BLASTX nr result
ID: Rehmannia27_contig00001901
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00001901
(1406 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_008226562.1| PREDICTED: uncharacterized protein LOC103326... 211 3e-85
ref|XP_007032220.1| Retrotransposon protein, putative [Theobroma... 230 5e-81
ref|XP_010689289.1| PREDICTED: uncharacterized protein LOC104903... 224 1e-80
ref|XP_010665582.1| PREDICTED: uncharacterized protein LOC104882... 224 2e-80
emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera] 231 2e-80
ref|XP_015078330.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 200 4e-80
ref|XP_007044234.1| Retrotransposon protein [Theobroma cacao] gi... 261 1e-79
gb|ADN34141.1| ty3-gypsy retrotransposon protein [Cucumis melo s... 228 3e-79
gb|AAU10683.1| putative polyprotein [Oryza sativa Japonica Group] 234 2e-78
gb|AAX95749.1| Retrotransposon gag protein, putative [Oryza sati... 241 3e-78
gb|ABB46832.2| retrotransposon protein, putative, Ty3-gypsy subc... 242 6e-78
gb|AAK92604.1|AC078944_15 Putative retroelement [Oryza sativa Ja... 242 6e-78
gb|AAT85135.1| putative polyprotein [Oryza sativa Japonica Group] 238 1e-77
ref|XP_010325234.1| PREDICTED: uncharacterized protein LOC104648... 216 2e-77
ref|XP_010682237.1| PREDICTED: uncharacterized protein LOC104897... 215 9e-77
ref|XP_012840508.1| PREDICTED: uncharacterized protein LOC105960... 264 2e-76
ref|XP_013700562.1| PREDICTED: uncharacterized protein LOC106404... 225 2e-76
gb|KYP49089.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 249 2e-76
gb|KYP31910.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 249 3e-76
gb|AAX95377.1| Retrotransposon gag protein, putative [Oryza sati... 233 4e-76
>ref|XP_008226562.1| PREDICTED: uncharacterized protein LOC103326132 [Prunus mume]
Length = 817
Score = 211 bits (538), Expect(2) = 3e-85
Identities = 100/166 (60%), Positives = 131/166 (78%), Gaps = 8/166 (4%)
Frame = +3
Query: 621 LNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYE 800
LN VT++N+YPLPRID+LFDQL+ A +SK+DL+ GY+QL+I+++ +PKTAF+TRYG YE
Sbjct: 627 LNKVTVRNRYPLPRIDDLFDQLKDAKYFSKIDLRSGYHQLRIREDDVPKTAFRTRYGHYE 686
Query: 801 FVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALR 980
F+VMP GLTNAP FMDLM+RVF PYLD FV++FIDDI+V+SK+ E H+ HL +VL LR
Sbjct: 687 FLVMPFGLTNAPAAFMDLMNRVFRPYLDHFVIVFIDDILVYSKTLEGHKKHLRLVLRTLR 746
Query: 981 EHKLYAKFSKCEFWLNEVTFLGHIRSGD--------EDVMWEMEEE 1094
+LYAKFSKC+FWL+ V FLGH+ S + +DV +E EE
Sbjct: 747 RKQLYAKFSKCQFWLDRVVFLGHVISTEAPLTRLTRKDVAFEWTEE 792
Score = 134 bits (336), Expect(2) = 3e-85
Identities = 69/187 (36%), Positives = 104/187 (55%)
Frame = +1
Query: 1 GASQITDSIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLC 180
G D + C +++E+ +ANLI L + + D ILGMD L H A DC+ K V L
Sbjct: 439 GEVMYADRVFRECYVQVEDAWLEANLIPLELVDLDNILGMDWLEKHHASVDCYRKEVTLW 498
Query: 181 KLGKPVVELSGRARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEY 360
+P V G R+ +ISAI A++ + G G+LA II+ + + ++P+VSE+
Sbjct: 499 SPRQPKVIFRGERRILPTCLISAITAKRLLKKGCEGFLAHIIDTREITLNLEDIPVVSEF 558
Query: 361 LNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRP 540
+VF +L +PP+R+++F +E+ PG I TPYRMA +++GFIRP
Sbjct: 559 PDVFPDDLPGLPPEREIEFTVELLPGNNPIYLTPYRMAPAELRELKIQLQELVDMGFIRP 618
Query: 541 STSPWEA 561
S SPW A
Sbjct: 619 SVSPWGA 625
>ref|XP_007032220.1| Retrotransposon protein, putative [Theobroma cacao]
gi|508711249|gb|EOY03146.1| Retrotransposon protein,
putative [Theobroma cacao]
Length = 1480
Score = 230 bits (587), Expect(2) = 5e-81
Identities = 111/179 (62%), Positives = 141/179 (78%)
Frame = +3
Query: 576 KKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKE 755
K+ + R+C + LN VT+KNKYPLPRID+LFDQLQGA +SK+DL+ GY+QL+I+ E
Sbjct: 689 KELKDSWRIC--WIKLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNE 746
Query: 756 GIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSR 935
IPKTAF+TRYG YEF+VM GLTNAP FMDLM+RVF PYLDKFV++FIDDI+++SKSR
Sbjct: 747 DIPKTAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKFVVVFIDDILIYSKSR 806
Query: 936 EHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRSGDEDVMWEMEEEILRQYP 1112
E HE HL +VL+ LREH+LYAKFSKCEFWL V FLGH+ S + + + E + ++P
Sbjct: 807 EEHEQHLKIVLQILREHRLYAKFSKCEFWLERVAFLGHVVSREGIQVDTKKIEAVEKWP 865
Score = 100 bits (250), Expect(2) = 5e-81
Identities = 49/147 (33%), Positives = 87/147 (59%)
Frame = +1
Query: 34 TCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSG 213
+C +++++ NL++L ++D+ILGMD LS A DC++K V+ G+P + G
Sbjct: 538 SCVVRVKDKDTSVNLVVLDTLDFDVILGMDWLSPCHASVDCYHKLVRFDFPGEPSFSIQG 597
Query: 214 RARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTI 393
+ +IS I AR+ + G GYLA + + + +V +V E+++VF +EL+
Sbjct: 598 DMSNAPTNLISVISARRLLRQGCIGYLAVVKDSQAKIGDVTQVSVVKEFVDVFPEELSGF 657
Query: 394 PPDRKVQFAIEIFPGTASIARTPYRMA 474
PP+R+++F I++ P T ++ PYRMA
Sbjct: 658 PPEREIEFCIDLIPDTRPMSIPPYRMA 684
>ref|XP_010689289.1| PREDICTED: uncharacterized protein LOC104903021 [Beta vulgaris subsp.
vulgaris]
Length = 1126
Score = 224 bits (570), Expect(2) = 1e-80
Identities = 105/146 (71%), Positives = 124/146 (84%)
Frame = +3
Query: 621 LNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYE 800
LNNVT+KNKYPLPRID+LFDQL GA ++SK+DL+ GY+QL+I + IPKTAF+TRYG YE
Sbjct: 665 LNNVTVKNKYPLPRIDDLFDQLVGAGVFSKIDLRSGYHQLRIAENDIPKTAFRTRYGHYE 724
Query: 801 FVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALR 980
F VMP GLTNAP VFMDLM+RVF PYLDKFV++FIDDI+++SK HE HL VL+ LR
Sbjct: 725 FTVMPFGLTNAPAVFMDLMNRVFRPYLDKFVVVFIDDILIYSKDASEHEEHLRTVLQVLR 784
Query: 981 EHKLYAKFSKCEFWLNEVTFLGHIRS 1058
E+KLYAKFSKCEFWL +V FLGHI S
Sbjct: 785 ENKLYAKFSKCEFWLEKVAFLGHIIS 810
Score = 105 bits (263), Expect(2) = 1e-80
Identities = 59/164 (35%), Positives = 92/164 (56%)
Frame = +1
Query: 70 ANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRARVSMPPIISA 249
A+LI P+ ++D+ILGMD LS H A+ DC + V + +G V R S IISA
Sbjct: 501 ADLIAFPLHDFDVILGMDWLSRHKAKIDCEKQKVSV--VGPSGVHEFYRG--SSLKIISA 556
Query: 250 IKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPDRKVQFAIEI 429
+ + + G YL + + K+E + +V I SE+++VF ++ +PP R V+F++++
Sbjct: 557 MTLKSYLRKGCPMYLCHVHDTSKEEPRVEDVRIASEFVDVFPDDIPGMPPRRDVEFSVDL 616
Query: 430 FPGTASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRPSTSPWEA 561
PGT I++ PYRMA ++ G+IRPS SPW A
Sbjct: 617 MPGTGPISKPPYRMAPAEMKELKAQLEELLDKGYIRPSVSPWGA 660
>ref|XP_010665582.1| PREDICTED: uncharacterized protein LOC104882864 [Beta vulgaris subsp.
vulgaris]
Length = 1303
Score = 224 bits (570), Expect(2) = 2e-80
Identities = 105/146 (71%), Positives = 124/146 (84%)
Frame = +3
Query: 621 LNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYE 800
LNNVT+KNKYPLPRID+LFDQL GA ++SK+DL+ GY+QL+I + IPKTAF+TRYG YE
Sbjct: 511 LNNVTVKNKYPLPRIDDLFDQLVGAGVFSKIDLRSGYHQLRIAENDIPKTAFRTRYGHYE 570
Query: 801 FVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALR 980
F VMP GLTNAP VFMDLM+RVF PYLDKFV++FIDDI+++SK HE HL VL+ LR
Sbjct: 571 FTVMPFGLTNAPAVFMDLMNRVFRPYLDKFVVVFIDDILIYSKDASEHEEHLRTVLQVLR 630
Query: 981 EHKLYAKFSKCEFWLNEVTFLGHIRS 1058
E+KLYAKFSKCEFWL +V FLGHI S
Sbjct: 631 ENKLYAKFSKCEFWLEKVAFLGHIIS 656
Score = 105 bits (261), Expect(2) = 2e-80
Identities = 58/164 (35%), Positives = 92/164 (56%)
Frame = +1
Query: 70 ANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRARVSMPPIISA 249
A+LI P+ ++D+ILGMD LS H A+ DC + V + +G V R S IISA
Sbjct: 347 ADLIAFPLHDFDVILGMDWLSRHKAKIDCEKQKVSV--VGPSGVHEFYRG--SSLKIISA 402
Query: 250 IKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPDRKVQFAIEI 429
+ + + G YL + + K+E + +V I +E+++VF ++ +PP R V+F++++
Sbjct: 403 LTLKSYLRKGCPMYLCHVHDTSKEEPRVEDVRIANEFVDVFPDDIPGMPPRRDVEFSVDL 462
Query: 430 FPGTASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRPSTSPWEA 561
PGT I++ PYRMA ++ G+IRPS SPW A
Sbjct: 463 MPGTGPISKPPYRMAPAEMKELKAQLEELLDKGYIRPSVSPWGA 506
>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
Length = 984
Score = 231 bits (588), Expect(2) = 2e-80
Identities = 104/156 (66%), Positives = 131/156 (83%)
Frame = +3
Query: 555 GSPVLLSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYY 734
G+P+L KKK+G+ RLCIDYR LN V ++NKYPL RID+LFDQLQGA ++SK+DLQ GY+
Sbjct: 145 GAPILFVKKKDGSMRLCIDYRELNKVIVRNKYPLSRIDDLFDQLQGACVFSKIDLQSGYH 204
Query: 735 QLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDI 914
QL ++ E +PKTAF+TRYG YEF+VMP GLTNAP FMDLM+RVF PYLD+FV +FIDDI
Sbjct: 205 QLMVRSEDVPKTAFRTRYGHYEFLVMPFGLTNAPAAFMDLMNRVFKPYLDQFVAVFIDDI 264
Query: 915 IVHSKSREHHEHHLIMVLEALREHKLYAKFSKCEFW 1022
+++S+SRE HE HL +VL+ LR+ +LYAK KCEFW
Sbjct: 265 LIYSRSREEHEGHLSIVLQTLRDKQLYAKLKKCEFW 300
Score = 98.2 bits (243), Expect(2) = 2e-80
Identities = 51/137 (37%), Positives = 84/137 (61%), Gaps = 1/137 (0%)
Frame = +1
Query: 73 NLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRARVSMPP-IISA 249
+L+LL + ++D+ILGMD L+ + A +C K V G+P R V P +ISA
Sbjct: 4 DLVLLDLQDFDVILGMDWLASYHASVNCFEKRVTFSIPGQPKFSFE-RKHVDRPLCMISA 62
Query: 250 IKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPDRKVQFAIEI 429
++A + G G+LA +++ D + ++PIV EY +VF ++L +PP+R+V+F I++
Sbjct: 63 LRASSLLKKGCQGFLASVMSNESDLK-LEDIPIVREYPDVFPEDLPGLPPEREVEFTIDL 121
Query: 430 FPGTASIARTPYRMAHV 480
PGT +++ PYRMA V
Sbjct: 122 VPGTGPMSKAPYRMAPV 138
>ref|XP_015078330.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107022151
[Solanum pennellii]
Length = 1581
Score = 200 bits (508), Expect(2) = 4e-80
Identities = 94/146 (64%), Positives = 117/146 (80%)
Frame = +3
Query: 621 LNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYE 800
LN VT+KN Y +PRID+LFDQLQGA+++SK+DL+ GY+QL+I+ IPKTAF+TRYG YE
Sbjct: 717 LNKVTVKNCYLMPRIDDLFDQLQGASVFSKIDLRSGYHQLRIRAADIPKTAFRTRYGHYE 776
Query: 801 FVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALR 980
F+VM GLTNAP FMDLM RVF PY+D FV+IFIDDI+V+S+ HE HL +VL+ L
Sbjct: 777 FLVMSFGLTNAPAAFMDLMTRVFRPYIDSFVIIFIDDILVYSRCWSEHEQHLRIVLQTLT 836
Query: 981 EHKLYAKFSKCEFWLNEVTFLGHIRS 1058
+ +LYA FSKCEFWL V FLGH+ S
Sbjct: 837 DQQLYANFSKCEFWLASVAFLGHVVS 862
Score = 128 bits (321), Expect(2) = 4e-80
Identities = 74/201 (36%), Positives = 107/201 (53%)
Frame = +1
Query: 1 GASQITDSIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLC 180
G + D + +C + I+ A+LI+L + ++D+ILGMD LS + DC+ KTV L
Sbjct: 526 GEFLVVDQVLRSCLVTIQGYDTRADLIMLDMIDFDVILGMDWLSPYHVVLDCYAKTVTLS 585
Query: 181 KLGKPVVELSGRARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEY 360
G P V + IIS I+AR+ + +G YLA I + ++ + VP+V EY
Sbjct: 586 MPGVPPVLWQATYSHTPTGIISFIRARRLVASGCLAYLAHIRDVSREGPSVDSVPVVREY 645
Query: 361 LNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRP 540
+VF +L +PP+R + FAI++ PGT I+ PYRMA +E GFIRP
Sbjct: 646 ADVFPTDLPGLPPERDIDFAIDLEPGTRPISLPPYRMAPAELRELSVQSKDLLEKGFIRP 705
Query: 541 STSPWEAQCFCQKKKMEHKGC 603
S SPW A Q K+ K C
Sbjct: 706 SVSPWGAPVL-QLNKVTVKNC 725
>ref|XP_007044234.1| Retrotransposon protein [Theobroma cacao] gi|508708169|gb|EOY00066.1|
Retrotransposon protein [Theobroma cacao]
Length = 381
Score = 261 bits (666), Expect = 1e-79
Identities = 122/169 (72%), Positives = 147/169 (86%)
Frame = +3
Query: 555 GSPVLLSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYY 734
G+PVL KKK+GT RLCIDYR LN VTIKNKYPLPRID+LFDQL+GA ++SK+DL+ GYY
Sbjct: 120 GAPVLFVKKKDGTLRLCIDYRQLNRVTIKNKYPLPRIDDLFDQLRGAMVFSKIDLRSGYY 179
Query: 735 QLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDI 914
QL+IK++ +PKTAF+TRYG YEF+VMP GLTNAP VFMDLM+RVF PYLDKFV++FIDDI
Sbjct: 180 QLRIKEQDVPKTAFRTRYGHYEFLVMPFGLTNAPAVFMDLMNRVFHPYLDKFVIVFIDDI 239
Query: 915 IVHSKSREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRSG 1061
+V+SK+ + H HL +VL+ LRE +LYAKFSKCEFWL EV FLGH+ SG
Sbjct: 240 LVYSKNDDEHAAHLRIVLQTLRERQLYAKFSKCEFWLKEVVFLGHVVSG 288
Score = 87.0 bits (214), Expect = 4e-15
Identities = 44/108 (40%), Positives = 64/108 (59%)
Frame = +1
Query: 262 KAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPDRKVQFAIEIFPGT 441
+ + G YLA++I+ K E + +VPIVSE+ +VF +L IPP+R+++F I++ PGT
Sbjct: 22 RLLQKGYPTYLAYVIDTSKGEPKLEDVPIVSEFPDVFPDDLPGIPPNRELEFPIDLLPGT 81
Query: 442 ASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRPSTSPWEAQCFCQKKK 585
A I+ PY+MA ++ GFIRPS SPW A KKK
Sbjct: 82 APISIPPYKMAPAELKELKAQLQVLVDKGFIRPSISPWGAPVLFVKKK 129
>gb|ADN34141.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
Length = 1359
Score = 228 bits (582), Expect(2) = 3e-79
Identities = 105/161 (65%), Positives = 134/161 (83%)
Frame = +3
Query: 576 KKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKE 755
KKK+ + RLCIDYR LN VT+KN+YPLP+ID+LFDQLQGATL+SK+DL+ GY+QL+IK
Sbjct: 497 KKKDRSMRLCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATLFSKIDLRSGYHQLRIKDR 556
Query: 756 GIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSR 935
+PKTAF +RYG YEF+VM LTNAP VFMDLM+RVF +LD FV++FI+DI+++SK
Sbjct: 557 DVPKTAFHSRYGHYEFIVMSFALTNAPSVFMDLMNRVFREFLDTFVIVFINDILIYSKIE 616
Query: 936 EHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRS 1058
HE HL MVL+ L+++KLYAKF KCEFWL +V+FLGH+ S
Sbjct: 617 AEHEEHLRMVLQTLQDNKLYAKFLKCEFWLKQVSFLGHVVS 657
Score = 97.1 bits (240), Expect(2) = 3e-79
Identities = 49/146 (33%), Positives = 84/146 (57%)
Frame = +1
Query: 37 CEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGR 216
C+I+I + L++L + ++D+ILGMD L+ + A DC K + +
Sbjct: 344 CQIEIAGHVIEVTLLVLDMLDFDVILGMDWLAANHASIDCSRKEIAFNPPSMANFKFKEE 403
Query: 217 ARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIP 396
S+P +ISA++A K ++ G LA +++ + + + P+V +Y +VF +EL +P
Sbjct: 404 GSRSLPKVISAMRASKLLSQGIWSILASVVDTREVDVSLSSKPMVRDYPDVFPEELPGLP 463
Query: 397 PDRKVQFAIEIFPGTASIARTPYRMA 474
P R+++FAIE+ GT I+R PYRMA
Sbjct: 464 PHREIEFAIELELGTVPISRAPYRMA 489
>gb|AAU10683.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1638
Score = 234 bits (597), Expect(2) = 2e-78
Identities = 107/161 (66%), Positives = 138/161 (85%)
Frame = +3
Query: 570 LSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIK 749
L++KK+ T+R+C+DYR LN VTIKNKYPLPRID+LFDQL+GA ++SK+DL+ GY+QL+I+
Sbjct: 767 LAEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLRIR 826
Query: 750 KEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSK 929
+E IPKTAF TRYGLYE VM GLTNAP FM+LM++VF +LDKFV++FIDDI+++SK
Sbjct: 827 EEDIPKTAFTTRYGLYECTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDILIYSK 886
Query: 930 SREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHI 1052
S E HE HL +VLE L+EH+LYAK SKC+FWL+EV FL H+
Sbjct: 887 SEEEHEQHLRLVLEKLKEHQLYAKSSKCDFWLSEVKFLRHV 927
Score = 88.2 bits (217), Expect(2) = 2e-78
Identities = 59/162 (36%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Frame = +1
Query: 1 GASQITDSIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLC 180
G S + + I+I+ F ANLILL + D+ILGMD L+ DC N+TV L
Sbjct: 617 GNSSTSVQFSPSITIEIQRSPFLANLILLGSKDLDVILGMDWLTKFKGVIDCANRTVTLT 676
Query: 181 -KLGKPVV---ELSGRARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPI 348
+ G+ VV +S + VS+ I I ++ + K+ + E+PI
Sbjct: 677 NEKGETVVYKSPVSPKQGVSLNQIEVEIP---------------VVTEEKNSRKLEEIPI 721
Query: 349 VSEYLNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMA 474
V EY VF ++LTT+PP R+++F I++ PGTA I + PYRMA
Sbjct: 722 VCEYPKVFPEDLTTMPPKREIEFRIDLAPGTAPIYKRPYRMA 763
>gb|AAX95749.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|110288789|gb|AAP52632.2| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1608
Score = 241 bits (615), Expect(2) = 3e-78
Identities = 110/163 (67%), Positives = 141/163 (86%)
Frame = +3
Query: 570 LSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIK 749
+ ++K+ TQR+C+DYR LN+VTIKNKYPLPRID+LFDQL+GAT++SK+DL+ GY+QL+IK
Sbjct: 763 VKRQKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIK 822
Query: 750 KEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSK 929
+E IPKTAF TRYGL+E VM GLTNAP FM+LM++VF YLDKFV++FIDDI+++S+
Sbjct: 823 EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSR 882
Query: 930 SREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRS 1058
++E HE HL + LE LREH+LYAKFSKCEFWL EV FLGH+ S
Sbjct: 883 TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLFEVKFLGHVIS 925
Score = 80.9 bits (198), Expect(2) = 3e-78
Identities = 51/144 (35%), Positives = 71/144 (49%)
Frame = +1
Query: 43 IKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRAR 222
I+I+ V F ANLILL + D+ILGMD L+ H DC NK V L VV + +
Sbjct: 638 IEIQGVPFLANLILLESKDLDVILGMDWLAKHKGVIDCANKKVTLTSYDGRVVTVHALSS 697
Query: 223 VSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPD 402
S+ ++ I + E+PIV EY +VF +L +PP
Sbjct: 698 ESLRSRLNQIT-------------------------LEEIPIVREYPDVFPDDLPGMPPK 732
Query: 403 RKVQFAIEIFPGTASIARTPYRMA 474
R ++F I++ PGT I + PYRMA
Sbjct: 733 RDIEFRIDLVPGTTPIHKRPYRMA 756
>gb|ABB46832.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1662
Score = 242 bits (618), Expect(2) = 6e-78
Identities = 110/163 (67%), Positives = 142/163 (87%)
Frame = +3
Query: 570 LSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIK 749
+ ++K+ TQR+C+DYR LN+VTIKNKYPLPRID+LFDQL+GAT++SK+DL+ GY+QL+IK
Sbjct: 822 VKRQKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIK 881
Query: 750 KEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSK 929
+E IPKTAF TRYGL+E VM GLTNAP FM+LM++VF YLDKFV++FIDDI+++S+
Sbjct: 882 EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNQVFMEYLDKFVVVFIDDILIYSR 941
Query: 930 SREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRS 1058
++E HE HL + LE LREH+LYAKFSKCEFWL+EV FLGH+ S
Sbjct: 942 TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVIS 984
Score = 78.6 bits (192), Expect(2) = 6e-78
Identities = 50/144 (34%), Positives = 71/144 (49%)
Frame = +1
Query: 43 IKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRAR 222
I+I+ V F ANLILL + D+ILGMD L+ H DC N+ V L VV + +
Sbjct: 697 IEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLTSNDGRVVTVHALSS 756
Query: 223 VSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPD 402
S+ ++ I + E+PIV EY +VF +L +PP
Sbjct: 757 ESLRSRLNQIT-------------------------LEEIPIVREYPDVFPDDLPGMPPK 791
Query: 403 RKVQFAIEIFPGTASIARTPYRMA 474
R ++F I++ PGT I + PYRMA
Sbjct: 792 RDIEFRIDLVPGTTPIHKRPYRMA 815
>gb|AAK92604.1|AC078944_15 Putative retroelement [Oryza sativa Japonica Group]
Length = 1571
Score = 242 bits (618), Expect(2) = 6e-78
Identities = 110/163 (67%), Positives = 142/163 (87%)
Frame = +3
Query: 570 LSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIK 749
+ ++K+ TQR+C+DYR LN+VTIKNKYPLPRID+LFDQL+GAT++SK+DL+ GY+QL+IK
Sbjct: 830 VKRQKDHTQRMCVDYRALNDVTIKNKYPLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIK 889
Query: 750 KEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSK 929
+E IPKTAF TRYGL+E VM GLTNAP FM+LM++VF YLDKFV++FIDDI+++S+
Sbjct: 890 EEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNQVFMEYLDKFVVVFIDDILIYSR 949
Query: 930 SREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRS 1058
++E HE HL + LE LREH+LYAKFSKCEFWL+EV FLGH+ S
Sbjct: 950 TKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVIS 992
Score = 78.6 bits (192), Expect(2) = 6e-78
Identities = 50/144 (34%), Positives = 71/144 (49%)
Frame = +1
Query: 43 IKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRAR 222
I+I+ V F ANLILL + D+ILGMD L+ H DC N+ V L VV + +
Sbjct: 705 IEIKGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLTSNDGRVVTVHALSS 764
Query: 223 VSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPD 402
S+ ++ I + E+PIV EY +VF +L +PP
Sbjct: 765 ESLRSRLNQIT-------------------------LEEIPIVREYPDVFPDDLPGMPPK 799
Query: 403 RKVQFAIEIFPGTASIARTPYRMA 474
R ++F I++ PGT I + PYRMA
Sbjct: 800 RDIEFRIDLVPGTTPIHKRPYRMA 823
>gb|AAT85135.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1038
Score = 238 bits (606), Expect(2) = 1e-77
Identities = 108/166 (65%), Positives = 141/166 (84%)
Frame = +3
Query: 555 GSPVLLSKKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYY 734
G+PV+ +KK+ T+R+C+DYR LN VTIKNKYPLPRID+LFDQL+GA ++SK+DL+ GY+
Sbjct: 423 GAPVIFVEKKDKTKRMCVDYRALNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYH 482
Query: 735 QLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDI 914
QL+I++E IPKTAF T YGL++ VM GLTNAP FM+LM++VF +LDKFV++FIDDI
Sbjct: 483 QLRIREEDIPKTAFTTWYGLFKCTVMSFGLTNAPAFFMNLMNKVFMEFLDKFVVVFIDDI 542
Query: 915 IVHSKSREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHI 1052
+++SKS E HE HL +VLE L+EH+LYAKFSKC+FWL EV FLGH+
Sbjct: 543 LIYSKSEEQHEQHLRLVLEKLKEHQLYAKFSKCDFWLLEVKFLGHV 588
Score = 82.0 bits (201), Expect(2) = 1e-77
Identities = 51/144 (35%), Positives = 77/144 (53%)
Frame = +1
Query: 43 IKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRAR 222
I+I+ F +NLILL + D+ILGMD L+ H DC ++T+ L + A
Sbjct: 280 IEIKKSLFLSNLILLESKDLDVILGMDWLTRHKGVIDCASRTITLTNDKGEKITFRSPA- 338
Query: 223 VSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQELTTIPPD 402
P +S +A T + + + +D +PIV EY VF ++LTT+PP
Sbjct: 339 ----PQMSVASLNQAATEDQTEIMEKSLKRLED------IPIVQEYPEVFPEDLTTMPPK 388
Query: 403 RKVQFAIEIFPGTASIARTPYRMA 474
R+++F I++ PGTA I + PYRMA
Sbjct: 389 REIEFWIDLAPGTAPIYKRPYRMA 412
>ref|XP_010325234.1| PREDICTED: uncharacterized protein LOC104648891 [Solanum
lycopersicum]
Length = 1908
Score = 216 bits (551), Expect(2) = 2e-77
Identities = 108/168 (64%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
Frame = +3
Query: 558 SPVLLSKKKNGTQRLCI-DYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYY 734
+P L + K+ Q L DYR LN VT+K KYPLPRID+LFDQLQGA+L+SK+DL+ GY+
Sbjct: 266 APAELKELKDQLQDLLSKDYRQLNKVTVKIKYPLPRIDDLFDQLQGASLFSKIDLRSGYH 325
Query: 735 QLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDI 914
QLKI+ IPKTAF TRYG YEF+ M GLTNAP FM+LM+ VF PYLD FV++FIDDI
Sbjct: 326 QLKIRASDIPKTAFWTRYGHYEFLGMSFGLTNAPAAFMELMNGVFRPYLDSFVIVFIDDI 385
Query: 915 IVHSKSREHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRS 1058
+V+ K+ E H HL +VL+ LRE KLYAKFSKCEFWL VTFLGH+ S
Sbjct: 386 LVYYKTEEDHVRHLRIVLQRLREEKLYAKFSKCEFWLTSVTFLGHVVS 433
Score = 102 bits (255), Expect(2) = 2e-77
Identities = 56/158 (35%), Positives = 88/158 (55%)
Frame = +1
Query: 1 GASQITDSIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLC 180
G + D + +C + + +LI+L + ++D+ILGMD LS + DC+ KTV L
Sbjct: 109 GKPLVVDRVYRSCLVSLAGYDTWVDLIILGMVDFDVILGMDWLSPYHVVLDCNAKTVTLA 168
Query: 181 KLGKPVVELSGRARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEY 360
G P VE + +IS I+A++ + G YLAFI + + + VP+V E+
Sbjct: 169 MPGVPRVEWKSVSGSYPRKVISFIRAQRLVERGCLSYLAFIWDTSVEPPSMDSVPVVQEF 228
Query: 361 LNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMA 474
L+VF +L +PP+R + FAI++ P T I+ PYRMA
Sbjct: 229 LDVFPSDLPGVPPNRDIDFAIDLEPDTKPISIPPYRMA 266
>ref|XP_010682237.1| PREDICTED: uncharacterized protein LOC104897115 [Beta vulgaris subsp.
vulgaris]
Length = 909
Score = 215 bits (547), Expect(2) = 9e-77
Identities = 102/146 (69%), Positives = 122/146 (83%)
Frame = +3
Query: 621 LNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYE 800
LNNVT+KNKYPLPRID+LFDQL GA ++SK+DL+ GY+QL+I + PKTAF+TRYG YE
Sbjct: 238 LNNVTVKNKYPLPRIDDLFDQLVGAGVFSKIDLRSGYHQLRIAENDNPKTAFRTRYGHYE 297
Query: 801 FVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALR 980
F VMP GLTNAP VFMDLM+RVF PYLDKFV++F+DDI+++SK HE HL VL+ LR
Sbjct: 298 FTVMPFGLTNAPAVFMDLMNRVFRPYLDKFVVVFMDDILIYSKDASEHEEHLRTVLQVLR 357
Query: 981 EHKLYAKFSKCEFWLNEVTFLGHIRS 1058
E+KLYAKFSKCEF L +V FLGHI S
Sbjct: 358 ENKLYAKFSKCEFGLEKVAFLGHIIS 383
Score = 102 bits (253), Expect(2) = 9e-77
Identities = 60/180 (33%), Positives = 96/180 (53%)
Frame = +1
Query: 22 SIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVV 201
SI + I + A+LI P+ ++D+ILGMD LS H A+ DC + V + +G V
Sbjct: 58 SIPSDVPIMCGSTTLVADLIAFPLHDFDVILGMDWLSRHKAKKDCEKQKVYV--VGPSGV 115
Query: 202 ELSGRARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSEYLNVFSQE 381
R S IISA+ + + G YL + + K+E I +V I +E+++VF +
Sbjct: 116 HEFYRG--SSLKIISALTLKSYLRKGCPMYLCHVHDTSKEEPRIEDVRIANEFVDVFPDD 173
Query: 382 LTTIPPDRKVQFAIEIFPGTASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRPSTSPWEA 561
+ +PP R V+F++++ PGT I++ PYR+ ++ G+IRPS SPW A
Sbjct: 174 IPGMPPRRDVEFSVDLIPGTGPISKPPYRIVPAEMKELKAQLEELLDKGYIRPSVSPWGA 233
>ref|XP_012840508.1| PREDICTED: uncharacterized protein LOC105960845 [Erythranthe guttata]
Length = 823
Score = 264 bits (675), Expect = 2e-76
Identities = 124/197 (62%), Positives = 157/197 (79%)
Frame = +3
Query: 474 PCGIARIESSVTETDGSRLYQTKYVTMGSPVLLSKKKNGTQRLCIDYRGLNNVTIKNKYP 653
P + ++ + E + + + G+PVL KKK+GT RLCIDYR LN VTIKNKYP
Sbjct: 541 PLELKELKDQIQELIDKKFVRPSFSPWGAPVLFVKKKDGTLRLCIDYRELNKVTIKNKYP 600
Query: 654 LPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNA 833
LPRID+LFDQLQG+T+YSK+DL+ GY+QLKIKKE IPK+AF+TRYG YEFVVMP GLTNA
Sbjct: 601 LPRIDDLFDQLQGSTVYSKIDLRSGYHQLKIKKEDIPKSAFRTRYGHYEFVVMPFGLTNA 660
Query: 834 PVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALREHKLYAKFSKC 1013
P FMDLM+R+F YLD+FV++FIDDI+++S++ E HE HL +VL+ LRE++LYAKFSKC
Sbjct: 661 PAAFMDLMNRIFRKYLDQFVIVFIDDILIYSQNDEEHEEHLRIVLQTLRENQLYAKFSKC 720
Query: 1014 EFWLNEVTFLGHIRSGD 1064
EFWL +V FLGH+ S D
Sbjct: 721 EFWLRQVHFLGHVISKD 737
Score = 113 bits (282), Expect = 4e-23
Identities = 69/195 (35%), Positives = 104/195 (53%), Gaps = 5/195 (2%)
Frame = +1
Query: 16 TDSIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKP 195
+D C I+I+ +++LI+LPI +++ILGMD LS AQ +C KTV L
Sbjct: 388 SDLFFKDCPIQIQKKPLNSDLIILPIDHFEVILGMDWLSKFKAQINCATKTVYLSLPHGQ 447
Query: 196 VVELSGRARVSMPPIISAIKARKAITNGAHGYLAFII-----NKPKDET*IHEVPIVSEY 360
VE G S+ I+SA+K K G +L I+ NKP+ +VP V ++
Sbjct: 448 TVEFQGSYSPSLQ-ILSAVKTLKLARKGHCCHLVDIVEISDENKPEPS----QVPTVCDF 502
Query: 361 LNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMAHVXXXXXXXXXXXXMEVGFIRP 540
+VF+++L +PPDR+++F I + PG I++ PYRMA + ++ F+RP
Sbjct: 503 PDVFTEDLPGLPPDREIEFEINLIPGATPISKAPYRMAPLELKELKDQIQELIDKKFVRP 562
Query: 541 STSPWEAQCFCQKKK 585
S SPW A KKK
Sbjct: 563 SFSPWGAPVLFVKKK 577
>ref|XP_013700562.1| PREDICTED: uncharacterized protein LOC106404383 [Brassica napus]
Length = 1127
Score = 225 bits (574), Expect(2) = 2e-76
Identities = 111/178 (62%), Positives = 139/178 (78%), Gaps = 1/178 (0%)
Frame = +3
Query: 582 KNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGI 761
K+G+ RLCIDYRG+NNVTIK+KYPLPRIDEL DQLQGAT +SK+DL GY+Q+ I + I
Sbjct: 617 KDGSMRLCIDYRGINNVTIKDKYPLPRIDELLDQLQGATWFSKIDLASGYHQIPISETDI 676
Query: 762 PKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREH 941
KTAF+TRYG +EFVVMP GLTNAP FM LM+ VF YLD+FV+IFIDDI+++S+S E
Sbjct: 677 MKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNEVFRDYLDEFVIIFIDDILIYSRSAEE 736
Query: 942 HEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHIRSGDEDVMWEMEE-EILRQYP 1112
HE HL +VLE LR+ KL+AK SKC FW EV FLGH R +E V + E+ ++++P
Sbjct: 737 HERHLRLVLERLRDQKLFAKLSKCRFWKREVGFLGH-RVSEEGVAVDPEKIAAIKEWP 793
Score = 90.5 bits (223), Expect(2) = 2e-76
Identities = 51/147 (34%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Frame = +1
Query: 43 IKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLCKLGKPVVELSGRAR 222
I I+++ F A+L++LP+ Y++ILGMD LS + AQ DC + + +P + G
Sbjct: 455 IIIQDMVFPADLLVLPLESYEVILGMDWLSSYRAQLDCGRGNIVFERDTQPPLAYHGIVP 514
Query: 223 VSMPPIISAIKARKAITNGAHGYLAFIINKP---KDET*IHEVPIVSEYLNVFSQELTTI 393
++SA++ + G YL ++ P + E + E+P+V EY +VF + L +
Sbjct: 515 SDGASLVSALRIENLLEKGEEVYLVTLVAGPVEDEKEQNMEEIPVVREYEDVF-KALEGL 573
Query: 394 PPDRKVQFAIEIFPGTASIARTPYRMA 474
PP R+ F+I + PG+A+IA+ PYRMA
Sbjct: 574 PPSRRNPFSITLEPGSAAIAKAPYRMA 600
>gb|KYP49089.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 290
Score = 249 bits (636), Expect = 2e-76
Identities = 113/195 (57%), Positives = 152/195 (77%)
Frame = +3
Query: 474 PCGIARIESSVTETDGSRLYQTKYVTMGSPVLLSKKKNGTQRLCIDYRGLNNVTIKNKYP 653
P + ++ + E + + G+PVLL KKK+G+ RLC+DYR LN VTIKNKYP
Sbjct: 62 PTELVELKKQIEELQEKQFIRPSVSPWGAPVLLVKKKDGSMRLCVDYRQLNKVTIKNKYP 121
Query: 654 LPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNA 833
LPRID+L DQL GA ++SK+DL+ GY+Q++++ E +PKTAF+TRYG YE++VMP G+TNA
Sbjct: 122 LPRIDDLMDQLVGACVFSKIDLRSGYHQIRVRAEDVPKTAFRTRYGHYEYLVMPFGVTNA 181
Query: 834 PVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALREHKLYAKFSKC 1013
P VFMD M+R+F PYLD+FV++FIDDI+V+SK+RE H HL +VL+ L+E +LYAK SKC
Sbjct: 182 PGVFMDYMNRIFHPYLDRFVVVFIDDILVYSKTREEHAEHLRIVLQTLKEKQLYAKLSKC 241
Query: 1014 EFWLNEVTFLGHIRS 1058
EFWLN V+FLGH+ S
Sbjct: 242 EFWLNSVSFLGHVIS 256
Score = 72.0 bits (175), Expect = 2e-10
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 331 IHEVPIVSEYLNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMAHVXXXXXXXXXX 510
+ E+P+V E+ VF ++++++PP R+++F+I++ PGT+ I+ PYRM+
Sbjct: 14 LDEIPLVKEFPEVFPKDVSSLPPKREIEFSIDLIPGTSPISIAPYRMSPTELVELKKQIE 73
Query: 511 XXMEVGFIRPSTSPWEAQCFCQKKK 585
E FIRPS SPW A KKK
Sbjct: 74 ELQEKQFIRPSVSPWGAPVLLVKKK 98
>gb|KYP31910.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 308
Score = 249 bits (637), Expect = 3e-76
Identities = 114/195 (58%), Positives = 155/195 (79%)
Frame = +3
Query: 474 PCGIARIESSVTETDGSRLYQTKYVTMGSPVLLSKKKNGTQRLCIDYRGLNNVTIKNKYP 653
P ++ ++ V E ++ + G+PVLL KKK+G RLC+DYR LN +TIKNKYP
Sbjct: 3 PAELSELKKQVEELLEKQMIRPSVSPWGAPVLLVKKKDGGVRLCVDYRQLNKLTIKNKYP 62
Query: 654 LPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKEGIPKTAFQTRYGLYEFVVMPVGLTNA 833
LPRID+L DQL+GAT++SK+DL+ GY+Q+++K+E IPKTAF+TRYG YE+VVMP G+TNA
Sbjct: 63 LPRIDDLMDQLRGATVFSKIDLRSGYHQIRVKEEDIPKTAFRTRYGHYEYVVMPFGVTNA 122
Query: 834 PVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSREHHEHHLIMVLEALREHKLYAKFSKC 1013
P +FMD M+R+F P+LDKFV++FIDDI+V+S+S E H HL +VL+ L+E +L+AK SKC
Sbjct: 123 PAIFMDYMNRIFRPFLDKFVVVFIDDILVYSRSMEEHREHLRIVLQVLKEKQLFAKLSKC 182
Query: 1014 EFWLNEVTFLGHIRS 1058
EFWL+EV FLGH+ S
Sbjct: 183 EFWLSEVKFLGHVIS 197
>gb|AAX95377.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62733997|gb|AAX96106.1| retrotransposon protein,
putative, Ty3-gypsy sub-class [Oryza sativa Japonica
Group] gi|77550108|gb|ABA92905.1| retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1261
Score = 233 bits (594), Expect(2) = 4e-76
Identities = 105/159 (66%), Positives = 138/159 (86%)
Frame = +3
Query: 576 KKKNGTQRLCIDYRGLNNVTIKNKYPLPRIDELFDQLQGATLYSKLDLQQGYYQLKIKKE 755
+KK+ T+R+C+DYR LN VTIKNKYPLPR+D+LFDQL+GA ++SK+DL+ GY+QL+I++E
Sbjct: 583 QKKDRTKRMCVDYRALNEVTIKNKYPLPRLDDLFDQLKGAKVFSKIDLRSGYHQLRIREE 642
Query: 756 GIPKTAFQTRYGLYEFVVMPVGLTNAPVVFMDLMHRVF*PYLDKFVMIFIDDIIVHSKSR 935
IPKTAF TRYGLYE +VM GLTNAP FM+ M++VF +LDKFV++FIDDI+++SKS
Sbjct: 643 DIPKTAFTTRYGLYECMVMSFGLTNAPAFFMNPMNKVFMEFLDKFVVVFIDDILIYSKSE 702
Query: 936 EHHEHHLIMVLEALREHKLYAKFSKCEFWLNEVTFLGHI 1052
E +E HL +VLE L+EH+LYAKFSKC+FWL+EV FLGH+
Sbjct: 703 EEYEQHLRLVLEKLKEHQLYAKFSKCDFWLSEVKFLGHV 741
Score = 81.6 bits (200), Expect(2) = 4e-76
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Frame = +1
Query: 1 GASQITDSIDNTCEIKIENVHFDANLILLPISEYDIILGMD*LSGHFAQTDCHNKTVKLC 180
G S + S + I+I F ANLILL + D+ILGMD L+ DC N+TV L
Sbjct: 427 GNSSTSISYSPSVLIEIHRSRFLANLILLESKDLDVILGMDWLTKFKGVIDCANRTVTLT 486
Query: 181 -KLGKPVVELSGRARVSMPPIISAIKARKAITNGAHGYLAFIINKPKDET*IHEVPIVSE 357
+ G+ VV S + ++ I+ + + K + ++PIV E
Sbjct: 487 NEKGETVVYKS------------LVSPKQGISLNQIEVENLVATEEKSSRKLEDIPIVCE 534
Query: 358 YLNVFSQELTTIPPDRKVQFAIEIFPGTASIARTPYRMA 474
Y VF ++LTT+PP R+++F +++ PGT I + YRMA
Sbjct: 535 YPEVFPEDLTTMPPKREIEFRVDLAPGTTPIYKRSYRMA 573