BLASTX nr result

ID: Rehmannia27_contig00002779 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00002779
         (372 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011070050.1| PREDICTED: 50S ribosomal protein 5, chloropl...    93   6e-22
ref|XP_012839575.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    75   5e-15
ref|XP_009606723.1| PREDICTED: 50S ribosomal protein 5, chloropl...    56   1e-07
ref|XP_006339242.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    53   2e-06
ref|XP_009773937.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    53   2e-06
ref|XP_015055457.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    52   4e-06
ref|XP_009804387.1| PREDICTED: 50S ribosomal protein 5 alpha, ch...    53   5e-06

>ref|XP_011070050.1| PREDICTED: 50S ribosomal protein 5, chloroplastic [Sesamum indicum]
          Length = 146

 Score = 93.2 bits (230), Expect = 6e-22
 Identities = 43/58 (74%), Positives = 50/58 (86%)
 Frame = +2

Query: 197 AHPFSRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVDGTDSTAPEAPTPP 370
           A  F RLC+KSI+LHPK++VG +IQAPF+LNNRG  IVKASS VDGTDST PE+PTPP
Sbjct: 24  APTFFRLCNKSIALHPKSFVGARIQAPFLLNNRGAFIVKASSDVDGTDSTTPESPTPP 81


>ref|XP_012839575.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic
           [Erythranthe guttata] gi|604330696|gb|EYU35679.1|
           hypothetical protein MIMGU_mgv1a015792mg [Erythranthe
           guttata]
          Length = 146

 Score = 75.5 bits (184), Expect = 5e-15
 Identities = 36/57 (63%), Positives = 41/57 (71%)
 Frame = +2

Query: 200 HPFSRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVDGTDSTAPEAPTPP 370
           HPF RLC+KS++ HPK+  G +I APFVL NRG LIVKAS  VDG  ST  E PT P
Sbjct: 25  HPFLRLCNKSVTFHPKSDFGARIGAPFVLKNRGALIVKASLDVDGAGSTPSEPPTVP 81


>ref|XP_009606723.1| PREDICTED: 50S ribosomal protein 5, chloroplastic-like [Nicotiana
           tomentosiformis]
          Length = 142

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 197 AHPFSRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVDGTDSTAPEAPTP 367
           A P SRLC+  I+L PK+Y    IQAP + N RG LI KA++ +D   S  PE P P
Sbjct: 23  AFPSSRLCNSHITLKPKSYANYHIQAPLIFNKRGALIAKAAADIDSVGSDNPE-PAP 78


>ref|XP_006339242.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           [Solanum tuberosum]
          Length = 149

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +2

Query: 209 SRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVDGTDSTAPEAPTP 367
           SR C+  I+L PK+Y  G IQAPF+   RG LI  A++ +D   S  PE P+P
Sbjct: 34  SRFCNNHITLTPKSYANGNIQAPFIFKRRGALIATAAADIDSVGSDNPE-PSP 85


>ref|XP_009773937.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           [Nicotiana sylvestris]
          Length = 142

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 26/57 (45%), Positives = 33/57 (57%)
 Frame = +2

Query: 197 AHPFSRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVDGTDSTAPEAPTP 367
           A P SRLC+  ++L PK      IQAP + N RG LI KA++ +D   S  PE P P
Sbjct: 23  AFPSSRLCNSHVTLKPKLSANSHIQAPLIFNKRGALIAKAAADIDSVGSDNPE-PAP 78


>ref|XP_015055457.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           [Solanum pennellii]
          Length = 149

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 25/53 (47%), Positives = 33/53 (62%)
 Frame = +2

Query: 209 SRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVDGTDSTAPEAPTP 367
           SR C+  I+L PK+Y  G IQAPF+   RG LI  A++ +D   S  PE P+P
Sbjct: 34  SRFCNNHITLTPKSYANGYIQAPFIFQRRGALIATAAADIDSVGSDNPE-PSP 85


>ref|XP_009804387.1| PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like
           [Nicotiana sylvestris]
          Length = 184

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
 Frame = +2

Query: 197 AHPFSRLCHKSISLHPKAYVGGKIQAPFVLNNRGPLIVKASSGVD--GTDST 346
           ++PF R C+  I+L PK+YV   IQAPF+L  R  LI KA++ +D  G+D+T
Sbjct: 69  SYPFFRFCNDPIALQPKSYVNYYIQAPFILKGRSALIAKAATDIDSAGSDNT 120


Top