BLASTX nr result

ID: Rehmannia27_contig00001295 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00001295
         (373 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011082908.1| PREDICTED: pentatricopeptide repeat-containi...    73   9e-13
ref|XP_012846716.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-09

>ref|XP_011082908.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Sesamum indicum]
          Length = 520

 Score = 73.2 bits (178), Expect = 9e-13
 Identities = 32/34 (94%), Positives = 33/34 (97%)
 Frame = -2

Query: 102 MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHS 1
           MPPCF SFNPPSTSISKFISDQPFLSMLETNCH+
Sbjct: 1   MPPCFCSFNPPSTSISKFISDQPFLSMLETNCHT 34


>ref|XP_012846716.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Erythranthe guttata]
          Length = 611

 Score = 64.3 bits (155), Expect = 1e-09
 Identities = 32/44 (72%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
 Frame = -2

Query: 123 KVNIYPR---MPPCFLSFNPPSTSISKFISDQPFLSMLETNCHS 1
           KV  YP     PPCF S NP STSISKFISDQPFLS+LETNCH+
Sbjct: 80  KVGGYPIPSIKPPCFCSSNPASTSISKFISDQPFLSLLETNCHT 123


Top