGECVLTAGYLINRTPSIVLHGKTPYEMLYNKPPSLNHLRVFGSLCYVHN 700
Score = 33.1 bits (74), Expect(2) = 3e-37
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 707 KFDSRAHKCIFLVYELGQKGYELFNL 784
KF SR+ +C+FL Y G+KG+ +++L
Sbjct: 707 KFASRSRRCVFLGYPYGKKGWRVYDL 732
>emb|CAN60829.1| hypothetical protein VITISV_012059 [Vitis vinifera]
Length = 1128
Score = 165 bits (417), Expect(4) = 4e-80
Identities = 95/265 (35%), Positives = 141/265 (53%), Gaps = 10/265 (3%)
Frame = +1
Query: 979 RKAPRHITKPFRFNDFVTCNITNL*PTTAVPDGLPRLSLTALPFSFSTFVSS-------- 1134
R++ R P ++ N+T + T P S + P+ +F+S
Sbjct: 548 RRSERTKHLPKYLQNYYCGNMTKIDSATQAPSSC---SSSGKPYCIFSFLSDSRLSSKHK 604
Query: 1135 --LDTVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYK 1308
+ +S+ EP + Q P W M E++A AIGCKWVY+
Sbjct: 605 AFIYVISSTFEPKTYKQXVSIPHWQTAMTDEIKALKHNKTWDLAILPPNKTAIGCKWVYR 664
Query: 1309 IKMHPNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLD 1488
+K +G++ER+K+RLVAKGY G+D+ D++SPVAK+ T+R+L+ +A+ K LHQLD
Sbjct: 665 VKFKADGSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAAAKQWYLHQLD 724
Query: 1489 INNAFVHSFLNEHIYM*PLLGY*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGF 1668
+NNAF+H LNE +YM LG+ VC LK SLYGL+ A RQW +K + L +GF
Sbjct: 725 VNNAFLHGDLNEEVYMQLPLGFSTPNDPRVCKLKKSLYGLRQASRQWYSKLSSSLLKFGF 784
Query: 1669 IQSPHDTFLFIKHIGDTYFCLC*YM 1743
Q+ D+ LFIK ++ L Y+
Sbjct: 785 SQAKTDSSLFIKQTSTSFIALLIYV 809
Score = 84.7 bits (208), Expect(4) = 4e-80
Identities = 48/114 (42%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+LIYVDDV+I + DL I +KK+L + FTIKDLG YF GIE+AR++ G L+QRK+
Sbjct: 805 LLIYVDDVIIASN-DLKEIDVVKKFLHESFTIKDLGELKYFVGIEVARSAKGIVLSQRKY 863
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVP-LTNPDQYRWLVGRYCCILIS 2069
LD+L G K + P L+L P L++P Y+ L+G+ + I+
Sbjct: 864 ALDVLKDSGFFGSKPIGFPMESSLKLTANDSSPLLSDPASYKRLIGKLLYLTIT 917
Score = 83.2 bits (204), Expect(4) = 4e-80
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDIS-------QFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
LLYL +TR D++ QF++NP S+H A +LRY+K +GLF A+ L A
Sbjct: 911 LLYLTITRLDLAYXVQALNQFMSNPHSTHLQAAERVLRYIKATLGQGLFLKASSDLHLKA 970
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
YSD D C + RRS+ G+ VF+G+ L+SWK+KK
Sbjct: 971 YSDSDWGGCINTRRSVTGFTVFIGDSLISWKSKK 1004
Score = 38.9 bits (89), Expect(4) = 4e-80
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIP 2439
KK +SRSS + EYRAL +T CE+Q + Y+L+ L V P
Sbjct: 1003 KKQPTISRSSAKAEYRALATTTCELQWLV----YLLVDLNVKHP 1042
Score = 121 bits (303), Expect(2) = 2e-27
Identities = 62/145 (42%), Positives = 85/145 (58%)
Frame = +3
Query: 255 TYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVNTQCTTLFHNHGIIHQNSF 434
T + ++ +L F+ F I+T R+DNG EF T + HGIIHQ S
Sbjct: 292 TNXLEQNSKTRAILTNFLAYVHTHFNTNIQTLRSDNGQEF---NMPTFYQEHGIIHQLSC 348
Query: 435 VYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITAKYLINILPSSLLH*KTPY 614
V TP QNG +ERKH+HLL+ AR ++F S LP+ WT ++TA +LIN PS +L+ +TPY
Sbjct: 349 VETPEQNGRVERKHQHLLNVARSLMFQSKLPLSHWTNYVLTATHLINHTPSYILNNQTPY 408
Query: 615 ELNYNKPPGYYVLRPFSCLTFDTNI 689
+L + KPP Y F CL F + I
Sbjct: 409 QLLFQKPPNYNYFEVFDCLCFASTI 433
Score = 32.3 bits (72), Expect(2) = 2e-27
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 689 ILPQKTKFDSRAHKCIFLVYELGQKGYELFNLVT 790
I + KF RA KCIFL Y KGY++ +L T
Sbjct: 433 ITNNRGKFHPRATKCIFLGYPPNIKGYKVLDLTT 466
>gb|KYP34298.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1002
Score = 152 bits (384), Expect(4) = 1e-79
Identities = 82/203 (40%), Positives = 115/203 (56%), Gaps = 2/203 (0%)
Frame = +1
Query: 1141 TVSTLHEPISNAQASKDPGWVEVMNKEVEAXXXXXXXXXXXXXXXXXAIGCKWVYKIKMH 1320
++S++ EP S +A +D W + E+ A +GCKWV+K+K +
Sbjct: 479 SISSIKEPNSYVEAIQDESWKTAIQTELTALEKNNTWILTPLPPNKQVVGCKWVFKLKFN 538
Query: 1321 PNGTMERHKSRLVAKGYHHI*GIDYVDSFSPVAKLVTIRMLIIVASLKG*PLHQLDINNA 1500
+GT+ERHK+RLVAKGY +DY+D+FSPV K+ T+R L+ VA+ K +HQLD+N
Sbjct: 539 SDGTIERHKARLVAKGYTQTETLDYLDTFSPVVKMTTVRTLLAVATAKNWHIHQLDVNTT 598
Query: 1501 FVHSFLNEHIYM*PLLG--Y*KYKVGEVCLLKISLYGLKHALRQWNTKFCNKLTAYGFIQ 1674
F+H L+E +YM P G ++ VC L SLYGLK A RQWN K + L GF Q
Sbjct: 599 FLHGDLHEEVYMTPPPGLTVSPHQSNCVCKLVKSLYGLKQASRQWNAKLTSVLIDSGFKQ 658
Query: 1675 SPHDTFLFIKHIGDTYFCLC*YM 1743
S D LF K G + + Y+
Sbjct: 659 SMADYSLFTKQFGAKFTAILVYV 681
Score = 95.5 bits (236), Expect(4) = 1e-79
Identities = 52/106 (49%), Positives = 67/106 (63%)
Frame = +3
Query: 1731 VLIYVDDVLIVTGLDLVAITNLKKYLDDFFTIKDLGVAIYFRGIELARTSTGTYLNQRKH 1910
+L+YVDD L++ G D I +K LD FTIKDLG YF G+E+AR+STG L QRK+
Sbjct: 677 ILVYVDD-LVLAGNDPTEINYIKSLLDQKFTIKDLGQLKYFLGMEVARSSTGIALYQRKY 735
Query: 1911 VLDILSYMGLLDCKSVASPFPQGLRLIGECGVPLTNPDQYRWLVGR 2048
LD++ GLL K SP ++L G PLT+P QYR L+GR
Sbjct: 736 ALDLIEDTGLLASKPCKSPMDHSVKLHKTVGTPLTDPTQYRRLLGR 781
Score = 84.3 bits (207), Expect(4) = 1e-79
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 7/94 (7%)
Frame = +2
Query: 2051 LLYLNLTRHDIS-------QFVNNPFSSHWDATIHLLRYLKGCASKGLFYSATGSFCLTA 2209
L+YL TR DIS QF++ P H+ A + +L+Y+K KGLF+ ++ L
Sbjct: 782 LIYLTNTRADISFSVNHLSQFMDQPTDVHYQAALRILKYVKNAPGKGLFFPSSSDLTLKG 841
Query: 2210 YSDLD*ATCKDNRRSIIGYYVFLGEYLVSWKTKK 2311
YSD D A+C D RRS+ G+ FLG L+SWK+KK
Sbjct: 842 YSDSDWASCSDTRRSVTGFSFFLGPALISWKSKK 875
Score = 38.5 bits (88), Expect(4) = 1e-79
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +1
Query: 2308 KKHTIVSRSSVEVEYRALISTVCEMQRITFLASYMLLSLQVPIPLYARN 2454
KK VS+SS E EYRAL + CE Q +++L L PI L+ N
Sbjct: 874 KKQATVSKSSAEAEYRALAQSTCEAQWLSYLLHDFGLHSFHPIVLFCDN 922
Score = 142 bits (357), Expect(3) = 4e-38
Identities = 72/168 (42%), Positives = 99/168 (58%)
Frame = +3
Query: 201 FGIPLLSYLVDDYSRGIWTYLISHKTQVPYLLEKFILMAKNQFQNAIKTFRTDNGTEFVN 380
FG +VDD SR W Y + HK++V L FI + +NQF +K R+DNG EF+
Sbjct: 164 FGHKFFLTIVDDKSRHTWVYFMKHKSEVADHLSSFITLIENQFGKKVKCVRSDNGPEFL- 222
Query: 381 TQCTTLFHNHGIIHQNSFVYTP*QNGIMERKHRHLLDTARVILFLSNLPIDFWTFSLITA 560
+H GI+HQ S V TP QNGI+ERKH+H++ AR ++ SNLP FW +++ A
Sbjct: 223 --LKNFYHEKGILHQTSCVETPQQNGIVERKHQHIMTVARALVMQSNLPKSFWFYAVSHA 280
Query: 561 KYLINILPSSLLH*KTPYELNYNKPPGYYVLRPFSCLTFDTNIYFLRK 704
+LIN PSS L K PYE+ YN P ++ F CL + T ++ RK
Sbjct: 281 VFLINRQPSSFLENKIPYEIIYNALPDLAGIKVFGCLAYATTLHHNRK 328
Score = 40.8 bits (94), Expect(3) = 4e-38
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 80 CDICHMSKQCRHSFPSCPTFASTLFELVHVDVWG-SNHSGIFWH 208
C++C+++KQ + F T A +F+L+HVD+WG + + IF H
Sbjct: 123 CNVCYLAKQRQLPFSHSVTKADEIFDLLHVDIWGPTTPASIFGH 166
Score = 26.9 bits (58), Expect(3) = 4e-38
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 701 KTKFDSRAHKCIFLVYELGQKGYELFNL 784
+ KFD R +C+FL ++ KG L++L
Sbjct: 327 RKKFDPRGRRCVFLGFKPQVKGSILYDL 354