BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00000850
         (837 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein A...   142   9e-35
ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein A...   141   9e-35
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438...   142   1e-34
ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422...   142   1e-34
ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein A...   140   4e-34
ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein A...   140   4e-34
ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein A...   140   5e-34
ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433...   139   2e-33
ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein A...   137   3e-33
ref|XP_008362180.1| PREDICTED: uncharacterized protein LOC103425...   138   3e-33
ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein A...   135   1e-32
ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444...   136   1e-32
ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418...   136   1e-32
ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein A...   134   4e-32
ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420...   132   3e-31
ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409...   130   1e-30
ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430...   119   7e-27
ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411...   118   2e-26
ref|XP_011470659.1| PREDICTED: uncharacterized protein LOC105353...   113   3e-26
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                   105   2e-22

>ref|XP_008389974.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 805

 Score =  142 bits (358), Expect = 9e-35
 Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W + S+F     
Sbjct: 349  RWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSNIIXMGQWVIPSIFSSTFP 408

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 409  DLTKEILEMPLPIDEDKDVLIWEASSSGGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 468

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG      C  C  +SE +DH F  C   +  W + +  
Sbjct: 469  YSILVWKILFNKLPTEDQLQRRGIPLAPXCQLCHKNSESIDHLFSSCDFAQCAWRWLATQ 528

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 529  FGTIIQPTGSLSDLWLDFLSKRFSPHLRNVWLASGFFLLMAIWKMRNKVKFEGKPPSFSR 588

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 589  LCRSTXAWIRQVGALTPGHVRG-ILDRQLLVSLGISPNXC 627


>ref|XP_008377870.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 591

 Score =  141 bits (355), Expect = 9e-35
 Identities = 86/280 (30%), Positives = 126/280 (45%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831 RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
           RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W + S+F     
Sbjct: 135 RWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSNIIRMGQWVIPSIFSSTFP 194

Query: 651 DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
           D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 195 DLTKEILEMPLPIDEDKDVLIWEASTSGGFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 254

Query: 477 RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
            S+LVW ++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 255 YSILVWXILFNKLPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCDFAQCAWRWLATQ 314

Query: 297 FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
           F   +     +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 315 FGTIIQPMGSLSDLWLDFLSKRFSPHLRNVWLASGFFLLMAIWKMRNKVKFEGKPPSFSR 374

Query: 117 VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
           +      +IR+      G++   +LD  +L  L I P  C
Sbjct: 375 LCRSTSXWIRQVGALTPGHVRG-TLDRQLLVSLGISPNPC 413


>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
          Length = 1384

 Score =  142 bits (358), Expect = 1e-34
 Identities = 86/280 (30%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W + S+F     
Sbjct: 928  RWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSCTKVSNIIRMGKWVIPSIFSSTFP 987

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 988  DLTKEILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 1047

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 1048 YSILVWKILFNKLPTXDXLQRRGIPLAPICQLCHKNSESIDHLFSSCEFAQCAWRWLATQ 1107

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 1108 FGTIIPPTGSLSDLWLVFLSKRFSPHLXNVWIASGFFLLMAIWKMRNKVKFEGKPPSXSR 1167

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 1168 LCRSTSAWIRQVGAJXPGHVRG-ILDRQLLXSLGISPNSC 1206


>ref|XP_008358855.1| PREDICTED: uncharacterized protein LOC103422573 [Malus domestica]
          Length = 1419

 Score =  142 bits (358), Expect = 1e-34
 Identities = 85/280 (30%), Positives = 126/280 (45%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G           KVS+ +  G W + S+F     
Sbjct: 928  RWVIGNGSTTSLWVDKWLDKPIVDVVGATXIAPSXSRTKVSNIIXMGXWVIPSIFSXXFP 987

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 988  DLTKEILEMPLPIDEDKDVLIWEXSXSGXFSFSDGYEIVRHRFPVKSWASIIWXPFIPPR 1047

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE ++H F  C   +  W + +  
Sbjct: 1048 YSILVWKILFNKLPTEDQLQRRGIXLAPICQLCHKNSESIBHLFSSCXFAQCAWRWLATQ 1107

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +     +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 1108 FGTXIXPXGSLSDLWLXFLSKRFSPHLXNVWLASGFFLLMAIWKMRNKVKFEGKPPSFSR 1167

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 1168 LCRSTXAWIRQVGALTPGHVRG-XLDRQLLVSLGISPNXC 1206


>ref|XP_008346965.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 768

 Score =  140 bits (353), Expect = 4e-34
 Identities = 86/280 (30%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W + S+F     
Sbjct: 312  RWVIGNGSTTSLWVDKWLDKPIVDVVGATXIAPSLSRTKVSNIIRMGQWVIPSIFSSTFP 371

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 372  DLTKEILEMPLPIDEDKDVLIWEASTSGGFSFSDGYEIVRHRFPVKSWASIIWXPFIPXR 431

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG      C  C  +SE +DH F  C   +  W + +  
Sbjct: 432  YSILVWKILFNKLPTEDQLQRRGIXLAPXCQLCHKNSESIDHLFSSCDFAQCAWRWLATQ 491

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +     +  + +  L  + S     +W  +   L+  IW  RNK  FE    S   
Sbjct: 492  FGTIIXPXGSLSDLWLDFLSKRFSPHXXNVWLASGFXLLMAIWKMRNKVKFEGXPPSFSR 551

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR       G++    LD  +L  L I P  C
Sbjct: 552  LCXSTXAWIRXVGALTPGHVRG-XLDRQLLVSLGISPNXC 590


>ref|XP_008370907.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 899

 Score =  140 bits (353), Expect = 4e-34
 Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +    W + S+F     
Sbjct: 443  RWVIGNGSTTSLWVDKWLDXPIVDVVGATEIAPSLSRTKVSNIIRMXKWVIPSIFSSTFP 502

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 503  DLTXEILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 562

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 563  YSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQ 622

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 623  FGTIIPPTGSLSDLWLDFLSKRFSPHLRNVWLASGFFLLMAIWKMRNKVKFEGKPPSFSX 682

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 683  LCRSTSAWIRQVGALTXGHVRG-ILDRQLLVSLXISPNSC 721


>ref|XP_008357937.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 1048

 Score =  140 bits (353), Expect = 5e-34
 Identities = 86/280 (30%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W + S+F     
Sbjct: 592  RWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSXTKVSNIIRMGKWVIPSIFSSTFP 651

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 652  DLTKEILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHXFPVKSWASIIWRPFIPPR 711

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 712  YSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCEFAQCAWRWLATQ 771

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L    S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 772  FGTXIPPTGSJSDLWLVFLSKXFSPHLXNVWIASGFFLLMAIWKMRNKXKFEGKPPSXSR 831

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 832  LCRSTSAWIRQVGALTPGHVRG-ILDRQLLVSLGISPNSC 870


>ref|XP_008369981.1| PREDICTED: uncharacterized protein LOC103433498 [Malus domestica]
          Length = 1384

 Score =  139 bits (349), Expect = 2e-33
 Identities = 85/280 (30%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W +  +F     
Sbjct: 928  RWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAXSLSRTKVSNIIRMGXWVIPXIFSSTFP 987

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 988  DLTKEILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 1047

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE  DH F  C   +  W + +  
Sbjct: 1048 YSILVWKILFNKLPTXDQLQRRGIPLAPICQLCHKNSESXDHLFSSCXFAQCAWRWLATQ 1107

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L  + S  +   W  +   L+  IW  RNK  FE    S   
Sbjct: 1108 FGTIIPPTGSLSDLWLXFLSKRFSPHLXNXWJASGFFLLMAIWKMRNKVKFEGKPPSXSR 1167

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 1168 LCRSTSAWIRQVGALXPGHVRG-ILDRQLLVSLGISPNSC 1206


>ref|XP_008345768.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 591

 Score =  137 bits (344), Expect = 3e-33
 Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831 RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
           RW+IG+GST S W D WL   I D +G       +   KVS+ +    W + S F     
Sbjct: 135 RWVIGNGSTTSLWVDKWLDKPIVDVVGATEIAPSLSRTKVSNIIRMXKWVIPSFFXSTFP 194

Query: 651 DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
           D+  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 195 DLTNEILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASTIWRPFIPPR 254

Query: 477 RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
            S+LVW+++ NKLP    LQ RG     +C  C  +SE ++H F  C   +  W + +  
Sbjct: 255 YSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHKNSESIBHLFSSCEFAQCAWRWLATQ 314

Query: 297 FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
           F   +  +  +  + +  L    S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 315 FGTXIPPTGSLSDLWLVFLSXXFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPSFSR 374

Query: 117 VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
           +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 375 LCRSTSAWIRQVGALTPGHVRG-ILDRQLLVSLGISPNSC 413


>ref|XP_008362180.1| PREDICTED: uncharacterized protein LOC103425857 [Malus domestica]
          Length = 1384

 Score =  138 bits (347), Expect = 3e-33
 Identities = 83/275 (30%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W + S+F     
Sbjct: 928  RWVIGNGSTTSLWVDKWLDXPIVDVVGATEIAXSLSRTKVSNIIRMGXWVIPSIFSSTFP 987

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L+MP  +   KD  IW  S     S    Y  +   FP+  W   IW   IP R
Sbjct: 988  DLTKEILEMPLPIDEDKDVLIWEVSTSXVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 1047

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE  DH F  C      W + +  
Sbjct: 1048 YSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHKNSESXDHLFSSCEFAXCAWXWLATQ 1107

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L    S     +W  +   L+  IW  RNK  FE    S   
Sbjct: 1108 FGTXIPXTXSJSDLXLXFLSXXFSXXXXNVWJASGFFLLMXIWKMRNKXKFEGKPPSXSR 1167

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI 13
            +     ++IR+      G++    LD  +L  L I
Sbjct: 1168 LCXSTXAWIRQVGXJTPGHVRG-ILDXQLLXSLGI 1201


>ref|XP_008384440.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
           domestica]
          Length = 577

 Score =  135 bits (340), Expect = 1e-32
 Identities = 85/280 (30%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831 RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
           RW+IG+GST S W D WL   I D  G       +   KVS+ +  G W + S+F     
Sbjct: 121 RWVIGNGSTTSLWVDKWLDKPIVDVXGATEIAXSLSRTKVSNIIRMGXWVIPSIFSSTFP 180

Query: 651 DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
           D+  ++L MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 181 DLTKEILXMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 240

Query: 477 RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
            S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +    + +  
Sbjct: 241 YSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSSCXFAQCAXRWLATQ 300

Query: 297 FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
           F   +  +  +  + +  L  + S  +   W  +   L+  IW  RNK  FE    S   
Sbjct: 301 FGTIIPPTGSLSDLWLDFLSKRFSPHLRNXWLASGFFLLMAIWKMRNKVKFEGKPPSFSR 360

Query: 117 VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
           +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 361 LCRSTSAWIRQVGALTPGHVRG-ILDRQLLVSLGISPNSC 399


>ref|XP_008381797.1| PREDICTED: uncharacterized protein LOC103444619 [Malus domestica]
          Length = 1183

 Score =  136 bits (343), Expect = 1e-32
 Identities = 82/275 (29%), Positives = 121/275 (44%), Gaps = 2/275 (0%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D  G       +   KVS+ +  G W + S+F     
Sbjct: 795  RWVIGNGSTTSLWVDKWLDXPIVDVXGATEIAXSLSXTKVSNIIRMGXWVIPSIFSXXFP 854

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L MP  +   KD  IW  S  G  S    Y  +   FP+  W    W   IP R
Sbjct: 855  DLTKEILXMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHXFPVKSWASIXWRPFIPPR 914

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+ VW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 915  YSIXVWKILFNKLPTXDQLQRRGIPLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQ 974

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L    S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 975  FGTXIPPTGSJSDLWLXFLSKXFSPHLXNVWJASGFFLLMAIWKMRNKVKFEGKPPSXSR 1034

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI 13
            +     ++IR+      G++    LD  +L  L I
Sbjct: 1035 LCRSTSAWIRQVGXLXPGHVRG-ILDRQLLVSLGI 1068


>ref|XP_008354602.1| PREDICTED: uncharacterized protein LOC103418244 [Malus domestica]
          Length = 1384

 Score =  136 bits (343), Expect = 1e-32
 Identities = 77/251 (30%), Positives = 112/251 (44%), Gaps = 2/251 (0%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +  G W +   F     
Sbjct: 928  RWVIGNGSTTSLWVDKWLDXPIVDVVGATEIAXSLSRTKVSNIIRMGKWVIPXXFSSTFP 987

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+   +L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 988  DLTKXILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASIIWRPFIPPR 1047

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C      W + +  
Sbjct: 1048 YSILVWKILFNKLPTXDXLQRRGIPLAPICQLCHKNSESIDHLFSSCEFAXCAWXWLATQ 1107

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 1108 FGTIIPXTXSJSDLXLVFLSKRFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPSFSR 1167

Query: 117  VRAQVFSFIRE 85
            +      +IR+
Sbjct: 1168 LCXSTSXWIRQ 1178


>ref|XP_008385092.1| PREDICTED: putative ribonuclease H protein At1g65750 [Malus
            domestica]
          Length = 715

 Score =  134 bits (338), Expect = 4e-32
 Identities = 84/280 (30%), Positives = 124/280 (44%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D +G       +   KVS+ +    W + S F     
Sbjct: 259  RWVIGNGSTTSLWVDKWLDKPIXDVVGATEIAXSLSRTKVSNIIRMXKWVIPSXFSSTFX 318

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
             +  ++L+MP  +   KD  IW  S  G  S    Y  +   FP+  W   IW   IP R
Sbjct: 319  XLTXEILEMPLPIDEDKDVLIWEVSTSGVFSFSDGYEIVRHRFPVKSWASXIWRPFIPPR 378

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 379  YSILVWKILFNKLPTEDQLQRRGIPLAPICQLCHKNSESIDHLFSXCEFAQCAWRWLATQ 438

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L    S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 439  FGTIIPPTGSLSDLWLXFLSKXFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPSFSR 498

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 499  LCRSTXAWIRQVGALTPGHVRG-ILDRQLLVSLGISPNSC 537


>ref|XP_008356537.1| PREDICTED: uncharacterized protein LOC103420255 [Malus domestica]
          Length = 1251

 Score =  132 bits (332), Expect = 3e-31
 Identities = 85/280 (30%), Positives = 122/280 (43%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+GST S W D WL   I D  G           KVS+ +  G W + S+F     
Sbjct: 795  RWVIGNGSTTSLWVDKWLDKPIVDVXGATXIAXSXSRTKVSNIIRMGXWVIPSIFSXXFX 854

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L MP  +   KD  IW  S  G  S    Y  +   FP+      IW   IP R
Sbjct: 855  DLTKEILXMPLPIDEDKDVLIWEXSTSGXFSFSDGYEIVRHXFPVKSXASIIWRPFIPPR 914

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE  DH F  C   +  W + +  
Sbjct: 915  YSILVWKILFNKLPTEDXLQRRGIPLAPICZLCHKNSESXDHLFSXCXFAQCAWXWLATQ 974

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +     +  + +  L  + S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 975  FGTIIXPXGSJSDLWLXFLSKRFSPHLRNVWJASGFFLLMAIWKMRNKVKFEGKPPSXSR 1034

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 1035 LCXSTSAWIRQVGALTPGHVRG-XLDRQLLVSLGISPNXC 1073


>ref|XP_008346905.1| PREDICTED: uncharacterized protein LOC103409892 [Malus domestica]
          Length = 1251

 Score =  130 bits (328), Expect = 1e-30
 Identities = 83/280 (29%), Positives = 121/280 (43%), Gaps = 3/280 (1%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+G T S W   WL   I D  G           KVS+ +  G W + S+F     
Sbjct: 795  RWVIGNGXTTSLWVXKWLDKPIXDVXGATXIAXSXSRTKVSNIIRMGXWVIPSIFSXXFX 854

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
            D+  ++L MP  +   KD  IW  S  G  S    Y  +   FP+      IW   IP R
Sbjct: 855  DLTKEILXMPLPIDEDKDVLIWEXSTSGXFSFSDGYEIVRHRFPVKSXASIIWRPFIPPR 914

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++ NKLP    LQ RG     +C  C  +SE +DH F  C   +  W + +  
Sbjct: 915  YSILVWKILFNKLPTEDXLQRRGIPLAPICQLCHKNSESIDHLFSSCXFAQCAWRWLATQ 974

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L  + S  +   W  +   L+  IW  RNK  FE    S   
Sbjct: 975  FGTIIXXTGSLSDLWLDFLSKRFSPHLRNXWLASGFFLLMAIWKMRNKVKFEGKPPSFSR 1034

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI-PGYC 1
            +     ++IR+      G++    LD  +L  L I P  C
Sbjct: 1035 LCRSTSAWIRQVGALTPGHVRG-XLDRQLLVSLGISPNXC 1073


>ref|XP_008366684.1| PREDICTED: uncharacterized protein LOC103430323 [Malus domestica]
          Length = 1380

 Score =  119 bits (299), Expect = 7e-27
 Identities = 89/280 (31%), Positives = 115/280 (41%), Gaps = 5/280 (1%)
 Frame = -1

Query: 837  DSRWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILN 658
            +SRWIIGDG  +SFW+D WL   I           ++L  +VSD +   +W L   F   
Sbjct: 926  NSRWIIGDGRXVSFWFDKWLDEPIISXSLFSVISPKVLP-RVSDVIEAQSWSLPDYFSNL 984

Query: 657  CEDIVMDMLDMPVV--GGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIP 484
               IV  +L +P+      D  IW  S  G  S    Y  I        W K IW   IP
Sbjct: 985  FPSIVQQILRLPLPLNXXXDKLIWEPSPTGKFSFSSGYHLIRXRHSDCAWAKVIWQHFIP 1044

Query: 483  SRRSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFS 304
             R S+L WRL H+KLP    LQ RG    ++C  C +  E   H F  C + R  W +  
Sbjct: 1045 PRLSILAWRLFHDKLPTEDALQRRGISLASICCLCHNSEESTAHLFFGCRISRQLWRWLX 1104

Query: 303  GLFNVHL---DFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYK 133
              F   L   D     W V ++      S Q+  LW    +  I  IW  RNK IFE   
Sbjct: 1105 CQFGTSLPLPDSLVAFWDVYVRK---PFSKQLHNLWIFAGLXTISAIWKARNKFIFEGRP 1161

Query: 132  ISIMAVRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI 13
            I    +   + S I        GY  +   D  I+  L I
Sbjct: 1162 IYFHRLCMSINSAIVHGGKFIPGY--SQGFDTRIIXSLGI 1199


>ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411380 [Malus domestica]
          Length = 1384

 Score =  118 bits (296), Expect = 2e-26
 Identities = 76/275 (27%), Positives = 113/275 (41%), Gaps = 2/275 (0%)
 Frame = -1

Query: 831  RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
            RW+IG+G T S W   WL   I D  G       +   KVS+ +  G W + S F     
Sbjct: 928  RWVIGNGXTTSLWVXKWLDXPIXDVXGATEIAXSLSXTKVSNIIRMGXWVIPSXFSSTFX 987

Query: 651  DIVMDMLDMP--VVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVRWGKWIWHTCIPSR 478
             +   +L+MP  +   KD  IW  S     S    Y  +   FP+  W   IW   IP R
Sbjct: 988  XLTXXILEMPLPIDEDKDVLIWEVSTSXVFSFSDGYEXVRHXFPVKSWASXIWXPFIPPR 1047

Query: 477  RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
             S+LVW+++  KL     LQ RG     +C  C  +SE  +H F  C        + +  
Sbjct: 1048 YSILVWKILFXKLXXXDXLQRRGIXLAPICXLCXKNSESXBHLFSXCEFAXCAXXWLATQ 1107

Query: 297  FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
            F   +  +  +  + +  L    S  +  +W  +   L+  IW  RNK  FE    S   
Sbjct: 1108 FGTXIPXTXSJSDLWLXFLSKXFSPXLXNVWJXSGFFLLMXIWKMRNKVKFEGKPPSXSR 1167

Query: 117  VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI 13
            +     ++IR+      G++    LD  +L  L I
Sbjct: 1168 LXXSTSAWIRQVXXJXPGHVRG-ILDRQLLXSLGI 1201


>ref|XP_011470659.1| PREDICTED: uncharacterized protein LOC105353313 [Fragaria vesca
           subsp. vesca]
          Length = 280

 Score =  113 bits (282), Expect = 3e-26
 Identities = 80/275 (29%), Positives = 117/275 (42%), Gaps = 2/275 (0%)
 Frame = -1

Query: 831 RWIIGDGSTISFWWDNWLGYSIADKLGIPRRFRRILAQKVSDYLFDGTWHLTSLFILNCE 652
           +W +GDG  ISFW DNWLG  +A  +G+       L  KV++++ D  W L         
Sbjct: 27  QWCVGDGRKISFWLDNWLGKPLASSIGVIGCIP--LHAKVNEFIVDSHWAL--------- 75

Query: 651 DIVMDMLDMPVVGGKDSRIWSNSVHGAVSSRIAYWHIHTNFPIVR--WGKWIWHTCIPSR 478
                    P +  K++ ++ +S                   IVR  WGK IW   I   
Sbjct: 76  ---------PALTAKEAFVYFSS------------------HIVRRSWGKVIWSKAIQPC 108

Query: 477 RSLLVWRLIHNKLPLWGHLQSRGTIGPAVCHFCFHHSEDLDHCFLDCPMVRPNWDFFSGL 298
           +SL+VW+ +H +L     LQ RG   P+ C FC  H+E   H  L CP +   W +   L
Sbjct: 109 KSLVVWKALHGRLLTDDALQRRGFSLPSCCSFCGSHAETGVHLLLRCPRIMVLWKWVCLL 168

Query: 297 FNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLITLIWVIWTCRNKAIFEDYKISIMA 118
           F+      S +  V +    +  S Q   LW     TLIW IW  RN   FE      + 
Sbjct: 169 FSHSFSPWSSLEDVFLGGWVSAFSKQKRRLWIFIACTLIWYIWITRNLLRFEGKVFDALE 228

Query: 117 VRAQVFSFIRESRHTPIGYMNNDSLDLSILSKLAI 13
            +  +    +ES        NN ++ +S+ S+L I
Sbjct: 229 AQRHLLDLFKESVRESFHTYNNHAV-VSVYSRLGI 262


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score =  105 bits (261), Expect = 2e-22
 Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 4/192 (2%)
 Frame = -1

Query: 717 KVSDYLFDGTWHLTSLFILNCEDIV--MDMLDMPVVGGKDSRIWSNSVHGAVSSRIAYWH 544
           KV++YL +G W L+  F      +V  +  + +P+    D  IW++SV G +S+++A+  
Sbjct: 2   KVANYLVNGEWILSDFFAYKDNALVEKIHQIALPLDETLDKLIWTDSVDGDLSNKLAFSF 61

Query: 543 IHTNFPIVRWGKWIWHTCIPSRRSLLVWRLIHNKLPLWGHLQSRGT-IGPAVCHFCFHHS 367
           +  + P V W K +W+   P   + + WR +HNKLP   +L+ RG  I    C FC   +
Sbjct: 62  LPGHGPTVHWAKMLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQA 121

Query: 366 EDLDHCFLDCPMVRPNWDFFSGLFNVHLDFSSGIWGVIIQSLEAKGSSQILFLWKLTLIT 187
           E   H FL CP+    WD+     + HLDFSS +            S  +  +    ++ 
Sbjct: 122 ETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSIL----------NISRMVQHVMNSAIVH 171

Query: 186 LIWVIW-TCRNK 154
           ++W IW  C NK
Sbjct: 172 IMWSIWLECNNK 183