BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00001200
         (5044 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V sub...  2494   0.0  
ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V sub...  2271   0.0  
ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V sub...  2267   0.0  
gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlise...  1956   0.0  
ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V sub...  1892   0.0  
ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1877   0.0  
ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1874   0.0  
emb|CDP18669.1| unnamed protein product [Coffea canephora]           1832   0.0  
ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...  1780   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...  1770   0.0  
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...  1740   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...  1740   0.0  
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...  1738   0.0  
ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V sub...  1732   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...  1731   0.0  
ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V sub...  1724   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...  1724   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...  1724   0.0  
ref|XP_015570848.1| PREDICTED: DNA-directed RNA polymerase V sub...  1716   0.0  
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r...  1707   0.0  

>ref|XP_011089162.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
          Length = 2096

 Score = 2494 bits (6464), Expect = 0.0
 Identities = 1290/1714 (75%), Positives = 1408/1714 (82%), Gaps = 80/1714 (4%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            MEDSS PTTFEAKIKGIRFGLATRQEICKAS+SDCPISHASQLSNPFLGLPLETGKCESC
Sbjct: 1    MEDSSAPTTFEAKIKGIRFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXFERVMS 502
            GTGEAGQCEGHFGYIELPTPIYHPDHV E                           R   
Sbjct: 61   GTGEAGQCEGHFGYIELPTPIYHPDHVGELKRMLSLLCLKCLKFK----------NRKFQ 110

Query: 503  CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPSE 682
            C EE SQISINEAKT+DGAYYLELKVPSRSRL+EGFW FLEKYGFRYG+MY SRPLLPSE
Sbjct: 111  CCEETSQISINEAKTSDGAYYLELKVPSRSRLQEGFWYFLEKYGFRYGDMY-SRPLLPSE 169

Query: 683  VMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITXX 862
            VMAIL+K+PQET++KLSAKGYFPQDGYI+QHLPVPPNCLSVPD+SDGISTMSTDYSIT  
Sbjct: 170  VMAILRKIPQETKRKLSAKGYFPQDGYILQHLPVPPNCLSVPDISDGISTMSTDYSITLL 229

Query: 863  XXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKEI 1042
                       NSRSG PNFESHEIEAN+LQAAVA YLQFRGTGKASRDVDTRFGVNKEI
Sbjct: 230  KKVLRQVEIIKNSRSGKPNFESHEIEANDLQAAVAQYLQFRGTGKASRDVDTRFGVNKEI 289

Query: 1043 NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN 1222
            NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN
Sbjct: 290  NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN 349

Query: 1223 MEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTTH 1402
            M+FLQKLVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPTTH
Sbjct: 350  MQFLQKLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTH 409

Query: 1403 KHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL 1582
            KHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL
Sbjct: 410  KHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL 469

Query: 1583 LSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLWT 1762
            LSSHTGNFNLQLATDSLLSLKIL R YFL+RAAAQQLAMFVP++L +P+V+KS+SGPLWT
Sbjct: 470  LSSHTGNFNLQLATDSLLSLKILLRNYFLNRAAAQQLAMFVPSVLPKPAVVKSDSGPLWT 529

Query: 1763 ASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLRF 1942
            ASQILQ +LP SFDCSGERH IS SE+LSL+FNRDVMASI+NDIVTSLFFLKGPKEVLRF
Sbjct: 530  ASQILQTTLPSSFDCSGERHIISKSEILSLEFNRDVMASILNDIVTSLFFLKGPKEVLRF 589

Query: 1943 FNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQL 2122
            FNSIQ LLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLR+SYSESI LQL
Sbjct: 590  FNSIQPLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRASYSESIDLQL 649

Query: 2123 DSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILVK 2302
            D+YLRS+KIPVTNF+LKSS IGHLIDSKSESALSKVVQQIGFLG+Q+SD+GKFYS +LVK
Sbjct: 650  DTYLRSMKIPVTNFVLKSSAIGHLIDSKSESALSKVVQQIGFLGVQISDKGKFYSEMLVK 709

Query: 2303 DMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPGT 2482
            DMSS+FQK+YPSCDDYP EEFGLVGR LFRGLDPYQEMVHSISSREVIVRSTRGLTEPGT
Sbjct: 710  DMSSLFQKKYPSCDDYPTEEFGLVGRPLFRGLDPYQEMVHSISSREVIVRSTRGLTEPGT 769

Query: 2483 LFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMSN 2662
            LFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV+SANIASEFCAGDPVGVLAATAMSN
Sbjct: 770  LFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYGVSSANIASEFCAGDPVGVLAATAMSN 829

Query: 2663 PAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAALI 2842
            PAYKAVLD        WEMMKEILLCGV+FKND SDRRVILYLN+CDCGRKHCQE AALI
Sbjct: 830  PAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDISDRRVILYLNSCDCGRKHCQETAALI 889

Query: 2843 VKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNISMHDILEK 3016
            VKN LKKVSLKDTAIEFLIEYRSQM H+  E +PG VGHIHLNKT LIQSNISMH ILE+
Sbjct: 890  VKNQLKKVSLKDTAIEFLIEYRSQMAHDSTEIDPGLVGHIHLNKTQLIQSNISMHGILEQ 949

Query: 3017 CQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLEKA 3196
            CQ+ I+  QKKKKV NLFK IDL               WTD+PCIQF W +A+ D LE+A
Sbjct: 950  CQETISRHQKKKKVGNLFKKIDLSFSDCCSFCQSSKSKWTDLPCIQFSW-QARGDLLERA 1008

Query: 3197 SHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKEA 3376
            S +L DTVCPVL QTIIKGDPRVSTANI+WISPD A+WIRSP K PKGELALDIILEKEA
Sbjct: 1009 SDILADTVCPVLLQTIIKGDPRVSTANIIWISPDTATWIRSPCKSPKGELALDIILEKEA 1068

Query: 3377 VKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMVT 3556
            V+KSGDAWRV+MD CLP+IHL+DT+RSIPYAIKQV ELLGISCAFEQAVQRLSTSVTMVT
Sbjct: 1069 VRKSGDAWRVVMDSCLPVIHLIDTRRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTMVT 1128

Query: 3557 KGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAEK 3736
            KGVLKDHLLLL NSMTC+GT IGFN GGIK+LS+SL VQVPFMNATLFTPRKCFERAAEK
Sbjct: 1129 KGVLKDHLLLLGNSMTCAGTLIGFNAGGIKALSKSLSVQVPFMNATLFTPRKCFERAAEK 1188

Query: 3737 CHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKPE 3916
            CHVDNLSSIV SCAWGKHV+VGTGSPFEILW+T KAEL P+KE+D YNFLH+VNS SKPE
Sbjct: 1189 CHVDNLSSIVGSCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYNFLHLVNSSSKPE 1248

Query: 3917 DMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDAN 4096
            DM TSCLGAEI+DLDQE+DFME+D SPVR+ GL+K TFEDG+E+ LNGDD DG SK+DA 
Sbjct: 1249 DMATSCLGAEIEDLDQEDDFMEYDPSPVRDPGLDKPTFEDGIEYRLNGDDNDGLSKEDAK 1308

Query: 4097 EPD------------------------SWGKKVNSEENDWMKIGEQSTYAEE-NQDNSAW 4201
            EP+                        +W K VN+EENDW K  EQST+ ++ N + + W
Sbjct: 1309 EPEGSWSSWTKKVDFEENDWTKKAGQSTWEKNVNTEENDWTKKPEQSTWGKKVNSEENDW 1368

Query: 4202 GKKVDSDGGGWAKKPEQS-WGKKAE-------ETQDNSAWGKKVDSDGGGWAKKPEQSSW 4357
             KKV+S+   W KKPEQS WGKK         E  + S WGKKV+S+   W  KPE+S+W
Sbjct: 1369 NKKVNSEENDWNKKPEQSTWGKKVNSEENDWTEKPEQSTWGKKVNSEENDWTNKPEESTW 1428

Query: 4358 GKK-----------------AEETQDNSAWGKKVDSD-GGGWAKKPEQSSWGKKAEETQS 4483
            GK+                 AEE Q+ SAWGKKVDSD G GWAKK E++ W    + + S
Sbjct: 1429 GKQVASEENDWKKMGEQSAWAEEAQNGSAWGKKVDSDVGRGWAKKDEENKW----DRSGS 1484

Query: 4484 SSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSASG 4663
            S   GQ +  ++ D+ +  WG  ST KT+N S+WGRDT++ E + SA SQEDGSWSSAS 
Sbjct: 1485 SERRGQSS--HSRDSNKGGWGKASTPKTNNQSSWGRDTTQAEYV-SAESQEDGSWSSASV 1541

Query: 4664 AQND-----SSKAAGWS-LGSNVDNPDVSGSKENLWEAKQADQATQS--SNVWGSSSDWG 4819
            A+ +     SS+ AGW+ LGS   + +V    ++ W AK A+QAT S  SN WGSS D G
Sbjct: 1542 ARRETALDVSSEPAGWNKLGSGTSSLEV---LDDPWGAKVANQATHSKPSNAWGSSKDVG 1598

Query: 4820 KFDSQSPTGEKKMS---QWGSSQKQSLGSNVD----SPDVS----------GSKENLWEA 4948
            KFDS+  T +KK S    W SSQKQ   S VD    SP V+            K+  WEA
Sbjct: 1599 KFDSEPATEQKKESPSNNWSSSQKQLNDSTVDKVWGSPHVNTPSEKDMQSQWGKKGSWEA 1658

Query: 4949 KQADQATQS--SNIWGSSSEWGKFDSQSPTGEKK 5044
            K ADQA  S  SN WG+S +WGK  SQSPTG+KK
Sbjct: 1659 KVADQAIHSKPSNTWGASDDWGKLGSQSPTGKKK 1692


>ref|XP_012836427.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Erythranthe guttata]
          Length = 2102

 Score = 2271 bits (5884), Expect = 0.0
 Identities = 1194/1731 (68%), Positives = 1330/1731 (76%), Gaps = 109/1731 (6%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            M++SSL  TFEAKI+GI+FGLATRQEICKAS+SDCPISHASQLSNPFLGLPLETGKCESC
Sbjct: 1    MDESSLLATFEAKIEGIKFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXFERVMS 502
            GTGE GQCEGHFGYIELPTPIYHPDHV E                          ERV+S
Sbjct: 61   GTGEPGQCEGHFGYIELPTPIYHPDHVDELKRMLTLLCLKCLKFKNRKVKNVGVIERVLS 120

Query: 503  -CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 679
             C EE SQ+SIN+AKTTDGAY+LELKVP+R R E+G W+FLEKYGFRYG+ Y SRPLLPS
Sbjct: 121  TCCEETSQMSINQAKTTDGAYFLELKVPTRLRHEDGLWHFLEKYGFRYGDGY-SRPLLPS 179

Query: 680  EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 859
            EVMAIL+K+PQ+TRKKLSAKGYFPQDGYI+QHLPVPPNCLSVPDVSDGISTMSTDYSI+ 
Sbjct: 180  EVMAILRKLPQDTRKKLSAKGYFPQDGYILQHLPVPPNCLSVPDVSDGISTMSTDYSISL 239

Query: 860  XXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 1039
                        NSRSGMPNFES EIEANELQAAVA YLQFRGTGKASRDVD+RFGVNKE
Sbjct: 240  LKKVLRQVEIIKNSRSGMPNFESQEIEANELQAAVALYLQFRGTGKASRDVDSRFGVNKE 299

Query: 1040 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 1219
            IN SSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH
Sbjct: 300  INVSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 359

Query: 1220 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 1399
            N+ FLQKLVD+KLCLTYRDG S YSLREGSKGHT LR GQVVHRRIMDGD VFINRPPTT
Sbjct: 360  NILFLQKLVDEKLCLTYRDGLSQYSLREGSKGHTSLRPGQVVHRRIMDGDTVFINRPPTT 419

Query: 1400 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 1579
            HKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEV+ELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVLELFSVEKQ 479

Query: 1580 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLW 1759
            LLSSHTG FNLQLA DSLLSLK+LFRKYFLSRAAAQQLAMF PN+LSRPSV KS SGPLW
Sbjct: 480  LLSSHTGAFNLQLANDSLLSLKVLFRKYFLSRAAAQQLAMFAPNVLSRPSVSKSASGPLW 539

Query: 1760 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 1939
            TA QIL+++LPPSFD SGERH IS SEVLS+DF+ D M  IVNDIVTSLFFLKGP+EV+R
Sbjct: 540  TAPQILELTLPPSFDSSGERHVISKSEVLSVDFSWDGMTPIVNDIVTSLFFLKGPEEVIR 599

Query: 1940 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2119
            FFNSIQ LLME+LY+EGFSVSLR+FFLP DVLESIQEN+QKISPLL+HLR+SYSESIALQ
Sbjct: 600  FFNSIQPLLMENLYTEGFSVSLREFFLPLDVLESIQENLQKISPLLFHLRASYSESIALQ 659

Query: 2120 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 2299
            +D+YLR+VKIPVTNF+ KSS +G LIDSKSESALSKVVQQIGFLG+QLSD+GKFY+  LV
Sbjct: 660  IDNYLRNVKIPVTNFV-KSSAVGRLIDSKSESALSKVVQQIGFLGIQLSDKGKFYTETLV 718

Query: 2300 KDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPG 2479
            +DMSS+FQK+YPSCD YPAEEF LV R LFRGL+PYQEMVHSI+SREVIVRSTRGLTEPG
Sbjct: 719  QDMSSLFQKKYPSCDGYPAEEFSLVSRPLFRGLNPYQEMVHSIASREVIVRSTRGLTEPG 778

Query: 2480 TLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMS 2659
            TLFKNLMAILRDVVIC+DGTVRN CSNSIIQFEYGVN+ANIASEFCAGDPVGVLAATAMS
Sbjct: 779  TLFKNLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNTANIASEFCAGDPVGVLAATAMS 838

Query: 2660 NPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAAL 2839
            NPAYKAVLD        WEMMKEILLCGV+FKND +DRRVILYL++CDCGRKHCQE+AAL
Sbjct: 839  NPAYKAVLDSSSSSNSSWEMMKEILLCGVSFKNDITDRRVILYLSHCDCGRKHCQESAAL 898

Query: 2840 IVKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNISMHDILE 3013
            +VKN LKKVSLKDTA+EFLIEYRSQ +HE  E + G VGHIHLNKT L+QSNISM D+LE
Sbjct: 899  VVKNQLKKVSLKDTAMEFLIEYRSQSVHESHETSHGLVGHIHLNKTQLVQSNISMDDVLE 958

Query: 3014 KCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLEK 3193
            KC++ I +Q KKKKV NLFK ++L                TDVPCIQF W+ A  + LE+
Sbjct: 959  KCRETIILQHKKKKVGNLFKKVELSVSDCCSFCQSSKSKLTDVPCIQFFWQGAPDNLLER 1018

Query: 3194 ASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKE 3373
            AS+ L DTVCPVL QTIIKGDPR+STAN+VW+SPD  +WIRSPSK P GELALDI+LEKE
Sbjct: 1019 ASYFLADTVCPVLLQTIIKGDPRISTANVVWLSPDTPTWIRSPSKSPIGELALDIVLEKE 1078

Query: 3374 AVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMV 3553
            AV+KSGDAWRV+MD CLP++HL+DTQRSIPY IKQV ELLGISCAFEQAVQRLSTSVTMV
Sbjct: 1079 AVRKSGDAWRVVMDSCLPVMHLIDTQRSIPYGIKQVQELLGISCAFEQAVQRLSTSVTMV 1138

Query: 3554 TKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAE 3733
            TKGVLKDHLLLL NSMTC+GT IGFN+GGIK+LSR LGVQVPFMNATLFTPRKCFE+AAE
Sbjct: 1139 TKGVLKDHLLLLGNSMTCAGTLIGFNSGGIKALSRLLGVQVPFMNATLFTPRKCFEKAAE 1198

Query: 3734 KCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKP 3913
            KC+VDNLSSIVASCAWGKHV+VGTGSPFEILW+T KAEL P+KE+D Y+FLHMVNS SK 
Sbjct: 1199 KCYVDNLSSIVASCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYDFLHMVNS-SKL 1257

Query: 3914 EDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDA 4093
            ED GTSCLGA+I+DL QE D+M+ DLSPVRE G EK TFE  VEFGLNG   DGFSK+  
Sbjct: 1258 EDAGTSCLGADIEDLGQE-DYMDLDLSPVREPGSEKPTFECEVEFGLNG---DGFSKEGG 1313

Query: 4094 NEPD-----------------------SWGKKVNSEENDWMKIGEQSTYAEENQDNSAWG 4204
             E +                       +WGKKV+ E +DW+  G++S   EEN  +S+WG
Sbjct: 1314 KESEDSWSSWGKKVDTEDDWTKKAELTTWGKKVDREADDWILKGQKSKTDEEN--SSSWG 1371

Query: 4205 KKVDSDGGGWAKKPEQSWGKKA--------------------EETQDNSAWGKKVDSDGG 4324
            KKV+SD GGW +KPEQS G                       E+ Q  SAWGKK +SD G
Sbjct: 1372 KKVESDAGGWGRKPEQSTGGSTGQTRSIDNDWTKAGQQSTFDEDAQTGSAWGKKKESDAG 1431

Query: 4325 GWAKKPEQSS--WGKKAEETQDNSAWGKKVDSDGGGWAKKPEQS---------------S 4453
            GW K  E  +  WGKK E   D   WGKKVDSD GGW KKPEQS               +
Sbjct: 1432 GWGKNVESDAGGWGKKVE--SDAGGWGKKVDSDAGGWGKKPEQSPRGNTARSVDNVNSPA 1489

Query: 4454 WGKKA-----------------EETQSSSAWGQKTLVNAGD----NKQNSWGNVST---- 4558
            WGKK                  E  Q+SSAWG+K   + GD    ++Q++WGNV      
Sbjct: 1490 WGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAGSDGGDWAKKDEQSTWGNVKKAGFD 1549

Query: 4559 ----SKTDNNSTWGRDTSKIEDISS-ARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNP 4723
                +K D  STWG       D    A+  E  +W +A  A +D    A     S   N 
Sbjct: 1550 SGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEPSTWGNAKKAGSDGGDWAKKDEQSTWGNV 1609

Query: 4724 DVSGSKENLWEAKQADQATQSS--NVWGSSSDWGKFDSQSPTGEKKMS-----QWGSSQK 4882
              +GS    W AK+ +Q+T  +         DW K D QS  G  K +      W    +
Sbjct: 1610 KKAGSDGGDW-AKKDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDWAKKDE 1668

Query: 4883 QSLGSNVDSPDVSGSK---------ENLWEAKQADQATQSSNIWGSSSEWG 5008
            QS   NV +  +             EN+   K  +    SS   G  S WG
Sbjct: 1669 QSTWGNVKASQIQNKSTWGRDAAPTENVSSPKSQEDGLWSSAQKGEQSTWG 1719



 Score =  229 bits (585), Expect = 6e-57
 Identities = 154/398 (38%), Positives = 195/398 (48%), Gaps = 87/398 (21%)
 Frame = +2

Query: 4079 SKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGWAKKPEQS- 4255
            S  + N P +WGKKV SE N+W K GE+ST  E  Q++SAWGKK  SDGG WAKK EQS 
Sbjct: 1481 SVDNVNSP-AWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAGSDGGDWAKKDEQST 1539

Query: 4256 -------------WGKKAEET------------------QDNSAWG--KKVDSDGGGWAK 4336
                         W KK E++                   + S WG  KK  SDGG WAK
Sbjct: 1540 WGNVKKAGFDSGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEPSTWGNAKKAGSDGGDWAK 1599

Query: 4337 KPEQSSWG-------------KKAEET------------------QDNSAWG--KKVDSD 4417
            K EQS+WG             KK E++                   + S WG  KK  SD
Sbjct: 1600 KDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSD 1659

Query: 4418 GGGWAKKPEQSSWGK-KAEETQSSSAWGQKTLV----------------NAGDNKQNSWG 4546
            GG WAKK EQS+WG  KA + Q+ S WG+                    +A   +Q++WG
Sbjct: 1660 GGDWAKKDEQSTWGNVKASQIQNKSTWGRDAAPTENVSSPKSQEDGLWSSAQKGEQSTWG 1719

Query: 4547 NVSTSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPD 4726
            +V TS+T N STWG DT+ IE++ S +SQEDG WSSAS AQ +         GS  +NP 
Sbjct: 1720 HVKTSQTQNKSTWGGDTAPIENVPSPKSQEDGLWSSASAAQKEQD-------GSKDNNP- 1771

Query: 4727 VSGSKENLWEAKQADQA-TQSSNVWGSSSDWGKFDSQSPTGE--KKMSQWGSSQKQSLGS 4897
                    W+ K A+QA ++  + WGSSSDW K DSQ+PTG+  K  S W SSQK     
Sbjct: 1772 --------WQTKVAEQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESPWSSSQKLL--- 1820

Query: 4898 NVDSPDVSGSKENLWEAKQADQATQSSNIWGSSSEWGK 5011
              DS D  G     W + + D A  +        +WG+
Sbjct: 1821 -NDSTDSQG-----WGSSKVDTANDND----EQPQWGR 1848


>ref|XP_012836426.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Erythranthe guttata] gi|604334092|gb|EYU38281.1|
            hypothetical protein MIMGU_mgv1a000048mg [Erythranthe
            guttata]
          Length = 2113

 Score = 2267 bits (5874), Expect = 0.0
 Identities = 1195/1744 (68%), Positives = 1331/1744 (76%), Gaps = 122/1744 (6%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            M++SSL  TFEAKI+GI+FGLATRQEICKAS+SDCPISHASQLSNPFLGLPLETGKCESC
Sbjct: 1    MDESSLLATFEAKIEGIKFGLATRQEICKASISDCPISHASQLSNPFLGLPLETGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXFERVMS 502
            GTGE GQCEGHFGYIELPTPIYHPDHV E                          ERV+S
Sbjct: 61   GTGEPGQCEGHFGYIELPTPIYHPDHVDELKRMLTLLCLKCLKFKNRKVKNVGVIERVLS 120

Query: 503  -CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 679
             C EE SQ+SIN+AKTTDGAY+LELKVP+R R E+G W+FLEKYGFRYG+ Y SRPLLPS
Sbjct: 121  TCCEETSQMSINQAKTTDGAYFLELKVPTRLRHEDGLWHFLEKYGFRYGDGY-SRPLLPS 179

Query: 680  EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 859
            EVMAIL+K+PQ+TRKKLSAKGYFPQDGYI+QHLPVPPNCLSVPDVSDGISTMSTDYSI+ 
Sbjct: 180  EVMAILRKLPQDTRKKLSAKGYFPQDGYILQHLPVPPNCLSVPDVSDGISTMSTDYSISL 239

Query: 860  XXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 1039
                        NSRSGMPNFES EIEANELQAAVA YLQFRGTGKASRDVD+RFGVNKE
Sbjct: 240  LKKVLRQVEIIKNSRSGMPNFESQEIEANELQAAVALYLQFRGTGKASRDVDSRFGVNKE 299

Query: 1040 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 1219
            IN SSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH
Sbjct: 300  INVSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 359

Query: 1220 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 1399
            N+ FLQKLVD+KLCLTYRDG S YSLREGSKGHT LR GQVVHRRIMDGD VFINRPPTT
Sbjct: 360  NILFLQKLVDEKLCLTYRDGLSQYSLREGSKGHTSLRPGQVVHRRIMDGDTVFINRPPTT 419

Query: 1400 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 1579
            HKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEV+ELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVLELFSVEKQ 479

Query: 1580 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLW 1759
            LLSSHTG FNLQLA DSLLSLK+LFRKYFLSRAAAQQLAMF PN+LSRPSV KS SGPLW
Sbjct: 480  LLSSHTGAFNLQLANDSLLSLKVLFRKYFLSRAAAQQLAMFAPNVLSRPSVSKSASGPLW 539

Query: 1760 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 1939
            TA QIL+++LPPSFD SGERH IS SEVLS+DF+ D M  IVNDIVTSLFFLKGP+EV+R
Sbjct: 540  TAPQILELTLPPSFDSSGERHVISKSEVLSVDFSWDGMTPIVNDIVTSLFFLKGPEEVIR 599

Query: 1940 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2119
            FFNSIQ LLME+LY+EGFSVSLR+FFLP DVLESIQEN+QKISPLL+HLR+SYSESIALQ
Sbjct: 600  FFNSIQPLLMENLYTEGFSVSLREFFLPLDVLESIQENLQKISPLLFHLRASYSESIALQ 659

Query: 2120 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 2299
            +D+YLR+VKIPVTNF+ KSS +G LIDSKSESALSKVVQQIGFLG+QLSD+GKFY+  LV
Sbjct: 660  IDNYLRNVKIPVTNFV-KSSAVGRLIDSKSESALSKVVQQIGFLGIQLSDKGKFYTETLV 718

Query: 2300 KDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPG 2479
            +DMSS+FQK+YPSCD YPAEEF LV R LFRGL+PYQEMVHSI+SREVIVRSTRGLTEPG
Sbjct: 719  QDMSSLFQKKYPSCDGYPAEEFSLVSRPLFRGLNPYQEMVHSIASREVIVRSTRGLTEPG 778

Query: 2480 TLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMS 2659
            TLFKNLMAILRDVVIC+DGTVRN CSNSIIQFEYGVN+ANIASEFCAGDPVGVLAATAMS
Sbjct: 779  TLFKNLMAILRDVVICHDGTVRNMCSNSIIQFEYGVNTANIASEFCAGDPVGVLAATAMS 838

Query: 2660 NPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAAL 2839
            NPAYKAVLD        WEMMKEILLCGV+FKND +DRRVILYL++CDCGRKHCQE+AAL
Sbjct: 839  NPAYKAVLDSSSSSNSSWEMMKEILLCGVSFKNDITDRRVILYLSHCDCGRKHCQESAAL 898

Query: 2840 IVKNHLKKVSLKDTAIEFLIEYRSQMMHE--EGNPGPVGHIHLNKTLLIQSNISMHDILE 3013
            +VKN LKKVSLKDTA+EFLIEYRSQ +HE  E + G VGHIHLNKT L+QSNISM D+LE
Sbjct: 899  VVKNQLKKVSLKDTAMEFLIEYRSQSVHESHETSHGLVGHIHLNKTQLVQSNISMDDVLE 958

Query: 3014 KCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLEK 3193
            KC++ I +Q KKKKV NLFK ++L                TDVPCIQF W+ A  + LE+
Sbjct: 959  KCRETIILQHKKKKVGNLFKKVELSVSDCCSFCQSSKSKLTDVPCIQFFWQGAPDNLLER 1018

Query: 3194 ASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKE 3373
            AS+ L DTVCPVL QTIIKGDPR+STAN+VW+SPD  +WIRSPSK P GELALDI+LEKE
Sbjct: 1019 ASYFLADTVCPVLLQTIIKGDPRISTANVVWLSPDTPTWIRSPSKSPIGELALDIVLEKE 1078

Query: 3374 AVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMV 3553
            AV+KSGDAWRV+MD CLP++HL+DTQRSIPY IKQV ELLGISCAFEQAVQRLSTSVTMV
Sbjct: 1079 AVRKSGDAWRVVMDSCLPVMHLIDTQRSIPYGIKQVQELLGISCAFEQAVQRLSTSVTMV 1138

Query: 3554 TKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAE 3733
            TKGVLKDHLLLL NSMTC+GT IGFN+GGIK+LSR LGVQVPFMNATLFTPRKCFE+AAE
Sbjct: 1139 TKGVLKDHLLLLGNSMTCAGTLIGFNSGGIKALSRLLGVQVPFMNATLFTPRKCFEKAAE 1198

Query: 3734 KCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKP 3913
            KC+VDNLSSIVASCAWGKHV+VGTGSPFEILW+T KAEL P+KE+D Y+FLHMVNS SK 
Sbjct: 1199 KCYVDNLSSIVASCAWGKHVSVGTGSPFEILWDTRKAELSPDKEIDVYDFLHMVNS-SKL 1257

Query: 3914 EDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDA 4093
            ED GTSCLGA+I+DL QE D+M+ DLSPVRE G EK TFE  VEFGLNG   DGFSK+  
Sbjct: 1258 EDAGTSCLGADIEDLGQE-DYMDLDLSPVREPGSEKPTFECEVEFGLNG---DGFSKEGG 1313

Query: 4094 NEPD-----------------------SWGKKVNSEENDWMKIGEQSTYAEENQDNSAWG 4204
             E +                       +WGKKV+ E +DW+  G++S   EEN  +S+WG
Sbjct: 1314 KESEDSWSSWGKKVDTEDDWTKKAELTTWGKKVDREADDWILKGQKSKTDEEN--SSSWG 1371

Query: 4205 KKVDSDGGGWAKKPEQS---------------------------------WGKKAEETQD 4285
            KKV+SD GGW +KPEQS                                 WGKK E   D
Sbjct: 1372 KKVESDAGGWGRKPEQSTGGSTGQTRSIDNDWTKAGQQSTFDEDAQTGSAWGKKKE--SD 1429

Query: 4286 NSAWGKKVDSDGGGWAKKPEQSS--WGKKAEETQDNSAWGKKVDSDGGGWAKKPEQS--- 4450
               WGK V+SD GGW KK E  +  WGKK E   D   WGK+VDSD GGW KKPEQS   
Sbjct: 1430 AGGWGKNVESDAGGWGKKVESDAGGWGKKVE--SDAGGWGKQVDSDAGGWGKKPEQSPRG 1487

Query: 4451 ------------SWGKKA-----------------EETQSSSAWGQKTLVNAGD----NK 4531
                        +WGKK                  E  Q+SSAWG+K   + GD    ++
Sbjct: 1488 NTARSVDNVNSPAWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAGSDGGDWAKKDE 1547

Query: 4532 QNSWGNVST--------SKTDNNSTWGRDTSKIEDISS-ARSQEDGSWSSASGAQNDSSK 4684
            Q++WGNV          +K D  STWG       D    A+  E  +W +A  A +D   
Sbjct: 1548 QSTWGNVKKAGFDSGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEPSTWGNAKKAGSDGGD 1607

Query: 4685 AAGWSLGSNVDNPDVSGSKENLWEAKQADQATQSS--NVWGSSSDWGKFDSQSPTGEKKM 4858
             A     S   N   +GS    W AK+ +Q+T  +         DW K D QS  G  K 
Sbjct: 1608 WAKKDEQSTWGNVKKAGSDGGDW-AKKDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKK 1666

Query: 4859 S-----QWGSSQKQSLGSNVDSPDVSGSK---------ENLWEAKQADQATQSSNIWGSS 4996
            +      W    +QS   NV +  +             EN+   K  +    SS   G  
Sbjct: 1667 AGSDGGDWAKKDEQSTWGNVKASQIQNKSTWGRDAAPTENVSSPKSQEDGLWSSAQKGEQ 1726

Query: 4997 SEWG 5008
            S WG
Sbjct: 1727 STWG 1730



 Score =  229 bits (585), Expect = 6e-57
 Identities = 154/398 (38%), Positives = 195/398 (48%), Gaps = 87/398 (21%)
 Frame = +2

Query: 4079 SKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGWAKKPEQS- 4255
            S  + N P +WGKKV SE N+W K GE+ST  E  Q++SAWGKK  SDGG WAKK EQS 
Sbjct: 1492 SVDNVNSP-AWGKKVTSEGNEWTKAGEKSTSPEAAQNSSAWGKKAGSDGGDWAKKDEQST 1550

Query: 4256 -------------WGKKAEET------------------QDNSAWG--KKVDSDGGGWAK 4336
                         W KK E++                   + S WG  KK  SDGG WAK
Sbjct: 1551 WGNVKKAGFDSGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEPSTWGNAKKAGSDGGDWAK 1610

Query: 4337 KPEQSSWG-------------KKAEET------------------QDNSAWG--KKVDSD 4417
            K EQS+WG             KK E++                   + S WG  KK  SD
Sbjct: 1611 KDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSDGGDWAKKDEQSTWGNVKKAGSD 1670

Query: 4418 GGGWAKKPEQSSWGK-KAEETQSSSAWGQKTLV----------------NAGDNKQNSWG 4546
            GG WAKK EQS+WG  KA + Q+ S WG+                    +A   +Q++WG
Sbjct: 1671 GGDWAKKDEQSTWGNVKASQIQNKSTWGRDAAPTENVSSPKSQEDGLWSSAQKGEQSTWG 1730

Query: 4547 NVSTSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPD 4726
            +V TS+T N STWG DT+ IE++ S +SQEDG WSSAS AQ +         GS  +NP 
Sbjct: 1731 HVKTSQTQNKSTWGGDTAPIENVPSPKSQEDGLWSSASAAQKEQD-------GSKDNNP- 1782

Query: 4727 VSGSKENLWEAKQADQA-TQSSNVWGSSSDWGKFDSQSPTGE--KKMSQWGSSQKQSLGS 4897
                    W+ K A+QA ++  + WGSSSDW K DSQ+PTG+  K  S W SSQK     
Sbjct: 1783 --------WQTKVAEQANSEPLSTWGSSSDWVKPDSQTPTGDNTKNESPWSSSQKLL--- 1831

Query: 4898 NVDSPDVSGSKENLWEAKQADQATQSSNIWGSSSEWGK 5011
              DS D  G     W + + D A  +        +WG+
Sbjct: 1832 -NDSTDSQG-----WGSSKVDTANDND----EQPQWGR 1859


>gb|EPS67715.1| hypothetical protein M569_07058, partial [Genlisea aurea]
          Length = 1379

 Score = 1956 bits (5066), Expect = 0.0
 Identities = 980/1402 (69%), Positives = 1137/1402 (81%), Gaps = 3/1402 (0%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME+SS+ T  E  I GI FGLAT QEICK+S+SDCPI+HASQLSNPFLGLPL++GKCESC
Sbjct: 1    MENSSVATVPEGMISGISFGLATFQEICKSSISDCPITHASQLSNPFLGLPLDSGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXFERV-M 499
            GTGE GQCEGHFGYIE PTPIYHPDH++E                          ER+ M
Sbjct: 61   GTGEPGQCEGHFGYIEFPTPIYHPDHITELKKMLSLLCLKCLKLKTRKVKNIGAMERMLM 120

Query: 500  SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 679
            SC EE SQI++ E KT+DGA YLELKVP +S+L EG+WNFLEK+GFRYG+ Y SRPLLPS
Sbjct: 121  SCCEETSQITVYETKTSDGASYLELKVPPKSKLREGYWNFLEKHGFRYGHTY-SRPLLPS 179

Query: 680  EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 859
            EVM+ILKK+P+ET+K L ++GYFPQ+GY+++ LPVPPNCL VPD+SDG+STMS DYSIT 
Sbjct: 180  EVMSILKKLPKETKKSLLSRGYFPQEGYVLRFLPVPPNCLCVPDISDGVSTMSKDYSITL 239

Query: 860  XXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 1039
                        NSRSGMPNFESHEIEANELQA+V+ YLQFRGTGKA+RDVD+RFGV+KE
Sbjct: 240  LKKVLRQVEVIKNSRSGMPNFESHEIEANELQASVSQYLQFRGTGKAARDVDSRFGVHKE 299

Query: 1040 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 1219
            IN+SSTKAWLEKMKTLFIRKGSGFSSRSV+TGD FKGVSEIGLP+EIAQKITFEERVN H
Sbjct: 300  INSSSTKAWLEKMKTLFIRKGSGFSSRSVVTGDAFKGVSEIGLPYEIAQKITFEERVNVH 359

Query: 1220 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 1399
            N++FLQKLVD+KLCLTYRDG STYSLREGSKGHTFL+ GQ+VHRRIMDGD+ FINRPPTT
Sbjct: 360  NIDFLQKLVDEKLCLTYRDGSSTYSLREGSKGHTFLKPGQIVHRRIMDGDLAFINRPPTT 419

Query: 1400 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 1579
            HKHSLQALSVY+HD HTVKINPLICGPL+ADFDGDCIHLFYPQSLEA+AEVVELFSVEKQ
Sbjct: 420  HKHSLQALSVYVHDGHTVKINPLICGPLAADFDGDCIHLFYPQSLEARAEVVELFSVEKQ 479

Query: 1580 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGPLW 1759
            LLSSHTGNFNLQL TDSLLSLKILF  +FL + AAQQLAMFV NML+ P+V+KS  GPLW
Sbjct: 480  LLSSHTGNFNLQLTTDSLLSLKILFGNHFLRKKAAQQLAMFV-NMLAGPAVVKSKIGPLW 538

Query: 1760 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 1939
            TASQILQ +LP SF CSGERH I+ SEVL+LD +RD+M ++VND+VTSLFFLKGPK+VL 
Sbjct: 539  TASQILQATLPSSFGCSGERHLIAKSEVLNLDVDRDLMTAVVNDLVTSLFFLKGPKDVLG 598

Query: 1940 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2119
            FFNS+Q LLMESL +EGFSVSL+DFFLPR+VLE I+ENIQKISPLL HLR  YSESIALQ
Sbjct: 599  FFNSVQPLLMESLQAEGFSVSLKDFFLPREVLEGIRENIQKISPLLSHLRDHYSESIALQ 658

Query: 2120 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 2299
            L+SYL SVK PVT FI+ SS IG L DS+SES LSKVVQQIGF G QLS +GKFY+  LV
Sbjct: 659  LESYLSSVKTPVTEFIVNSSAIGFLTDSRSESGLSKVVQQIGFCGTQLSSKGKFYTERLV 718

Query: 2300 KDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEPG 2479
            KD+SS+F+ +YPS DD P E+FGLV + LFRGL+PYQEMVHSISSREVIVRS+RGLTEPG
Sbjct: 719  KDLSSLFRSKYPSSDDCPTEDFGLVCQPLFRGLNPYQEMVHSISSREVIVRSSRGLTEPG 778

Query: 2480 TLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATAMS 2659
            TLFKNLMAILRDVVICYDGTVRN CSNSIIQFEY  NS +I +EFCAGDPVGVLAAT+MS
Sbjct: 779  TLFKNLMAILRDVVICYDGTVRNMCSNSIIQFEYSANSTDIVTEFCAGDPVGVLAATSMS 838

Query: 2660 NPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENAAL 2839
            NPAYKAVLD        W+MMK+ILLC  +FKND SDRRVILYL +C+CGRKHCQE  AL
Sbjct: 839  NPAYKAVLDSSSSSNSAWQMMKDILLCATSFKNDISDRRVILYLTDCECGRKHCQETGAL 898

Query: 2840 IVKNHLKKVSLKDTAIEFLIEYRSQMMH--EEGNPGPVGHIHLNKTLLIQSNISMHDILE 3013
            +V+NHLKKV+LKDTA++FLIEY  Q+    EEG PG VGHIHL++  LI+SN++   I E
Sbjct: 899  VVQNHLKKVTLKDTAVDFLIEYFHQLCQSLEEGYPGLVGHIHLSEMELIRSNVNKDRIFE 958

Query: 3014 KCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLEK 3193
             C + IN+ +KKKKV NLFK I L                T+VPC+QF W  A ID+++K
Sbjct: 959  GCLETINLYEKKKKVGNLFKKIKLSYSDHCTFCASSKSKRTEVPCVQFLWNGA-IDDIDK 1017

Query: 3194 ASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEKE 3373
             SHLL DTVCP L QT+IKGDPRVSTA IVW+SP  A+WIRSPSK   GE+A++++ EKE
Sbjct: 1018 VSHLLSDTVCPALLQTVIKGDPRVSTAEIVWVSPGTATWIRSPSKNLNGEMAIEVVFEKE 1077

Query: 3374 AVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTMV 3553
            A + SGDAWRV MD C+P++HL+DT+RSIPYAIKQV ELLGISCAFEQAVQRLSTSVTMV
Sbjct: 1078 AARHSGDAWRVAMDSCVPVMHLIDTKRSIPYAIKQVQELLGISCAFEQAVQRLSTSVTMV 1137

Query: 3554 TKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAAE 3733
            TKGVLKDH+LLL N+MTC+GT IGFN+GGIK+LS+SL + VPFM ATLFTPRKCFERAAE
Sbjct: 1138 TKGVLKDHILLLGNNMTCAGTLIGFNSGGIKALSQSLDLHVPFMTATLFTPRKCFERAAE 1197

Query: 3734 KCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSKP 3913
            KCHVD L+S+V SCAWGKHV+VGTGSPFEILW+T K +L P+KE+D Y FLH+VN  S P
Sbjct: 1198 KCHVDKLTSVVGSCAWGKHVSVGTGSPFEILWDTRKTDLNPDKELDVYGFLHLVNG-SVP 1256

Query: 3914 EDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQDA 4093
             DMGTSC+G EI+DLDQE   M+F+LSP RE GLEK TF+D  EFG+N +  +G ++   
Sbjct: 1257 LDMGTSCIGTEIEDLDQE--LMDFELSPEREPGLEKPTFDDEHEFGMNSN--EGVTEVKG 1312

Query: 4094 NEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGWAKKPEQSWGKKAE 4273
            +   SWG  V  + NDW              +++ WG  V+S+      K E SWG+  E
Sbjct: 1313 SW-SSWGNVVAPDTNDW----------SNKVESTGWGSAVNSE---LKNKNEDSWGQN-E 1357

Query: 4274 ETQDNSAWGKKVDSDGGGWAKK 4339
            E  D++ WG+K  SD   W +K
Sbjct: 1358 EKPDDTVWGQKEKSDDTVWGQK 1379


>ref|XP_015056787.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Solanum
            pennellii] gi|970001136|ref|XP_015056795.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Solanum
            pennellii]
          Length = 2044

 Score = 1892 bits (4902), Expect = 0.0
 Identities = 1024/1738 (58%), Positives = 1224/1738 (70%), Gaps = 115/1738 (6%)
 Frame = +2

Query: 143  MEDSSLPTTF-EAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCES 319
            ME+ SL +   +  +K I+FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CES
Sbjct: 1    MEEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCES 60

Query: 320  CGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FER 493
            CGT E GQCEGHFGYIELP PIYHPDHVSE                            ER
Sbjct: 61   CGTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKFQVKNAGVLER 120

Query: 494  VMS-CHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRP 667
            ++S C E+VSQ+S+ E KT+DGA YLELKVP  + +L+E  WNFLEKYG+RYG+ Y SRP
Sbjct: 121  MLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQE--WNFLEKYGYRYGDGY-SRP 177

Query: 668  LLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDY 847
            LLPSEV+AIL+++ ++TRKKLSAKGYFPQ+GYI+Q+LPVPPNCLSVPD+SDG + MS+D+
Sbjct: 178  LLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSSDH 237

Query: 848  SITXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFG 1027
            SIT             +SRSG PNFE+HE+EAN+LQAAV  YLQFRGTGKASRDVD RFG
Sbjct: 238  SITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKRFG 297

Query: 1028 VNKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEER 1207
            ++KE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEER
Sbjct: 298  IHKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEER 357

Query: 1208 VNQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINR 1387
            V+QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VFINR
Sbjct: 358  VSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINR 417

Query: 1388 PPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFS 1567
            PPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL AKAEV+ELF+
Sbjct: 418  PPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVLELFA 477

Query: 1568 VEKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SN 1744
            V KQLLSSHTGNFNLQLATDSLLSLK++F  YF  +AAAQQLAMF+P  L   +V+    
Sbjct: 478  VGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLAMFLPMALPDSAVVDVRK 537

Query: 1745 SGPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGP 1924
            SG +WT  QIL  +LP  FD  GE HTI  S+ L +D++RD+++SI+ND++TS++F+KGP
Sbjct: 538  SGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLISSILNDVITSIYFMKGP 597

Query: 1925 KEVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSE 2104
             +VL+FFNS+Q LLME+L +EGFS+SLRDF++ + V + IQE IQ +S LL+HLRSSY+E
Sbjct: 598  NDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQERIQCMSKLLHHLRSSYNE 657

Query: 2105 SIALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFY 2284
            S+ +QL+ +LR+ K+PV +F+LKSS +G LIDSKSESA +KVVQQIGFLG+Q+SDRGKFY
Sbjct: 658  SVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGFLGLQISDRGKFY 717

Query: 2285 SAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRG 2464
            +  LV DM+ +FQK+YPS    P+EEFGLV   LF GLDPYQ M+HSISSREVIVRSTRG
Sbjct: 718  TKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRG 777

Query: 2465 LTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVL 2641
            LTEPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQFEYG +  +N+ SEFCAGDPVGVL
Sbjct: 778  LTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVL 837

Query: 2642 AATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHC 2821
            AATAMSNPAYKAVLD        WEMMKEILLCGV+FKND SDRRVILYLN+C C R +C
Sbjct: 838  AATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYC 897

Query: 2822 QENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNI 2992
            +E AA +VKNHL KV LKD A EFLIEY  +     + E   G +GHI LN+  L    I
Sbjct: 898  REKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENLGI 957

Query: 2993 SMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREA 3172
            S+ ++ E+CQ+ I+  QKKKK+ NLFK I L                 + PC++F W +A
Sbjct: 958  SVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWPDA 1017

Query: 3173 KIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELAL 3352
              D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANI WISPD  SWIRSPSK  +GELAL
Sbjct: 1018 SDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGELAL 1077

Query: 3353 DIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRL 3532
            DI+LEKEAVK+ GDAWR+LMD CLP+IHL+DT RSIPYAIKQV EL+GISCAFEQAV+RL
Sbjct: 1078 DIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVKRL 1137

Query: 3533 STSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRK 3712
            STSVTMVTKGVLKDHL+LLANSMTC+G  +GFN GGIK+LSRSL VQ+PF  ATLFTPRK
Sbjct: 1138 STSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTPRK 1197

Query: 3713 CFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHM 3892
            CFERAAEKCHVD+LSSIVASC+WGKHV VGTGS FE+L NT   E       D Y+FLH+
Sbjct: 1198 CFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFLHL 1257

Query: 3893 VNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLN----- 4057
            V S S  E  GTSCLGAEID+L+ + D M   LSP R+SG E  TFED  EF  N     
Sbjct: 1258 VRSTSAQEVEGTSCLGAEIDELEDDED-MGLYLSPNRDSGSEMPTFEDRAEFDYNENLDE 1316

Query: 4058 -------------GDDKDGFS-----------KQDANEPDS---WGKKVN---------- 4126
                         G  K G S           ++  N+ DS   WGKKV+          
Sbjct: 1317 GKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDGSNPQQSGVT 1376

Query: 4127 SEENDWMKIGEQ---STYAEENQDN--SAWGKKVDSDGG-GWAKKPE----QSWGKKAEE 4276
             +   W K GE    S++ ++ + +  S+WGKK + DGG  W KK E     SWGKK  E
Sbjct: 1377 EQSESWGKKGETDGGSSWGKKGETDVGSSWGKKAEMDGGSSWGKKAETDGGSSWGKKG-E 1435

Query: 4277 TQDNSAWGKKVDSDGG-GWAKKPEQ---SSWGKKAEETQDNSAWGKKVDSD-GGGWAKKP 4441
            T   S+WGKK ++DGG  W KK E    SSWGKKA ET   S+WGKK ++D G  W KK 
Sbjct: 1436 TDGGSSWGKKGETDGGSSWGKKAEMDGGSSWGKKA-ETDGGSSWGKKAETDAGSSWGKKG 1494

Query: 4442 EQ---SSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIED 4612
            E    SSWGKK  ET   S+WG+K   + G    +SWG    ++TD  S+WG+   K   
Sbjct: 1495 ETDGGSSWGKKG-ETDGGSSWGEKPETDGG----SSWG--KKAETDGGSSWGKKVDKDGG 1547

Query: 4613 IS------------------------SARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDN 4720
             S                        S + ++ GSWSS  G Q +    + W  G  VD 
Sbjct: 1548 SSWGKKVDKDGASWGKKVESENFPQLSGKEEQSGSWSS-WGKQVEKDGGSSW--GKKVDE 1604

Query: 4721 PDVSGSKENLWEAKQADQATQSSNVWG----SSSDWGK--FDSQSPTGEK--KMSQWGSS 4876
            P+     +NL ++   +Q+   S+ WG        WGK     QS  GE+   +S WG  
Sbjct: 1605 PE-----KNLHQSGNGEQSGFVSS-WGKVEKDGGSWGKKIESHQSGKGEESGSLSSWGKK 1658

Query: 4877 QK----QSLGSNVDSPDVSGSKE-----NLW----EAKQADQATQSSNIWGSSSEWGK 5011
             +     S G  VD    S  K+       W    E +   Q +      GS S WGK
Sbjct: 1659 VETDGGSSWGKKVDKDSSSWGKKVDKDGGSWGKKIETENTPQLSGKEEQSGSLSSWGK 1716



 Score =  129 bits (325), Expect = 2e-26
 Identities = 105/353 (29%), Positives = 148/353 (41%), Gaps = 42/353 (11%)
 Frame = +2

Query: 4016 EKLTFEDGVEFGLNGDDKDGFS---KQDANEPDSWGKKVNSEENDWMKIGEQSTYA---- 4174
            EK   + G  +G   +   G S   K D +   SWGKKV+ +   W K  E   +     
Sbjct: 1516 EKPETDGGSSWGKKAETDGGSSWGKKVDKDGGSSWGKKVDKDGASWGKKVESENFPQLSG 1575

Query: 4175 --EENQDNSAWGKKVDSDGGGWAKKPEQSWGKKAEETQDN-------------SAWGKKV 4309
              E++   S+WGK+V+ DGG        SWGKK +E + N             S+WGK V
Sbjct: 1576 KEEQSGSWSSWGKQVEKDGGS-------SWGKKVDEPEKNLHQSGNGEQSGFVSSWGK-V 1627

Query: 4310 DSDGGGWAKKPEQ------------SSWGKKAEETQDNSAWGKKVDSDGGGWAKKPEQ-- 4447
            + DGG W KK E             SSWGKK E T   S+WGKKVD D   W KK ++  
Sbjct: 1628 EKDGGSWGKKIESHQSGKGEESGSLSSWGKKVE-TDGGSSWGKKVDKDSSSWGKKVDKDG 1686

Query: 4448 SSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIEDIS--S 4621
             SWGKK E   +    G++          +SWG     + D  S+WG+   + E+ +  S
Sbjct: 1687 GSWGKKIETENTPQLSGKE----EQSGSLSSWG--KKVEKDGGSSWGKKVDEPENNTQQS 1740

Query: 4622 ARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSKENLWEAKQADQATQSSNVWG 4801
               ++ GSWSS             W      D     G K+           + S + WG
Sbjct: 1741 GSGEQSGSWSS-------------WGKKVEKDGGSWDGPKQ-----------SNSESSWG 1776

Query: 4802 SSSDWGKFDSQSPTGEKKMSQ----WGSSQKQSLGSNVDSPDVSGSKENLWEA 4948
             + + G   S +  G K++ Q    W SS  +    N  + D S +K   W +
Sbjct: 1777 KAPNGGGLGSATAEGNKRLDQSVNDWSSSVSRDGQLNEPTHDDS-TKNGGWNS 1828



 Score = 95.1 bits (235), Expect = 8e-16
 Identities = 73/259 (28%), Positives = 102/259 (39%), Gaps = 77/259 (29%)
 Frame = +2

Query: 4031 EDGVEFGLNGDDKDGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWGKK 4210
            +DG  +G   +       +++    SWGKKV ++       G  S   + ++D+S+WGKK
Sbjct: 1629 KDGGSWGKKIESHQSGKGEESGSLSSWGKKVETD-------GGSSWGKKVDKDSSSWGKK 1681

Query: 4211 VDSDGGGWAKKPE-----------------------------QSWGKKAEETQDN----- 4288
            VD DGG W KK E                              SWGKK +E ++N     
Sbjct: 1682 VDKDGGSWGKKIETENTPQLSGKEEQSGSLSSWGKKVEKDGGSSWGKKVDEPENNTQQSG 1741

Query: 4289 --------SAWGKKVDSDGGGW---AKKPEQSSWGK------------KAEETQDNSA-- 4393
                    S+WGKKV+ DGG W    +   +SSWGK            +  +  D S   
Sbjct: 1742 SGEQSGSWSSWGKKVEKDGGSWDGPKQSNSESSWGKAPNGGGLGSATAEGNKRLDQSVND 1801

Query: 4394 WGKKVDSDG-------------GGWAKKPEQSSWGKK---AEETQSSSAWGQKTLVNAGD 4525
            W   V  DG             GGW        W  +    EE+  +  WGQ+     GD
Sbjct: 1802 WSSSVSRDGQLNEPTHDDSTKNGGW-NSSTVGGWNSQKVGVEESDKTPQWGQRRRNAKGD 1860

Query: 4526 NKQNS--WGNVSTSKTDNN 4576
             K+NS  WG+ S  +  NN
Sbjct: 1861 FKENSRGWGSASGGEWKNN 1879


>ref|XP_009623505.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Nicotiana tomentosiformis]
          Length = 1983

 Score = 1877 bits (4861), Expect = 0.0
 Identities = 1013/1763 (57%), Positives = 1222/1763 (69%), Gaps = 129/1763 (7%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME+SS     +  I+GI FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CESC
Sbjct: 1    MEESSSSKVADGTIRGITFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT E GQCEGHFGYIELP PIYHPDHVSE                            ER+
Sbjct: 61   GTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMQNRKVQVKHVGVLERM 120

Query: 497  MS-CHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRPL 670
            +S C E+V QISINE KT+DGA YLELKVP  +  L +  WNFLEKYG+RYG+ Y SRP+
Sbjct: 121  LSSCCEDVVQISINEGKTSDGASYLELKVPKNAANLPD--WNFLEKYGYRYGDGY-SRPM 177

Query: 671  LPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYS 850
            LPSEV+ IL+++ +++RKKLSAKGYFPQDGYI+Q+LPVPPNCLSVPD+SDG + MS+D+S
Sbjct: 178  LPSEVLTILRRIHEDSRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSSDHS 237

Query: 851  ITXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGV 1030
            IT             +SRSG+PNFE+HE+EAN+LQA+V  YLQFRGTGKASRDVD RFG 
Sbjct: 238  ITMLRKVLRQIDIIKSSRSGIPNFEAHEVEANDLQASVVQYLQFRGTGKASRDVDKRFGT 297

Query: 1031 NKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERV 1210
            NKE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEERV
Sbjct: 298  NKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEERV 357

Query: 1211 NQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRP 1390
            +QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VF+NRP
Sbjct: 358  SQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFVNRP 417

Query: 1391 PTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSV 1570
            PTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEVVELFSV
Sbjct: 418  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVVELFSV 477

Query: 1571 EKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNS 1747
             KQLLSSHTGNFNLQLATDSLLSLK++F KYF  R AAQQLAMF+   L  P+++    S
Sbjct: 478  GKQLLSSHTGNFNLQLATDSLLSLKLMFSKYFFDREAAQQLAMFLQMALPDPALVDVRKS 537

Query: 1748 GPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPK 1927
            G +WTA QIL  +LP   D  GE HTI  S+ L +++N+D+++SI+ND++TS++F+KGP 
Sbjct: 538  GTMWTALQILGTALPDGLDSCGETHTIGKSQFLGIEYNKDLLSSILNDVITSIYFMKGPN 597

Query: 1928 EVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSES 2107
            +VL+FFNS+Q LLME+L +EGFSVSLRDF+  + V + IQE +Q +S LL+HLRSSY+ES
Sbjct: 598  DVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKAVRDGIQERVQCMSKLLHHLRSSYNES 657

Query: 2108 IALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYS 2287
            + +QL+ +LR+ K+PV +F+ KSS IG LIDSKSESAL+KVVQQIGFLGMQ+SDRGKFYS
Sbjct: 658  VEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKSESALNKVVQQIGFLGMQISDRGKFYS 717

Query: 2288 AILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGL 2467
              LV DM+ +FQK+YPS    P+EEFGLVG  LF GLDPYQEM+HSISSREVIVRSTRGL
Sbjct: 718  KTLVNDMARLFQKKYPSAGSNPSEEFGLVGSCLFYGLDPYQEMIHSISSREVIVRSTRGL 777

Query: 2468 TEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLA 2644
            TEPGTLFKNLMAILRDV+ICYDGTVRN  SNSIIQFEYG +  +N  SEF AGDPVGVLA
Sbjct: 778  TEPGTLFKNLMAILRDVLICYDGTVRNVSSNSIIQFEYGASGGSNFPSEFGAGDPVGVLA 837

Query: 2645 ATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQ 2824
            ATAMSNPAYKAVLD        WEMMKEILLCGV+FKND SDRRVILYLN+C C R  C+
Sbjct: 838  ATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGCCR 897

Query: 2825 ENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNIS 2995
            E AA +VKNHL KV LKD A EFLIEY  Q     + E   G +GHI LN+  L    IS
Sbjct: 898  EKAAYLVKNHLSKVCLKDAADEFLIEYGGQQAGYENSETGTGLIGHITLNQGQLENLGIS 957

Query: 2996 MHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAK 3175
            + ++LE+CQ+ I+  Q++KK+ NLFK I L                 + PC++F W +A 
Sbjct: 958  VLEVLERCQENISSFQRRKKIGNLFKRIVLSVSEFCSFCYNSGSKCLNTPCLRFSWPDAS 1017

Query: 3176 IDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALD 3355
             D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANIVWISPD  +WIR+PSK   GELALD
Sbjct: 1018 DDHLERVSHILADMICPILLDTVIKGDPRVSSANIVWISPDTMTWIRNPSKSQSGELALD 1077

Query: 3356 IILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLS 3535
            I+LEKEAVK+ GDAWR+LMD CLP IHL+DT+RSIPYAIKQV EL+GISCAFEQAV+RLS
Sbjct: 1078 IVLEKEAVKQRGDAWRILMDSCLPFIHLIDTRRSIPYAIKQVQELIGISCAFEQAVKRLS 1137

Query: 3536 TSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKC 3715
            TSVTMVTKGVLKDHL+LLANSMTC+G  IGFN GGIK+LSR+L VQ+PF  ATLFTPRKC
Sbjct: 1138 TSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNAGGIKALSRALNVQIPFTEATLFTPRKC 1197

Query: 3716 FERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMV 3895
            FERAAEKCHVD+LSSIVASC+WGKHV VGTGSPFE+LWNT   EL      D Y+FLH+V
Sbjct: 1198 FERAAEKCHVDSLSSIVASCSWGKHVAVGTGSPFEVLWNTKNVELNIPDAHDVYSFLHLV 1257

Query: 3896 NSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF--GLNGDDK 4069
             S S  E  GTSCLGAE+++L+ E++ M   LSP R+SG +K TFED  EF  G+  ++ 
Sbjct: 1258 RSSSAQEVEGTSCLGAEVEELEVEDEDMGLYLSPDRDSGSDKPTFEDRAEFDNGIENENL 1317

Query: 4070 D-----------------------------GFSKQDANEPD---SWGKKVNSEENDWMKI 4153
            D                               +++  N+ D   SWG+KV+  EN+    
Sbjct: 1318 DEGKLSGSAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDEAENN---- 1373

Query: 4154 GEQSTYAEENQDNSAWG---KKVDSD---------GGGWAKKPEQSWGKKAEETQDN--- 4288
              QS   E+ +  SAWG   K+VDS+          G W+     +WGKK +E  ++   
Sbjct: 1374 PRQSGNGEQLESWSAWGGKAKEVDSNPQQSGNTAQSGSWS-----AWGKKVDEAGNSPRQ 1428

Query: 4289 ----------SAWGKKVDSDGGGWAKKPEQ-----------------SSWGKKAEETQDN 4387
                      S+WGKKV+ DGG W K+ E+                 SSWGKK E+  D+
Sbjct: 1429 SGNEEQSGSLSSWGKKVEKDGGSWGKRVEETENHNHQSGKDEKSGSLSSWGKKVEKDGDS 1488

Query: 4388 ----------SAWGKKVDSDGG-GWAKKPEQ-----------------SSWGKKAEETQS 4483
                      S+WGKKV+ DGG  W KK E+                 SSWGKK E+   
Sbjct: 1489 SWGKVEIDGGSSWGKKVEIDGGSSWGKKVEEAENHSHQSGKEEKSESLSSWGKKVEK-DG 1547

Query: 4484 SSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSASG 4663
             S+WG+K   + G     SWG     + + +S       K E +SS   Q +    S+ G
Sbjct: 1548 VSSWGKKVEKDGG-----SWGK-KVEQAEIHSQQSGKEEKSESLSSWGKQVEKDGGSSWG 1601

Query: 4664 AQNDSSKAAGWSLGSNVDNPDVSGSKENLWEAKQADQATQSSNVWGSSSDWG---KFDSQ 4834
             Q +     G S G  V+    S   E + EA+   + +      GS S WG   K D  
Sbjct: 1602 KQVEK----GGSWGKKVEKDGGSSWGEKV-EAENTPRPSGKGEQSGSWSSWGKQVKEDGG 1656

Query: 4835 SPTGEKKMSQWGSSQKQSLGSNVDSPDVSGSKE-----NLWEAK--------QADQATQS 4975
            +  GEK     GSS  + +    D P  SG+ E     + W  K           + + S
Sbjct: 1657 ASWGEKVEKDGGSSWGKKVDEPEDKPHQSGNGEQPGSWSSWGKKVEKDGGSWDGPKQSNS 1716

Query: 4976 SNIWGSSSEWGKFDSQSPTGEKK 5044
             + WG +++ G F S +  G ++
Sbjct: 1717 ESSWGKTTKGGGFGSAAAEGNRR 1739


>ref|XP_009802889.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Nicotiana sylvestris]
          Length = 2055

 Score = 1874 bits (4855), Expect = 0.0
 Identities = 1017/1825 (55%), Positives = 1226/1825 (67%), Gaps = 191/1825 (10%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME+SS     +  I GI FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CESC
Sbjct: 1    MEESSSSKVADGTISGITFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT E GQCEGHFGYIELP PIYHPDHVSE                            ER+
Sbjct: 61   GTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKVQVKHVGVLERM 120

Query: 497  M-SCHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRPL 670
            + SC E+V QISINE KT+DGA YLELKVP  +  L +  WNFLEKYG+RYG+ Y SRPL
Sbjct: 121  LPSCCEDVVQISINEGKTSDGASYLELKVPKNAANLPD--WNFLEKYGYRYGDGY-SRPL 177

Query: 671  LPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYS 850
            LPSEV+ IL+++ ++TRKKLSAKGYFPQDGYI+Q+LPVPPNCLSVPD+SDG + MS+D+S
Sbjct: 178  LPSEVLTILRRIHEDTRKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGNNIMSSDHS 237

Query: 851  ITXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGV 1030
            IT             +SRSG+PNFE+HE+EAN+LQA+V  YLQFRGTGKASRDVD RFG 
Sbjct: 238  ITMLRKVLRQIDIIKSSRSGIPNFEAHEVEANDLQASVVQYLQFRGTGKASRDVDKRFGT 297

Query: 1031 NKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERV 1210
            NKE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEE V
Sbjct: 298  NKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEETV 357

Query: 1211 NQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRP 1390
            +QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VF+NRP
Sbjct: 358  SQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFVNRP 417

Query: 1391 PTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSV 1570
            PTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEVVELFSV
Sbjct: 418  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVVELFSV 477

Query: 1571 EKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNS 1747
             KQLLSSHTGNFNLQLATDSLLSLK++F KYF  R AAQQLAMF+   L  P+++    S
Sbjct: 478  GKQLLSSHTGNFNLQLATDSLLSLKLMFSKYFFDREAAQQLAMFLQMALPDPALVDVRKS 537

Query: 1748 GPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPK 1927
            G +WTA QIL  +LP   D  GE HTI  S+ L +++N+D+++SI+ND++TS++F+KGP 
Sbjct: 538  GTMWTALQILGTALPDGLDSCGETHTIGKSQFLGIEYNKDLLSSILNDVITSIYFMKGPN 597

Query: 1928 EVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSES 2107
            +VL+FFNS+Q LLME+L +EGFSVSLRDF+  + V + IQE +Q +S LL+HLRSSY+ES
Sbjct: 598  DVLKFFNSLQPLLMENLCTEGFSVSLRDFYTSKAVRDGIQERVQCMSKLLHHLRSSYNES 657

Query: 2108 IALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYS 2287
            + +QL+ +LR+ K+PV +F+ KSS IG LIDSKSESAL+KVVQQIGFLGMQ+SDRGKFYS
Sbjct: 658  VEVQLEHHLRNEKLPVIDFVHKSSGIGVLIDSKSESALNKVVQQIGFLGMQISDRGKFYS 717

Query: 2288 AILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGL 2467
              LV DM+ +FQK+YPS    P+EEFGLVG  LF GLDPYQEM+HSISSREVIVRSTRGL
Sbjct: 718  KTLVNDMARLFQKKYPSAGSNPSEEFGLVGSCLFYGLDPYQEMIHSISSREVIVRSTRGL 777

Query: 2468 TEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLA 2644
            TEPGTLFKNLMAILRDV+ICYDGTVRN  SNSIIQFEYG +  +N  SEF AGDPVGVLA
Sbjct: 778  TEPGTLFKNLMAILRDVLICYDGTVRNVSSNSIIQFEYGASGGSNFPSEFGAGDPVGVLA 837

Query: 2645 ATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQ 2824
            ATAMSNPAYKAVLD        WEMMKEILLCGV+FKND SDRRVILYLN+C C R  C+
Sbjct: 838  ATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGCCR 897

Query: 2825 ENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNIS 2995
            E AA ++KNHL KV LKD A EFLIEY  Q     + E   G VGHI LN+  L    IS
Sbjct: 898  EKAAYLIKNHLSKVCLKDAADEFLIEYGGQQAGYENSETGTGLVGHITLNQGQLENLGIS 957

Query: 2996 MHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAK 3175
            + ++LE+CQ+ I+  Q++KK+ NLFK I L                 + PC++F W +A 
Sbjct: 958  VLEVLERCQENISSFQRRKKIGNLFKRIVLSASAFCSFCYNSGSKCLNTPCLRFSWPDAS 1017

Query: 3176 IDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALD 3355
             D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANIVW+SPD  +WIR+PSK   GELALD
Sbjct: 1018 DDHLERVSHILADMICPILLDTVIKGDPRVSSANIVWVSPDTMTWIRNPSKSQSGELALD 1077

Query: 3356 IILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLS 3535
            I+LEKEAVK+ GDAWR+LMD CLP IHL+DT+RSIPYAIKQV EL+GISCAFEQAV+RLS
Sbjct: 1078 IVLEKEAVKQRGDAWRILMDSCLPFIHLIDTRRSIPYAIKQVQELIGISCAFEQAVKRLS 1137

Query: 3536 TSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKC 3715
            TSVTMVTKGVLKDHL+LLANSMTC+G  IGFN GGIK+LSRSL +Q+PF  ATLFTPRKC
Sbjct: 1138 TSVTMVTKGVLKDHLVLLANSMTCAGNLIGFNAGGIKALSRSLNMQIPFTEATLFTPRKC 1197

Query: 3716 FERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMV 3895
            FERAAEKCHVD+LSSIVASC+WGKHV VGTGSPFE++WNT   EL      D Y+FLH+V
Sbjct: 1198 FERAAEKCHVDSLSSIVASCSWGKHVAVGTGSPFEVIWNTKNVELNIPDAHDVYSFLHLV 1257

Query: 3896 NSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF--GLNGDDK 4069
             S S  E  GTSCLGAE+++L+ E++ M   LSP R+SG +K TFED  EF  G+  ++ 
Sbjct: 1258 RSSSAQEVEGTSCLGAEVEELEVEDEDMGLYLSPDRDSGSDKPTFEDRAEFDNGIENENL 1317

Query: 4070 D-----------------------------GFSKQDANEPD---SWGKKVNSEEND---- 4141
            D                               +++  N+ D   SWG+KV+  EN+    
Sbjct: 1318 DEGKLSGSAWEKASSENVKSGGSWDMAKTQNGAEKAVNQSDSWSSWGRKVDDAENNPRQS 1377

Query: 4142 ----------------------------------WMKIGE--------QSTYAEENQDNS 4195
                                              W   G+        QS   E++   S
Sbjct: 1378 GNGEQLESWSAWGGKAKEVDSNPQQSGNTAQSGSWSAWGKKVDEAGNSQSGNEEQSGSLS 1437

Query: 4196 AWGKKVDSDGGGWAKKPEQ------------------SWGKKAEETQDN----------- 4288
            +WGKKV+ D G W KK E+                  SWGKK E+  D+           
Sbjct: 1438 SWGKKVEKDTGSWGKKVEEMESHNPQSGKDEKSGSLSSWGKKVEKDGDSSWGKKVEIDGG 1497

Query: 4289 SAWGKKVDSDGG-GWAKKPEQ-----------------SSWGKKAE-----------ETQ 4381
            S+WGKKV+ DGG  W KK E+                 SSWGKK E           E  
Sbjct: 1498 SSWGKKVEIDGGSSWGKKVEEAENYSHQSGKEEKSESLSSWGKKVEKDGVSSWGKKVEND 1557

Query: 4382 DNSAWGKKVDSDGGGWAKKPEQ-----------------SSWGKKAE-----------ET 4477
              S+WGKKV+ DGG W KK EQ                 SSWGKK E           E 
Sbjct: 1558 GVSSWGKKVEKDGGSWGKKVEQAENHSHQSWKEEKSESLSSWGKKVEKDGVSSWGKKVEN 1617

Query: 4478 QSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSA 4657
               S+WG+K   + G     SWG     + +N+S       K E +SS   + +    S+
Sbjct: 1618 DGVSSWGKKVEKDGG-----SWGK-KVEQAENHSHQSWKEEKSESLSSWGKKVEKDGVSS 1671

Query: 4658 SGAQNDSSKAAGWSLGSNVDNPDVSGSKENLWEAKQADQATQSSNVWGSSSDWG---KFD 4828
             G + ++   + W  G  V+    S   E + E++   + +      GS S WG   K D
Sbjct: 1672 WGKKGENDGVSSW--GKKVEKDGGSSWGEKV-ESENTPRPSGKGEQSGSWSSWGKQVKED 1728

Query: 4829 SQSPTGEKKMSQWGSSQKQSLGSNVDSPDVSGSKE-----NLWEAK--------QADQAT 4969
              + +G+K     GSS  + +    D P  SG+ E     + W  K           + +
Sbjct: 1729 GGASSGKKVEKDGGSSWGKKVDEPEDKPHQSGNGEQSGSWSSWGKKVEKDGGSLDGPKQS 1788

Query: 4970 QSSNIWGSSSEWGKFDSQSPTGEKK 5044
             S + WG +++ G F S +  G ++
Sbjct: 1789 NSESSWGKTTKGGGFGSAAAEGNRR 1813


>emb|CDP18669.1| unnamed protein product [Coffea canephora]
          Length = 1946

 Score = 1832 bits (4745), Expect = 0.0
 Identities = 978/1733 (56%), Positives = 1212/1733 (69%), Gaps = 100/1733 (5%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME+S   T+F  KI  I F LAT+QEICK+S+SDC I+HASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEESPTSTSFGGKITRISFSLATQQEICKSSISDCAITHASQLSNPFLGLPLEAGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            G  E GQC  HFGYIELP PIYHPDHV E                            ER+
Sbjct: 61   GASEPGQC--HFGYIELPIPIYHPDHVRELKRLLSLLCLKCLKIRNRKFQVKNVGVLERM 118

Query: 497  MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 673
            +S C EE SQ++INEA+  DGA YLELKVPS+ RL+   W+FLEKYG+RY    N RPLL
Sbjct: 119  LSSCCEEASQVAINEARNPDGALYLELKVPSKIRLQGNVWSFLEKYGYRYDK--NPRPLL 176

Query: 674  PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 853
             SEVMA+L+++  +T+KKLSAKGYFPQDGYI+Q+LPVPPNCLSVPD+SDG + MS D+S+
Sbjct: 177  ASEVMAMLRRLSSDTKKKLSAKGYFPQDGYILQYLPVPPNCLSVPDISDGTNVMSKDHSL 236

Query: 854  TXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 1033
            +             NSRSGMPNFESH+IEAN+LQ +VA Y +FRGTGKASRDVD RFGV+
Sbjct: 237  SLLKRALKQIEVIKNSRSGMPNFESHQIEANDLQISVAQYFEFRGTGKASRDVDPRFGVS 296

Query: 1034 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 1213
            KE N SSTKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV+EIGLPFEIAQ+ITFEERV+
Sbjct: 297  KESNTSSTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVNEIGLPFEIAQRITFEERVS 356

Query: 1214 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 1393
            QHNM +LQKLVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGD+VFINRPP
Sbjct: 357  QHNMNYLQKLVDEKLCLTYRDGMSTYSLREGSKGHTFLRPGQVVHRRIMDGDMVFINRPP 416

Query: 1394 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 1573
            TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSL A++EV+ELFSVE
Sbjct: 417  TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAARSEVLELFSVE 476

Query: 1574 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNSG 1750
            KQLLSSHTGNFNLQLATDSLLSLK++F+KYF  R AA+QLAMFVP  L  P+V+K  +SG
Sbjct: 477  KQLLSSHTGNFNLQLATDSLLSLKLMFKKYFFDRVAAEQLAMFVPAALPMPAVVKYRSSG 536

Query: 1751 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 1930
            P WT  Q+LQ +LP SF+CSGER+   +SE++ LDFNRD++ S   D++TS+FF KGPKE
Sbjct: 537  PFWTVLQLLQTALPASFECSGERYLTHSSELVKLDFNRDLLQSTFIDVITSIFFSKGPKE 596

Query: 1931 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2110
            VLRFFN +  LLME+LYSEGFSV L DF++P+ ++E++Q+++Q ISPLLYH+RS+ SESI
Sbjct: 597  VLRFFNFLTPLLMENLYSEGFSVCLEDFYIPKAIIEAVQQSLQDISPLLYHMRSTQSESI 656

Query: 2111 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 2290
             LQL+++LR VK PV+NF+LKSS +G+LIDSKSESAL+KVVQQIGFLGMQ+SD+GKFYS+
Sbjct: 657  KLQLENFLRGVKSPVSNFVLKSSAMGYLIDSKSESALNKVVQQIGFLGMQISDKGKFYSS 716

Query: 2291 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
             LV D++ +F+K+YPS   YP+EE+GLV   LF GLDPYQEMVHSISSREVIVRSTRGLT
Sbjct: 717  TLVNDLAQLFKKKYPSSGHYPSEEYGLVRSCLFYGLDPYQEMVHSISSREVIVRSTRGLT 776

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVLAA 2647
            EPGTLFKNLMAILRDV+ICYDGTVRN CSNSIIQFEYG+N   +  SEF AG+PVGVLAA
Sbjct: 777  EPGTLFKNLMAILRDVIICYDGTVRNMCSNSIIQFEYGMNHGISFQSEFGAGEPVGVLAA 836

Query: 2648 TAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 2827
            TAMSNPAYKAVLD        WEMMKEILLCGVNFKN+ SDRRVILYLN+C CGRK+C+E
Sbjct: 837  TAMSNPAYKAVLDSSPSSNSAWEMMKEILLCGVNFKNEVSDRRVILYLNDCGCGRKYCRE 896

Query: 2828 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 2998
            NAA +VKN L+KVSLKD A E LIEYR Q       E + G VGHIHLN+ ++  SNI+M
Sbjct: 897  NAAYVVKNQLRKVSLKDVAFELLIEYRQQYSVYESSETDTGLVGHIHLNEAMMKSSNITM 956

Query: 2999 HDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKI 3178
            ++IL KC++ I   QK+KKV   FK + L                 + PC++F  R+A  
Sbjct: 957  NEILSKCEERIISYQKRKKVGFKFKGVLLGVSDDCSFRQSSARKLAETPCLKFICRDASD 1016

Query: 3179 DNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDI 3358
              LE+ SH+L +T+CP L +T+IKGDPRVS+ NI+WISPD ++WI S  K  +GELALD+
Sbjct: 1017 YQLEQRSHVLAETICPALLETVIKGDPRVSSVNIIWISPDTSTWISSQCKSQRGELALDV 1076

Query: 3359 ILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLST 3538
            +LEK+AVK++GDAWRV+MD CLP+  L+DT RSIPYAIKQV ELLGISCAFEQAV+RLST
Sbjct: 1077 VLEKDAVKQTGDAWRVVMDACLPVTQLIDTNRSIPYAIKQVQELLGISCAFEQAVRRLST 1136

Query: 3539 SVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCF 3718
            SV +VTKGVLKDHL+LLANSMTC+G  IGFN GGIK+LSRSL VQVPF  ATL  PRKCF
Sbjct: 1137 SVMLVTKGVLKDHLVLLANSMTCAGNLIGFNIGGIKALSRSLDVQVPFTEATLSAPRKCF 1196

Query: 3719 ERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVN 3898
            ERAAEKCHVD+LSS+V SC+WGKHV VGTGSPF+IL +T K EL     +D Y+FL +V 
Sbjct: 1197 ERAAEKCHVDSLSSVVGSCSWGKHVAVGTGSPFDILLDTKKVELNQPAGIDVYDFLQLVR 1256

Query: 3899 SRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFG---LNGDDK 4069
              S  ++  T+CLGAEI++LD E++ M FDLSPVR+S  ++ TFED  E      N   K
Sbjct: 1257 GSSGGDETNTTCLGAEIENLDLEDEAMTFDLSPVRDS--DQPTFEDRHELENNLANPRSK 1314

Query: 4070 DGFSKQDANEPD--------------------------------SWGKKVNSEENDWMKI 4153
            +   ++   E D                                SWG     +E+++  +
Sbjct: 1315 ESIQRELGWERDSPQTAELGGGWEKASKAQNTSANVLVSDSAWASWGGGTVGKEDNFSTM 1374

Query: 4154 GEQSTYA------------EENQDNSAWGKKVDSD-GGGWAKKPEQSWGKKAEETQDNSA 4294
             ++ + +            +++  +S WGK VD++    +A +P  SW + A+++   + 
Sbjct: 1375 AKEDSRSFTDWNSTQPGSLKQSGSSSVWGKMVDNERDSSFAAEPRSSWEQAADKS--GNV 1432

Query: 4295 W-GKKV-DSDGGGWA----------------KKPEQSSWGKK-----AEETQDNSAWGKK 4405
            W GKKV DS    W                   P+   WG K      ++++ + AW KK
Sbjct: 1433 WTGKKVSDSAWSSWGSSPVDKEARFSNGVQKNSPKYGEWGAKELRSTGKQSESSPAW-KK 1491

Query: 4406 VDSDGGGWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTW 4585
            +DS G           W +K ++ Q  +A  Q T ++ G    +SW N    + D+ S  
Sbjct: 1492 IDSLGNLPLTAKASGGWDQKFDKDQRHAA--QTTALDPG---WSSWNNCEPVERDSFS-- 1544

Query: 4586 GRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLG------SNVDNPDVSGSKEN 4747
                 ++++    RS  DG W   S    D++K +G S G      +  ++P  +    +
Sbjct: 1545 ----KRVQE----RSSSDGEWGKKS---QDTAKQSGSSFGWGKKFEAGSNSPLTTNGSAS 1593

Query: 4748 L----WE------AKQADQATQSSNVWGS--SSDWGKFDSQSPTGEKKMS---QWGSSQK 4882
                 WE       +   QAT S   W S  S +  K +    +G+   S   +WG+ + 
Sbjct: 1594 CGSGGWELALDKAQRLVSQATVSDPTWSSWGSGETNKEEIILNSGQGDTSNDHKWGAKES 1653

Query: 4883 QSLGSNVDSPDVSGSKENLWEAKQADQATQSSNIWGSSSEWGKFDSQSPTGEK 5041
            +S G  +      G+K +  E K  +     +    + S+W K ++ +  GE+
Sbjct: 1654 ESTGKQLGFSSGWGTKVSSNENKTDENKDPVTVTTENYSDWSKMNTDAVQGER 1706


>ref|XP_010315461.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit
            1 [Solanum lycopersicum]
          Length = 1968

 Score = 1780 bits (4611), Expect = 0.0
 Identities = 915/1391 (65%), Positives = 1078/1391 (77%), Gaps = 16/1391 (1%)
 Frame = +2

Query: 143  MEDSSLPTTF-EAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCES 319
            ME+ SL +   +  +K I+FGLAT QEICK+S+SDCPI+H S L NPFLGLPLE G+CES
Sbjct: 1    MEEKSLSSKVSDGIVKRIKFGLATPQEICKSSISDCPITHPSLLLNPFLGLPLEAGRCES 60

Query: 320  CGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FER 493
            CGT E GQCEGHFGYIELP PIYHPDHVSE                            ER
Sbjct: 61   CGTAEPGQCEGHFGYIELPIPIYHPDHVSELKKMLSLLCLKCLKMKNRKFQVKNAGVLER 120

Query: 494  VMS-CHEEVSQISINEAKTTDGAYYLELKVPSRS-RLEEGFWNFLEKYGFRYGNMYNSRP 667
            ++S C E+VSQ+S+ E KT+DGA YLELKVP  + +L+E  WNFLEKYG+RYG+ Y SRP
Sbjct: 121  MLSSCCEDVSQVSVYEGKTSDGASYLELKVPKNAAKLQE--WNFLEKYGYRYGDGY-SRP 177

Query: 668  LLPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDY 847
            LLPSEV+AIL+++ ++TRKKLSAKGYFPQ+GYI+Q+LPVPPNCLSVPD+SDG + MS+D+
Sbjct: 178  LLPSEVLAILRRIREDTRKKLSAKGYFPQEGYILQYLPVPPNCLSVPDISDGNNIMSSDH 237

Query: 848  SITXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFG 1027
            SIT             +SRSG PNFE+HE+EAN+LQAAV  YLQFRGTGKASRDVD RFG
Sbjct: 238  SITMLRKVLRQIDIIKSSRSGTPNFEAHEVEANDLQAAVVQYLQFRGTGKASRDVDKRFG 297

Query: 1028 VNKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEER 1207
            ++KE   ++TKAWLEKMKTLFIRKGSGFSSRSVITGDP+KGV EIGLP EIAQKITFEER
Sbjct: 298  IHKEAADTTTKAWLEKMKTLFIRKGSGFSSRSVITGDPYKGVGEIGLPCEIAQKITFEER 357

Query: 1208 VNQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINR 1387
            V+QHNM +LQKLVD+KLCLTY+DG STYSLREGSKGHTFLR GQ+VHRRIMDGD VFINR
Sbjct: 358  VSQHNMAYLQKLVDEKLCLTYKDGSSTYSLREGSKGHTFLRPGQIVHRRIMDGDTVFINR 417

Query: 1388 PPTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFS 1567
            PPTTHKHSLQALSVY+HDDHTVKINPL+CGPLSADFDGDCIHLFYPQSL AKAEV+ELF+
Sbjct: 418  PPTTHKHSLQALSVYVHDDHTVKINPLMCGPLSADFDGDCIHLFYPQSLSAKAEVLELFA 477

Query: 1568 VEKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SN 1744
            V KQLLSSHTGNFNLQLATDSLLSLK++F  YF  +AAAQQLAMF+P  L   +V+    
Sbjct: 478  VGKQLLSSHTGNFNLQLATDSLLSLKLMFSHYFFDKAAAQQLAMFLPMALPDSAVVDVRK 537

Query: 1745 SGPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGP 1924
            SG +WT  QIL  +LP  FD  GE HTI  S+ L +D++RD+++SI+ND++TS++F+KGP
Sbjct: 538  SGAMWTTLQILGAALPDGFDSCGETHTIGKSQFLGIDYHRDLISSILNDVITSIYFMKGP 597

Query: 1925 KEVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSE 2104
             +VL+FFNS+Q LLME+L +EGFS+SLRDF++ + V + IQE IQ +S LL+HLRSSY+E
Sbjct: 598  NDVLKFFNSLQPLLMENLCTEGFSISLRDFYMTKAVRDGIQERIQCMSKLLHHLRSSYNE 657

Query: 2105 SIALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFY 2284
            S+ +QL+ +LR+ K+PV +F+LKSS +G LIDSKSESA +KVVQQIGFLG+Q+SDRGKFY
Sbjct: 658  SVEVQLEHHLRNEKLPVIDFVLKSSGMGVLIDSKSESAFNKVVQQIGFLGLQISDRGKFY 717

Query: 2285 SAILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRG 2464
            +  LV DM+ +FQK+YPS    P+EEFGLV   LF GLDPYQ M+HSISSREVIVRSTRG
Sbjct: 718  TKTLVHDMAQLFQKKYPSVGTNPSEEFGLVRSCLFYGLDPYQGMIHSISSREVIVRSTRG 777

Query: 2465 LTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVN-SANIASEFCAGDPVGVL 2641
            LTEPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQFEYG +  +N+ SEFCAGDPVGVL
Sbjct: 778  LTEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGSSGGSNLPSEFCAGDPVGVL 837

Query: 2642 AATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHC 2821
            AATAMSNPAYKAVLD        WEMMKEILLCGV+FKND SDRRVILYLN+C C R +C
Sbjct: 838  AATAMSNPAYKAVLDSSPSSNSSWEMMKEILLCGVSFKNDVSDRRVILYLNDCGCRRGYC 897

Query: 2822 QENAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNI 2992
            +E AA +VKNHL KV LKD A EFLIEY  +     + E   G +GHI LN+  L    I
Sbjct: 898  REKAAYVVKNHLSKVCLKDAADEFLIEYAGRQAGYENSETGTGLIGHIRLNQGQLENLGI 957

Query: 2993 SMHDILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREA 3172
            S+ ++ E+CQ+ I+  QKKKK+ NLFK I L                 + PC++F W +A
Sbjct: 958  SVLEVHERCQENISSFQKKKKIGNLFKRIVLSVSEFCSFCHNSGSKCLNAPCLRFSWPDA 1017

Query: 3173 KIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELAL 3352
              D+LE+ SH+L D +CP+L  T+IKGDPRVS+ANI WISPD  SWIRSPSK  +GELAL
Sbjct: 1018 SDDHLERVSHILADMICPILLDTVIKGDPRVSSANIAWISPDTMSWIRSPSKSQRGELAL 1077

Query: 3353 DIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRL 3532
            DI+LEKEAVK+ GDAWR+LMD CLP+IHL+DT RSIPYAIKQV EL+GISCAFEQAV+RL
Sbjct: 1078 DIVLEKEAVKQRGDAWRILMDSCLPVIHLIDTTRSIPYAIKQVQELIGISCAFEQAVKRL 1137

Query: 3533 STSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRK 3712
            STSVTMVTKGVLKDHL+LLANSMTC+G  +GFN GGIK+LSRSL VQ+PF  ATLFTPRK
Sbjct: 1138 STSVTMVTKGVLKDHLVLLANSMTCAGNLVGFNAGGIKALSRSLNVQIPFTEATLFTPRK 1197

Query: 3713 CFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHM 3892
            CFERAAEKCHVD+LSSIVASC+WGKHV VGTGS FE+L NT   E       D Y+FLH+
Sbjct: 1198 CFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIPDTRDVYSFLHL 1257

Query: 3893 VNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKD 4072
            V + S  E  GTSCLGAEID+L+++ D M   LSP R+SG E  TFED  EF  N +  +
Sbjct: 1258 VRNTSAQEVEGTSCLGAEIDELEEDED-MGLYLSPNRDSGSEMPTFEDRAEFDYNENLDE 1316

Query: 4073 GFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEE--NQDN--SAWGKKVDSDGGGWAK 4240
            G     A E  S G   +     W   G+    AEE  NQ +  SAWGKKVD      + 
Sbjct: 1317 GKPSGSAWEKASSGSVKSG--GSWDMAGKTQNGAEEGVNQSDSWSAWGKKVDGSNTQQSG 1374

Query: 4241 KPEQ--SWGKK 4267
              EQ  SWGKK
Sbjct: 1375 VTEQSESWGKK 1385


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1770 bits (4584), Expect = 0.0
 Identities = 944/1663 (56%), Positives = 1168/1663 (70%), Gaps = 60/1663 (3%)
 Frame = +2

Query: 146  EDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESCG 325
            EDSS  T  + +I GIRFGLATRQEIC ASVSDCPISHASQL+NPFLGLPLE GKCESCG
Sbjct: 3    EDSS--TILDGEISGIRFGLATRQEICIASVSDCPISHASQLTNPFLGLPLEFGKCESCG 60

Query: 326  TGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXFERVMS- 502
            T E GQCEGHFGYIELP PIYHP HVSE                          E++++ 
Sbjct: 61   TAEPGQCEGHFGYIELPIPIYHPGHVSELKRMLSLLCLKCLKIRKSKVTNNGITEQLLAP 120

Query: 503  CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPSE 682
            C ++  Q+S+ E + T+GA +LELK+PSRSR ++GFW+FL +YG+RYG+   SR LLPSE
Sbjct: 121  CCQDSPQVSVREFRPTEGACFLELKIPSRSRPKDGFWDFLARYGYRYGHNL-SRILLPSE 179

Query: 683  VMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITXX 862
            VM IL+++P++TRKKL  KGYFPQDGYI+Q+LPVPPNCLSVPD+SDG+S MS+D S++  
Sbjct: 180  VMEILRRIPEDTRKKLVRKGYFPQDGYILQYLPVPPNCLSVPDISDGVSIMSSDLSVSML 239

Query: 863  XXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKEI 1042
                        SRSG PNFESH+IEAN LQ+++  YL+ RGT K SR +DTRFG +KE 
Sbjct: 240  KKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSLDTRFGSSKEP 299

Query: 1043 NASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQHN 1222
            N SSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIGLPFEIAQ+ITFEERVN HN
Sbjct: 300  NESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRITFEERVNVHN 359

Query: 1223 MEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTTH 1402
            M+ LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPTTH
Sbjct: 360  MKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTH 419

Query: 1403 KHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQL 1582
            KHSLQALSVY+HDDHTVKINPLICGPLSADFDGDC+HLFYPQSL AKAEV+ELFSVEKQL
Sbjct: 420  KHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLELFSVEKQL 479

Query: 1583 LSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSN-SGPLW 1759
            LSSH+GN NLQLATDSLLSLK+LF +YFL++AAAQQL MFV   L RP+++KS  SGP W
Sbjct: 480  LSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPALLKSPCSGPCW 539

Query: 1760 TASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEVLR 1939
            TA QILQ +LP  FDC GERH IS S +L +D+NRDV+ S+VN+IVTS+F  KGP EVL+
Sbjct: 540  TALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIFSEKGPNEVLK 599

Query: 1940 FFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIALQ 2119
            FF+S+Q LLME+L+SEGFSVSL DF +P +V ++IQ+N++ IS LLY+LRS Y+E + LQ
Sbjct: 600  FFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLRSMYNELLQLQ 659

Query: 2120 LDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAILV 2299
             +++LR  K+PV NFIL SS +G+LIDSKS+SA++KVVQQIGFLG QLS++GKFYS  LV
Sbjct: 660  AENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSEKGKFYSRTLV 719

Query: 2300 KDMSSMFQKRYP-SCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTEP 2476
            + M+ +F+ +YP    DYP+ EFGL+    F GLDPY+EMVHSIS+RE+IVRS+RGL+EP
Sbjct: 720  EGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREIIVRSSRGLSEP 779

Query: 2477 GTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFC-AGDPVGVLAATA 2653
            GTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV +      F  AG+PVGVLAATA
Sbjct: 780  GTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAGEPVGVLAATA 839

Query: 2654 MSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENA 2833
            MSNPAYKAVLD        WE+MKEILLC VNFKND  DRRVILYLN+CDCGRK+C+ENA
Sbjct: 840  MSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCDCGRKYCRENA 899

Query: 2834 ALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISMHD 3004
            A +VKN LKK SLKDTA+EF+IEY  Q       E   G VGHIHLNK LL   N+SM +
Sbjct: 900  AYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLLLQDLNVSMQE 959

Query: 3005 ILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDN 3184
            + +KC++ IN  +KKK V   FK I L                +D+PC+ F W+  + DN
Sbjct: 960  VCQKCEETINSFRKKKNVGPFFKKIILSFRECCTFQHSCQSKGSDMPCLLFFWQGNRDDN 1019

Query: 3185 LEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIIL 3364
            LE+  H+L   +CPVL QTIIKGD RV T NI+WISPD  +WIR+P K  KGELALDI+L
Sbjct: 1020 LEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNPCKSRKGELALDIVL 1079

Query: 3365 EKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSV 3544
            EK AVK+ GDAWR+++D CLP++HL+DT+RSIPYAIKQV ELLGISCAF+QAVQRLS SV
Sbjct: 1080 EKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGISCAFDQAVQRLSKSV 1139

Query: 3545 TMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFER 3724
            TMV KGVLK+HL+LLANSMTC+G  IGFN+GG K+LSR+L +QVPF  ATLFTPRKCFE+
Sbjct: 1140 TMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPFTEATLFTPRKCFEK 1199

Query: 3725 AAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSR 3904
            A+EKCH D+LSSIVASC+WGKHVTVGTGS F++LW+T +     +  +D Y+FLH+V S 
Sbjct: 1200 ASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDGGIDIYSFLHLVRSG 1259

Query: 3905 SKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEF---------GLN 4057
            S  ++  T+CLGAE++DL  E++ +E  +SP   S  EK  FED  EF         G  
Sbjct: 1260 SYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSAEFQNTWENHVPGSG 1319

Query: 4058 GD---DKDGFSKQDANEPDSWGK----KVNSEENDWMKIGEQSTYAEENQDNSAWG-KKV 4213
            GD   +++  +     +P +W      KV  ++    +  ++S+ +    D   WG  K 
Sbjct: 1320 GDWAVNQNKETTASTLKPSAWSSWGTDKVTMKDTFSTREPDESSRSAGWDDKGTWGTDKA 1379

Query: 4214 DSDGGGWAKKPEQSWGKKAEETQD------NSAWGKKVD-SDGGGWAK---KP------E 4345
             +       +       + E  +D      +SAWGKK+D +D  GW K   KP      E
Sbjct: 1380 QNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKIDEADKTGWNKNDGKPQMDKLRE 1439

Query: 4346 QSSWG-KKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAG 4522
               W  K A+E    S +G  + S  G W K   Q    +  E   +  +W         
Sbjct: 1440 SYDWDCKVAQEKTTQSTYG-GISSTTGDWKKNELQMEVVQHDESPVNEHSWD-------A 1491

Query: 4523 DNKQNSWGNVSTSKTDNNSTWGRDTSKIEDISSARSQED---GSWSSASGAQNDSSKAAG 4693
            +  ++     +TS   ++ST G+D +K +  S +  Q D    SWSS+     + S    
Sbjct: 1492 NLPEDPLAQATTSVGWDSST-GKDWTKRKLQSPSEQQRDPAIKSWSSSHNVMKEQSNQPA 1550

Query: 4694 WSLGSNVDNPDVSG----SKENLWEAKQA---DQATQSSNVWG---------SSSDWGKF 4825
             + G   D+P   G     +++ W  + +   +  ++SS+ WG         SS  WG  
Sbjct: 1551 STHG--WDSPGAKGWNDVEEQSQWNQRGSAVKNDQSESSHGWGPSNEQNQLPSSQGWGSP 1608

Query: 4826 DSQSPTGEKKMSQWGSSQKQSLGSNVDSPDVSGSKENLWEAKQ 4954
            ++ +    +  SQWG  Q     S  +     GS    W+ K+
Sbjct: 1609 NAGAGHESETQSQWG--QPSGKKSRPEGSRGWGSNNTEWKNKK 1649


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Citrus sinensis]
            gi|985437836|ref|XP_015383415.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Citrus sinensis]
          Length = 1865

 Score = 1740 bits (4506), Expect = 0.0
 Identities = 930/1675 (55%), Positives = 1156/1675 (69%), Gaps = 52/1675 (3%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME+++  T  E +I GIRFGLAT++EIC AS+SDC ISHASQL+NPFLGLPLE GKCESC
Sbjct: 1    MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT E G+CEGHFGYIELP PIYHP H+SE                            +R+
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKHMLSLLCLKCLKMKSTKFQIKNDGVAQRL 120

Query: 497  MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 673
            +S C EE SQ+SI + KTTDGA+YLELK+PS+ RL  GFWNFLE+YGFRYG+   +R LL
Sbjct: 121  LSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSL-TRTLL 179

Query: 674  PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 853
             SEV  +LK++P+ETRKKL+ KGYFPQDGYI+++LPVPPNCLSVPD+SDG+STMS+D SI
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 854  TXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 1033
                          +SRSG PNFES E+E+N+LQ AV  YL+ RGT K+SRDVD RFGV+
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVS 299

Query: 1034 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 1213
            ++ N S+TKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERVN
Sbjct: 300  QDPN-STTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 1214 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 1393
             HN+ +LQ+LVD+KLCLTY DG S+YSLREGSKGHTFLR GQVVHRRIMDGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 1394 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 1573
            TTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 1574 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSGP 1753
            KQLLSSH GN NLQLATD+LLSLK++F+KYFL +A  QQLAMF  + L RP++ K+    
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPALSKARCSA 538

Query: 1754 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 1933
             WTA QILQ  LPP FD  G+R+ I  SEVL  DF+RD + S++N+IVTS+FF KGP+EV
Sbjct: 539  RWTALQILQSVLPPGFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSIFFEKGPEEV 598

Query: 1934 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2113
            L FF+S+Q LLME+L+++GFSVSL DF L +  L +IQ+ IQ +  LLYH  S+ +E + 
Sbjct: 599  LEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELVD 658

Query: 2114 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 2293
            LQ+++++R VK+ V  FILKSS +G+LIDSKS+SA+SKVVQQ GFLG+QLSDRGKFYS  
Sbjct: 659  LQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSKT 718

Query: 2294 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 2473
            LV+D++S F++ YP   +YP  ++GL+    F GLDPY+EM HSIS+REVIVRS+RGL+E
Sbjct: 719  LVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLSE 778

Query: 2474 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAATA 2653
            PGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+    S F AG+PVGVLAATA
Sbjct: 779  PGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAATA 838

Query: 2654 MSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQENA 2833
            MSNPAYKAVLD        WE+MKEILLC V+F ND  DRRVILYLN+C CGRK+CQE A
Sbjct: 839  MSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQERA 898

Query: 2834 ALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDILE 3013
            A +VKN LK+VSLKD A+EFLIEY+   +  + + G VGHIHLNK LL    ISMHDIL 
Sbjct: 899  AYMVKNQLKRVSLKDAAVEFLIEYKKPEIISD-DEGLVGHIHLNKILLEDLRISMHDILP 957

Query: 3014 KCQDAINI---QQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDN 3184
            KCQ+ +     ++K KKV   FKN  L                +++PC+ F  R A    
Sbjct: 958  KCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCLMFVLRGASDSY 1017

Query: 3185 LEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIIL 3364
            L+K S +L + + PVL +TIIKGDPR+ +ANI+WISPD  +WIR+PSK  KGELALD++L
Sbjct: 1018 LDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSKNRKGELALDVVL 1077

Query: 3365 EKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSV 3544
            EK  VK+SGDAWR ++D CLP+ HL+DT+RS+PYAIKQV ELLG+SCAFEQAVQRLS SV
Sbjct: 1078 EKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSASV 1137

Query: 3545 TMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFER 3724
            TMV KGVLK+HL+LLANSMTC+G  +GFN+GG K+LSRSL VQVPF  ATLFTPRKCFE+
Sbjct: 1138 TMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFTPRKCFEK 1197

Query: 3725 AAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSR 3904
            AAEKCH DNLSS+VA+C+WGKHV VGTGS F++LW T   E   +  VD Y+FLHMV S 
Sbjct: 1198 AAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRSS 1257

Query: 3905 SKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSK 4084
            +  E+  T CLG E+D L+ E D   + LSP      +K  FED VE     D     +K
Sbjct: 1258 TGIEESDTGCLGEEVDGLEDEFD---WSLSPEHNLCSDKPVFEDLVE-----DQSWLENK 1309

Query: 4085 QDANEPDSWGKKVNSEENDWMKIGEQSTYAEEN-QDNSAWGKKVD---SDGGGWAKKP-- 4246
            Q+    DS      S E+ W K+G          +   AWGK  D      G  ++KP  
Sbjct: 1310 QENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKPSG 1369

Query: 4247 ---EQSWGKKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEETQDNSAWGKKVDSD 4417
               E SWG+ + +  +N   G         W     ++SWGK   +  +N +   K  S 
Sbjct: 1370 WGTEASWGESSCDKWENV--GSPAAKSFSEWG---TEASWGKSFGDKPENVSPAAKTSS- 1423

Query: 4418 GGGWAKKPEQSSWGKKAEETQSS---------SAWGQKTLVNAGDNKQNSWGNVSTSKTD 4570
              GW     ++SWGK + + Q +         S WG K   + G + ++    V T+   
Sbjct: 1424 --GWG---SEASWGKSSGDRQENVGGSASKPLSGWGAK--ASWGKSSEDKLEEVETTVAK 1476

Query: 4571 NNSTWGRDTS-------KIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDV 4729
             +S WG + S        +E +++        W + +    DS K++ WS   +  N   
Sbjct: 1477 PSSAWGTEASWDKSSEVTLEKVAAPAENPLSGWGTEA---QDSGKSSDWSEWKDHANATA 1533

Query: 4730 S----GSKEN-------LWEAKQADQ-------ATQSSNVWGSSSDW---GKFDSQSPTG 4846
            S    GS+EN        W+ K  D+          SS+VWG+  D+   G  DS  P+ 
Sbjct: 1534 SWGRNGSEENSGWDTKASWKTKALDKLDDVGSAVENSSSVWGAREDFSTKGWEDSSKPSA 1593

Query: 4847 EKKMSQWGSSQKQSLGSNVDSPDVSGSKENLWEAKQADQATQSSNIWGSSSEWGK 5011
             +K     S   Q  G NV  PD  G+ ++ W  ++  +  + ++     S WGK
Sbjct: 1594 NEK-----SIVHQIGGWNV--PDAKGTDDSCWGKQKLTENAKGTD----DSSWGK 1637


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score = 1740 bits (4506), Expect = 0.0
 Identities = 933/1682 (55%), Positives = 1161/1682 (69%), Gaps = 59/1682 (3%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME+++  T  E +I GIRFGLAT++EIC AS+SDC ISHASQL+NPFLGLPLE GKCESC
Sbjct: 1    MEENTSSTILEGQIVGIRFGLATQKEICTASISDCSISHASQLANPFLGLPLEFGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT E G+CEGHFGYIELP PIYHP H+SE                            +R+
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKRMLSLLCLKCLKMKSTKLQIKNDGVAQRL 120

Query: 497  MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 673
            +S C EE SQ+SI + KTTDGA+YLELK+PS+ RL  GFWNFLE+YGFRYG+   +R LL
Sbjct: 121  LSSCCEEASQVSIVDVKTTDGAFYLELKLPSKFRLCAGFWNFLERYGFRYGDSL-TRTLL 179

Query: 674  PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 853
             SEV  +LK++P+ETRKKL+ KGYFPQDGYI+++LPVPPNCLSVPD+SDG+STMS+D SI
Sbjct: 180  ASEVKEMLKRIPEETRKKLAGKGYFPQDGYILEYLPVPPNCLSVPDISDGVSTMSSDLSI 239

Query: 854  TXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 1033
                          +SRSG PNFES E+E+N+LQ AV  YL+ RGT K+SRDVD RFGV+
Sbjct: 240  AMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRDVDARFGVS 299

Query: 1034 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 1213
            ++ N S+TKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERVN
Sbjct: 300  QDPN-STTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRITFEERVN 358

Query: 1214 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 1393
             HN+ +LQ+LVD+KLCLTY DG S+YSLREGSKGHTFLR GQVVHRRIMDGD VFINRPP
Sbjct: 359  VHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDTVFINRPP 418

Query: 1394 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 1573
            TTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 419  TTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 478

Query: 1574 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSN-SG 1750
            KQLLSSH GN NLQLATD+LLSLK++F+KYFL +A AQQLAMF  + L RP++ K++ SG
Sbjct: 479  KQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPALSKAHCSG 538

Query: 1751 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 1930
            P WTA QILQ  LPP FD  G+R+ I  SEVL+ DF+RD + S++N+IVTS+FF KGP+E
Sbjct: 539  PRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIFFEKGPEE 598

Query: 1931 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2110
            VL FF+S+Q LLME+L+++GFSVSL DF L +  L +IQ+ IQ +  LLYH  S+ +E +
Sbjct: 599  VLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRMSTQNELV 658

Query: 2111 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 2290
             LQ+++++R VK+ V  FILKSS +G+LIDSKS+SA+SKVVQQ GFLG+QLSDRGKFYS 
Sbjct: 659  DLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSDRGKFYSK 718

Query: 2291 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
             LV+D++S F++ YP   +YP  ++GL+    F GLDPY+EM HSIS+REVIVRS+RGL+
Sbjct: 719  TLVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIVRSSRGLS 778

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 2650
            EPGTLFKNLMA+LRDVVICYDGTVRN CSNSIIQF+Y VN+    S F AG+PVGVLAAT
Sbjct: 779  EPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLAAT 838

Query: 2651 AMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 2830
            AMSNPAYKAVLD        WE+MKEILLC V+F ND  DRRVILYLN+C CGRK+CQE 
Sbjct: 839  AMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGRKYCQER 898

Query: 2831 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 3010
            AA +VKN LK+VSLKD A+EFLIEY+   +  + + G VGHIHLNK LL    ISMHDIL
Sbjct: 899  AAYMVKNQLKRVSLKDAAVEFLIEYKKPEIISD-DEGLVGHIHLNKILLEDLRISMHDIL 957

Query: 3011 EKCQDAINI---QQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKID 3181
             KCQ+ +     ++K KKV   FKN  L                +++PC+ F  R A   
Sbjct: 958  PKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCLMFVLRGASDS 1017

Query: 3182 NLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDII 3361
             L+K S +L + + PVL +TIIKGDPR+ +ANI+WISPD  +WIR+PSK  KGELALD++
Sbjct: 1018 YLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSKNRKGELALDVV 1077

Query: 3362 LEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTS 3541
            LEK  VK+SGDAWR ++D CLP+ HL+DT+RS+PYAIKQV ELLG+SCAFEQAVQRLS S
Sbjct: 1078 LEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCAFEQAVQRLSAS 1137

Query: 3542 VTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFE 3721
            VTMV KGVLK+HL+LLANSMTC+G  +GFN+GG K+LSRSL VQVPF  ATLF PRKCFE
Sbjct: 1138 VTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTEATLFMPRKCFE 1197

Query: 3722 RAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNS 3901
            +AAEK H DNLSS+VA+C+WGKHV VGTGS F++LW T   E   +  VD Y+FLHMV S
Sbjct: 1198 KAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGVDVYDFLHMVRS 1257

Query: 3902 RSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFS 4081
             +  E++ T CLG E+D L+ E D   + LSP      +K  FED VE     D     +
Sbjct: 1258 STGIEELDTGCLGEEVDGLEDEFD---WSLSPEHNLCSDKPIFEDLVE-----DQSWLEN 1309

Query: 4082 KQDANEPDSWGKKVNSEENDWMKIGEQSTYAEEN-QDNSAWGKKVD---SDGGGWAKKP- 4246
            KQ+    DS      S E+ W K+G          +   AWGK  D      G  ++KP 
Sbjct: 1310 KQENENWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPSRKPS 1369

Query: 4247 ----EQSWGKKAEETQDN---------SAWGKKVDSDGGGWAKKPE-------------- 4345
                E SWG+ + +  +N         S WG +  S G  +  KPE              
Sbjct: 1370 GWGTEASWGESSSDKWENVGSPAAKSFSEWGTEA-SWGKSFGDKPENVRSPAAKTSSGWG 1428

Query: 4346 -QSSWGKKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEE---------TQSSSAW 4495
             ++SWGK   + Q+N   G+       GW  K   +SWGK +E+          + SSAW
Sbjct: 1429 SEASWGKSPGDRQENV--GRSASKPLSGWGAK---ASWGKSSEDKLEEVETTVAKPSSAW 1483

Query: 4496 GQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSASGAQND 4675
            G  T  +   + + +   V+    +  S WG +       S     +D + ++AS  +N 
Sbjct: 1484 G--TEASWDKSSEVTLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWKDHANATASWGRNG 1541

Query: 4676 SSKAAGWSLGSNVDNPDVSGSKENLWEAKQADQ-------ATQSSNVWGSSSDW---GKF 4825
            S + +GW   ++             W  K  D+          SS+VWG+  D+   G  
Sbjct: 1542 SEENSGWDTKAS-------------WNTKALDKLDDVGSAVENSSSVWGAREDFSTKGWE 1588

Query: 4826 DSQSPTGEKKMSQWGSSQKQSLGSNVDSPDVSGSKENLWEAKQADQATQSSNIWGSSSEW 5005
            DS  P+  +K     S   Q  G NV  PD  G+ ++ W  ++  +  + ++     S W
Sbjct: 1589 DSSKPSANEK-----SIVHQIGGWNV--PDAKGTDDSSWGKQKLTENAKGTD----DSSW 1637

Query: 5006 GK 5011
            GK
Sbjct: 1638 GK 1639


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score = 1738 bits (4501), Expect = 0.0
 Identities = 930/1745 (53%), Positives = 1165/1745 (66%), Gaps = 122/1745 (6%)
 Frame = +2

Query: 137  KEMEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCE 316
            K ME++   T  + ++ GIRFGLAT +EI  ASVS C I+H+SQL+NP+LGLPLE GKC+
Sbjct: 7    KAMEENVQFTILDGEVVGIRFGLATPKEISTASVSGCSINHSSQLTNPYLGLPLEFGKCQ 66

Query: 317  SCGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FE 490
            SCGT EAG+CEGHFGYIELP PIYHP H+SE                            E
Sbjct: 67   SCGTSEAGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKTNKFQAKSNGVAE 126

Query: 491  RVMSCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPL 670
            R+ SC EE SQIS+ E KTTDGA +L+LK+PSR RL +GFW+FL++YGF YG     R L
Sbjct: 127  RLFSCCEEASQISVKEIKTTDGALFLQLKLPSRMRLNDGFWSFLDRYGFHYGGDDTIRSL 186

Query: 671  LPSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYS 850
            LP EVM +LK++PQ+TRKKL+ KGYFPQ+GYI+++LPVPPNCLSVPD+SDG+S MS+D S
Sbjct: 187  LPCEVMEMLKRIPQDTRKKLARKGYFPQEGYIMRYLPVPPNCLSVPDISDGVSIMSSDLS 246

Query: 851  ITXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGV 1030
            I+             +SRSG PNFESHE+EA +LQ+AV  YLQ RGT K SRDV++RFG+
Sbjct: 247  ISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDVESRFGI 306

Query: 1031 NKEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERV 1210
            +KE N SSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+PFEIAQ+ITFEERV
Sbjct: 307  HKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRITFEERV 366

Query: 1211 NQHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRP 1390
            + HN+++LQ+LVD+KLC+TYRDG STYSLR+GSKGHTFLR GQVVHRRIMDGD VFINRP
Sbjct: 367  SVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDTVFINRP 426

Query: 1391 PTTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSV 1570
            PTTHKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDC+HLFYPQSL AKAEV+ELFSV
Sbjct: 427  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELFSV 486

Query: 1571 EKQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIK-SNS 1747
            EKQLLSSH+GN NLQL TDSLLSLK +F+ YFL RAAAQQLAMFV   L +P++ K   S
Sbjct: 487  EKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTLWKVPYS 546

Query: 1748 GPLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPK 1927
             P+WT  QILQ +LP  FDC+GER+ IS  +++ +DF+RDV+ S++N+IV S+FF KGP 
Sbjct: 547  DPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIFFEKGPD 606

Query: 1928 EVLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSES 2107
             V +FFNS+Q LLME+L+SEGFSV L D ++ R V+ESI ++ + ISPLL  LRS+Y+E 
Sbjct: 607  AVFKFFNSLQPLLMENLFSEGFSVCLEDLYISRAVIESIHKDFKVISPLLSQLRSTYNEL 666

Query: 2108 IALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYS 2287
            + LQL++++R VK+ V  FI++SS IG LID KS+SA++KVVQQIGFLG+Q+SDRGKFYS
Sbjct: 667  VELQLENHIRQVKLRVAEFIVRSSSIGDLIDYKSDSAMTKVVQQIGFLGLQISDRGKFYS 726

Query: 2288 AILVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRG 2464
              LV+DM S F+++YPS   +YP+ ++GL+    F GLDPY+EMVHSIS+REVIVRS+RG
Sbjct: 727  KTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVIVRSSRG 786

Query: 2465 LTEPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSA-NIASEFCAGDPVGVL 2641
            L+EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGV +     S F AG+PVGVL
Sbjct: 787  LSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAGIKAQSLFPAGEPVGVL 846

Query: 2642 AATAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHC 2821
            AATAMSNPAYKAVLD        WE+MKEILLC VNFKND +DRR+ILYLN+C CGR +C
Sbjct: 847  AATAMSNPAYKAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRIILYLNDCGCGRNYC 906

Query: 2822 QENAALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMH 3001
            QE AA  VKNHL+KV LKD A  F+IEY+ Q  H   + G  GHIHL+K  L    +SM 
Sbjct: 907  QEKAAYKVKNHLQKVILKDIANHFMIEYKRQ--HTIADVGLAGHIHLDKMKLENLKVSME 964

Query: 3002 DILEKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKID 3181
             I +KC + +N  +KKKK+A  FK I++               W+  PC+ F W+++ I 
Sbjct: 965  VIHQKCTETVNFFRKKKKLALFFKRIEVSASQCCSFQESCADEWSGSPCLTFFWQDSDI- 1023

Query: 3182 NLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDII 3361
             +E+ S+L  D +CPVL +T+IKGD R+S ANI WISPD  +WIR+PS+  KGELALD++
Sbjct: 1024 RIERISNLFADMICPVLLETVIKGDHRISNANITWISPDTTTWIRNPSRTQKGELALDVV 1083

Query: 3362 LEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTS 3541
            +EK AVK+SGDAWR+++D CLP++HL+DT RSIPYAIKQ+ ELLG+SCAF+QAVQRLSTS
Sbjct: 1084 IEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVSCAFDQAVQRLSTS 1143

Query: 3542 VTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFE 3721
            VT+V KGVLK+HL+LLANSMTC+G  +GFN+GG KSLSRSL VQVPF +ATLFTPRKCFE
Sbjct: 1144 VTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPFTDATLFTPRKCFE 1203

Query: 3722 RAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNS 3901
            RAAEKCHVD LSSIVASC+WGK+V VGTGS F++LW+  +A L     +D Y FL+MV  
Sbjct: 1204 RAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEGSIDVYEFLNMVRC 1263

Query: 3902 RSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGD------ 4063
             +  E+  T+CLGA++DDL  ++   +++LSP    G +K TFED  EF    D      
Sbjct: 1264 SANGEE-STACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRAEFQNCLDNQPADW 1322

Query: 4064 DKDGFSKQDANEPDSWGKKVNSE---ENDWMKIGEQ--------STYAEENQDNS-AWGK 4207
            +K  ++   ++   +WG   N E   EN W   G          ST A E  D S +W  
Sbjct: 1323 EKASYAVNGSSSGGNWGGDKNMETDKENSWSGWGRNAAETQNALSTKAHEESDKSNSW-- 1380

Query: 4208 KVDSDGGGWAKKPEQSWGKKAEETQDNSAWG-----------KKVDSDGG---GWAKK-- 4339
                  GGW  +          ET   S WG           KKV  +     GW  K  
Sbjct: 1381 ---DTAGGWQAQANGKAENNVAETDSWSGWGTRKTESSDVPAKKVQEESEHSIGWDTKAA 1437

Query: 4340 -------------PEQSSW--------------GKKAEET-------QDNSAWGKKVDSD 4417
                         PE  SW              G+KA+E           +AWG++ + D
Sbjct: 1438 WQTNISGGTPKSVPEPDSWSGWETRKNEVPDDHGRKAQEETGRPGDHDAGAAWGRRAEVD 1497

Query: 4418 GGGWA--KKPEQS-SWGKKAEETQSSSAWG---QKTLVNAGDNKQNSWGNVSTSKTDNNS 4579
               W   K P+ S SWG   E   + S  G    K   + G   Q  WG   +   + + 
Sbjct: 1498 DNSWGKPKSPQVSLSWGTPKEPVNAGSLRGWDLPKAGGSNGSEIQPQWG--KSKPPEGSH 1555

Query: 4580 TWGRDTSKIEDISSARSQEDGS--------W--------SSASGAQNDSSKAAGWSLGSN 4711
             WG     ++     +    GS        W        S   G   +  KAAGW L  N
Sbjct: 1556 GWGSSNEPVKAAGWNQPNAGGSDATKRQQQWEKPKSPEASHGWGPSKEPVKAAGWDL-EN 1614

Query: 4712 VDNPDVSGSKENLWEAKQADQATQS------SNVWGSSSDWGKFDSQSPTGEKKMSQWGS 4873
                D S  ++  W   ++ + +QS      S   GSS  WG  +++   G ++  QWG 
Sbjct: 1615 AGGGDGS-ERQQQWGKSKSSEVSQSWGSPKESVKAGSSQGWGMPNAEGSEGGERPRQWGK 1673

Query: 4874 SQKQSLGSNVDSPDVS------------------GSKENLWEAKQAD---QATQSSNIWG 4990
             +   +     SP  S                  GS+   W  +  +      + S  WG
Sbjct: 1674 PKSPDVSQGWGSPKESVKAASSKGWGLPNAGATHGSERKQWGQQSGEFKKNRAEGSRGWG 1733

Query: 4991 SSSEW 5005
            S+ +W
Sbjct: 1734 SNPDW 1738


>ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Prunus mume]
          Length = 1855

 Score = 1733 bits (4487), Expect = 0.0
 Identities = 919/1663 (55%), Positives = 1162/1663 (69%), Gaps = 41/1663 (2%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME++S  T  E +I GI+FGLAT QEIC AS+S+C ISHASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT EAG+CEGHFGYIELP PI+HP+HVSE                            ER+
Sbjct: 61   GTSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM 120

Query: 497  MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 673
            +S C E+ SQ+SI E K TDG+  L+LK PS+SR   GFWNFLE+YGFRYG+ +  R LL
Sbjct: 121  LSSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGH-IRTLL 179

Query: 674  PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 853
            P EVM +LK++PQETRKKL+AKGYFPQDGYI+  +PVPPNCLSVP++SDG+S MS D SI
Sbjct: 180  PCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSI 239

Query: 854  TXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 1033
            +             +SRSG+PNFES  +EANELQA +  YLQ RGTGK SRD+D RFGVN
Sbjct: 240  SMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVN 299

Query: 1034 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 1213
            KE+NASSTKAWLEKM+TLFIRKGSGFSSRSVITGD F+ V+E+G+P+EIAQ+ITFEE+VN
Sbjct: 300  KELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVN 359

Query: 1214 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 1393
             HN+ +LQ+LVD KLCLTY+DG STYSLREGSKGHTFLR GQVVHRRIMDGD+VF+NRPP
Sbjct: 360  DHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPP 419

Query: 1394 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 1573
            TTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 420  TTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 479

Query: 1574 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSG- 1750
            KQLLSSH+G  NLQLATD+LLSLK++F+KYFL +AAAQQLAMF  + L RP+++K+NS  
Sbjct: 480  KQLLSSHSGKPNLQLATDALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAH 539

Query: 1751 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 1930
              WTA QILQ +LP  FDC+G+ + ++ SE+L++DF+   +A+++NDI TS+FF KG + 
Sbjct: 540  SYWTAFQILQTALPAHFDCNGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGEA 599

Query: 1931 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2110
            VL+FF+S+Q LLME+L+SEGFSV L DF + R  ++ IQ+NIQ  S LLYHLRS+Y+E +
Sbjct: 600  VLKFFDSLQPLLMENLFSEGFSVGLEDFSMSRASIQDIQKNIQDSSDLLYHLRSTYNEFV 659

Query: 2111 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 2290
              QL + +RSVK+PV++FIL+SS +G LIDSKS+SA++K+VQQIGFLG+QLSD+G+FYS 
Sbjct: 660  EFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSK 719

Query: 2291 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
             LV+D++S+   +YPS  DYP+ E+GLV    F GLDPY+ +VHSI++REVIVRS+RGL+
Sbjct: 720  TLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLS 779

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 2647
            EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN+ +     F AG+PVGVLAA
Sbjct: 780  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNTGSRHQHLFPAGEPVGVLAA 839

Query: 2648 TAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 2827
            TAMSNPAYKAVLD        WE+MKEILLC VNFKN+  DRRVILYLNNC CGRK+C+E
Sbjct: 840  TAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRE 899

Query: 2828 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 2998
             AA +VKN LKKVSLKDTA+EF+IEY +Q+        + G VGHIHLN+ +L + N+ +
Sbjct: 900  RAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLVNDAGLVGHIHLNEDMLRELNVGV 959

Query: 2999 HDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFC 3160
            HDIL+KCQ+ IN      + +KK  +   FKN  L                +D PC+ F 
Sbjct: 960  HDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSSAEKRSDSPCLMFF 1019

Query: 3161 WREAKIDNLEKASHL--LDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGP 3334
             +    D+LE  + L    D +CPVL +TIIKGDPR+ +ANI+WI PD  +WIRSP+K  
Sbjct: 1020 LQAT--DDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQ 1077

Query: 3335 KGELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFE 3514
            KGE ALD++LEK  +K+SGDAWR ++D CLP++HL+DT+RSIPYAIKQ+ ELLG+SCAF+
Sbjct: 1078 KGEWALDVVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFD 1137

Query: 3515 QAVQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNAT 3694
            QAVQRLST+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF  AT
Sbjct: 1138 QAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEAT 1197

Query: 3695 LFTPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDA 3874
            LFTPRKCFERAAEKCH+D+L+SIVASC+WGKHV VGTG+ F++LW+T + E      +D 
Sbjct: 1198 LFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGARFDVLWDTREVEFTQEGGLDV 1257

Query: 3875 YNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGL 4054
            +NFLHMV S +  E+  T  LGAE+DDL   ++  +   SP   S  ++  FED VEF  
Sbjct: 1258 FNFLHMV-STANVEEETTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEF-- 1314

Query: 4055 NGDDKDGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGW 4234
              DDK G    D  E  +W K               S++  ++     W   VD + G  
Sbjct: 1315 --DDKLG----DLPEKSNWEK--------------DSSFHTDSSGGKDW--SVDKNVGTV 1352

Query: 4235 AKKPE--QSWGKKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEETQDNSAWGKKV 4408
            A  P+   SWG +  +TQD+++   ++DS     +     S+WGK   +    S WG   
Sbjct: 1353 A-VPDVWSSWGTEKGKTQDSNSAEAQLDSKKS--SVLDTSSAWGKNPAKENTTSTWGTTT 1409

Query: 4409 DSD----GGGWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNN 4576
             S+    G G ++    S  GKK+    +SSAW   T   A ++  ++WG  + +K +  
Sbjct: 1410 ASENDWCGRGVSEDDSASLSGKKSGVLNTSSAWATNT---AREDAASAWG-TNPAKENTT 1465

Query: 4577 STWGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSKENLWE 4756
            STWG   +   D           W      Q+DS+               +SG K ++ +
Sbjct: 1466 STWGTTMASEND-----------WCGRGVGQDDSA--------------SLSGKKSSVSD 1500

Query: 4757 AKQADQATQSSNVWGSSSDWGKFDSQSPTGEKKMSQWG---SSQKQSLGSNV---DSPDV 4918
               A  A  +     ++S WGK     P  E   S WG   +S+    G  V   DS  +
Sbjct: 1501 TSSAWAANTARE--DAASAWGK----HPAKENTTSTWGTTKASENDWCGGGVGHDDSASL 1554

Query: 4919 SGSK------ENLWEAKQADQATQSSNIWG-------SSSEWG 5008
            SG K       ++W A  A +   +++ WG       ++S WG
Sbjct: 1555 SGKKSSVLNTSSVWAANTARE--DATSAWGKNPAKENTTSTWG 1595



 Score = 64.7 bits (156), Expect = 1e-06
 Identities = 67/273 (24%), Positives = 100/273 (36%), Gaps = 17/273 (6%)
 Frame = +2

Query: 4073 GFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAW--GKK--VDSDGGGWAK 4240
            G +    N   +WG  + SE NDW   G         QD+SA   GKK  V      WA 
Sbjct: 1456 GTNPAKENTTSTWGTTMASE-NDWCGRGV-------GQDDSASLSGKKSSVSDTSSAWAA 1507

Query: 4241 KPEQ-----SWGKKAEETQDNSAWGKKVDSD----GGGWAKKPEQSSWGKKAEETQDNSA 4393
               +     +WGK   +    S WG    S+    GGG       S  GKK+     +S 
Sbjct: 1508 NTAREDAASAWGKHPAKENTTSTWGTTKASENDWCGGGVGHDDSASLSGKKSSVLNTSSV 1567

Query: 4394 WGKKVDSDGGGWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDN 4573
            W           A++   S+WGK   +  ++S WG  T        +N W          
Sbjct: 1568 WAANT-------AREDATSAWGKNPAKENTTSTWGTTTA------SENDW---------- 1604

Query: 4574 NSTWGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSKENLW 4753
                GR+  K+E +    ++           Q+DS+  +GW   +   N   SG + + W
Sbjct: 1605 ---CGREAGKVEPVDLQPTK----------PQDDSASLSGWDSPTGDGN---SGERNHQW 1648

Query: 4754 EAKQADQAT----QSSNVWGSSSDWGKFDSQSP 4840
               + DQ      + +  W SS    K  ++ P
Sbjct: 1649 GQHRGDQTKKNRFEGARNWVSSPGEWKNKNRPP 1681


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score = 1731 bits (4483), Expect = 0.0
 Identities = 924/1688 (54%), Positives = 1170/1688 (69%), Gaps = 56/1688 (3%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME++S  T  E +I GI+FGLAT QEIC AS+S+C ISHASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEEASSSTILEGEITGIKFGLATHQEICTASISNCAISHASQLSNPFLGLPLEFGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT EAG+CEGHFGYIELP PI+HP+HVSE                            ER+
Sbjct: 61   GTSEAGKCEGHFGYIELPIPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM 120

Query: 497  MS-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 673
            +S C E+ SQ+SI E K TDG+  L+LK PS+SR   GFWNFLE+YGFRYG+ +  R LL
Sbjct: 121  LSSCCEDASQVSIGEIKPTDGSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDGH-IRTLL 179

Query: 674  PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 853
            P EVM +LK++PQETRKKL+AKGYFPQDGYI+  +PVPPNCLSVP++SDG+S MS D SI
Sbjct: 180  PCEVMEMLKRIPQETRKKLAAKGYFPQDGYILSQIPVPPNCLSVPEISDGVSVMSADPSI 239

Query: 854  TXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 1033
            +             +SRSG+PNFES  +EANELQA +  YLQ RGTGK SRD+D RFGVN
Sbjct: 240  SMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDIDARFGVN 299

Query: 1034 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 1213
            KE+NASSTKAWLEKM+TLFIRKGSGFSSRSVITGD F+ V+E+G+P+EIAQ+ITFEE+VN
Sbjct: 300  KELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRITFEEKVN 359

Query: 1214 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 1393
             HN+ +LQ+LVD KLCLTY+DG STYSLREGSKGHTFLR GQVVHRRIMDGD+VF+NRPP
Sbjct: 360  DHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDLVFVNRPP 419

Query: 1394 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 1573
            TTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 420  TTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 479

Query: 1574 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSG- 1750
            KQLLSSH+G  NLQLA D+LLSLK++F+KYFL +AAAQQLAMF  + L RP+++K+NS  
Sbjct: 480  KQLLSSHSGKPNLQLAADALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPALLKANSAH 539

Query: 1751 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 1930
              WTA QILQ +LP  FDCSG+ + ++ SE+L++DF+   +A+++NDI TS+FF KG ++
Sbjct: 540  SYWTAFQILQTALPAHFDCSGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVFFEKGGED 599

Query: 1931 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2110
            VL+FF+S+Q LLME+L+SEGFSV L DF++ R  ++ IQ+NIQ  S LLYHLRS+Y+E +
Sbjct: 600  VLKFFDSLQPLLMENLFSEGFSVGLEDFYMSRTSIQDIQKNIQDSSDLLYHLRSTYNEFV 659

Query: 2111 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 2290
              QL + +RSVK+PV++FIL+SS +G LIDSKS+SA++K+VQQIGFLG+QLSD+G+FYS 
Sbjct: 660  EFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSDKGRFYSK 719

Query: 2291 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
             LV+D++S+   +YPS  DYP+ E+GLV    F GLDPY+ +VHSI++REVIVRS+RGL+
Sbjct: 720  TLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIVRSSRGLS 779

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 2647
            EPGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYGVN  +     F AG+PVGVLAA
Sbjct: 780  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQHLFPAGEPVGVLAA 839

Query: 2648 TAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 2827
            TAMSNPAYKAVLD        WE+MKEILLC VNFKN+  DRRVILYLNNC CGRK+C+E
Sbjct: 840  TAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGCGRKYCRE 899

Query: 2828 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 2998
             AA +VKN LKKVSLKDTA+EF+IEY +Q+        + G VGHIHLN+ +L + NI +
Sbjct: 900  RAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDMLRELNIGV 959

Query: 2999 HDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFC 3160
            HDIL+KCQ+ IN      + +KK  +   FKN  L                +D PC+ F 
Sbjct: 960  HDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSCAEKRSDSPCLMFF 1019

Query: 3161 WREAKIDNLEKASHL--LDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGP 3334
             +    D+LE  + L    D +CPVL +TIIKGDPR+ +ANI+WI PD  +WIRSP+K  
Sbjct: 1020 LQAT--DDLETTTTLQYYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIRSPNKSQ 1077

Query: 3335 KGELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFE 3514
            KGE ALDI+LEK  +K+SGDAWR ++D CLP++HL+DT+RSIPYAIKQ+ ELLG+SCAF+
Sbjct: 1078 KGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFD 1137

Query: 3515 QAVQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNAT 3694
            QAVQRLST+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF  AT
Sbjct: 1138 QAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEAT 1197

Query: 3695 LFTPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDA 3874
            LFTPRKCFERAAEKCH+D+L+SIVASC+WGKHV VGTG  F++LW+T + EL     +D 
Sbjct: 1198 LFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQEGGLDV 1257

Query: 3875 YNFLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGL 4054
            +NFLHMV S +  E+  T  LGAE+DDL   ++  +   SP   S  ++  FED VEF  
Sbjct: 1258 FNFLHMV-STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDLVEF-- 1314

Query: 4055 NGDDKDGFSKQDANEPDSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGW 4234
              DDK G    D  E  +W K               S++  ++     W   VD + G  
Sbjct: 1315 --DDKLG----DLPEKSNWEK--------------DSSFHTDSNGGKDW--SVDKNVGTV 1352

Query: 4235 AKKPE--QSWGKKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEETQDNSAWGKKV 4408
            A  P+   SWG +  +TQD+++   ++DS     +     S+WGK   +    S WG   
Sbjct: 1353 A-VPDVWSSWGTEKGKTQDSNSAEAQLDSKKS--SVLDTSSAWGKNPAKENTTSTWGTTT 1409

Query: 4409 DSD----GGGWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNN 4576
             S+    G G  +    +  GKK+    +SSAW   T   A ++  ++WG  + +K ++ 
Sbjct: 1410 ASENDWCGRGVGEDDSATLSGKKSGVLNTSSAWATNT---AREDAASAWG-TNPAKENST 1465

Query: 4577 STWGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSKENLWE 4756
            STWG   +   D       +D S S +    +    ++ W+  +N    D + +    W 
Sbjct: 1466 STWGTTRANENDWCGREVGQDDSASLSVKKSSVLDTSSAWA--TNTAREDAASA----WG 1519

Query: 4757 AKQADQATQSSNVWG----SSSDW-----GKFDSQSPTGEKK------------------ 4855
               A + T S+  WG    S +DW     G  DS S +G+K                   
Sbjct: 1520 KHPAKENTTST--WGTTTASENDWCGRGVGHDDSASLSGKKSSVLNTSSVWATNTAREDA 1577

Query: 4856 MSQWGSSQKQSLGSNVDSPDVSGSKENLWEAKQAD-------QATQSSNIWGSSSEWGKF 5014
             S WG +  +   +   +   + + EN W  ++A        Q T+  +   S S W   
Sbjct: 1578 TSAWGKNPAKE--NTTSTWGTTTASENDWCGREAGKVEPVDLQPTKPQDDSASLSGW--- 1632

Query: 5015 DSQSPTGE 5038
               SPTG+
Sbjct: 1633 --DSPTGD 1638


>ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus x
            bretschneideri] gi|694366759|ref|XP_009361959.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus
            x bretschneideri]
          Length = 1960

 Score = 1724 bits (4465), Expect = 0.0
 Identities = 915/1687 (54%), Positives = 1162/1687 (68%), Gaps = 66/1687 (3%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME++S     + +I GI+FGLAT QEIC AS+SDC ISHASQLSNPFLGLPLE GKCESC
Sbjct: 1    MEEASTSNILDGEIVGIKFGLATHQEICTASISDCSISHASQLSNPFLGLPLEFGKCESC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXX--FERV 496
            GT E G+CEGHFGYIELP PI+HP+HVSE                            ER+
Sbjct: 61   GTSEPGKCEGHFGYIELPVPIFHPNHVSELKRMLSLLCLKCLKMKKNKFPTKNAGLAERM 120

Query: 497  M-SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLL 673
            + SC E+ +Q+SI E K TD +  L+LK PS+SR   GFWNFLE+YGFRYG+ +  R LL
Sbjct: 121  LASCCEDAAQVSIGETKPTDSSCSLQLKRPSKSRTPPGFWNFLERYGFRYGDDH-IRTLL 179

Query: 674  PSEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSI 853
            P EV+ +LK++PQ+TRKKL++KGYFPQDGYI++H+PVPPNCLSVP++SDG+S MS D SI
Sbjct: 180  PCEVLEMLKRIPQDTRKKLASKGYFPQDGYILRHIPVPPNCLSVPEISDGVSVMSADPSI 239

Query: 854  TXXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVN 1033
            +             +SRSG+PNFES  +EANELQA V  YLQ RGTGKASRD+D R GVN
Sbjct: 240  SMLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDIDARLGVN 299

Query: 1034 KEINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVN 1213
            +E+NASSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+E+G+P+EIAQ+ITFEE+VN
Sbjct: 300  RELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRITFEEKVN 359

Query: 1214 QHNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPP 1393
             HN+ +LQ+LVD KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRI+DGD+VF+NRPP
Sbjct: 360  DHNIRYLQQLVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDLVFVNRPP 419

Query: 1394 TTHKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVE 1573
            TTHKHSLQAL VY+HDDH VKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVE
Sbjct: 420  TTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVE 479

Query: 1574 KQLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNSG- 1750
            KQLLSSH+G  NLQ+ATDSLLSLK++F+ YFL ++AAQQLAMF  + L RP+++K+N+  
Sbjct: 480  KQLLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPALLKANAAR 539

Query: 1751 PLWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKE 1930
              WTA QILQ +LP  FD  GE++ ++ SE+L +DF+   +++++ND+ TS+FF KG ++
Sbjct: 540  SYWTALQILQTALPAHFDYCGEKYLVNKSEILKIDFSTSEVSAVMNDVATSVFFEKGGED 599

Query: 1931 VLRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESI 2110
            VL+FF+S+Q LLME+++SEGFSV L DF++ +  ++ IQ+NIQ  S LLYHLRS+Y+E +
Sbjct: 600  VLKFFDSLQPLLMENIFSEGFSVGLEDFYMSKTSIQDIQKNIQDTSDLLYHLRSTYNEFV 659

Query: 2111 ALQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSA 2290
              QL+S ++++K+PV+ FIL+SS  G LIDSKS+SA++KVVQQIGFLG+QLSD+G+FYS 
Sbjct: 660  EFQLESRIKNLKVPVSCFILESSAFGDLIDSKSDSAINKVVQQIGFLGLQLSDKGRFYSK 719

Query: 2291 ILVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
             LV+D++S++  +Y    +YP+ E+GLV    F GLDPY+E+VHSI++REVIVRS+RGLT
Sbjct: 720  TLVEDVASLYHNKYSFNMEYPSAEYGLVQSCFFHGLDPYEEIVHSIATREVIVRSSRGLT 779

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASE-FCAGDPVGVLAA 2647
            EPGTLFKNLMAILRDVVICYDGTVRN CSNS+IQFEYGVNS +     F AG+PVGVLAA
Sbjct: 780  EPGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNSGSRPPNLFPAGEPVGVLAA 839

Query: 2648 TAMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQE 2827
            TAMSNPAYKAVLD        WE+MKEILLC VNFKN+  DRRVILYL+NC CGR  C+E
Sbjct: 840  TAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLSNCGCGRTFCRE 899

Query: 2828 NAALIVKNHLKKVSLKDTAIEFLIEYRSQMM---HEEGNPGPVGHIHLNKTLLIQSNISM 2998
             AA +VKN LKKVSLKDTA+EF+IEY +Q+          G VGHIHLN+ LL + N+ +
Sbjct: 900  RAACLVKNQLKKVSLKDTAVEFMIEYSNQLSSLGSMVNEAGLVGHIHLNEELLRELNVGV 959

Query: 2999 HDILEKCQDAIN------IQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFC 3160
             +I +KCQ+ +N      + +KK  +  LFKN  L                +D PC+ F 
Sbjct: 960  DEIQQKCQETVNSFRRKRVGKKKFNIGYLFKNTVLFASEHCSFHHSCADKRSDSPCLMFF 1019

Query: 3161 WREAKIDNLEKASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKG 3340
             +    + LE  S    D +CPVL +TIIKGDPR+S+ANI+WI PD  +WIRSP+K  KG
Sbjct: 1020 LQAT--EELETTSQYYADLICPVLLETIIKGDPRISSANIIWIDPDTTTWIRSPNKSQKG 1077

Query: 3341 ELALDIILEKEAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQA 3520
            E ALD++LEK  VK+SGDAWR+++D CLP++HL+DT+RSIPYAIKQ+ ELLG+SCAF+QA
Sbjct: 1078 EWALDVVLEKSVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLGVSCAFDQA 1137

Query: 3521 VQRLSTSVTMVTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLF 3700
            VQRL+T+VTMV KGVLK+HL+LLANSMTC+G F+GFN+ G K+LSR+L +QVPF  ATLF
Sbjct: 1138 VQRLATAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQVPFTEATLF 1197

Query: 3701 TPRKCFERAAEKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYN 3880
            TPRKCFERAAEKCH+D+LSSIVASC+WGKHV VGTGS F+ILW+T +  L     +D +N
Sbjct: 1198 TPRKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFDILWDTREGGLNQEGGLDVFN 1257

Query: 3881 FLHMVNSRSKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNG 4060
            FLHMV S +  E+  T  LGAE+DDL   ++  +  LSP  +SGL++  FED +EF    
Sbjct: 1258 FLHMV-STANGEEATTGALGAEVDDLMVVDELADSCLSPELDSGLDRPVFEDIIEFEDKS 1316

Query: 4061 DDKDGFSKQDANEPDSWGKKVNSEE--NDWMKIGEQSTYAEENQDNSAWG--KKVDSDGG 4228
            +   G S  + N+   WG     E+  + W K     T A E    + WG  K  +    
Sbjct: 1317 ETPPGKSSWE-NDSSVWGTNSTREDATSSWGK-----TPARE-ATTTTWGIDKAAEDTTP 1369

Query: 4229 GWA-----KKPEQSWGKKAEETQDNSAWGKKVDSDGGGW----AKKPEQSSWG--KKAEE 4375
             W      +    +WGK  E         K  ++D   W    AK+P  SSWG  K AE+
Sbjct: 1370 AWGTNTAREDATSAWGKTREHITSAGGADKTSENDTSSWGKTLAKEPAASSWGIAKAAED 1429

Query: 4376 T------------------QDNSAWG--KKVDSDGGGWAKKPEQ----SSWG--KKAEET 4477
            T                     SAWG  K   +D   W K P +    S+WG  K AE+T
Sbjct: 1430 TPPAWGTNTAREDAAKTGEPPTSAWGASKVSQNDTPSWGKTPAKETSTSTWGIDKAAEDT 1489

Query: 4478 QSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNSTWGRDTSKIEDISS-----ARSQEDG 4642
              +  WG  T   A ++   +WG    S+    S WG D     D SS     AR     
Sbjct: 1490 --TPVWGTST---AREDATPAWGK---SREKTASAWGTDKESDNDTSSWGKNPARKPTTS 1541

Query: 4643 SWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSKENLWEAKQADQATQSSNVWGSSSDWGK 4822
            +W     A+ D++ A G S       P    S+EN   A   D+ +++       S WGK
Sbjct: 1542 TWGIDKAAE-DTTPAWGTSTAREDATPAWGKSRENTASAWGTDKESENDR-----SSWGK 1595

Query: 4823 FDSQSPTGEKKMSQWGSSQKQSLGSNVDSPDVSGSKENLWEAKQADQAT--QSSNIWG-- 4990
              ++ PT     S WG+ +        D+   SG+     +A      T   +++ WG  
Sbjct: 1596 TPARKPTN----STWGTEKAAE-----DTTPTSGTNTAREDATSTWGKTGEHTTSTWGTD 1646

Query: 4991 --SSSEW 5005
              S ++W
Sbjct: 1647 KASENDW 1653


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score = 1724 bits (4465), Expect = 0.0
 Identities = 921/1649 (55%), Positives = 1144/1649 (69%), Gaps = 29/1649 (1%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME++S  +T + +I GI F LAT +EI  AS+S  PI+H SQLSN +LGLPLE GKC +C
Sbjct: 1    MEENSSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNAC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXF-ERVM 499
            GT E G+CEGHFGYIELP PIYHP H+SE                           +R++
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLL 120

Query: 500  -SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 676
             SC E   Q+SI E KTTDGA  LELK PSR       W FLEKYGFRYG+ +N+R LLP
Sbjct: 121  ASCCENAPQVSIKEVKTTDGACSLELKQPSRQARTS--WEFLEKYGFRYGDHHNTRTLLP 178

Query: 677  SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 856
             EVM ILK++P ETR+KLS KG+FPQ+GYI+++LPVPPNCLSVPD+SDG+S MS+D S  
Sbjct: 179  CEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTA 238

Query: 857  XXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 1036
                         +SRSG PNFESHE+EAN+LQ+AV  YLQ RGT KASR++D R+G++K
Sbjct: 239  MLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISK 298

Query: 1037 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 1216
            + + SSTKAWLEKM+TLFIRKGSGFSSR VITGDP+K V+EIG+P EIAQ+ITFEERVN 
Sbjct: 299  DASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNM 358

Query: 1217 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 1396
            HNM +LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPT
Sbjct: 359  HNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 418

Query: 1397 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 1576
            THKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV ELFSVEK
Sbjct: 419  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEK 478

Query: 1577 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNS-GP 1753
            QLLSSH GN NLQLATDSLLSL+++ +     +A AQQL+MF+ + L +P+ +K NS GP
Sbjct: 479  QLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGP 538

Query: 1754 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 1933
             WTA QILQ + P   DCSG+R+ IS S++L++DF+RD+M S++N++VTS+FF KGPKEV
Sbjct: 539  CWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEV 598

Query: 1934 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2113
            L FF+S+Q LLME++++EGFSVSL DF + R+V+++IQ++IQ ISPLLY LRS+Y+E + 
Sbjct: 599  LNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVG 658

Query: 2114 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 2293
            LQ+++++R  K PV NFIL SS +G LIDSKS+S ++KVVQQIGFLG+QLS++GKFYS  
Sbjct: 659  LQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKT 718

Query: 2294 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
            LV+D++  FQ  YPS   DYP+ EFGL+    F GLDPY+ MVHSIS+REVIVRS+RGL+
Sbjct: 719  LVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLS 778

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 2650
            EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+N A    +F AG+PVGVLAAT
Sbjct: 779  EPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAAT 837

Query: 2651 AMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 2830
            AMSNPAYKAVLD        WE+MKEILLC V+ KND  DRRVILYL +CDCGRK+CQEN
Sbjct: 838  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQEN 897

Query: 2831 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 3010
            AA +VKNHL+KV LKDTA+E + EY+ Q    E   G VGHI LNK +L + NISM ++ 
Sbjct: 898  AAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLVGHILLNKAVLKELNISMQEVH 957

Query: 3011 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLE 3190
             KCQ+ I   +KKKK A+ FK  DL               W D+ C+ F  R  K D+L+
Sbjct: 958  MKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLD 1017

Query: 3191 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 3370
                 L D + PVL +T+IKGDPR+ +ANI+W+SPD  +WIRSPSK  KGELALD++LEK
Sbjct: 1018 CTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDVVLEK 1077

Query: 3371 EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 3550
             AVK++GDAWR ++DCCLP+I+L+DTQRSIPYAIKQV ELLGISCAFEQAVQRLSTSV+M
Sbjct: 1078 SAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSM 1137

Query: 3551 VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 3730
            V +GVLK+HL+LLANSMTC+G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCFERAA
Sbjct: 1138 VARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAA 1197

Query: 3731 EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSK 3910
            EKCHVD+LSSIVASC+WGKHV VGTGS F++LW+  +        +D YNFLHM++S S 
Sbjct: 1198 EKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLSSASG 1257

Query: 3911 PEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQD 4090
            P    T+CLG E+DDL   ++  E+ LSP   +GL+K  FED  +F  + D +   S   
Sbjct: 1258 PSST-TTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAES--- 1313

Query: 4091 ANEPDSWGKKVNSEE-NDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGWA----KKPEQS 4255
                 SW K V+ ++ + W               +SAW KK + DG  +A       +QS
Sbjct: 1314 -----SWEKGVSLDKVSSW-------------NVSSAWNKKAE-DGDKFAAALTSTTKQS 1354

Query: 4256 ----WGKKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEETQDNSAWGKKVDSDGG 4423
                WG    +TQD +A             KK E   WG    +TQ+       V +   
Sbjct: 1355 DWCDWGTSKSKTQDAAAAATST-------TKKTEWCDWGTSKSKTQE-------VAATVT 1400

Query: 4424 GWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNST------- 4582
            G A++ E   W     + Q  +A    T       KQ+ WG+  TSK+            
Sbjct: 1401 GTAEQNEWCDWRTSKSKIQVVAAAVTST------TKQSEWGDWGTSKSKTQDVAAAVTGT 1454

Query: 4583 -------WGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSK 4741
                   WG+  SK +D+S    + DG+        N+ +K + W L  N D  DVS  +
Sbjct: 1455 METEWGDWGKGKSKTQDVS---PKVDGT------CVNEQTKLSDWGLKKN-DTQDVS-ME 1503

Query: 4742 ENLWEAKQADQATQSSNVWGSSSDWGKFDSQSPTGEKKM--SQWGSSQKQSLGSNVDSPD 4915
            E  +++  AD  T     WG+    GK +S+ P     +  S WG+       +  DS  
Sbjct: 1504 EKTFKSNGADTGTS----WGT---MGK-ESEKPDANDALPWSGWGTQDVIPTKTLDDS-- 1553

Query: 4916 VSGSKENLWEAKQADQATQSSNIWGSSSE 5002
               SK + WE +++ + +Q    WGS  E
Sbjct: 1554 ---SKSSGWEQQKSPECSQG---WGSLDE 1576


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score = 1724 bits (4465), Expect = 0.0
 Identities = 921/1649 (55%), Positives = 1144/1649 (69%), Gaps = 29/1649 (1%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME++S  +T + +I GI F LAT +EI  AS+S  PI+H SQLSN +LGLPLE GKC +C
Sbjct: 1    MEENSSASTVDGEIVGIGFCLATPREIFTASISGFPINHVSQLSNSYLGLPLEFGKCNAC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXF-ERVM 499
            GT E G+CEGHFGYIELP PIYHP H+SE                           +R++
Sbjct: 61   GTSEPGKCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLRMKNKFQIKSGSISDRLL 120

Query: 500  -SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 676
             SC E   Q+SI E KTTDGA  LELK PSR       W FLEKYGFRYG+ +N+R LLP
Sbjct: 121  ASCCENAPQVSIKEVKTTDGACSLELKQPSRQARTS--WEFLEKYGFRYGDHHNTRTLLP 178

Query: 677  SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 856
             EVM ILK++P ETR+KLS KG+FPQ+GYI+++LPVPPNCLSVPD+SDG+S MS+D S  
Sbjct: 179  CEVMEILKRIPAETRRKLSGKGFFPQEGYILRYLPVPPNCLSVPDISDGVSIMSSDLSTA 238

Query: 857  XXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 1036
                         +SRSG PNFESHE+EAN+LQ+AV  YLQ RGT KASR++D R+G++K
Sbjct: 239  MLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNIDARYGISK 298

Query: 1037 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 1216
            + + SSTKAWLEKM+TLFIRKGSGFSSR VITGDP+K V+EIG+P EIAQ+ITFEERVN 
Sbjct: 299  DASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERVNM 358

Query: 1217 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 1396
            HNM +LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPT
Sbjct: 359  HNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 418

Query: 1397 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 1576
            THKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV ELFSVEK
Sbjct: 419  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFSVEK 478

Query: 1577 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNS-GP 1753
            QLLSSH GN NLQLATDSLLSL+++ +     +A AQQL+MF+ + L +P+ +K NS GP
Sbjct: 479  QLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAFLKGNSFGP 538

Query: 1754 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 1933
             WTA QILQ + P   DCSG+R+ IS S++L++DF+RD+M S++N++VTS+FF KGPKEV
Sbjct: 539  CWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIFFEKGPKEV 598

Query: 1934 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2113
            L FF+S+Q LLME++++EGFSVSL DF + R+V+++IQ++IQ ISPLLY LRS+Y+E + 
Sbjct: 599  LNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLRSTYNELVG 658

Query: 2114 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 2293
            LQ+++++R  K PV NFIL SS +G LIDSKS+S ++KVVQQIGFLG+QLS++GKFYS  
Sbjct: 659  LQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSNKGKFYSKT 718

Query: 2294 LVKDMSSMFQKRYPSCD-DYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
            LV+D++  FQ  YPS   DYP+ EFGL+    F GLDPY+ MVHSIS+REVIVRS+RGL+
Sbjct: 719  LVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVIVRSSRGLS 778

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 2650
            EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+N A    +F AG+PVGVLAAT
Sbjct: 779  EPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLN-ARTKPQFPAGEPVGVLAAT 837

Query: 2651 AMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 2830
            AMSNPAYKAVLD        WE+MKEILLC V+ KND  DRRVILYL +CDCGRK+CQEN
Sbjct: 838  AMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDCGRKYCQEN 897

Query: 2831 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 3010
            AA +VKNHL+KV LKDTA+E + EY+ Q    E   G VGHI LNK +L + NISM ++ 
Sbjct: 898  AAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSESEAGLVGHILLNKAVLKELNISMQEVH 957

Query: 3011 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLE 3190
             KCQ+ I   +KKKK A+ FK  DL               W D+ C+ F  R  K D+L+
Sbjct: 958  MKCQETIISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSCLMFFCRNTKDDHLD 1017

Query: 3191 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 3370
                 L D + PVL +T+IKGDPR+ +ANI+W+SPD  +WIRSPSK  KGELALD++LEK
Sbjct: 1018 CTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPSKTQKGELALDVVLEK 1077

Query: 3371 EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 3550
             AVK++GDAWR ++DCCLP+I+L+DTQRSIPYAIKQV ELLGISCAFEQAVQRLSTSV+M
Sbjct: 1078 SAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISCAFEQAVQRLSTSVSM 1137

Query: 3551 VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 3730
            V +GVLK+HL+LLANSMTC+G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCFERAA
Sbjct: 1138 VARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFSEATLFTPRKCFERAA 1197

Query: 3731 EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSK 3910
            EKCHVD+LSSIVASC+WGKHV VGTGS F++LW+  +        +D YNFLHM++S S 
Sbjct: 1198 EKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSGIDVYNFLHMLSSASG 1257

Query: 3911 PEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQD 4090
            P    T+CLG E+DDL   ++  E+ LSP   +GL+K  FED  +F  + D +   S   
Sbjct: 1258 PSST-TTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAADFENDLDFQPAES--- 1313

Query: 4091 ANEPDSWGKKVNSEE-NDWMKIGEQSTYAEENQDNSAWGKKVDSDGGGWA----KKPEQS 4255
                 SW K V+ ++ + W               +SAW KK + DG  +A       +QS
Sbjct: 1314 -----SWEKGVSLDKVSSW-------------NVSSAWNKKAE-DGDKFAAALTSTTKQS 1354

Query: 4256 ----WGKKAEETQDNSAWGKKVDSDGGGWAKKPEQSSWGKKAEETQDNSAWGKKVDSDGG 4423
                WG    +TQD +A             KK E   WG    +TQ+       V +   
Sbjct: 1355 DWCDWGTSKSKTQDAAAAATST-------TKKTEWCDWGTSKSKTQE-------VAATVT 1400

Query: 4424 GWAKKPEQSSWGKKAEETQSSSAWGQKTLVNAGDNKQNSWGNVSTSKTDNNST------- 4582
            G A++ E   W     + Q  +A    T       KQ+ WG+  TSK+            
Sbjct: 1401 GTAEQNEWCDWRTSKSKIQVVAAAVTST------TKQSEWGDWGTSKSKTQDVAAAVTGT 1454

Query: 4583 -------WGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSLGSNVDNPDVSGSK 4741
                   WG+  SK +D+S    + DG+        N+ +K + W L  N D  DVS  +
Sbjct: 1455 METEWGDWGKGKSKTQDVS---PKVDGT------CVNEQTKLSDWGLKKN-DTQDVS-ME 1503

Query: 4742 ENLWEAKQADQATQSSNVWGSSSDWGKFDSQSPTGEKKM--SQWGSSQKQSLGSNVDSPD 4915
            E  +++  AD  T     WG+    GK +S+ P     +  S WG+       +  DS  
Sbjct: 1504 EKTFKSNGADTGTS----WGT---MGK-ESEKPDANDALPWSGWGTQDVIPTKTLDDS-- 1553

Query: 4916 VSGSKENLWEAKQADQATQSSNIWGSSSE 5002
               SK + WE +++ + +Q    WGS  E
Sbjct: 1554 ---SKSSGWEQQKSPECSQG---WGSLDE 1576


>ref|XP_015570848.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Ricinus communis]
          Length = 1972

 Score = 1716 bits (4445), Expect = 0.0
 Identities = 916/1677 (54%), Positives = 1159/1677 (69%), Gaps = 50/1677 (2%)
 Frame = +2

Query: 140  EMEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCES 319
            E ++++  +  E ++ GI+FGLAT +EI  ASVSDCPISH+SQL+NPFLGLPLE GKCES
Sbjct: 2    EDKENTQSSFLEGEVVGIKFGLATYKEISAASVSDCPISHSSQLTNPFLGLPLEFGKCES 61

Query: 320  CGTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXFERVM 499
            CGT E G+CEGHFGYIELP PIYHP HVSE                          ER+ 
Sbjct: 62   CGTSEPGKCEGHFGYIELPIPIYHPSHVSELKRMLSLLCLKCLKLKTNKIKSSGVAERLF 121

Query: 500  SCHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLPS 679
            SC EE +QISI E KTTDGAY L+LK+PSR RL +GFWNFLE+YGFRYG+   +R LLP 
Sbjct: 122  SCCEEAAQISIKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDI-TRTLLPC 180

Query: 680  EVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSITX 859
            EV+ +L+++PQ+TRKKL+ KGYFPQDGYI++++PVPPNCLSVPD+SDG+S MS+D SI+ 
Sbjct: 181  EVLEMLRRIPQDTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSISM 240

Query: 860  XXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNKE 1039
                        +SRSG PNFESHE+EA +LQ+AV  YLQ RGT K++RDV  RFGV+KE
Sbjct: 241  LKKVLKQVEIIKSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVHKE 300

Query: 1040 INASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQH 1219
             N SSTKAWLEKM+TLFIRKGSGFSSRSVITGD +K V+EIG+P EIAQ+ITFEERVN H
Sbjct: 301  SNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKCVNEIGIPSEIAQRITFEERVNAH 360

Query: 1220 NMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPTT 1399
            NM++LQ+LVD+KLCLTYRDG STYSLREGSKGHTFLR GQ+VHRRIMDGD+VFINRPPTT
Sbjct: 361  NMQYLQELVDNKLCLTYRDGSSTYSLREGSKGHTFLRLGQIVHRRIMDGDMVFINRPPTT 420

Query: 1400 HKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEKQ 1579
            HKHSLQALSVY+HD HTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV+ELFSVEKQ
Sbjct: 421  HKHSLQALSVYVHDGHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVLELFSVEKQ 480

Query: 1580 LLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFV-PNMLSRPSVIKSN-SGP 1753
            LLSSH+GN NLQL +DSLLSLK +F  YFL RAAAQQLAMFV  + L +P++ K++ S P
Sbjct: 481  LLSSHSGNLNLQLTSDSLLSLKTMFNTYFLDRAAAQQLAMFVSSSSLPQPALWKAHCSVP 540

Query: 1754 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 1933
            +WTA QILQ +LP  FDCSGER+ ISN++++ +DF+RDV+ +++NDIV S+FF KGP  V
Sbjct: 541  IWTALQILQTALPSQFDCSGERYLISNTDIVKVDFSRDVVQAVINDIVISMFFEKGPDAV 600

Query: 1934 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2113
             +FFNS+Q LLMESL+SEGFSV L DF++ R  +   + + + IS LL  LRS+Y+E +A
Sbjct: 601  FKFFNSLQPLLMESLFSEGFSVGLEDFYISRAAIGGTRRDFKVISSLLSQLRSTYNELMA 660

Query: 2114 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 2293
            LQL++++R  K+PV +FI++ S IG LID KS+SA++KVVQQIGFLG+Q+SDRGKFY+  
Sbjct: 661  LQLENHIRRAKLPVADFIVRLSSIGDLIDYKSDSAMTKVVQQIGFLGLQISDRGKFYTKT 720

Query: 2294 LVKDMSSMFQKRYPSCDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLTE 2473
            LV+DM+  F+ +YPS  DYP+ + GL+    F GLDPY+EMVHSIS+REV+VRSTRGL+E
Sbjct: 721  LVEDMALHFESKYPSDIDYPSAKHGLIQSCFFHGLDPYEEMVHSISAREVMVRSTRGLSE 780

Query: 2474 PGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSA-NIASEFCAGDPVGVLAAT 2650
            PGTLFKNLMAILRDVVICYDGTVRN CSNSIIQFEYG+ +     S F AG+PVGVLAAT
Sbjct: 781  PGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGMKAGIKAQSLFPAGEPVGVLAAT 840

Query: 2651 AMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 2830
            AMSNPAYKAVLD        WE+MKEIL C VNFKND +DRRVILY N C CG+ +CQE 
Sbjct: 841  AMSNPAYKAVLDSTPSSNSSWELMKEILQCRVNFKNDITDRRVILYFNYCGCGKFYCQER 900

Query: 2831 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 3010
             A  VKNHL+KV LKD A+ F+ EY+SQ    +   G VGH+HL KT L + N+SM  I 
Sbjct: 901  LAYSVKNHLEKVILKDIALCFMCEYKSQPTIADA--GLVGHVHLKKTKLQELNVSMEVIH 958

Query: 3011 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLE 3190
             KC + I+   KKKK+ NLFK I++                + +PC+ F W++    +LE
Sbjct: 959  RKCSETISSFGKKKKMGNLFKKIEVSFSECCSFQCADDR--SGMPCLMFFWQDITDIHLE 1016

Query: 3191 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 3370
            +++H+  D +CPVL  TIIKGD RVS+ANIVWISPD  +WIR+PS+  KGELALD+++ K
Sbjct: 1017 RSTHIFADVICPVLLDTIIKGDHRVSSANIVWISPDTTTWIRNPSRTQKGELALDVVIGK 1076

Query: 3371 EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 3550
             AVK+SGDAWRV++D C+P++H++DT RSIPYAIKQV ELLG+SCAF+QAVQRLS+SVT 
Sbjct: 1077 SAVKQSGDAWRVVLDSCIPVLHMIDTTRSIPYAIKQVQELLGVSCAFDQAVQRLSSSVTK 1136

Query: 3551 VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 3730
            V KGVLK+HL+LLANSMTC+G  +GF +GG KSL+ SL VQVPF  ATLFTPRKCFERAA
Sbjct: 1137 VAKGVLKEHLILLANSMTCTGNLVGFTSGGYKSLTHSLDVQVPFTEATLFTPRKCFERAA 1196

Query: 3731 EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWNTGKAELRPNKEVDAYNFLHMVNSRSK 3910
            EKCH+D LSS+VASC+WGKHV VGTGS F++LW+  +A L     ++ Y FL+MV S   
Sbjct: 1197 EKCHIDTLSSVVASCSWGKHVAVGTGSHFDVLWDQKEACLNQEGTINVYEFLNMVRSSKY 1256

Query: 3911 PEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSKQD 4090
             E+  ++CLGAE+DDL  ++   +++LSP +    +K  FED  EF      K+    + 
Sbjct: 1257 GEESASACLGAEVDDLMLDDGVDDWNLSPEQ---TDKPVFEDRDEF------KNFLDNES 1307

Query: 4091 ANEPDSWGKKVNSEENDWMKIG----EQSTYAEENQDNSAWGK---KVDSDGGGWAKKPE 4249
            A    +W +KV+  EN     G    ++     E +  S+WG+   K  +      ++P+
Sbjct: 1308 AEV--NW-EKVSHIENGVSGNGNWGLDKDVGTAEEESWSSWGRSTAKTQNSLSTKTQEPD 1364

Query: 4250 QS--W--GKKAEETQDNSAWGK-KVDSDGGGWAKKPE------QSSWGKK----AEETQD 4384
            +S  W   K+  E   +  WGK ++     GW    E         WG        ET+ 
Sbjct: 1365 RSGVWDTAKEHVEVAGSQGWGKPRIAEVSHGWGSSEEHIEAASSHGWGLSNVGGRGETEK 1424

Query: 4385 NSAWGK-KVDSDGGGWAKKPEQSSWGKKAE--ETQSSSAWGQKTLVNAGDNKQNSWGNVS 4555
               WG+ K      GW    +  +WG   E  E  SS  WG   L NAG + +N      
Sbjct: 1425 EQPWGQPKSPQVSHGWGSAKDSVNWGSSKEHVEAPSSQGWG---LSNAGGSSEN------ 1475

Query: 4556 TSKTDNNSTWGRDTSKIEDISSARSQEDGSWSSASGAQNDSSKAAGWSL----GSNVDNP 4723
                +    W +  S     S   S++  +WSS      +++ + GW L    GS+ +  
Sbjct: 1476 ----EKEQQWDKPKSPQVSHSWGSSKDSVNWSSCK-EHIEAAGSQGWGLSNAGGSSENEK 1530

Query: 4724 DVSGSKENLWEAKQADQATQSSNVWGSSSD---------WGKFDSQSPTGEKKMSQWGSS 4876
            +    K    +  Q+  + + S  WGSS +         WG  +++  +  +K  QWG  
Sbjct: 1531 EQQRGKPKSPQVSQSWGSVKDSMNWGSSKEYVVAPSSQGWGLSNAEGSSENEKEQQWGKP 1590

Query: 4877 Q----KQSLGSNVDSPDVSGSKENLWEAKQADQATQSSNIWGSSS-----EWGKFDS 5020
            +      S  S  DS + S SKE++  A    Q    SN  GSS      +WG   S
Sbjct: 1591 KSPQVSHSWASAKDSVNWSSSKEHVEAA--GSQGWGPSNARGSSENENQLQWGSAKS 1645


>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score = 1707 bits (4420), Expect = 0.0
 Identities = 926/1735 (53%), Positives = 1175/1735 (67%), Gaps = 105/1735 (6%)
 Frame = +2

Query: 143  MEDSSLPTTFEAKIKGIRFGLATRQEICKASVSDCPISHASQLSNPFLGLPLETGKCESC 322
            ME++S     + +I GI+F LAT +EI  ASVS  PI+H SQLSN +LGLPLE GKC +C
Sbjct: 1    MEENSSSVILDGEIVGIKFCLATPKEILTASVSGFPINHVSQLSNSYLGLPLEFGKCSAC 60

Query: 323  GTGEAGQCEGHFGYIELPTPIYHPDHVSEXXXXXXXXXXXXXXXXXXXXXXXXXF-ERVM 499
            GT E GQCEGHFGYIELP PIYHP H+SE                           ER++
Sbjct: 61   GTSEPGQCEGHFGYIELPIPIYHPSHISELKRLLSLLCLKCLKLKNKFQMKSGSVAERLL 120

Query: 500  S-CHEEVSQISINEAKTTDGAYYLELKVPSRSRLEEGFWNFLEKYGFRYGNMYNSRPLLP 676
            S C E   Q+SI E KTTDGA YLELK PSR       WNFLE+YGFRYG+ +++R LLP
Sbjct: 121  SSCCENTPQVSIKEVKTTDGACYLELKQPSRQSKTN--WNFLERYGFRYGD-HHTRTLLP 177

Query: 677  SEVMAILKKVPQETRKKLSAKGYFPQDGYIIQHLPVPPNCLSVPDVSDGISTMSTDYSIT 856
             EV+ ILK++P +TR+KLS KG+FPQ+GYI+Q+LPVPPNCLSVPDVSDG+S MS+D S +
Sbjct: 178  CEVVEILKRIPSQTRRKLSGKGFFPQEGYILQYLPVPPNCLSVPDVSDGVSVMSSDLSTS 237

Query: 857  XXXXXXXXXXXXXNSRSGMPNFESHEIEANELQAAVAHYLQFRGTGKASRDVDTRFGVNK 1036
                         +SRSG PNFESHE+EAN+LQ+AV  YLQ RGT KASR +D R+GVNK
Sbjct: 238  MLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGVNK 297

Query: 1037 EINASSTKAWLEKMKTLFIRKGSGFSSRSVITGDPFKGVSEIGLPFEIAQKITFEERVNQ 1216
            + + SSTKAWLEKM+TLFIRKGSGFSSRSVITGDP+K V+EIG+P EIAQ+ITFEERVN 
Sbjct: 298  DASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERVNM 357

Query: 1217 HNMEFLQKLVDDKLCLTYRDGQSTYSLREGSKGHTFLRHGQVVHRRIMDGDIVFINRPPT 1396
            HNM +LQ LVD+KLCLTYRDG STYSLREGSKGHTFLR GQVVHRRIMDGDIVFINRPPT
Sbjct: 358  HNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT 417

Query: 1397 THKHSLQALSVYIHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLEAKAEVVELFSVEK 1576
            THKHSLQALSVY+HDDHTVKINPLICGPLSADFDGDCIHLFYPQSL AKAEV ELFSVEK
Sbjct: 418  THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSVEK 477

Query: 1577 QLLSSHTGNFNLQLATDSLLSLKILFRKYFLSRAAAQQLAMFVPNMLSRPSVIKSNS-GP 1753
            QLLSSH+GN NLQLATDSLLSL+++ + +   +A AQQL+MF+ + L  P+ +K N   P
Sbjct: 478  QLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHVAP 537

Query: 1754 LWTASQILQMSLPPSFDCSGERHTISNSEVLSLDFNRDVMASIVNDIVTSLFFLKGPKEV 1933
             WTA QILQ + P   DCS +R+ I  S++L +DFN+D+M S++N++V S+F+ KGPKEV
Sbjct: 538  CWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPKEV 597

Query: 1934 LRFFNSIQSLLMESLYSEGFSVSLRDFFLPRDVLESIQENIQKISPLLYHLRSSYSESIA 2113
            L FF+S+Q LLME++++EGF+V L DF + R+V+E+IQ++IQ ISPLLY LRS+Y+E + 
Sbjct: 598  LNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNELVE 657

Query: 2114 LQLDSYLRSVKIPVTNFILKSSRIGHLIDSKSESALSKVVQQIGFLGMQLSDRGKFYSAI 2293
            LQ+++++R  K P+ +FILK+S +G+LIDS+S+SA++KVVQQIGFLGMQLSD+GKFYS  
Sbjct: 658  LQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYSKT 717

Query: 2294 LVKDMSSMFQKRYPS-CDDYPAEEFGLVGRTLFRGLDPYQEMVHSISSREVIVRSTRGLT 2470
            LV+D++  FQ  YPS   DYP+ EFGL+    FRGLDPY+ +VHSIS+REV+VRSTRGL+
Sbjct: 718  LVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRGLS 777

Query: 2471 EPGTLFKNLMAILRDVVICYDGTVRNTCSNSIIQFEYGVNSANIASEFCAGDPVGVLAAT 2650
            EPGTLFKNLMAILRDVVICYDGTVRN  SNSIIQF+YG+ SA    +F AG+PVGVLAAT
Sbjct: 778  EPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGL-SARTRPQFPAGEPVGVLAAT 836

Query: 2651 AMSNPAYKAVLDXXXXXXXXWEMMKEILLCGVNFKNDTSDRRVILYLNNCDCGRKHCQEN 2830
            AMSNPAYKAVLD        WE+MKEILLC V+FKND  DRRVILYL +CDCGRK+CQEN
Sbjct: 837  AMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQEN 896

Query: 2831 AALIVKNHLKKVSLKDTAIEFLIEYRSQMMHEEGNPGPVGHIHLNKTLLIQSNISMHDIL 3010
            AA +VKNHL++V LKD A++F+IEY+ Q +  E   G VGHI LNK LL + ++S+ +I 
Sbjct: 897  AAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSEIEAGLVGHILLNKDLLKELSVSVQEIH 956

Query: 3011 EKCQDAINIQQKKKKVANLFKNIDLXXXXXXXXXXXXXXXWTDVPCIQFCWREAKIDNLE 3190
             KCQ+ IN  +KKKK A  FK  DL               W D+PC+ F +R    DNL+
Sbjct: 957  MKCQETINSFRKKKKTAETFKRTDLFVSESCSIQQSCVDKWLDMPCLMFFFRNTNDDNLD 1016

Query: 3191 KASHLLDDTVCPVLFQTIIKGDPRVSTANIVWISPDRASWIRSPSKGPKGELALDIILEK 3370
             A  +L D + PVL QT+IKGDPR+ +A I+W++PD  +WIR+PSK  KGELAL+++LEK
Sbjct: 1017 SAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGELALEVVLEK 1076

Query: 3371 EAVKKSGDAWRVLMDCCLPIIHLVDTQRSIPYAIKQVDELLGISCAFEQAVQRLSTSVTM 3550
             AVK++GDAWR ++DCCLP+++++DT RSIPYAIKQV++LLGISCAFEQAVQRLSTSV+M
Sbjct: 1077 SAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAVQRLSTSVSM 1136

Query: 3551 VTKGVLKDHLLLLANSMTCSGTFIGFNTGGIKSLSRSLGVQVPFMNATLFTPRKCFERAA 3730
            VT+GVLK+HL+LLANSMTC G  IGFN+GG K+LSRSL +QVPF  ATLFTPRKCFERAA
Sbjct: 1137 VTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFTPRKCFERAA 1196

Query: 3731 EKCHVDNLSSIVASCAWGKHVTVGTGSPFEILWN--TGKAELRPNKEVDAYNFLHMVNSR 3904
            EKC+ D+LSSIVASC+WGK V VGTGS F++LWN  +G  ++     +D YNFLHMV S 
Sbjct: 1197 EKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQESGSDQM---SGMDVYNFLHMV-SG 1252

Query: 3905 SKPEDMGTSCLGAEIDDLDQENDFMEFDLSPVRESGLEKLTFEDGVEFGLNGDDKDGFSK 4084
            +   +  T+CLG E+DDL       E+ LSP   +GL+K  FED  EF  N D +   + 
Sbjct: 1253 AGGSNSNTACLGEEVDDL-----MDEWCLSPDHSTGLDKPVFEDAAEFENNLDGQSASAN 1307

Query: 4085 QDANEP---------DSWGKKVNSEENDWMKIGEQSTYAEENQDNSAWG--KKVDSDGG- 4228
             + +           D+ G   N+E+ D  K    +T +E+  + S WG  K    D G 
Sbjct: 1308 WEKDVSLDKVSDVGWDASGWNKNAEDVD--KFAAAATSSEKQNEWSGWGASKSNSQDVGW 1365

Query: 4229 ----GWAKKPE------------------QSWGKKAEETQD------------NSAWGKK 4306
                GW K  E                    WG    ++QD             SAW K 
Sbjct: 1366 DALSGWNKNAEDGDKFAAAATSSKKQNECSDWGASKSKSQDVVSPKVDVGWDALSAWHKN 1425

Query: 4307 VDSDGGGWA-------KKPEQSSWGKKAEETQDNS----AWGKKVDSDGGGW-------- 4429
             + DG  +A       K+ E S WG    ++QD S        K  ++  GW        
Sbjct: 1426 AE-DGDNFAAAASSSKKQSEWSDWGMSKSKSQDVSPKTDGTCMKEQTELSGWEMKKFDTR 1484

Query: 4430 --------AKKP----EQSSWG---KKAEETQSSSA-----WGQKTLVNAGDNKQNSWGN 4549
                    A KP      +SWG   K++EE  +S+A     WG K        K++    
Sbjct: 1485 DVLPVEERASKPNGWDSGASWGIMSKESEELDASAAAPWSGWGTKD----SSPKKSLDKT 1540

Query: 4550 VSTSKTDNNSTWGRDTSKI-------EDISSARSQEDGSWSSASGAQNDSSKAAGWSLGS 4708
              +S  D  S+WGR T+ +        D    + + +  W + +        A+GW   +
Sbjct: 1541 SKSSSWDTVSSWGRKTAAVHESGFIGNDNQPGQGRIENEWDNKASQVKPVQSASGW---N 1597

Query: 4709 NVDNPDVSGSKENLWEAKQA-DQATQSSNVWGSSSDWGKFDSQSPT-GEKKMSQWGSSQK 4882
            N    ++     + W+ K + ++  QS + W SSS  G    +SPT G  K S W   + 
Sbjct: 1598 NKVTEEMVVQSTSSWDEKASWEKPVQSMSGWVSSSAAG--SDESPTKGCSKNSNWDQQKA 1655

Query: 4883 QSLGSNVDSPDVSGSKENLWEAKQADQATQSSNIWG-----SSSEWGKFDSQSPT 5032
            Q++ +N      S +  + W+ +++  A   +N W      ++S W +   +SPT
Sbjct: 1656 QTM-NNAWDQQKSPATNSSWDRQKSSTA---NNSWDQQKPPANSSWDQ--EKSPT 1704