BLASTX nr result
ID: Rehmannia27_contig00002841
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00002841
(718 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011072579.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio... 236 6e-71
ref|XP_012856584.1| PREDICTED: transcription initiation factor T... 192 3e-54
gb|EPS69927.1| hypothetical protein M569_04832, partial [Genlise... 184 6e-53
ref|XP_002264851.2| PREDICTED: transcription initiation factor T... 181 3e-50
ref|XP_009800090.1| PREDICTED: transcription initiation factor T... 179 3e-49
emb|CDP11601.1| unnamed protein product [Coffea canephora] 172 4e-48
ref|XP_009588628.1| PREDICTED: transcription initiation factor T... 171 8e-47
ref|XP_002521336.1| PREDICTED: transcription initiation factor T... 168 9e-46
ref|XP_012068890.1| PREDICTED: transcription initiation factor T... 170 1e-45
ref|XP_006465927.1| PREDICTED: transcription initiation factor T... 166 1e-44
ref|XP_015870487.1| PREDICTED: transcription initiation factor T... 164 2e-44
ref|XP_007024608.1| Transcription initiation factor TFIID subuni... 165 3e-44
ref|XP_015869683.1| PREDICTED: transcription initiation factor T... 164 4e-44
ref|XP_015871717.1| PREDICTED: transcription initiation factor T... 164 6e-44
ref|XP_007024607.1| Transcription initiation factor TFIID subuni... 165 1e-43
ref|XP_007024609.1| Transcription initiation factor TFIID subuni... 165 1e-43
ref|XP_007024610.1| Transcription initiation factor TFIID subuni... 165 1e-43
ref|XP_015871343.1| PREDICTED: transcription initiation factor T... 164 1e-43
ref|XP_015871342.1| PREDICTED: transcription initiation factor T... 164 2e-43
ref|XP_002299594.1| transcription initiation factor IID subunit ... 164 2e-43
>ref|XP_011072579.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor
TFIID subunit 12b [Sesamum indicum]
Length = 604
Score = 236 bits (602), Expect = 6e-71
Identities = 129/189 (68%), Positives = 132/189 (69%), Gaps = 1/189 (0%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
SGNL SALMGQTGHLPMLSG TSPRQK FMQGSQFHPGNSPGQ
Sbjct: 163 SGNLPRSALMGQTGHLPMLSGQAAAAAAQFNLQNQFLTSPRQKTGFMQGSQFHPGNSPGQ 222
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS 420
SLPGMQAMGMMGSLNLSSQLRANG AY+QQRMTP N+TRTS
Sbjct: 223 SLPGMQAMGMMGSLNLSSQLRANGMHAYAQQRMTPSQLRQQLSQQNALTAGQGQNITRTS 282
Query: 421 FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF-XXXXXXXXXXXXXXXAS 597
FMNAQI+GLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF AS
Sbjct: 283 FMNAQIAGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFRLQQHRQQQLLIQQQLAS 342
Query: 598 SQLHQNSVG 624
SQLHQNSVG
Sbjct: 343 SQLHQNSVG 351
>ref|XP_012856584.1| PREDICTED: transcription initiation factor TFIID subunit 12b
[Erythranthe guttata]
Length = 628
Score = 192 bits (489), Expect = 3e-54
Identities = 112/188 (59%), Positives = 123/188 (65%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
SGNL SALMGQTGHLPMLSG TSPRQKA F+QGSQFHPGNS GQ
Sbjct: 201 SGNLPRSALMGQTGHLPMLSGQAAAQFNLQNQFL---TSPRQKAGFVQGSQFHPGNSAGQ 257
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS 420
S+PGM GMMGSLNL+ R NG+L Y+QQRMT N+TR S
Sbjct: 258 SVPGM---GMMGSLNLT---RPNGSLPYTQQRMTTAQLRQQLNTQTALNAAQGQNITRAS 311
Query: 421 FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXASS 600
FMNAQISG+AQNGQ GMMQNAI+QQQWLKQ+PAISSPN+SS+ ASS
Sbjct: 312 FMNAQISGMAQNGQQGMMQNAINQQQWLKQIPAISSPNASSY---RLQQHRLLQQQIASS 368
Query: 601 QLHQNSVG 624
QLHQNSVG
Sbjct: 369 QLHQNSVG 376
>gb|EPS69927.1| hypothetical protein M569_04832, partial [Genlisea aurea]
Length = 406
Score = 184 bits (468), Expect = 6e-53
Identities = 104/187 (55%), Positives = 118/187 (63%)
Frame = +1
Query: 64 GNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQS 243
GNL+ SAL+ Q HLPMLSG TSPRQKA FMQGSQFHPGNSP QS
Sbjct: 37 GNLTRSALVSQA-HLPMLSGQAAGAAAQLNMQNQFLTSPRQKAGFMQGSQFHPGNSPAQS 95
Query: 244 LPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTSF 423
GMQAMGMMGSLNLSSQLRANGTLAY+QQRMTP N++R S
Sbjct: 96 FSGMQAMGMMGSLNLSSQLRANGTLAYAQQRMTPSQIRQQLSQQNALTAGQAQNMSRMSL 155
Query: 424 MNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXASSQ 603
MN Q+S LAQNG +MQNA++QQQWLKQ+P ++SPN SSF +S
Sbjct: 156 MNPQLSALAQNGSSNVMQNALTQQQWLKQIP-LTSPN-SSFRLQNRQQQLFLQQQLTASH 213
Query: 604 LHQNSVG 624
LHQNS+G
Sbjct: 214 LHQNSMG 220
>ref|XP_002264851.2| PREDICTED: transcription initiation factor TFIID subunit 12b [Vitis
vinifera] gi|297743015|emb|CBI35882.3| unnamed protein
product [Vitis vinifera]
Length = 587
Score = 181 bits (460), Expect = 3e-50
Identities = 103/188 (54%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
Frame = +1
Query: 64 GNLSHSALMGQTGHL-PMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
GNLS SALMGQTGHL PMLSG TSPRQKA +QGSQFHPGN+PGQ
Sbjct: 138 GNLSRSALMGQTGHLSPMLSGQAAAAAAVAQFSLL--TSPRQKAGLVQGSQFHPGNAPGQ 195
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS 420
SL GMQA+GMMG LNLSSQLR NGTL Y+QQR+ + RTS
Sbjct: 196 SLSGMQAIGMMGPLNLSSQLRPNGTLTYAQQRINQGQMRQQLTQQSQLTPSQAQSRPRTS 255
Query: 421 ---FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXX 591
FMN Q+S L QNGQPGM+QN++SQQQWLKQMPA+S+P S S+
Sbjct: 256 SLAFMNPQLSSLTQNGQPGMLQNSLSQQQWLKQMPAMSTPGSPSYRLQPRQQVLYQQQLA 315
Query: 592 ASSQLHQN 615
+S QLHQN
Sbjct: 316 SSPQLHQN 323
>ref|XP_009800090.1| PREDICTED: transcription initiation factor TFIID subunit 12b
[Nicotiana sylvestris]
Length = 647
Score = 179 bits (455), Expect = 3e-49
Identities = 103/194 (53%), Positives = 116/194 (59%), Gaps = 6/194 (3%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
SGNL+ +ALMGQTGHLPMLSG PRQKA MQG+QFH GNS GQ
Sbjct: 217 SGNLTRAALMGQTGHLPMLSGQAAAAVAQFNLQSQFLNPPRQKAGLMQGNQFHTGNSHGQ 276
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTP---XXXXXXXXXXXXXXXXXXXNLT 411
SL G+QAMGMMGSLN+SSQLRANG LAY+QQR+ NL
Sbjct: 277 SLQGIQAMGMMGSLNMSSQLRANGALAYAQQRVNQNQLRQQLSQQNPLTTAQKISVQNLP 336
Query: 412 RTSFMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXXXX 582
RTSF+N Q+ GL QNGQ +MQN SQQQWLKQMPAISSPNS S+
Sbjct: 337 RTSFINPQLPGLTQNGQSTIMQNNSSQQQWLKQMPAISSPNSPSYRLQPQRQQQPMLMQQ 396
Query: 583 XXXASSQLHQNSVG 624
+S QLHQN +G
Sbjct: 397 QLTSSQQLHQNLIG 410
>emb|CDP11601.1| unnamed protein product [Coffea canephora]
Length = 438
Score = 172 bits (437), Expect = 4e-48
Identities = 103/189 (54%), Positives = 114/189 (60%), Gaps = 2/189 (1%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
SGNLS SALMGQTGHLPMLSG TSPRQKA MQGSQ HPG+S GQ
Sbjct: 9 SGNLSRSALMGQTGHLPMLSGQAAAAAAQFDLQSPFLTSPRQKAGMMQGSQLHPGSSTGQ 68
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXN--LTR 414
+LPGMQAMGMMG + SQLRANG AY+QQR+ + R
Sbjct: 69 ALPGMQAMGMMGPI---SQLRANGPTAYAQQRINQGLRQHLSPQSQLAISQKLQTQGVPR 125
Query: 415 TSFMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXA 594
TS MNAQ+S LAQNGQP +MQN+ISQQQWLKQMP SPNS S+
Sbjct: 126 TSLMNAQLSALAQNGQPALMQNSISQQQWLKQMP---SPNSPSY-RLQQQRQQFLSQQQL 181
Query: 595 SSQLHQNSV 621
SSQLHQNS+
Sbjct: 182 SSQLHQNSM 190
>ref|XP_009588628.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
[Nicotiana tomentosiformis]
Length = 500
Score = 171 bits (432), Expect = 8e-47
Identities = 101/196 (51%), Positives = 114/196 (58%), Gaps = 8/196 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXX--TSPRQKASFMQGSQFHPGNSP 234
SGNL+ +ALMGQTGHLPML G PRQKA MQG+QFH GNS
Sbjct: 210 SGNLTRAALMGQTGHLPMLPGQAAAAAAVAQFNLQSQFLNPPRQKAGLMQGNQFHTGNSH 269
Query: 235 GQSLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTP---XXXXXXXXXXXXXXXXXXXN 405
GQSL G+QAMGMMGSLN+SSQLRANG LAY+ QR+ N
Sbjct: 270 GQSLQGIQAMGMMGSLNMSSQLRANGALAYAHQRVNQNQLRQQLSQQNPLTTTQKISVQN 329
Query: 406 LTRTSFMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
L RTSF+N Q+ GL QNGQ +MQN SQQQWLKQMPAISSPNS S+
Sbjct: 330 LPRTSFINPQLPGLTQNGQSTIMQNNSSQQQWLKQMPAISSPNSPSYRLQSQRQQQPMLM 389
Query: 577 XXXXXASSQLHQNSVG 624
+S QLHQN +G
Sbjct: 390 QQQLTSSQQLHQNLIG 405
>ref|XP_002521336.1| PREDICTED: transcription initiation factor TFIID subunit 12b
[Ricinus communis] gi|223539414|gb|EEF41004.1| protein
with unknown function [Ricinus communis]
Length = 523
Score = 168 bits (426), Expect = 9e-46
Identities = 95/188 (50%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Frame = +1
Query: 70 LSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSLP 249
LS SAL+GQ+GHLPML+G SPRQKA +QG+QFHPG+SPGQ L
Sbjct: 70 LSRSALLGQSGHLPMLTGAGAVAAAAAAAQLNLLASPRQKAGLVQGTQFHPGSSPGQPLQ 129
Query: 250 GMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS--- 420
GMQAMGMMGSLNL+SQLR NG L ++QQR+ NL+RTS
Sbjct: 130 GMQAMGMMGSLNLTSQLRPNGPLTFAQQRLNAGQMRQQLAQQNPLTSSQVPNLSRTSSLA 189
Query: 421 FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXA-S 597
FMN Q+SGL QN QP MMQN++ QQQWLKQM + P S S A S
Sbjct: 190 FMNPQLSGLTQNAQPSMMQNSLPQQQWLKQMTGMPGPASPSLRLQQRQSQVLLQQQLASS 249
Query: 598 SQLHQNSV 621
SQLHQNS+
Sbjct: 250 SQLHQNSM 257
>ref|XP_012068890.1| PREDICTED: transcription initiation factor TFIID subunit 12b
isoform X1 [Jatropha curcas]
Length = 636
Score = 170 bits (430), Expect = 1e-45
Identities = 94/163 (57%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Frame = +1
Query: 67 NLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSL 246
NLS SAL+GQ GHLP+L G SPRQKA +QGSQFHPG SPGQ L
Sbjct: 187 NLSRSALLGQNGHLPILPGPAAVAAAAQLNLL---ASPRQKAGLVQGSQFHPGTSPGQPL 243
Query: 247 PGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS-- 420
GMQAMG+MGSLNLSSQLR N LAY+QQR+ NL+RTS
Sbjct: 244 QGMQAMGVMGSLNLSSQLRPNSALAYAQQRINAGQMRQQLAQQNSLTSSQVPNLSRTSSL 303
Query: 421 -FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF 546
FMN Q+SGL N QPGMMQN++SQQQWLKQMPAIS P S SF
Sbjct: 304 AFMNPQLSGLVPNAQPGMMQNSLSQQQWLKQMPAISGPASPSF 346
>ref|XP_006465927.1| PREDICTED: transcription initiation factor TFIID subunit 12b
[Citrus sinensis]
Length = 593
Score = 166 bits (421), Expect = 1e-44
Identities = 103/196 (52%), Positives = 115/196 (58%), Gaps = 8/196 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLP-MLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPG 237
S LS S L+GQTGHLP MLSG SPRQK + GSQFHPGNSPG
Sbjct: 143 SPTLSRSGLIGQTGHLPGMLSGQASAAAAQFNLQSPLMASPRQKPGVVPGSQFHPGNSPG 202
Query: 238 QSLPGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRT 417
QSLPGMQAMG+ LNLSS LRAN Y+QQRM NL+RT
Sbjct: 203 QSLPGMQAMGI---LNLSSHLRANPL--YAQQRMNQGQIRQQLSQQNPLTSPQIQNLSRT 257
Query: 418 S----FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
S FMN Q+SGLAQNGQPGMMQN++SQQQWLKQMPA+S+P S SF
Sbjct: 258 SSSLAFMNPQLSGLAQNGQPGMMQNSLSQQQWLKQMPAMSAPGSPSFRLQQHQRQPPVLL 317
Query: 577 XXXXXASSQLHQNSVG 624
+S QLHQNS+G
Sbjct: 318 QQQLASSPQLHQNSMG 333
>ref|XP_015870487.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like,
partial [Ziziphus jujuba]
Length = 501
Score = 164 bits (416), Expect = 2e-44
Identities = 99/195 (50%), Positives = 116/195 (59%), Gaps = 8/195 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
+GNLS SALMGQ+G LPMLSG SPRQKA +QGSQFHPGNSPGQ
Sbjct: 226 AGNLSRSALMGQSGPLPMLSGAAAAAAAQFNLQNQLLASPRQKAGLVQGSQFHPGNSPGQ 285
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTL--AYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTR 414
+L GMQAMGMMGS+NL+SQLRANG L +Y+QQR NL R
Sbjct: 286 ALQGMQAMGMMGSMNLNSQLRANGALLASYAQQRSNQGPIRQQLSQQSQLTSQQVQNLPR 345
Query: 415 TS---FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
+S FMN +SGLAQNGQ +M N++SQQQWLKQMP IS P S S
Sbjct: 346 SSSLAFMN-PLSGLAQNGQQAIMPNSLSQQQWLKQMPPISGPGSPSLRLQHQRQQVLLQQ 404
Query: 577 XXXXXASSQLHQNSV 621
+S+QLHQ+S+
Sbjct: 405 QQQFASSNQLHQSSM 419
>ref|XP_007024608.1| Transcription initiation factor TFIID subunit A isoform 2
[Theobroma cacao] gi|508779974|gb|EOY27230.1|
Transcription initiation factor TFIID subunit A isoform
2 [Theobroma cacao]
Length = 552
Score = 165 bits (417), Expect = 3e-44
Identities = 99/189 (52%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Frame = +1
Query: 67 NLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSL 246
NL SAL+GQ+GHLPMLSG SPRQKA +QGSQFHPGN GQSL
Sbjct: 218 NLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSL 277
Query: 247 PGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS-- 420
GMQAMGMM NLSSQLRANG L Y+Q R+ +L RTS
Sbjct: 278 QGMQAMGMM---NLSSQLRANGNL-YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQ 333
Query: 421 -FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXAS 597
F+N Q+SGLAQ+GQPGMMQN++ QQQWLKQMP+IS P S SF +S
Sbjct: 334 AFINPQLSGLAQSGQPGMMQNSLLQQQWLKQMPSISGPGSPSFRLQRQSQVLLPQQLASS 393
Query: 598 S-QLHQNSV 621
S QLHQNS+
Sbjct: 394 SPQLHQNSM 402
>ref|XP_015869683.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like,
partial [Ziziphus jujuba]
Length = 553
Score = 164 bits (416), Expect = 4e-44
Identities = 99/195 (50%), Positives = 116/195 (59%), Gaps = 8/195 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
+GNLS SALMGQ+G LPMLSG SPRQKA +QGSQFHPGNSPGQ
Sbjct: 226 AGNLSRSALMGQSGPLPMLSGAAAAAAAQFNLQNQLLASPRQKAGLVQGSQFHPGNSPGQ 285
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTL--AYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTR 414
+L GMQAMGMMGS+NL+SQLRANG L +Y+QQR NL R
Sbjct: 286 ALQGMQAMGMMGSMNLNSQLRANGALLASYAQQRSNQGPIRQQLSQQSQLTSQQVQNLPR 345
Query: 415 TS---FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
+S FMN +SGLAQNGQ +M N++SQQQWLKQMP IS P S S
Sbjct: 346 SSSLAFMN-PLSGLAQNGQQAIMPNSLSQQQWLKQMPPISGPGSPSLRLQHQRQQVLLQQ 404
Query: 577 XXXXXASSQLHQNSV 621
+S+QLHQ+S+
Sbjct: 405 QQQFASSNQLHQSSM 419
>ref|XP_015871717.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
[Ziziphus jujuba]
Length = 593
Score = 164 bits (416), Expect = 6e-44
Identities = 99/195 (50%), Positives = 116/195 (59%), Gaps = 8/195 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
+GNLS SALMGQ+G LPMLSG SPRQKA +QGSQFHPGNSPGQ
Sbjct: 226 AGNLSRSALMGQSGPLPMLSGAAAAAAAQFNLQNQLLASPRQKAGLVQGSQFHPGNSPGQ 285
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTL--AYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTR 414
+L GMQAMGMMGS+NL+SQLRANG L +Y+QQR NL R
Sbjct: 286 ALQGMQAMGMMGSMNLNSQLRANGALLASYAQQRSNQGPIRQQLSQQSQLTSQQVQNLPR 345
Query: 415 TS---FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
+S FMN +SGLAQNGQ +M N++SQQQWLKQMP IS P S S
Sbjct: 346 SSSLAFMN-PLSGLAQNGQQAIMPNSLSQQQWLKQMPPISGPGSPSLRLQHQRQQVLLQQ 404
Query: 577 XXXXXASSQLHQNSV 621
+S+QLHQ+S+
Sbjct: 405 QQQFASSNQLHQSSM 419
>ref|XP_007024607.1| Transcription initiation factor TFIID subunit A isoform 1
[Theobroma cacao] gi|508779973|gb|EOY27229.1|
Transcription initiation factor TFIID subunit A isoform
1 [Theobroma cacao]
Length = 670
Score = 165 bits (417), Expect = 1e-43
Identities = 99/189 (52%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Frame = +1
Query: 67 NLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSL 246
NL SAL+GQ+GHLPMLSG SPRQKA +QGSQFHPGN GQSL
Sbjct: 218 NLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSL 277
Query: 247 PGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS-- 420
GMQAMGMM NLSSQLRANG L Y+Q R+ +L RTS
Sbjct: 278 QGMQAMGMM---NLSSQLRANGNL-YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQ 333
Query: 421 -FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXAS 597
F+N Q+SGLAQ+GQPGMMQN++ QQQWLKQMP+IS P S SF +S
Sbjct: 334 AFINPQLSGLAQSGQPGMMQNSLLQQQWLKQMPSISGPGSPSFRLQRQSQVLLPQQLASS 393
Query: 598 S-QLHQNSV 621
S QLHQNS+
Sbjct: 394 SPQLHQNSM 402
>ref|XP_007024609.1| Transcription initiation factor TFIID subunit A isoform 3
[Theobroma cacao] gi|508779975|gb|EOY27231.1|
Transcription initiation factor TFIID subunit A isoform
3 [Theobroma cacao]
Length = 671
Score = 165 bits (417), Expect = 1e-43
Identities = 99/189 (52%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Frame = +1
Query: 67 NLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSL 246
NL SAL+GQ+GHLPMLSG SPRQKA +QGSQFHPGN GQSL
Sbjct: 218 NLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSL 277
Query: 247 PGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS-- 420
GMQAMGMM NLSSQLRANG L Y+Q R+ +L RTS
Sbjct: 278 QGMQAMGMM---NLSSQLRANGNL-YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQ 333
Query: 421 -FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXAS 597
F+N Q+SGLAQ+GQPGMMQN++ QQQWLKQMP+IS P S SF +S
Sbjct: 334 AFINPQLSGLAQSGQPGMMQNSLLQQQWLKQMPSISGPGSPSFRLQRQSQVLLPQQLASS 393
Query: 598 S-QLHQNSV 621
S QLHQNS+
Sbjct: 394 SPQLHQNSM 402
>ref|XP_007024610.1| Transcription initiation factor TFIID subunit A isoform 4
[Theobroma cacao] gi|508779976|gb|EOY27232.1|
Transcription initiation factor TFIID subunit A isoform
4 [Theobroma cacao]
Length = 672
Score = 165 bits (417), Expect = 1e-43
Identities = 99/189 (52%), Positives = 113/189 (59%), Gaps = 4/189 (2%)
Frame = +1
Query: 67 NLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSL 246
NL SAL+GQ+GHLPMLSG SPRQKA +QGSQFHPGN GQSL
Sbjct: 218 NLPRSALIGQSGHLPMLSGAAAAAAAQLSLQPQLLASPRQKAGLVQGSQFHPGNPTGQSL 277
Query: 247 PGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRTS-- 420
GMQAMGMM NLSSQLRANG L Y+Q R+ +L RTS
Sbjct: 278 QGMQAMGMM---NLSSQLRANGNL-YAQHRINQGQMRQQLSQQTQLTSPQVQSLPRTSSQ 333
Query: 421 -FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXAS 597
F+N Q+SGLAQ+GQPGMMQN++ QQQWLKQMP+IS P S SF +S
Sbjct: 334 AFINPQLSGLAQSGQPGMMQNSLLQQQWLKQMPSISGPGSPSFRLQRQSQVLLPQQLASS 393
Query: 598 S-QLHQNSV 621
S QLHQNS+
Sbjct: 394 SPQLHQNSM 402
>ref|XP_015871343.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
isoform X2 [Ziziphus jujuba]
Length = 672
Score = 164 bits (416), Expect = 1e-43
Identities = 99/195 (50%), Positives = 116/195 (59%), Gaps = 8/195 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
+GNLS SALMGQ+G LPMLSG SPRQKA +QGSQFHPGNSPGQ
Sbjct: 226 AGNLSRSALMGQSGPLPMLSGAAAAAAAQFNLQNQLLASPRQKAGLVQGSQFHPGNSPGQ 285
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTL--AYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTR 414
+L GMQAMGMMGS+NL+SQLRANG L +Y+QQR NL R
Sbjct: 286 ALQGMQAMGMMGSMNLNSQLRANGALLASYAQQRSNQGPIRQQLSQQSQLTSQQVQNLPR 345
Query: 415 TS---FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
+S FMN +SGLAQNGQ +M N++SQQQWLKQMP IS P S S
Sbjct: 346 SSSLAFMN-PLSGLAQNGQQAIMPNSLSQQQWLKQMPPISGPGSPSLRLQHQRQQVLLQQ 404
Query: 577 XXXXXASSQLHQNSV 621
+S+QLHQ+S+
Sbjct: 405 QQQFASSNQLHQSSM 419
>ref|XP_015871342.1| PREDICTED: transcription initiation factor TFIID subunit 12b-like
isoform X1 [Ziziphus jujuba]
Length = 684
Score = 164 bits (416), Expect = 2e-43
Identities = 99/195 (50%), Positives = 116/195 (59%), Gaps = 8/195 (4%)
Frame = +1
Query: 61 SGNLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQ 240
+GNLS SALMGQ+G LPMLSG SPRQKA +QGSQFHPGNSPGQ
Sbjct: 226 AGNLSRSALMGQSGPLPMLSGAAAAAAAQFNLQNQLLASPRQKAGLVQGSQFHPGNSPGQ 285
Query: 241 SLPGMQAMGMMGSLNLSSQLRANGTL--AYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTR 414
+L GMQAMGMMGS+NL+SQLRANG L +Y+QQR NL R
Sbjct: 286 ALQGMQAMGMMGSMNLNSQLRANGALLASYAQQRSNQGPIRQQLSQQSQLTSQQVQNLPR 345
Query: 415 TS---FMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSF---XXXXXXXXXX 576
+S FMN +SGLAQNGQ +M N++SQQQWLKQMP IS P S S
Sbjct: 346 SSSLAFMN-PLSGLAQNGQQAIMPNSLSQQQWLKQMPPISGPGSPSLRLQHQRQQVLLQQ 404
Query: 577 XXXXXASSQLHQNSV 621
+S+QLHQ+S+
Sbjct: 405 QQQFASSNQLHQSSM 419
>ref|XP_002299594.1| transcription initiation factor IID subunit A family protein
[Populus trichocarpa] gi|222846852|gb|EEE84399.1|
transcription initiation factor IID subunit A family
protein [Populus trichocarpa]
Length = 656
Score = 164 bits (414), Expect = 2e-43
Identities = 97/187 (51%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
Frame = +1
Query: 67 NLSHSALMGQTGHLPMLSGXXXXXXXXXXXXXXXXTSPRQKASFMQGSQFHPGNSPGQSL 246
N S SAL+GQTGHLPML+G SPRQKA +QGSQFHPGNSPGQSL
Sbjct: 154 NSSRSALLGQTGHLPMLTGTAAAAAQLNLPSQLL-ASPRQKAGLVQGSQFHPGNSPGQSL 212
Query: 247 PGMQAMGMMGSLNLSSQLRANGTLAYSQQRMTPXXXXXXXXXXXXXXXXXXXNLTRT--- 417
G+QAMG+MGSLN+ SQ+R NG L Y+QQR+ +L RT
Sbjct: 213 QGIQAMGVMGSLNMGSQIRPNGALTYAQQRIN-AGSMRQQPVQQNPLTSQVQSLQRTPSM 271
Query: 418 SFMNAQISGLAQNGQPGMMQNAISQQQWLKQMPAISSPNSSSFXXXXXXXXXXXXXXXAS 597
++MN Q+SGLAQN QP MMQN++SQQQWLKQMP IS S SF AS
Sbjct: 272 AYMNPQMSGLAQNAQPTMMQNSLSQQQWLKQMPTISGSASPSFHLQPRQSQALIQQQLAS 331
Query: 598 S-QLHQN 615
S QLHQN
Sbjct: 332 SGQLHQN 338