BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00000902
         (4296 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004935698.1| RNA polymerase alpha subunit (chloroplast) [...   601   0.0  
gb|ALO62155.1| RNA polymerase alpha subunit (chloroplast) [Cresc...   600   0.0  
gb|AKZ23818.1| RNA polymerase alpha subunit (plastid) [Verbena h...   600   0.0  
ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [...   598   0.0  
ref|YP_009117253.1| RNA polymerase alpha subunit (chloroplast) [...   597   0.0  
ref|YP_008815969.1| RNA polymerase alpha subunit (chloroplast) [...   597   0.0  
gb|ADD31211.1| RNA polymerase alpha subunit protein (chloroplast...   594   0.0  
ref|YP_003359390.1| RNA polymerase alpha subunit (chloroplast) [...   593   0.0  
ref|YP_008964066.1| RNA polymerase subunit alpha [Ajuga reptans]...   592   0.0  
gb|AMQ33771.1| RNA polymerase alpha subunit (chloroplast) [Stach...   591   0.0  
ref|YP_009110633.1| RNA polymerase alpha subunit (chloroplast) [...   590   0.0  
gb|AKZ23819.1| RNA polymerase alpha subunit (plastid) [Teucrium ...   591   0.0  
gb|AMQ33859.1| RNA polymerase alpha subunit (chloroplast) [Stach...   589   0.0  
gb|AMQ32892.1| RNA polymerase alpha subunit (chloroplast) [Steno...   589   0.0  
ref|YP_009115927.1| RNA polymerase alpha subunit [Scrophularia t...   587   0.0  
ref|YP_009183624.1| RNA polymerase alpha subunit (chloroplast) [...   587   0.0  
gb|AMQ32979.1| RNA polymerase alpha subunit (chloroplast) [Phyll...   586   0.0  
gb|AMQ33331.1| RNA polymerase alpha subunit (chloroplast) [Steno...   585   0.0  
gb|AMQ33243.1| RNA polymerase alpha subunit (chloroplast) [Phyll...   585   0.0  
gb|AKZ23817.1| RNA polymerase alpha subunit (plastid) [Verbascum...   584   0.0  

>ref|YP_004935698.1| RNA polymerase alpha subunit (chloroplast) [Sesamum indicum]
            gi|347448327|gb|AEO92738.1| RNA polymerase alpha subunit
            (chloroplast) [Sesamum indicum]
            gi|496538633|gb|AGL45368.1| RpoA (chloroplast) [Sesamum
            indicum]
          Length = 337

 Score =  601 bits (1549), Expect = 0.0
 Identities = 299/333 (89%), Positives = 309/333 (92%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICV+GPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVKGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPI+ CIGLEIERNRGYLIKMP NFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPIHFCIGLEIERNRGYLIKMPQNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ  VPLSPFTFH+              KSIFIDQ ELSPRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQRTVPLSPFTFHDKLDKLRKNKNKIALKSIFIDQSELSPRVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVK++  IL+KHF IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKEIWGILEKHFAIDLP 333


>gb|ALO62155.1| RNA polymerase alpha subunit (chloroplast) [Crescentia cujete]
          Length = 337

 Score =  600 bits (1548), Expect = 0.0
 Identities = 299/333 (89%), Positives = 309/333 (92%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKV VSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVRVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEIL+NLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEILINLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+D TQHIASLTEPI+LCIGLEIERNRGYL KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDKTQHIASLTEPIHLCIGLEIERNRGYLRKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH VPLSPFTFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL DLLN
Sbjct: 241  DNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQSELSPRVYNCLKRSNIYTLFDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVKQ+L IL+K+F IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILEKYFAIDLP 333


>gb|AKZ23818.1| RNA polymerase alpha subunit (plastid) [Verbena hastata]
          Length = 331

 Score =  600 bits (1547), Expect = 0.0
 Identities = 299/331 (90%), Positives = 308/331 (93%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK +NVPHEYSTI GIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSKNVPHEYSTIRGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASLTEP+NLCIGLEIERNRGYL KMPHNFQDGSYP+DA+FMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLTEPMNLCIGLEIERNRGYLRKMPHNFQDGSYPIDAIFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH V LSPFTFH+              KSIFIDQFELSPRVYNCLKRSNIYTL DLLN
Sbjct: 241  DNQHTVCLSPFTFHDKLDKLRTNKKKIALKSIFIDQFELSPRVYNCLKRSNIYTLSDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEID 679
            NSQEDLMKI+HFRLEDVKQ+L IL+KHF ID
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILEKHFTID 331


>ref|YP_007353946.1| RNA polymerase alpha subunit (chloroplast) [Tectona grandis]
            gi|438687635|emb|CCP47162.1| RNA polymerase alpha subunit
            (chloroplast) [Tectona grandis]
            gi|438688319|emb|CCP47251.1| RNA polymerase alpha subunit
            (chloroplast) [Tectona grandis]
            gi|438688443|emb|CCP47340.1| RNA polymerase alpha subunit
            (chloroplast) [Tectona grandis]
          Length = 337

 Score =  598 bits (1541), Expect = 0.0
 Identities = 299/333 (89%), Positives = 308/333 (92%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPINLCI LEIERNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINLCIELEIERNRGYLIKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENL LE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLLLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH V LSPFTFH+              KSIFIDQ EL PRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQHTVLLSPFTFHDKLDKVRKNKKKIALKSIFIDQSELPPRVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVKQ+L +LKKHF IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGVLKKHFAIDLP 333


>ref|YP_009117253.1| RNA polymerase alpha subunit (chloroplast) [Premna microphylla]
            gi|748013937|gb|AJE28407.1| RNA polymerase alpha subunit
            (chloroplast) [Premna microphylla]
          Length = 336

 Score =  597 bits (1540), Expect = 0.0
 Identities = 296/332 (89%), Positives = 309/332 (93%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVT STRTLQWKCVESRTD KRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTASTRTLQWKCVESRTDGKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             +TRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CLTRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPI+LCIGLEIERNRGYL+KMP+NFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPISLCIGLEIERNRGYLVKMPNNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENLPLE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH VPLSPF FH+              KSIFIDQ ELSPRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQHTVPLSPFPFHDKLDKARKNKKKIALKSIFIDQSELSPRVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDL 676
            NSQEDLMKI+HFRLEDVKQ+L ILKK+F IDL
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILKKYFAIDL 332


>ref|YP_008815969.1| RNA polymerase alpha subunit (chloroplast) [Lindenbergia
            philippensis] gi|557136896|emb|CDI43950.1| RNA polymerase
            alpha subunit (chloroplast) [Lindenbergia philippensis]
          Length = 336

 Score =  597 bits (1538), Expect = 0.0
 Identities = 299/332 (90%), Positives = 308/332 (92%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREK+TVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRR LLGEIEGT
Sbjct: 1    MVREKITVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENV HEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICV GPGYVTAQD
Sbjct: 61   CITRVKSENVSHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVMGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            N+NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NMNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ  VPLSPFTFH+              KSIFIDQ ELSPRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQRTVPLSPFTFHD-KLDKLSKNKKITLKSIFIDQSELSPRVYNCLKRSNIYTLLDLLN 299

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDL 676
            NSQEDLMKI+HFRLEDVKQ+L IL+KHF IDL
Sbjct: 300  NSQEDLMKIEHFRLEDVKQILGILEKHFAIDL 331


>gb|ADD31211.1| RNA polymerase alpha subunit protein (chloroplast) [Antirrhinum
            majus]
          Length = 336

 Score =  594 bits (1532), Expect = 0.0
 Identities = 294/333 (88%), Positives = 308/333 (92%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK EN+PHEYSTITGIQESVHEILMNLKEIVLR+NLYGTCDASIC RGPGYVTAQD
Sbjct: 61   CITRVKSENIPHEYSTITGIQESVHEILMNLKEIVLRTNLYGTCDASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPIN CIGLEIERNRGYLIKMPHNFQDGSY +DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINFCIGLEIERNRGYLIKMPHNFQDGSYSIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPL+
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLD 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH +PLSPF+FH+              KSIFIDQ ELSPR YNCLKRSNIYTL DLLN
Sbjct: 241  DNQHTIPLSPFSFHD-KLDKLRKNKKIALKSIFIDQSELSPRAYNCLKRSNIYTLFDLLN 299

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRL+DVK++L IL+KHF IDLP
Sbjct: 300  NSQEDLMKIEHFRLKDVKEILGILEKHFAIDLP 332


>ref|YP_003359390.1| RNA polymerase alpha subunit (chloroplast) [Olea europaea]
            gi|330850774|ref|YP_004376452.1| RNA polymerase alpha
            subunit [Olea europaea subsp. europaea]
            gi|334700313|ref|YP_004563812.1| RNA polymerase alpha
            subunit [Olea europaea subsp. cuspidata]
            gi|334701650|ref|YP_004564035.1| RNA polymerase alpha
            subunit [Olea woodiana subsp. woodiana]
            gi|334701919|ref|YP_004564528.1| RNA polymerase alpha
            subunit [Olea europaea subsp. maroccana]
            gi|281428718|gb|ADA69957.1| RNA polymerase alpha subunit
            (chloroplast) [Olea europaea] gi|291059284|gb|ADD72120.1|
            RNA polymerase alpha subunit (chloroplast) [Olea
            europaea] gi|328795464|emb|CBR30346.1| RNA polymerase
            alpha subunit [Olea europaea subsp. europaea]
            gi|334084432|emb|CBR23861.1| RNA polymerase alpha subunit
            (chloroplast) [Olea europaea subsp. cuspidata]
            gi|334084518|emb|CBR24655.1| RNA polymerase alpha subunit
            [Olea europaea subsp. europaea]
            gi|334084604|emb|CBR30439.1| RNA polymerase alpha subunit
            [Olea europaea subsp. europaea]
            gi|334084690|emb|CBS29383.1| RNA polymerase alpha subunit
            [Olea woodiana subsp. woodiana]
            gi|334084895|emb|CBS29273.1| RNA polymerase alpha subunit
            [Olea europaea subsp. maroccana]
            gi|334084981|emb|CBJ04329.1| RNA polymerase alpha subunit
            [Olea europaea subsp. cuspidata]
            gi|334085067|emb|CBR23770.1| RNA polymerase alpha subunit
            (chloroplast) [Olea europaea subsp. cuspidata]
            gi|510934435|emb|CCQ09133.1| RNA polymerase alpha subunit
            (chloroplast) [Olea europaea subsp. europaea]
          Length = 337

 Score =  593 bits (1529), Expect = 0.0
 Identities = 294/333 (88%), Positives = 305/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESREDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTI GIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTIAGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPI+LCIGL+I+RNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPIDLCIGLQIKRNRGYLIKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            N NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH VPLSP TFH+              KSIFIDQ E SPRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQHTVPLSPLTFHDKLDKLRKNKKKIALKSIFIDQSEFSPRVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NS EDLMKI+H RLED+KQ+L IL+KHF IDLP
Sbjct: 301  NSPEDLMKIEHLRLEDIKQILVILEKHFAIDLP 333


>ref|YP_008964066.1| RNA polymerase subunit alpha [Ajuga reptans]
            gi|558697182|gb|AHA84937.1| RNA polymerase subunit alpha
            [Ajuga reptans]
          Length = 337

 Score =  592 bits (1526), Expect = 0.0
 Identities = 294/333 (88%), Positives = 307/333 (92%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGT DASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTFDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPINLCIGL+IERNRGYLIKMPH FQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINLCIGLKIERNRGYLIKMPHKFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSL PKEALHEASRNLIDLFIPFL+KEEENLPLE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLNPKEALHEASRNLIDLFIPFLYKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH  PLSPFTFH+              +SIFIDQ ELSP+VYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQHTAPLSPFTFHDKFDKVRKNKKKIALQSIFIDQSELSPKVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+ FRL+DVKQ+L IL+KHF I LP
Sbjct: 301  NSQEDLMKIEDFRLQDVKQILGILEKHFAIGLP 333


>gb|AMQ33771.1| RNA polymerase alpha subunit (chloroplast) [Stachys sylvatica]
          Length = 337

 Score =  591 bits (1524), Expect = 0.0
 Identities = 295/333 (88%), Positives = 306/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASIC RGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASL EPINLCIGLEIERNRGYLIKMPH FQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLVEPINLCIGLEIERNRGYLIKMPHTFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NG EKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEE+NLPLE
Sbjct: 181  NVNHSIHSYENGTEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEKNLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ+ VPLSP TFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL+DLLN
Sbjct: 241  DNQYTVPLSPLTFHDKLDKVRKNKNKIALKSIFIDQSELSPRVYNCLKRSNIYTLVDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVKQ+L IL+KHF IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILEKHFAIDLP 333


>ref|YP_009110633.1| RNA polymerase alpha subunit (chloroplast) [Hesperelaea palmeri]
            gi|725798317|emb|CED79793.1| RNA polymerase alpha subunit
            (chloroplast) [Hesperelaea palmeri]
          Length = 337

 Score =  590 bits (1522), Expect = 0.0
 Identities = 293/333 (87%), Positives = 303/333 (90%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESREDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTI GIQESVHEI MNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTIAGIQESVHEIFMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPI+LCIGL+I+RNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPIDLCIGLQIKRNRGYLIKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            N NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH VPLSP TFH               KSIFIDQ E SPRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQHTVPLSPLTFHAKLDKLRKNKKKIALKSIFIDQSEFSPRVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NS EDLMKI+H RLED+KQ+L IL+KHF IDLP
Sbjct: 301  NSPEDLMKIEHLRLEDIKQILVILEKHFAIDLP 333


>gb|AKZ23819.1| RNA polymerase alpha subunit (plastid) [Teucrium canadense]
          Length = 350

 Score =  591 bits (1523), Expect = 0.0
 Identities = 295/332 (88%), Positives = 305/332 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTL WKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLHWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEI+LRSNLY TCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIILRSNLYRTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN Q GSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNVQGGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENLPLE
Sbjct: 181  NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH  PLSPFTFH+              KSIFIDQ ELSPRVYNCLKRSNIYTLLDLLN
Sbjct: 241  DNQHTAPLSPFTFHDKLDKVRKNKKKIALKSIFIDQSELSPRVYNCLKRSNIYTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDL 676
            NSQEDLMKI+ FRLEDVKQ+L IL+KHF I L
Sbjct: 301  NSQEDLMKIEDFRLEDVKQILGILEKHFAIGL 332


>gb|AMQ33859.1| RNA polymerase alpha subunit (chloroplast) [Stachys byzantina]
          Length = 337

 Score =  589 bits (1519), Expect = 0.0
 Identities = 293/333 (87%), Positives = 306/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITR K ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASIC RGPGYVTAQD
Sbjct: 61   CITRAKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASL EPINLCIGLEIERNRGYLIKMPH FQDG++P+DAVFMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLVEPINLCIGLEIERNRGYLIKMPHTFQDGTFPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEE+NLPLE
Sbjct: 181  NVNHSIHSYENGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEKNLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ+ VPLSP TFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL+DLLN
Sbjct: 241  DNQYTVPLSPLTFHDKLDKVRKNKNKIVLKSIFIDQSELSPRVYNCLKRSNIYTLVDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVKQ+L IL+KHF IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILEKHFAIDLP 333


>gb|AMQ32892.1| RNA polymerase alpha subunit (chloroplast) [Stenogyne haliakalae]
            gi|1005882207|gb|AMQ33067.1| RNA polymerase alpha subunit
            (chloroplast) [Stenogyne bifida]
            gi|1005882296|gb|AMQ33155.1| RNA polymerase alpha subunit
            (chloroplast) [Haplostachys haplostachya]
            gi|1005882563|gb|AMQ33419.1| RNA polymerase alpha subunit
            (chloroplast) [Stenogyne kanehoana]
            gi|1005882741|gb|AMQ33595.1| RNA polymerase alpha subunit
            (chloroplast) [Stachys chamissonis]
            gi|1005882830|gb|AMQ33683.1| RNA polymerase alpha subunit
            (chloroplast) [Stachys coccinea]
          Length = 337

 Score =  589 bits (1518), Expect = 0.0
 Identities = 294/333 (88%), Positives = 305/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASIC RGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASL EPINLCIGLEIERNRGYLIKMPH FQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLVEPINLCIGLEIERNRGYLIKMPHTFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NG EKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEE+NLPLE
Sbjct: 181  NVNHSIHSYENGTEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEKNLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ+ VPLSP TFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL+DLLN
Sbjct: 241  DNQYTVPLSPLTFHDKLDKVRKNKNKIALKSIFIDQSELSPRVYNCLKRSNIYTLVDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVKQ+L IL+KHF IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILEKHFAIDLP 333


>ref|YP_009115927.1| RNA polymerase alpha subunit [Scrophularia takesimensis]
            gi|744673771|gb|AJD00756.1| RNA polymerase alpha subunit
            [Scrophularia takesimensis]
          Length = 335

 Score =  587 bits (1513), Expect = 0.0
 Identities = 297/333 (89%), Positives = 303/333 (90%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENV HEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVSHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGY  KMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYFFKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NVNHSIHSYGNENEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH V LSPF FH+              KSIFIDQ ELSPRVYNCLKRSNI TLLDLLN
Sbjct: 241  DNQHTVSLSPFYFHD--KFDKLRKKKIALKSIFIDQSELSPRVYNCLKRSNIDTLLDLLN 298

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
             SQEDLMKI HF LEDVKQ+L IL+KHF IDLP
Sbjct: 299  KSQEDLMKIDHFHLEDVKQILGILEKHFAIDLP 331


>ref|YP_009183624.1| RNA polymerase alpha subunit (chloroplast) [Scutellaria insignis]
            gi|949600183|gb|ALN11634.1| RNA polymerase alpha subunit
            (chloroplast) [Scutellaria insignis]
          Length = 337

 Score =  587 bits (1512), Expect = 0.0
 Identities = 294/333 (88%), Positives = 306/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRSLLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASL EPINLCIGLEIERNRGYLIKMPHNFQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLAEPINLCIGLEIERNRGYLIKMPHNFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEEENLPLE
Sbjct: 181  NVNHSIHSYENGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQH  PLSPFT HE              KSIFIDQ ELSPRVYNCLKRSNI TL DLLN
Sbjct: 241  DNQHGGPLSPFTLHEKLDKVRKKKKKIALKSIFIDQSELSPRVYNCLKRSNIDTLSDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HF LEDVK++L IL+K+F I+LP
Sbjct: 301  NSQEDLMKIEHFCLEDVKEILGILEKNFAIELP 333


>gb|AMQ32979.1| RNA polymerase alpha subunit (chloroplast) [Phyllostegia waimeae]
          Length = 337

 Score =  586 bits (1511), Expect = 0.0
 Identities = 293/333 (87%), Positives = 304/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESR DSKRLYY RFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRIDSKRLYYXRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASIC RGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASL EPINLCIGLEIERNRGYLIKMPH FQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLVEPINLCIGLEIERNRGYLIKMPHTFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NG EKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEE+NLPLE
Sbjct: 181  NVNHSIHSYENGTEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEKNLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ+ VPLSP TFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL+DLLN
Sbjct: 241  DNQYTVPLSPLTFHDKLDKVRKNKNKIALKSIFIDQSELSPRVYNCLKRSNIYTLVDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMKI+HFRLEDVKQ+L IL+KHF IDLP
Sbjct: 301  NSQEDLMKIEHFRLEDVKQILGILEKHFAIDLP 333


>gb|AMQ33331.1| RNA polymerase alpha subunit (chloroplast) [Stenogyne sessilis]
          Length = 337

 Score =  585 bits (1509), Expect = 0.0
 Identities = 292/333 (87%), Positives = 304/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESR DSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASIC RGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASL EPINLCIGLEIERNRGYLIKMPH FQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLVEPINLCIGLEIERNRGYLIKMPHTFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NG EKQ ILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEE+NLPLE
Sbjct: 181  NVNHSIHSYENGTEKQXILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEKNLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ+ VPLSP TFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL+DLLN
Sbjct: 241  DNQYTVPLSPLTFHDKLDKVRKNKNKIALKSIFIDQSELSPRVYNCLKRSNIYTLVDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMK++HFRLEDVKQ+L IL+KHF IDLP
Sbjct: 301  NSQEDLMKMEHFRLEDVKQILGILEKHFAIDLP 333


>gb|AMQ33243.1| RNA polymerase alpha subunit (chloroplast) [Phyllostegia velutina]
          Length = 337

 Score =  585 bits (1508), Expect = 0.0
 Identities = 291/333 (87%), Positives = 304/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESR +SKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRIBSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENVPHEYSTITGIQESVHEI+MNLKEIVLRSNLYGTC ASIC RGPGYVTAQD
Sbjct: 61   CITRVKSENVPHEYSTITGIQESVHEIIMNLKEIVLRSNLYGTCGASICARGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEIIDNTQHIASL EPINLCIGLEIERNRGYL KMPH FQDGSYP+DAVFMPVR
Sbjct: 121  IILPPYVEIIDNTQHIASLVEPINLCIGLEIERNRGYLTKMPHTFQDGSYPIDAVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSY NG EKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL+KEE+NLPLE
Sbjct: 181  NVNHSIHSYENGTEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLYKEEKNLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            DNQ+ VPLSP TFH+              KSIFIDQ ELSPRVYNCLKRSNIYTL+DLLN
Sbjct: 241  DNQYTVPLSPLTFHDKLDKVRKNKNKIALKSIFIDQSELSPRVYNCLKRSNIYTLVDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
            NSQEDLMK++HFRLEDVKQ+L IL+KHF IDLP
Sbjct: 301  NSQEDLMKMEHFRLEDVKQILGILEKHFAIDLP 333


>gb|AKZ23817.1| RNA polymerase alpha subunit (plastid) [Verbascum thapsus]
          Length = 337

 Score =  584 bits (1506), Expect = 0.0
 Identities = 292/333 (87%), Positives = 305/333 (91%)
 Frame = -1

Query: 1671 MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT 1492
            MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPL KGQADTIGIA+RRALLGEIEGT
Sbjct: 1    MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLRKGQADTIGIALRRALLGEIEGT 60

Query: 1491 SITRVKFENVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 1312
             ITRVK ENV HEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD
Sbjct: 61   CITRVKSENVSHEYSTITGIQESVHEILMNLKEIVLRSNLYGTCDASICVRGPGYVTAQD 120

Query: 1311 MILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHNFQDGSYPLDAVFMPVR 1132
            +ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL+KMPHNFQ+GSYP+D VFMPVR
Sbjct: 121  IILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLLKMPHNFQNGSYPIDTVFMPVR 180

Query: 1131 NVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 952
            NVNHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE
Sbjct: 181  NVNHSIHSYGNENEKQEILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHKEEENLPLE 240

Query: 951  DNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSPRVYNCLKRSNIYTLLDLLN 772
            +NQH V LSPF+F++              KSIFIDQ ELSPRVYNCLKRSNI TLLDLLN
Sbjct: 241  NNQHTVSLSPFSFYDKLDKLRKNKKKIASKSIFIDQSELSPRVYNCLKRSNIDTLLDLLN 300

Query: 771  NSQEDLMKIKHFRLEDVKQLLDILKKHFEIDLP 673
             SQEDLMKI+HF LEDVKQ+L IL+KHF IDLP
Sbjct: 301  KSQEDLMKIEHFHLEDVKQILGILEKHFAIDLP 333