BLASTX nr result
ID: Rehmannia27_contig00001534
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00001534
(2042 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB ... 791 0.0
ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB ... 695 0.0
ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-... 625 0.0
ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-... 619 0.0
ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB ... 616 0.0
ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB ... 616 0.0
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB ... 614 0.0
ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB ... 613 0.0
ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB ... 609 0.0
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB ... 610 0.0
ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus nota... 606 0.0
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac... 604 0.0
ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB ... 602 0.0
gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 599 0.0
ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-... 600 0.0
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB ... 598 0.0
gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sin... 599 0.0
ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB ... 598 0.0
ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB ... 597 0.0
ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-... 596 0.0
>ref|XP_011086680.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Sesamum
indicum]
Length = 613
Score = 791 bits (2044), Expect = 0.0
Identities = 430/587 (73%), Positives = 455/587 (77%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXX 1862
V SSK+R + +FRTQCI T+L+FE+L+LS LEAIPN VPADR
Sbjct: 27 VYSSKSREATSFRTQCILSTTPPPTLTATTTVLDFEKLQLSSLEAIPNQVPADRSWSTPT 86
Query: 1861 XXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXX 1682
MLDLE LPSLDAHPI+ A NKP YVGA PPSEV LGAN D ETLLTS
Sbjct: 87 SSAKTAMLDLEGLPSLDAHPITTAANKPWTYVGAIAPPSEVTLGANLDTETLLTSEEAVI 146
Query: 1681 XXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAER 1502
AMMVSHHK TK +S+ TG+ +V+T + EK+QLAHLAER
Sbjct: 147 AAAASEALALAKAAVKVAKDAAMMVSHHKPTKSNSSATGMFADVNTPIFEKNQLAHLAER 206
Query: 1501 VVVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXX 1322
V +R+ KVAE+GLGE PA+ L ESDDVEPSAEELEFLEAQL+KSIAVRSKRQT
Sbjct: 207 VDIRDAKVAEVGLGENYPAAHSLTESDDVEPSAEELEFLEAQLSKSIAVRSKRQTERRAR 266
Query: 1321 XXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSE 1142
ANI VQDVDY+DP SEEQVLS
Sbjct: 267 RTRAAEKAAANIVSVKSGSSSRKKRSAVQDVDYSDPLRYLRGTTSSSRLLTASEEQVLSS 326
Query: 1141 GIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRL 962
GIQVLLKLERLQ ELT+R GG PTF+QWAAAAGVD +TLRKQINYGILCKDKMIKSNIRL
Sbjct: 327 GIQVLLKLERLQMELTQRYGGQPTFAQWAAAAGVDQKTLRKQINYGILCKDKMIKSNIRL 386
Query: 961 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQ 782
VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQ
Sbjct: 387 VISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQ 446
Query: 781 SRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRS 602
SRTIRLPFHMVEATYRVKEARKQLYSENGR PDDEEVAEATGLSMKRLSAVMLTPKAPRS
Sbjct: 447 SRTIRLPFHMVEATYRVKEARKQLYSENGRHPDDEEVAEATGLSMKRLSAVMLTPKAPRS 506
Query: 601 LDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLE 422
LDQKIGINQDLKPSDVIADPEAET+EDLLIKQFMKQDLAKVLDSLNPREKQVV WRFGLE
Sbjct: 507 LDQKIGINQDLKPSDVIADPEAETAEDLLIKQFMKQDLAKVLDSLNPREKQVVIWRFGLE 566
Query: 421 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 281
DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP
Sbjct: 567 DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMP 613
>ref|XP_012849681.1| PREDICTED: RNA polymerase sigma factor sigB [Erythranthe guttata]
gi|604314290|gb|EYU27177.1| hypothetical protein
MIMGU_mgv1a003367mg [Erythranthe guttata]
Length = 589
Score = 695 bits (1793), Expect = 0.0
Identities = 399/588 (67%), Positives = 433/588 (73%), Gaps = 2/588 (0%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXT-MLEFEELKLSPLEAIPNSVPADRXXXXX 1865
V+SSK+R SINFRTQC+ T +LEFE+L+LSPLE IPNS+PADR
Sbjct: 27 VHSSKSRESINFRTQCVLSTTSPPPTMAATTTLLEFEKLQLSPLETIPNSLPADRSWTTP 86
Query: 1864 XXXXXXTMLDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXX 1685
+LDL+KL SL +A NK L YVG+ GPPSE+NLGAN DKE L+TS
Sbjct: 87 RAKTS--LLDLDKLTSLP-----VASNKTLTYVGSVGPPSEINLGANLDKEALITSDEAV 139
Query: 1684 XXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAE 1505
AMMVS H+STKPD+ + EVDTS AE
Sbjct: 140 ITAAASEALALAKAAVKVAKDAAMMVSLHRSTKPDTKS---FLEVDTS----------AE 186
Query: 1504 RVVVREPKVAEIGLGEINPASDPLAESDDVE-PSAEELEFLEAQLTKSIAVRSKRQTXXX 1328
RVVVRE AEIG GE + L ESDD E PSAEELE L+ QL+ SIAVRSKRQ
Sbjct: 187 RVVVRE---AEIGSGEND--DHVLGESDDSEEPSAEELELLDLQLSSSIAVRSKRQIERK 241
Query: 1327 XXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVL 1148
AN+ Q+VDY+DP SEEQVL
Sbjct: 242 VRRGRAAEKAAANVVSVKSGSSKKKRSPV-QEVDYSDPLRYLRATTSSTRLLTASEEQVL 300
Query: 1147 SEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNI 968
SEGIQVLLKLERLQ EL ER GG P++SQWAAAAGVD +TLR+QINYGILCKDKMIKSNI
Sbjct: 301 SEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAGVDQKTLREQINYGILCKDKMIKSNI 360
Query: 967 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS 788
RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS
Sbjct: 361 RLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLS 420
Query: 787 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAP 608
DQSRTIRLPFHMVEATYRVKEARKQLYSENGR+P+DEEVAEATGLSMKRLSAVMLTPK P
Sbjct: 421 DQSRTIRLPFHMVEATYRVKEARKQLYSENGRVPNDEEVAEATGLSMKRLSAVMLTPKPP 480
Query: 607 RSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFG 428
RSLDQKIG+NQDLKPS+VI+DPEAETSE+LLIKQFMKQDLA VLDSLNPREKQVVKWRFG
Sbjct: 481 RSLDQKIGVNQDLKPSEVISDPEAETSEELLIKQFMKQDLADVLDSLNPREKQVVKWRFG 540
Query: 427 LEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
+EDGRMKTLQEIGELMGVSRER+RQIESCAFRKLKNKKRTK LQQYVM
Sbjct: 541 IEDGRMKTLQEIGELMGVSRERVRQIESCAFRKLKNKKRTKQLQQYVM 588
>ref|XP_009761599.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
sylvestris]
Length = 629
Score = 625 bits (1613), Expect = 0.0
Identities = 350/590 (59%), Positives = 404/590 (68%), Gaps = 5/590 (0%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXX 1862
+ SK R I+ RTQCI T+L+ E+LKL +E + +SV A+R
Sbjct: 39 IQLSKGRDHIHLRTQCILATTSAATSTATSTVLDIEKLKLPSIEILSSSVAAERSWKPPS 98
Query: 1861 XXXXXTMLDLE--KLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 1688
+LD+ KL S +A+P S+A ++P Y GA GPP+E N + E L+TS
Sbjct: 99 TATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYTGAVGPPTEANTKSALATENLVTSDEA 157
Query: 1687 XXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 1508
++V H+ D G L E T+ E LA +
Sbjct: 158 VVAAAAAEAVALAKAALKFAKDAVLLVGHNNLKNSDDAGRGTLSEARTTPFESVPLAQPS 217
Query: 1507 ERVVVR---EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 1337
E VR E K +E+ E + D L +SDD+EPS EELE L++QL+ IAV+S RQT
Sbjct: 218 ETGRVRVGAEFKGSEMKWSESSLFEDSLTDSDDLEPSPEELEILQSQLSNVIAVKSTRQT 277
Query: 1336 XXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEE 1157
AN+ VQ+VDY+DP SEE
Sbjct: 278 ERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTASEE 337
Query: 1156 QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 977
Q LS GIQ LLKLERL++EL RCGG PT +QWAAAAGV+ +TLRK++NYGILCKDKMIK
Sbjct: 338 QELSRGIQDLLKLERLEQELAARCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKMIK 397
Query: 976 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 797
SNIRLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA KGFKFSTYAHWWIKQAVRK
Sbjct: 398 SNIRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRK 457
Query: 796 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 617
SLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRLP+DEEVAEATGLSMKRL+AVMLTP
Sbjct: 458 SLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVMLTP 517
Query: 616 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 437
KAPRSLDQKIG NQ LKPS+VIADPEAETSE++L+KQFM+QDL KVLD+LNPREKQVVKW
Sbjct: 518 KAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLEKVLDTLNPREKQVVKW 577
Query: 436 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 287
RFGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 578 RFGLADGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 627
>ref|XP_009599122.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nicotiana
tomentosiformis]
Length = 641
Score = 619 bits (1595), Expect = 0.0
Identities = 346/590 (58%), Positives = 404/590 (68%), Gaps = 5/590 (0%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXX 1862
+ SK R I+ RTQCI T+L+ E+LKL +E + +SV A+R
Sbjct: 51 IQLSKGRDHIHLRTQCILATTSAATSTATSTVLDIEKLKLPSIEILSSSVAAERSWKPPS 110
Query: 1861 XXXXXTMLDLE--KLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 1688
+LD+ KL S +A+P S+A ++P Y G GPP+E N + E L+TS
Sbjct: 111 TATSA-VLDIPRLKLLSFEANPDSVAPDRPWTYTGPVGPPTEANTKSVLATENLVTSDEA 169
Query: 1687 XXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 1508
++V H+ D G L E T+ E LA +
Sbjct: 170 VVAAAAAEAVALAKAALKFAKDVVLLVGHNNLKNSDDAGRGTLSEARTTPFESVHLAQPS 229
Query: 1507 E--RVVV-REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 1337
E RV V E K +E+ E + D L +SDD++PS EELE L++QL+ IAV+S RQT
Sbjct: 230 ETGRVGVGAEFKGSEMKWSESSLLEDSLTDSDDLDPSPEELEILQSQLSNVIAVKSTRQT 289
Query: 1336 XXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEE 1157
AN+ VQ+VDY+DP SEE
Sbjct: 290 ERKARRGRAAERAAANVVSVKSGSTSRKKRTSVQEVDYSDPLRYLRGTTGSSRLLTASEE 349
Query: 1156 QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 977
Q LS GIQ LKLERL++EL +RCGG PT +QWAAAAGV+ +TLRK++NYGILCKDKMIK
Sbjct: 350 QELSRGIQDQLKLERLEQELADRCGGQPTIAQWAAAAGVEQKTLRKRLNYGILCKDKMIK 409
Query: 976 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 797
SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDA KGFKFSTYAHWWIKQAVRK
Sbjct: 410 SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDAAKGFKFSTYAHWWIKQAVRK 469
Query: 796 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 617
SLSDQSRTIRLPFHMVEATYRVKEARKQL++ENGRLP+DEEVAEATGLSMKRL+AVMLTP
Sbjct: 470 SLSDQSRTIRLPFHMVEATYRVKEARKQLFTENGRLPNDEEVAEATGLSMKRLTAVMLTP 529
Query: 616 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 437
KAPRSLDQKIG NQ LKPS+VIADPEAETSE++L+KQFM+QDL +VLD+LNPREKQVVKW
Sbjct: 530 KAPRSLDQKIGFNQSLKPSEVIADPEAETSEEMLMKQFMRQDLERVLDTLNPREKQVVKW 589
Query: 436 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 287
RFGL DGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 590 RFGLADGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 639
>ref|XP_010052665.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Eucalyptus
grandis] gi|629111779|gb|KCW76739.1| hypothetical protein
EUGRSUZ_D01094 [Eucalyptus grandis]
Length = 588
Score = 616 bits (1589), Expect = 0.0
Identities = 335/522 (64%), Positives = 381/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL+ S N+P Y GA GPP+EVNLGA ETLLTS
Sbjct: 67 VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAA 126
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+M+ + S+ D+ + TS+ + ++L L ++
Sbjct: 127 SEAVTLAKAALKSAKHAALMIRNESSSNIDNKLE-LSSRTSTSLSKHAELLELEHSNILT 185
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
E E GL E N +S+D+EP+ EEL+ L+ QL KSIAVRS+RQT
Sbjct: 186 ELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERA 245
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ +Q+VDY+DP +EE LSEGIQ
Sbjct: 246 AEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQD 305
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLERLQ ELTERCGG P F+QWAAAAGVD +TLRK++NYG LCKDKMIKSNIRLVISI
Sbjct: 306 LLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISI 365
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 366 AKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 425
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV++TPKAPRSLDQK
Sbjct: 426 RLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQK 485
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS+VIADP AETSED+L+KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRM
Sbjct: 486 IGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRM 545
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 546 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 587
>ref|XP_010052664.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Eucalyptus
grandis]
Length = 601
Score = 616 bits (1589), Expect = 0.0
Identities = 335/522 (64%), Positives = 381/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL+ S N+P Y GA GPP+EVNLGA ETLLTS
Sbjct: 80 VLDMEKLRLPSLEVLTDSPTSNRPWTYTGAVGPPAEVNLGATLATETLLTSDEAVIAAAA 139
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+M+ + S+ D+ + TS+ + ++L L ++
Sbjct: 140 SEAVTLAKAALKSAKHAALMIRNESSSNIDNKLE-LSSRTSTSLSKHAELLELEHSNILT 198
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
E E GL E N +S+D+EP+ EEL+ L+ QL KSIAVRS+RQT
Sbjct: 199 ELMEPEGGLREGNVMQYSTDKSEDLEPTHEELQLLQVQLFKSIAVRSRRQTERKEIRERA 258
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ +Q+VDY+DP +EE LSEGIQ
Sbjct: 259 AEKAAANVVSVKSGSLSKKKRAALQEVDYSDPLRYLRGTTSSSRLLTATEETELSEGIQD 318
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLERLQ ELTERCGG P F+QWAAAAGVD +TLRK++NYG LCKDKMIKSNIRLVISI
Sbjct: 319 LLKLERLQVELTERCGGEPAFAQWAAAAGVDQKTLRKRLNYGRLCKDKMIKSNIRLVISI 378
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRG EKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 379 AKNYQGAGMNLQDLVQEGCRGLVRGCEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 438
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV++TPKAPRSLDQK
Sbjct: 439 RLPFHMVEATYRVKEARKQLYSENGRQPDNEEVAEATGLSMKRLNAVLMTPKAPRSLDQK 498
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS+VIADP AETSED+L+KQFM+QDL KVLD+LNPREKQVV+WRFGLEDGRM
Sbjct: 499 IGINQNLKPSEVIADPNAETSEDVLLKQFMRQDLEKVLDTLNPREKQVVRWRFGLEDGRM 558
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV+
Sbjct: 559 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVL 600
>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
Length = 613
Score = 614 bits (1583), Expect = 0.0
Identities = 347/589 (58%), Positives = 397/589 (67%), Gaps = 4/589 (0%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXX 1862
+ SK+R SI+ RTQCI T+L E+L+L +E + NSV A+R
Sbjct: 27 IQLSKSRDSIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPS 86
Query: 1861 XXXXXTM-LDLEKLPSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXX 1685
+ KLPS +A+P S+A ++P Y GA GPP+E AN E L S
Sbjct: 87 AATTTVPGIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAE----ANTKPEDSLASEEAI 142
Query: 1684 XXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAE 1505
M+V ++ D+ G L E T+ E LA E
Sbjct: 143 VAAAAAEAVALAKAALKGAQDAVMLVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPGE 202
Query: 1504 RV---VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTX 1334
V E +E+ + D L +SDD+EPS EELE L++QL+ IAV+S RQT
Sbjct: 203 TRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQTE 262
Query: 1333 XXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQ 1154
AN+ VQDVDY+DP SEEQ
Sbjct: 263 RKARRAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEEQ 322
Query: 1153 VLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKS 974
LS GIQ LLKLERLQ ELTERCGG PTF+QWAAAAGVD TLRK++NYGILCKDKMIKS
Sbjct: 323 ELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIKS 382
Query: 973 NIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 794
N+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS
Sbjct: 383 NVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKS 442
Query: 793 LSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPK 614
LSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR P+D EVAEATGLSMKRL+AVMLTPK
Sbjct: 443 LSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTPK 502
Query: 613 APRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWR 434
APRSLDQK+G N+ LKPS+V+ADP+AETSE++L KQFM+QDL KVLD+LNPREKQVV+WR
Sbjct: 503 APRSLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRWR 562
Query: 433 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 287
FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 563 FGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611
>ref|XP_015061066.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum pennellii]
Length = 613
Score = 613 bits (1581), Expect = 0.0
Identities = 347/590 (58%), Positives = 400/590 (67%), Gaps = 5/590 (0%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXX 1862
+ SK+R +I+ RTQCI T+L E+L+L +E + NSV A+R
Sbjct: 27 IQLSKSRDNIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSTS 86
Query: 1861 XXXXXTMLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 1688
+ D++KL PS +A+P S+A ++P Y GA GPP+E AN E L S
Sbjct: 87 AATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAE----ANTKPEDSLASEEA 141
Query: 1687 XXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 1508
M+V ++ D+ G L E T+ E LA
Sbjct: 142 IVAAAAAEAVALAKAALKGAQDAVMLVGYNNLKDSDNVGRGTLSEARTAPFESVHLAQPG 201
Query: 1507 ERV---VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 1337
E V E +E+ + D L +SDD+EPS EELE L++QL+ IAV+S RQT
Sbjct: 202 ETRGVGVCAELNGSEMKWTGSSLFRDTLTDSDDLEPSHEELEILQSQLSNVIAVKSNRQT 261
Query: 1336 XXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEE 1157
AN+ VQDVDY+DP SEE
Sbjct: 262 ERKARRAKAVERAAANVVSVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEE 321
Query: 1156 QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 977
Q LS GIQ LLKLERLQ ELTERCGG PTF+QWAAAAGVD TLRK++NYGILCKDKMIK
Sbjct: 322 QELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIK 381
Query: 976 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 797
SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK
Sbjct: 382 SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 441
Query: 796 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 617
SLSDQSRTIRLPFHMVEATYRVKEARKQL +ENGR P+D EVAEATGLSMKRL+AVMLTP
Sbjct: 442 SLSDQSRTIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEATGLSMKRLAAVMLTP 501
Query: 616 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 437
KAPRSLDQK+G N+ LKPS+V+ADP+AETSE++L KQFM+QDL KVLD+LNPREKQVV+W
Sbjct: 502 KAPRSLDQKVGFNESLKPSEVLADPDAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRW 561
Query: 436 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 287
RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 562 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611
>ref|XP_015895073.1| PREDICTED: RNA polymerase sigma factor sigB [Ziziphus jujuba]
Length = 573
Score = 609 bits (1571), Expect = 0.0
Identities = 330/525 (62%), Positives = 389/525 (74%), Gaps = 5/525 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+L+LEKL PSLDA+ S+ N+P Y GA GPP++ NL A ETLLTS
Sbjct: 52 VLNLEKLRLPSLDANSDSVTANRPWTYTGAIGPPAKANLEATLATETLLTSEEAVIAAAA 111
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
++++++ T+ +ST+ PE D ++ Q + V +
Sbjct: 112 AEAVTLAKAAVKVAKDATLLINNNPCTRAESTSL-FSPEDDALHLKWPQHMKTGQPVRLG 170
Query: 1489 E---PKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXX 1319
+ PK A++ + A + E+DD+EP+ EELE L++QL+ IAVRS+RQT
Sbjct: 171 DSMGPKTAQLDDYSMQCA---IKEADDLEPTHEELELLQSQLSNGIAVRSRRQTERKARR 227
Query: 1318 XXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEG 1139
A + +QD+D++DP +EE LSEG
Sbjct: 228 TRAAEKAAATVVSVKSGSTVRKKRASLQDIDHSDPLRYLRATTSTSRLLTATEEIELSEG 287
Query: 1138 IQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLV 959
IQ LLKLE+LQEELTERCG PTF+QWAAAAGVD +TLR++INYGILCKDKMIKSNIRLV
Sbjct: 288 IQDLLKLEKLQEELTERCGSQPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNIRLV 347
Query: 958 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQS 779
ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQS
Sbjct: 348 ISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQS 407
Query: 778 RTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSL 599
RTIRLPFHMVEATYRVKEARKQLYS+NGR PDDEEVAEATGLSMKRL+AV+LTPKAPRSL
Sbjct: 408 RTIRLPFHMVEATYRVKEARKQLYSKNGRHPDDEEVAEATGLSMKRLAAVLLTPKAPRSL 467
Query: 598 DQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLED 419
+QKIGINQ+LKPS+VIADP+AETSED+LI++FMKQDL KVLDSLNPREKQV++WRFG+ED
Sbjct: 468 EQKIGINQNLKPSEVIADPDAETSEDVLIRKFMKQDLDKVLDSLNPREKQVIRWRFGMED 527
Query: 418 GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 528 GRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLV 572
>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB [Solanum tuberosum]
Length = 613
Score = 610 bits (1573), Expect = 0.0
Identities = 348/590 (58%), Positives = 399/590 (67%), Gaps = 5/590 (0%)
Frame = -2
Query: 2041 VNSSKNRVSINFRTQCIXXXXXXXXXXXXXTMLEFEELKLSPLEAIPNSVPADRXXXXXX 1862
+ SK+R I+ RTQCI T+L E+L+L +E + NSV A+R
Sbjct: 27 IQLSKSRDHIHLRTQCILSTTSAVTSTATSTVLGIEKLQLPSIEILSNSVAAERSWKSPS 86
Query: 1861 XXXXXTMLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXX 1688
+ D++KL PS +A+P S+A ++P Y GA GPP+E AN E L S
Sbjct: 87 AATTT-VPDIQKLKLPSFEANPDSVAPDRPWTYTGAVGPPAE----ANTKPENSLASEEA 141
Query: 1687 XXXXXXXXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLA 1508
M+V ++ D+ G L E T+ E LA
Sbjct: 142 IVAAAAAEAVALAKAALKGAQDAVMLVGYNNLNDSDNVGRGTLSEARTAPFESVHLAQPG 201
Query: 1507 E--RV-VVREPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQT 1337
E RV V E +E+ + + L +SDD+EPS EELE L++QL+ IAV+S RQT
Sbjct: 202 ETRRVGVCAELNGSEMKWTGSSLFRETLTDSDDLEPSPEELEILQSQLSNVIAVKSNRQT 261
Query: 1336 XXXXXXXXXXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEE 1157
AN+ VQDVDY+DP SEE
Sbjct: 262 ERKAKRAKSVEKAAANVVTVKSGSTSRKKRASVQDVDYSDPLRYLRGTTCSSRLLTASEE 321
Query: 1156 QVLSEGIQVLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIK 977
Q LS GIQ LLKLERLQ ELTERCGG PTF+QWAAAAGVD TLRK++NYGILCKDKMIK
Sbjct: 322 QELSRGIQDLLKLERLQVELTERCGGQPTFTQWAAAAGVDQMTLRKRLNYGILCKDKMIK 381
Query: 976 SNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 797
SN+RLVISIAKNYQG GMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK
Sbjct: 382 SNVRLVISIAKNYQGVGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRK 441
Query: 796 SLSDQSRTIRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTP 617
SLSDQSR IRLPFHMVEATYRVKEARKQL +ENGR P+D EVAEA GLSMKRL+AVMLTP
Sbjct: 442 SLSDQSRMIRLPFHMVEATYRVKEARKQLLTENGRHPNDAEVAEAAGLSMKRLAAVMLTP 501
Query: 616 KAPRSLDQKIGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 437
KAPRSLDQKIG N+ LKPS+V+ADPEAETSE++L KQFM+QDL KVLD+LNPREKQVV+W
Sbjct: 502 KAPRSLDQKIGFNESLKPSEVLADPEAETSEEILTKQFMRQDLEKVLDTLNPREKQVVRW 561
Query: 436 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV 287
RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK LQQY+
Sbjct: 562 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKFLQQYI 611
>ref|XP_010097670.1| RNA polymerase sigma factor rpoD [Morus notabilis]
gi|587881690|gb|EXB70625.1| RNA polymerase sigma factor
rpoD [Morus notabilis]
Length = 574
Score = 606 bits (1562), Expect = 0.0
Identities = 332/522 (63%), Positives = 383/522 (73%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+L +EKL PSLDA+ S+ N+P Y GA GPP E N A ETLLTS
Sbjct: 61 VLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAAAA 120
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A++V ST+ +S + + +S + A A RV R
Sbjct: 121 AEAVTLAKAAVKVAKDAALLV--RPSTRAESIS------LVSSEARNIKTAQAASRV--R 170
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ AE+ L E +P D ES+D++P+ EEL L+ QL+KSIAVRS+RQ+
Sbjct: 171 DSLRAEMALIEDHPPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSERKAKRDRA 230
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ VQDVD++DP +EE LSEGIQ
Sbjct: 231 AEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIELSEGIQD 290
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE+LQEEL ERCGGPPTF+QWAAAAGVD +TLR++INYGILCKDKMIKSN+RLVISI
Sbjct: 291 LLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSNVRLVISI 350
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 351 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 410
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR P+DEEVAEATGLSMKRL+AV+LTPKAPRSL+QK
Sbjct: 411 RLPFHMVEATYRVKEARKQLYSENGRQPNDEEVAEATGLSMKRLAAVLLTPKAPRSLEQK 470
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS++IADP+AET ED+L +QFMKQDL KVLDSLN REKQV++WRFG++DGRM
Sbjct: 471 IGINQNLKPSEIIADPDAETLEDVLTRQFMKQDLDKVLDSLNQREKQVIRWRFGMDDGRM 530
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 531 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLI 572
>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
[Theobroma cacao]
Length = 623
Score = 604 bits (1558), Expect = 0.0
Identities = 332/531 (62%), Positives = 385/531 (72%), Gaps = 11/531 (2%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PS +AHP S+A ++P Y+GA GPPSE +LGA + LLTS
Sbjct: 91 VLDVEKLRLPSFEAHPNSVAVDRPWTYIGATGPPSEASLGATLATDNLLTSDEAVIAAAA 150
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERV-VV 1493
A+M ++ K + + G+ D S K L AER ++
Sbjct: 151 AEAVALARAAVKVAKDAALMAENYNYAKTEMKS-GVSFATD-SFTSKWALFTEAERAGII 208
Query: 1492 REPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXX 1313
+ E + E + + ESD++EP+ EELE LE QL++SIAVRS+RQT
Sbjct: 209 GDSPTDESEMEEDDSEQNSTTESDELEPTNEELEHLEEQLSRSIAVRSRRQTERKAKRTR 268
Query: 1312 XXXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQ 1133
AN+ +QDVDY+DP +EE LSEGIQ
Sbjct: 269 AAEKAAANVVSVKSGSTNRKRRGALQDVDYSDPLRYLRGTTSTSRLLTANEELELSEGIQ 328
Query: 1132 VLLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVIS 953
LLKLERLQEEL ERCGG PTF+QWAAAAGVD +TLR ++NYG+ CKDKMIKSNIRLVIS
Sbjct: 329 DLLKLERLQEELAERCGGQPTFAQWAAAAGVDQKTLRSRLNYGVHCKDKMIKSNIRLVIS 388
Query: 952 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRT 773
IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRT
Sbjct: 389 IAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRT 448
Query: 772 IRLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQ 593
IRLPFHMVEATYRVKEARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQ
Sbjct: 449 IRLPFHMVEATYRVKEARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQ 508
Query: 592 KIGINQDLKPS--------DVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKW 437
KIGINQ+LKPS +VIADPEAET+ED+LIKQFM++DL KVLDSL+ RE+QV++W
Sbjct: 509 KIGINQNLKPSVCPVSSLAEVIADPEAETAEDMLIKQFMRKDLEKVLDSLSQRERQVIRW 568
Query: 436 RFGLEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
RFG+EDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++
Sbjct: 569 RFGMEDGRMKTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLL 619
>ref|XP_010661180.1| PREDICTED: RNA polymerase sigma factor sigB [Vitis vinifera]
gi|296090195|emb|CBI40014.3| unnamed protein product
[Vitis vinifera]
Length = 575
Score = 602 bits (1553), Expect = 0.0
Identities = 321/522 (61%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL++H S+A ++P Y+G GPP+E N A +ETLLTS
Sbjct: 53 VLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAAAA 112
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A +V + S K ++ L DTS + Q ++
Sbjct: 113 AEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGILG 172
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ AE G+ + N D +SDD+EP+ EELE LEA+ +KSI VRS RQ
Sbjct: 173 DSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARA 232
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
A + +Q+VDY+DP +EE LSEGIQ
Sbjct: 233 AEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQD 292
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE+LQE+L ER G PTF+QWAAAAGVD +TLR++ NYGI CKDKMIKSNIRLVISI
Sbjct: 293 LLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISI 352
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMN+QDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 353 AKNYQGAGMNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 412
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL+AV+LTPKAPRSLDQK
Sbjct: 413 RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQK 472
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS+VIADP+AET+E+LLIKQFM++DL KVL+SLNPREKQV++WR+GLEDGR
Sbjct: 473 IGINQNLKPSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRT 532
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTKHLQQY++
Sbjct: 533 KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLV 574
>gb|KDO49416.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 525
Score = 599 bits (1544), Expect = 0.0
Identities = 329/522 (63%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL+AH ++A N+ Y GA GP +E NLG + ETL TS
Sbjct: 4 VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+MV+HH S KP S I DT+ +QL ++
Sbjct: 63 AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISSSADTNTSMWAQLTERERASIIG 121
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ + E E PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT
Sbjct: 122 DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 181
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ VQ+VDY+DP +EE LS GIQ
Sbjct: 182 AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 241
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 242 LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 301
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 302 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 361
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+L+PKAPRSLDQK
Sbjct: 362 RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQK 421
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 422 IGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 481
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 482 KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523
>ref|XP_010278441.1| PREDICTED: RNA polymerase sigma factor sigB-like [Nelumbo nucifera]
Length = 572
Score = 600 bits (1548), Expect = 0.0
Identities = 328/522 (62%), Positives = 380/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
++D EKL PSL+AH IS+ ++PL Y+GA PP++ A E L+T
Sbjct: 59 VVDDEKLRMPSLEAHLISVPADRPLTYIGAIDPPTKAKFEATLATEPLITGDEALIAAAA 118
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+MVS + S+K D I E+DT E +QL + + +V
Sbjct: 119 VEAVALAKAAVEIAKDAALMVSTNPSSKSDKWPPDIPSELDTYWHETAQLNEIEQVDMVH 178
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
AE S P +SD ++P+ EEL+ L+ QL+KSIAVRS RQT
Sbjct: 179 HSLGAE---------SRPKEDSDYLDPTDEELKLLQMQLSKSIAVRSGRQTERRARRARA 229
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ +QDVDY+DP +EE SEGIQ
Sbjct: 230 AEKVAANVVAVKSGSSSRKKRSALQDVDYSDPLRYLRGTTSTSRLLTATEELEFSEGIQD 289
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE+L EEL ER GG PTF+QWAAAAG+D +TLRK++NYGILCKDKMIKSNIRLVISI
Sbjct: 290 LLKLEKLYEELAERYGGQPTFAQWAAAAGIDQKTLRKRLNYGILCKDKMIKSNIRLVISI 349
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 350 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 409
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRV+EARKQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAPRSLDQK
Sbjct: 410 RLPFHMVEATYRVREARKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPRSLDQK 469
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS+VIADP+AET+E+LL+K+FMKQDL KVLDSLNPREKQV++WRFGLEDGRM
Sbjct: 470 IGINQNLKPSEVIADPDAETTEELLMKKFMKQDLEKVLDSLNPREKQVIRWRFGLEDGRM 529
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTK+LQQY++
Sbjct: 530 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKNLQQYLI 571
>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Citrus
sinensis]
Length = 525
Score = 598 bits (1542), Expect = 0.0
Identities = 329/522 (63%), Positives = 376/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL+AH ++A N+ Y GA GP +E NLG + ETL TS
Sbjct: 4 VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 62
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+MV+HH S KP S I DT+ +QL ++
Sbjct: 63 AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTNTSMWAQLTERERASIIG 121
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ + E E PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT
Sbjct: 122 DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 181
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ VQ+VDY+DP +EE LS GIQ
Sbjct: 182 AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 241
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 242 LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 301
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 302 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 361
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+LTPKAPRSLDQK
Sbjct: 362 RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 421
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
GINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 422 FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 481
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 482 KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 523
>gb|KDO49412.1| hypothetical protein CISIN_1g007404mg [Citrus sinensis]
Length = 605
Score = 599 bits (1544), Expect = 0.0
Identities = 329/522 (63%), Positives = 377/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL+AH ++A N+ Y GA GP +E NLG + ETL TS
Sbjct: 84 VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+MV+HH S KP S I DT+ +QL ++
Sbjct: 143 AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISSSADTNTSMWAQLTERERASIIG 201
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ + E E PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT
Sbjct: 202 DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 261
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ VQ+VDY+DP +EE LS GIQ
Sbjct: 262 AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 321
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 322 LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 381
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 382 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 441
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+L+PKAPRSLDQK
Sbjct: 442 RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLSPKAPRSLDQK 501
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 502 IGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 561
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 562 KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 603
>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Citrus
sinensis]
Length = 605
Score = 598 bits (1542), Expect = 0.0
Identities = 329/522 (63%), Positives = 376/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LD+EKL PSL+AH ++A N+ Y GA GP +E NLG + ETL TS
Sbjct: 84 VLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETL-TSDEAVIAAAS 142
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+MV+HH S KP S I DT+ +QL ++
Sbjct: 143 AEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTNTSMWAQLTERERASIIG 201
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ + E E PL +S D+EP+ EEL+ LE Q+++SIAVRS+RQT
Sbjct: 202 DSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTRA 261
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ VQ+VDY+DP +EE LS GIQ
Sbjct: 262 AEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQD 321
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE L+E L+ERCGG PTF+QWAAAAGVD R LR+++NYGILCKDKMI SNIRLVISI
Sbjct: 322 LLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVISI 381
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 382 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 441
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR P++EEVAEATGLSMKRL AV+LTPKAPRSLDQK
Sbjct: 442 RLPFHMVEATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLHAVLLTPKAPRSLDQK 501
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
GINQ+LKPS+VIADPEAET+EDLLIK+FMK+DL KVLD+LNPRE+QVV+WRFGLEDGRM
Sbjct: 502 FGINQNLKPSEVIADPEAETAEDLLIKKFMKEDLEKVLDTLNPRERQVVRWRFGLEDGRM 561
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIES AFRKLKNKKRTKHL QY +
Sbjct: 562 KTLQEIGELMGVSRERIRQIESSAFRKLKNKKRTKHLMQYAI 603
>ref|XP_012070322.1| PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
gi|802585247|ref|XP_012070323.1| PREDICTED: RNA
polymerase sigma factor sigB [Jatropha curcas]
gi|643732514|gb|KDP39610.1| hypothetical protein
JCGZ_02630 [Jatropha curcas]
Length = 577
Score = 597 bits (1539), Expect = 0.0
Identities = 323/522 (61%), Positives = 370/522 (70%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
+LDLEKL PS +AHP S+ N P YVG+ GPP E G+ ETL+T
Sbjct: 58 VLDLEKLRLPSFEAHPDSLVANSPWTYVGSIGPPKET-FGSTLATETLITGDDAVIAAAA 116
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A++V S++ +S +P + Q ++
Sbjct: 117 AEAVALARAAAKVAKDAAILVKSFPSSEAESKLE--IPSIADVSSRWPQFTETDRARIIG 174
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
+ AE G E +P P ESD +EP+ EELE L+ QL++ IAVRS+RQT
Sbjct: 175 DSVTAETGSREEHPMQHPTKESDHLEPTHEELELLQKQLSEGIAVRSRRQTERKERRTRA 234
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
AN+ +Q+VDY+DP +EE LSEGIQ
Sbjct: 235 AEKAAANVMSWKSGSTSKKKRGPLQEVDYSDPLRYLRGTTSTSKLLTATEELELSEGIQD 294
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLERL EEL ERCGG PTF QWAAAAGVD +TLR ++NYGI CKD+MIKSNIRLVISI
Sbjct: 295 LLKLERLHEELAERCGGQPTFQQWAAAAGVDQKTLRTRLNYGISCKDRMIKSNIRLVISI 354
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 355 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 414
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRVKEARKQLYSENGR PDDEEVAEATGLSMKRLSAV+LTPKAPRSLDQK
Sbjct: 415 RLPFHMVEATYRVKEARKQLYSENGRYPDDEEVAEATGLSMKRLSAVLLTPKAPRSLDQK 474
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IGIN DLKPS++IADP+AET+EDLL+KQFMKQDL KVLDSL+PRE QV++WRFGLEDGR+
Sbjct: 475 IGINMDLKPSEIIADPDAETAEDLLMKQFMKQDLEKVLDSLSPRENQVIRWRFGLEDGRI 534
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGE+MGVSRERIRQIES AFRKLK KKRTK L+QY++
Sbjct: 535 KTLQEIGEIMGVSRERIRQIESSAFRKLKKKKRTKQLKQYLV 576
>ref|XP_010251515.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Nelumbo
nucifera]
Length = 584
Score = 596 bits (1537), Expect = 0.0
Identities = 318/522 (60%), Positives = 378/522 (72%), Gaps = 2/522 (0%)
Frame = -2
Query: 1843 MLDLEKL--PSLDAHPISIAENKPLAYVGAFGPPSEVNLGANFDKETLLTSXXXXXXXXX 1670
++D+EKL PSL++H IS+A ++PL+Y+GA GPP++ + A E+L+T
Sbjct: 62 LVDVEKLRMPSLESHSISVASDRPLSYIGATGPPTKASFEATLAMESLITGDEALIAAAA 121
Query: 1669 XXXXXXXXXXXXXXXXXAMMVSHHKSTKPDSTTTGILPEVDTSMVEKSQLAHLAERVVVR 1490
A+MV+ S++ ++ + E +EK+QL E +
Sbjct: 122 AEAVALAKEAVEVAKDAALMVNDKSSSESENGPSDFSSESHIFRLEKAQLTETQEVGRID 181
Query: 1489 EPKVAEIGLGEINPASDPLAESDDVEPSAEELEFLEAQLTKSIAVRSKRQTXXXXXXXXX 1310
E E +SD ++ S EE + L+ QL KSIAVRS RQT
Sbjct: 182 HSVGLESRQEEEQSVQFSNKDSDGLDSSDEEFKLLQMQLLKSIAVRSGRQTERQARRARA 241
Query: 1309 XXXXXANIXXXXXXXXXXXXXXXVQDVDYNDPXXXXXXXXXXXXXXXXSEEQVLSEGIQV 1130
N+ +QD+DY+DP +EE LSEGIQ
Sbjct: 242 MEKASTNVLSVKSGHSSRKRRAALQDIDYSDPLRYLRGTTSTSRLLTATEELELSEGIQD 301
Query: 1129 LLKLERLQEELTERCGGPPTFSQWAAAAGVDLRTLRKQINYGILCKDKMIKSNIRLVISI 950
LLKLE+L EEL ERCGG PTF+QWAAAAGVD +TLRK++NYGILCKDKMIKSNIRLVISI
Sbjct: 302 LLKLEKLHEELAERCGGQPTFAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISI 361
Query: 949 AKNYQGAGMNLQDLVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRTI 770
AKNYQGAGMNLQDLVQEGCRGLV+GAEKFDA+KGFKFSTYAHWWIKQAVRKSLSDQSRTI
Sbjct: 362 AKNYQGAGMNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTI 421
Query: 769 RLPFHMVEATYRVKEARKQLYSENGRLPDDEEVAEATGLSMKRLSAVMLTPKAPRSLDQK 590
RLPFHMVEATYRV+EA+KQLYSENGR PD+EEVAEATGLSMKRL+AV+LTPKAP SLDQK
Sbjct: 422 RLPFHMVEATYRVREAKKQLYSENGRHPDNEEVAEATGLSMKRLTAVLLTPKAPISLDQK 481
Query: 589 IGINQDLKPSDVIADPEAETSEDLLIKQFMKQDLAKVLDSLNPREKQVVKWRFGLEDGRM 410
IG+NQD+KPS++IADP+AET+E+LLIKQFMKQDL KVLDSLNPREKQV++WRFG+EDGRM
Sbjct: 482 IGMNQDMKPSEIIADPDAETAEELLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRM 541
Query: 409 KTLQEIGELMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM 284
KTLQEIGELMGVSRERIRQIESCAFRKLKNK+RTK+LQQYV+
Sbjct: 542 KTLQEIGELMGVSRERIRQIESCAFRKLKNKRRTKNLQQYVI 583