BLASTX nr result
ID: Rehmannia27_contig00000691
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00000691
(1185 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,... 499 e-172
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,... 470 e-160
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 455 e-155
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,... 454 e-154
emb|CDP05091.1| unnamed protein product [Coffea canephora] 452 e-153
ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,... 451 e-153
ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,... 450 e-153
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,... 450 e-153
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 444 e-150
ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prun... 428 e-146
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,... 432 e-146
gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arbor... 430 e-145
gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium r... 430 e-144
ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prun... 428 e-144
ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,... 426 e-143
ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,... 425 e-143
ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao] g... 424 e-143
gb|AKC88737.1| sigma factor [Francoa sonchifolia] 416 e-139
ref|XP_006376620.1| RNA polymerase sigma subunit SigE family pro... 414 e-138
ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,... 412 e-138
>ref|XP_011084487.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Sesamum indicum]
Length = 518
Score = 499 bits (1286), Expect = e-172
Identities = 267/353 (75%), Positives = 293/353 (83%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSAARTP+GL+ R TRVS+ +R VILSFK+DK+KN ALIAPRESVALP+E
Sbjct: 1 MGVVTVSSSAARTPLGLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAK 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 492
KE KR RKVKK ERV+AVSTDEA PST++LDY+EAAAKLE IYKRSPATTVS E+V
Sbjct: 61 KEKEKRSRKVKKLVERVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVKD 120
Query: 493 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKG-KRMGLEKRIALKMKKEGEFVASS-Q 666
G + VRS+RK +R+ LEKRIALK KE +F+ASS Q
Sbjct: 121 QRVKRRRPLRKRTGEAEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSSQ 180
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
K+K KNDEDEKIDRLVRDYS+STDLVSLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+
Sbjct: 181 KRKQRKNDEDEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQ 240
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
VKE LQ DLGREVTDDELAEAT + V LRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 241 VKENLQNDLGREVTDDELAEATKTNAVQLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 300
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF+NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTY LFWIRHAI+RSMTLS
Sbjct: 301 DFSNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYSLFWIRHAIIRSMTLS 353
>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Erythranthe guttata]
gi|604299780|gb|EYU19623.1| hypothetical protein
MIMGU_mgv1a020453mg [Erythranthe guttata]
Length = 515
Score = 470 bits (1209), Expect = e-160
Identities = 244/352 (69%), Positives = 282/352 (80%), Gaps = 1/352 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVS+SA+RT +GLN R TRVS+L+RPV+ +FK+DK K LI+PRES ALP+E
Sbjct: 1 MGVVTVSTSASRTSLGLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEAT 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 492
K+N KRLRKVKKR+ERVNAVSTDEAPPST++LDY+EAAAKLE I+K+SP +S ++V
Sbjct: 61 KDNEKRLRKVKKRAERVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKD 120
Query: 493 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQK 669
N VRS+R K +R+ LEKRIAL+ KKE E A Q+
Sbjct: 121 VRVKRRQPRKRTE--YADEAEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQR 178
Query: 670 KKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKV 849
+K KNDEDEKIDRLVRDYS+S+DLVSLDWKKMKIPPVLPS EH WLFKLMQP+K IL V
Sbjct: 179 RKTGKNDEDEKIDRLVRDYSASSDLVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDV 238
Query: 850 KETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQD 1029
KET++ +LGRE TD++LA A NMD V LRKQLE+GRAARNKLIKHNLRLVLFVMNKYFQD
Sbjct: 239 KETIENNLGREPTDEKLATAINMDTVQLRKQLEIGRAARNKLIKHNLRLVLFVMNKYFQD 298
Query: 1030 FTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
F+NG RFQDLCQAG KGLITAIDRFEPKRK RLSTYGLFWIRH+I+RSMTLS
Sbjct: 299 FSNGSRFQDLCQAGAKGLITAIDRFEPKRKLRLSTYGLFWIRHSIIRSMTLS 350
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Solanum tuberosum]
Length = 516
Score = 455 bits (1171), Expect = e-155
Identities = 243/353 (68%), Positives = 281/353 (79%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+R+P+GL++R STR+ LKRPVI+SFK DK+KNT LIAP+ES++L +E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETS 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 492
KEN KR R+V KRSERV+AV+ EA PSTLELDYSEAAAKLE+IYKRS T S+ +V
Sbjct: 61 KENEKRSRRVSKRSERVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQD 119
Query: 493 XXXXXXXXXXXXN-GXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSQ 666
N V+++RK KR+ L++RIAL KEGE VASS+
Sbjct: 120 HLVKRRPRTRKRIVEGDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSE 179
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
++K ++ EDEKID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH WLFKLMQPMK IL+
Sbjct: 180 RRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQ 239
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
VKE LQ DLGRE TD E+AEATNMD LRK+LEVGRAARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 240 VKENLQNDLGREPTDGEVAEATNMDASELRKKLEVGRAARNKLIKHNLRLVLFVMNKYFQ 299
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NG RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT S
Sbjct: 300 DFANGSRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTS 352
>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
Length = 519
Score = 454 bits (1167), Expect = e-154
Identities = 239/355 (67%), Positives = 279/355 (78%), Gaps = 4/355 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+R+P+GL+T S + LKRPV++SFK DK+K T L+AP+ES++LP+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60
Query: 313 KENGKRLRKVKKRSERVNAVSTD-EAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVX 489
KEN KR R+V KR+ERV+AVS D EA PSTLELDYSEAAAKLE+IYKRS T SD +
Sbjct: 61 KENEKRSRRVSKRTERVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAK 120
Query: 490 XXXXXXXXXXXXXN--GXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVAS 660
N V+++RK KR+ L++RIAL KEGE VAS
Sbjct: 121 DHQIVKRRQRTRKRIIEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180
Query: 661 SQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 840
SQK++ ++ EDEKID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK I
Sbjct: 181 SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240
Query: 841 LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 1020
L+VKE LQ DLGRE TD E+AEATN+D LRK LEVGRAARNKLIKHNLRLVLFV+NKY
Sbjct: 241 LQVKENLQNDLGREPTDAEVAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300
Query: 1021 FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
FQDF NGP+FQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT S
Sbjct: 301 FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTS 355
>emb|CDP05091.1| unnamed protein product [Coffea canephora]
Length = 530
Score = 452 bits (1164), Expect = e-153
Identities = 239/366 (65%), Positives = 282/366 (77%), Gaps = 15/366 (4%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSAAR+P+GLN + +TR+S +RP ++ FK+ K+KN AL+APRES++LPVE +
Sbjct: 1 MGVVTVSSSAARSPLGLNAKLATRISQPRRPSLVPFKNGKTKNAALVAPRESLSLPVEGS 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDV-X 489
N KRL++V KR ERV AVS EA STLELDY+EAAAKLENIYK SPAT VSD +V
Sbjct: 61 NVNEKRLKRVVKRPERVKAVSALEAASSTLELDYNEAAAKLENIYKLSPATKVSDMEVND 120
Query: 490 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQ 666
VRS R K KR+ L+KR+ L+ K++ E ++SSQ
Sbjct: 121 LGMKRDQQRRKRMKEANVEAEKGTNYTVVRSPRKKSKRLSLDKRVTLRKKRDSEAISSSQ 180
Query: 667 K-------------KKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSW 807
K +K S++DEDEKI+RL+R+YS STD SLDWKKMKIPPVLPS+EHSW
Sbjct: 181 KRKSSEGDEDEEINRKSSEDDEDEKINRLLREYSGSTDFTSLDWKKMKIPPVLPSSEHSW 240
Query: 808 LFKLMQPMKEILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHN 987
LFKLMQPMK I++VKE L DLGRE TD ELAEATN+D++HLRK ++VG+AARNKLIKHN
Sbjct: 241 LFKLMQPMKAIIQVKENLPNDLGREPTDGELAEATNLDVLHLRKDIKVGQAARNKLIKHN 300
Query: 988 LRLVLFVMNKYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIV 1167
LRLVLFVMNKYFQDFTNGP+FQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAI+
Sbjct: 301 LRLVLFVMNKYFQDFTNGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAII 360
Query: 1168 RSMTLS 1185
RSMTLS
Sbjct: 361 RSMTLS 366
>ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Erythranthe guttata]
gi|604306141|gb|EYU25198.1| hypothetical protein
MIMGU_mgv1a004656mg [Erythranthe guttata]
Length = 516
Score = 451 bits (1160), Expect = e-153
Identities = 250/358 (69%), Positives = 281/358 (78%), Gaps = 7/358 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNT--RCSTRVSVLKRPVILSFKSDKSKNT-ALIAPRESVALPV 303
MGVVTVSSSAARTPVGL+ R ST VS+ K+P++LS K+DK+K + ALIAP ESVALP
Sbjct: 1 MGVVTVSSSAARTPVGLDAIIRYSTHVSLSKKPLVLSLKTDKAKKSRALIAPLESVALPS 60
Query: 304 EVNKENGKRLRKVKKR--SERVNAVS-TDEAPP-STLELDYSEAAAKLENIYKRSPATTV 471
E E K LRKVKK +RV+AVS TDEA P STL+LDY+EAAAKLE +YK SPA T
Sbjct: 61 EAKNETVKSLRKVKKTRPDKRVSAVSITDEASPGSTLDLDYTEAAAKLEYLYKTSPALT- 119
Query: 472 SDEDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRKGKRMGLEKRIALKMKKEGEF 651
DE++ N VRSQR+GKR+ LEKR+AL+MKKE
Sbjct: 120 -DEEIKTKSVQTRQPRRKR-----IDESVETKNLVRSQRRGKRLSLEKRVALRMKKESVP 173
Query: 652 VASSQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPM 831
+ S +K+ ++K+D+DEKIDRL+RDYS S+D SLDWKK KIPPVLPS+EH WLFKLMQPM
Sbjct: 174 LLSQKKEVNNKSDDDEKIDRLLRDYSISSDFFSLDWKKTKIPPVLPSSEHVWLFKLMQPM 233
Query: 832 KEILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVM 1011
KEILKVKETL DLGREV DDELAEATN D+ LRKQLEVGR ARNKLIKHNLRLVLFVM
Sbjct: 234 KEILKVKETLTNDLGREVRDDELAEATNTDVFQLRKQLEVGRTARNKLIKHNLRLVLFVM 293
Query: 1012 NKYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
NKYFQDF NGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMT+S
Sbjct: 294 NKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTIS 351
>ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
pennellii]
Length = 516
Score = 450 bits (1157), Expect = e-153
Identities = 239/357 (66%), Positives = 281/357 (78%), Gaps = 6/357 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+R+P+GL++R S R+ LKRPVI+SFK DK+KNT L++P+ES++LP+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETS 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRS-----PATTVSD 477
KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKRS P T V D
Sbjct: 61 KENEKRSRRVTKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 478 EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFV 654
V N V+++RK KR+ L++RIAL KEG+ +
Sbjct: 120 HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKML 175
Query: 655 ASSQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMK 834
ASS+++K ++ EDEKID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK
Sbjct: 176 ASSERRKLKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMK 235
Query: 835 EILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMN 1014
IL+VKE LQ DLGRE TD E+AEATN+D LRK+LE GRAARNKLIKHNLRLVLFVMN
Sbjct: 236 AILQVKENLQNDLGREPTDGEVAEATNIDASELRKKLEAGRAARNKLIKHNLRLVLFVMN 295
Query: 1015 KYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
KYFQDF N RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT S
Sbjct: 296 KYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTS 352
>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana sylvestris]
Length = 519
Score = 450 bits (1157), Expect = e-153
Identities = 238/355 (67%), Positives = 277/355 (78%), Gaps = 4/355 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+R+P+GL+TR S + LKRPV++SFK DK+K T L+AP+ES++LP+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETS 60
Query: 313 KENGKRLRKVKKRSERVNAVSTD-EAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVX 489
KEN KR R+V KR+ERV+AVS D EA S LELDYSEAAAKLE+IYKRS T SD +
Sbjct: 61 KENEKRSRRVSKRTERVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEAK 120
Query: 490 XXXXXXXXXXXXXN--GXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVAS 660
N V+++RK KR+ L++RIAL KEGE VAS
Sbjct: 121 DHQIVKRRQRTRKRIVEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVAS 180
Query: 661 SQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 840
SQK++ ++ EDEKID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK I
Sbjct: 181 SQKRELKEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAI 240
Query: 841 LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 1020
L+VKE LQ DLGRE TD E AEATN+D LRK LEVGRAARNKLIKHNLRLVLFV+NKY
Sbjct: 241 LQVKENLQNDLGREPTDAEAAEATNIDASELRKNLEVGRAARNKLIKHNLRLVLFVINKY 300
Query: 1021 FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
FQDF NGP+FQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+RSMT S
Sbjct: 301 FQDFANGPKFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRSMTTS 355
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
lycopersicum]
Length = 516
Score = 444 bits (1143), Expect = e-150
Identities = 237/357 (66%), Positives = 279/357 (78%), Gaps = 6/357 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+R+P+GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +
Sbjct: 1 MGVVTVSSSASRSPLGLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETS 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRS-----PATTVSD 477
KEN KR R+V KR+ERV+AV T EAPPSTLELDYSEAAAKLE+IYKRS P T V D
Sbjct: 61 KENEKRSRRVSKRTERVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKD 119
Query: 478 EDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFV 654
V N V+++RK KR+ L++RIAL KEG+ +
Sbjct: 120 HLVKRRPRTRKRIVESDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKML 175
Query: 655 ASSQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMK 834
ASS+++K +++ EDEKID+LVR+YS +TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK
Sbjct: 176 ASSERRKLNEDTEDEKIDKLVREYSGATDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMK 235
Query: 835 EILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMN 1014
IL+VKE LQ DLGRE TD E+AEATNMD LRK+LE GRAARNKLIKHNLRLVLFVMN
Sbjct: 236 AILQVKENLQNDLGREPTDGEVAEATNMDASELRKKLEAGRAARNKLIKHNLRLVLFVMN 295
Query: 1015 KYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
KYFQDF N RFQDLCQAGVKGLITAIDRFEP RKFRLSTYGLFWIRHAI+R MT S
Sbjct: 296 KYFQDFANASRFQDLCQAGVKGLITAIDRFEPNRKFRLSTYGLFWIRHAIIRYMTTS 352
>ref|XP_007219009.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
gi|462415471|gb|EMJ20208.1| hypothetical protein
PRUPE_ppa004259mg [Prunus persica]
Length = 390
Score = 428 bits (1100), Expect = e-146
Identities = 219/355 (61%), Positives = 274/355 (77%), Gaps = 4/355 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++ TAL+AP+E + LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 486
K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T + EDV
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 487 XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAS 660
+ N V R K KR+ L KR+ALK K+ + ++S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 661 SQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 840
+K+ S+ +E+EKI+ LVR+YS+STDLVSLDWKKMKIPPVL S+EH+WLFKLMQPMK +
Sbjct: 181 IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240
Query: 841 LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 1020
L+VKE LQ DLGRE T+ ELAEATNM +V ++K LEVGRAAR+KLIKHNLRLVLFVMNKY
Sbjct: 241 LEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY 300
Query: 1021 FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
FQDF NGP+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 301 FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLS 355
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Vitis vinifera]
gi|302143685|emb|CBI22546.3| unnamed protein product
[Vitis vinifera]
Length = 518
Score = 432 bits (1111), Expect = e-146
Identities = 230/355 (64%), Positives = 273/355 (76%), Gaps = 4/355 (1%)
Frame = +1
Query: 133 MGVVTVSSSAA--RTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVE 306
MGVVTVSSSA+ RTP GLN + S + L+RP++L+FK+DK+KN AL+ P E + LP+E
Sbjct: 1 MGVVTVSSSASASRTPFGLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIE 60
Query: 307 VNKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-ED 483
+K++ KRLR+ K S+RV AVSTDE P ++ELDY+EAAAKLENIYK SPAT VS+ ED
Sbjct: 61 TSKDHKKRLRRASKPSKRVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAED 120
Query: 484 VXXXXXXXXXXXXXXNGXXXXXXXXXXXNFVR-SQRKGKRMGLEKRIALKMKKEGEFVAS 660
+ N VR +K KR+ LEKRIAL K+ + VAS
Sbjct: 121 LERVVRRGRQRRKRVTLADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVAS 180
Query: 661 SQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 840
QKK+ SKN EDE ID LVR+YS+STDLVSLDWKKMKIPPVLP +EH+WLFKLMQPMK +
Sbjct: 181 IQKKRDSKN-EDENIDVLVREYSASTDLVSLDWKKMKIPPVLPPSEHAWLFKLMQPMKGL 239
Query: 841 LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 1020
L+VK+ LQ DLGRE TD ELAEA +M V +R+ +EVG+AARNKLIKHNLRLVLFV+NKY
Sbjct: 240 LEVKDNLQKDLGREPTDGELAEAMSMSAVQVRRHMEVGQAARNKLIKHNLRLVLFVINKY 299
Query: 1021 FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
FQ+F NGP+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 300 FQEFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIMRSMTLS 354
>gb|KHG11410.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
Length = 516
Score = 430 bits (1106), Expect = e-145
Identities = 230/353 (65%), Positives = 265/353 (75%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVV+VSSSAARTPVGL T+ ST+ +RP I++FK+DKS NTAL+ R+ LPVE
Sbjct: 1 MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIMAFKADKSNNTALVTLRDHNLLPVETA 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 492
KE+ KR K KK S+ VN TDE P T+++DY+EAAAKLENIYK SP+T DE
Sbjct: 61 KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE 120
Query: 493 XXXXXXXXXXXXNGXXXXXXXXXXXNF-VRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 666
+ VRSQ +K +R+GL+KRI LK +E + V S Q
Sbjct: 121 GETKGRHLRRKRSTESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ 180
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
KK N E EKIDRLVRDYS+STDLVSLDWKKMKIPPVLPSTEH+WLFKLMQPMK +L+
Sbjct: 181 SKKGISN-ESEKIDRLVRDYSASTDLVSLDWKKMKIPPVLPSTEHTWLFKLMQPMKALLE 239
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
KE LQ DLGR+ T+DELAEATN +R+QLEVGRAARNKLIKHNLRLVLFV+NKYFQ
Sbjct: 240 AKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVINKYFQ 299
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 300 DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLS 352
>gb|KJB52622.1| hypothetical protein B456_008G270500 [Gossypium raimondii]
Length = 547
Score = 430 bits (1106), Expect = e-144
Identities = 230/360 (63%), Positives = 266/360 (73%), Gaps = 2/360 (0%)
Frame = +1
Query: 112 FGSHSFGMGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESV 291
F F MGVV+VSSSAARTPVGL T+ ST+ +RP I++FK+DKS NTAL+ R+
Sbjct: 25 FAKRQFEMGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKADKSNNTALVTLRDHN 84
Query: 292 ALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTV 471
LPVE KE+ KR K KK S+ VN TDE P T+++DY+EAAAKLENIYK SP+T
Sbjct: 85 LLPVETAKEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQT 144
Query: 472 SDEDVXXXXXXXXXXXXXXNGXXXXXXXXXXXNF-VRSQ-RKGKRMGLEKRIALKMKKEG 645
DE + VRSQ +K +R+GL+KRI LK +E
Sbjct: 145 FDEKGSEGETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREE 204
Query: 646 EFVASSQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQ 825
+ V S Q KK N E EKIDRLVRDYS+STDLVSLDWKKMK+PPVLPSTEH+WLFKLMQ
Sbjct: 205 KSVVSGQSKKGISN-ESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQ 263
Query: 826 PMKEILKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLF 1005
PMK +L+ KE LQ DLGR+ T+DELAEATN +R+QLEVGRAARNKLIKHNLRLVLF
Sbjct: 264 PMKALLEAKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLF 323
Query: 1006 VMNKYFQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
V+ KYFQDF NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 324 VIKKYFQDFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLS 383
>ref|XP_007219010.1| hypothetical protein PRUPE_ppa004259mg [Prunus persica]
gi|462415472|gb|EMJ20209.1| hypothetical protein
PRUPE_ppa004259mg [Prunus persica]
Length = 519
Score = 428 bits (1100), Expect = e-144
Identities = 219/355 (61%), Positives = 274/355 (77%), Gaps = 4/355 (1%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSA+RTP+GL+T+ + + S L++P+I++FK+D++ TAL+AP+E + LP+E
Sbjct: 1 MGVVTVSSSASRTPLGLSTKLTIQRSTLRKPLIVAFKTDEANKTALVAPQEKIPLPIETR 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD--EDV 486
K++ KRL K +K ++ V + +TD A P TLE+DY+EAAAKLEN+YKRSP T + EDV
Sbjct: 61 KKHQKRLGKARKLAKSVKSATTDVASPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDV 120
Query: 487 XXXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQR--KGKRMGLEKRIALKMKKEGEFVAS 660
+ N V R K KR+ L KR+ALK K+ + ++S
Sbjct: 121 DGLMRRGRKRRKKTSESDADKDENRTSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISS 180
Query: 661 SQKKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEI 840
+K+ S+ +E+EKI+ LVR+YS+STDLVSLDWKKMKIPPVL S+EH+WLFKLMQPMK +
Sbjct: 181 IVRKRKSRKNENEKIEELVREYSTSTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL 240
Query: 841 LKVKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKY 1020
L+VKE LQ DLGRE T+ ELAEATNM +V ++K LEVGRAAR+KLIKHNLRLVLFVMNKY
Sbjct: 241 LEVKENLQKDLGREPTNGELAEATNMSVVQVKKHLEVGRAARSKLIKHNLRLVLFVMNKY 300
Query: 1021 FQDFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
FQDF NGP+FQDLCQAGVKGLITAIDRFEPKR FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 301 FQDFANGPKFQDLCQAGVKGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTLS 355
>ref|XP_012440029.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Gossypium raimondii]
gi|823214552|ref|XP_012440030.1| PREDICTED: RNA
polymerase sigma factor sigE, chloroplastic/mitochondrial
[Gossypium raimondii] gi|763785552|gb|KJB52623.1|
hypothetical protein B456_008G270500 [Gossypium
raimondii] gi|763785553|gb|KJB52624.1| hypothetical
protein B456_008G270500 [Gossypium raimondii]
Length = 516
Score = 426 bits (1096), Expect = e-143
Identities = 228/353 (64%), Positives = 264/353 (74%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVV+VSSSAARTPVGL T+ ST+ +RP I++FK+DKS NTAL+ R+ LPVE
Sbjct: 1 MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKADKSNNTALVTLRDHNLLPVETA 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 492
KE+ KR K KK S+ VN TDE P T+++DY+EAAAKLENIYK SP+T DE
Sbjct: 61 KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE 120
Query: 493 XXXXXXXXXXXXNGXXXXXXXXXXXNF-VRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 666
+ VRSQ +K +R+GL+KRI LK +E + V S Q
Sbjct: 121 GETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ 180
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
KK N E EKIDRLVRDYS+STDLVSLDWKKMK+PPVLPSTEH+WLFKLMQPMK +L+
Sbjct: 181 SKKGISN-ESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQPMKALLE 239
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
KE LQ DLGR+ T+DELAEATN +R+QLEVGRAARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 240 AKENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYFQ 299
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 300 DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLS 352
>ref|XP_015878246.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Ziziphus jujuba]
Length = 515
Score = 425 bits (1093), Expect = e-143
Identities = 223/352 (63%), Positives = 266/352 (75%), Gaps = 1/352 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSSAA+TP+GL+ + T S+ K+P+I++FK+DK TAL+AP E + LP+E
Sbjct: 1 MGVVTVSSSAAQTPLGLSPKFPTYQSISKKPLIVAFKADKFNETALVAPHEQIPLPIEAR 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXX 492
KE+ KRL KV K S+RVNA TDEA TLE+DY+EAAAKLENIYK SP T SD +
Sbjct: 61 KEHQKRLGKVNKPSKRVNAAITDEASTCTLEVDYNEAAAKLENIYKLSPMTDASDVEDVG 120
Query: 493 XXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSQK 669
+FVRS+RK KR+ L+KR+ LK K E A +K
Sbjct: 121 GLKTRGRRRKKKISADDEEEKRTSGSFVRSRRKKAKRLNLDKRVELKKNKVDEVNACVRK 180
Query: 670 KKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKV 849
+K S ++ D I+ LVR+YS+STDLVSLDWKKMKIPPVLPSTEH+WLFKLMQP+K +L+V
Sbjct: 181 RKESISENDN-IENLVREYSASTDLVSLDWKKMKIPPVLPSTEHAWLFKLMQPLKALLQV 239
Query: 850 KETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQD 1029
E L+ LGR+ T+ ELAEATNM I +++ LEVGRAARNKLIKHNLRLVLFV+NKYFQD
Sbjct: 240 NENLKQSLGRKPTEGELAEATNMSIAQVKRHLEVGRAARNKLIKHNLRLVLFVINKYFQD 299
Query: 1030 FTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
F NGPRFQDLCQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 300 FANGPRFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLS 351
>ref|XP_007038959.1| Sigma factor E isoform 1 [Theobroma cacao]
gi|590673674|ref|XP_007038960.1| Sigma factor E isoform 1
[Theobroma cacao] gi|508776204|gb|EOY23460.1| Sigma
factor E isoform 1 [Theobroma cacao]
gi|508776205|gb|EOY23461.1| Sigma factor E isoform 1
[Theobroma cacao]
Length = 516
Score = 424 bits (1091), Expect = e-143
Identities = 226/353 (64%), Positives = 268/353 (75%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVV+VSSSAARTP+GL+T+ ST+ +RP+ ++FK+DKS NTAL+ P+E + LP+E
Sbjct: 1 MGVVSVSSSAARTPLGLSTKFSTQRCTSRRPLTVAFKADKSDNTALVTPQEHILLPIETA 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 489
KE+ KR K KK + VN V TD+ P TLE+DY+EAAAKLENIYK SPAT SD E+V
Sbjct: 61 KEHPKRRGKAKKDPKIVNHVFTDDGSPCTLEVDYNEAAAKLENIYKLSPATRSSDVEEVE 120
Query: 490 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 666
VR+Q + KR+ L+ RIALK +E + V S +
Sbjct: 121 GKIKGRRQRRKRSKESDEKGVNSNDQIVVRNQTNRIKRLSLDNRIALKKNREEKPVVSVR 180
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
+KK S+N E EKIDRLVRDYS+STDLVSLDW+KMKIPPVLPS EH+WLFKLMQPMK +L+
Sbjct: 181 RKKSSEN-ESEKIDRLVRDYSASTDLVSLDWRKMKIPPVLPSIEHTWLFKLMQPMKALLQ 239
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
KE LQ DLGR+ T+DELAEATNM +RK LEVG+AARNKLIKHNLRLVLF +NKYFQ
Sbjct: 240 AKENLQKDLGRDPTEDELAEATNMSAAQVRKHLEVGQAARNKLIKHNLRLVLFSINKYFQ 299
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NGPRFQDLCQAGVKGLITAIDRFEP+R+FRLSTY LFWIRHAI+RSMTLS
Sbjct: 300 DFANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYSLFWIRHAIIRSMTLS 352
>gb|AKC88737.1| sigma factor [Francoa sonchifolia]
Length = 513
Score = 416 bits (1069), Expect = e-139
Identities = 222/353 (62%), Positives = 266/353 (75%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVVTVSSS AR+P+GL+T+ ST LKRP I+S K+DK+ N AL+AP+E + LP++
Sbjct: 1 MGVVTVSSSPARSPLGLSTKFSTHRCTLKRPSIVSLKADKTNNIALVAPQEQIPLPIQTP 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 489
K+ KRL + K S+RV AVSTD P TLELD++EAAAKLENIYK SP T SD ED+
Sbjct: 61 KKQRKRLGRAIKTSKRVKAVSTDVTSPCTLELDFNEAAAKLENIYKLSPPTDCSDTEDID 120
Query: 490 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 666
NG N VR++ +K KR+ L++RI+L KEG+ +SS+
Sbjct: 121 GMKSRHRKRM---NGGDDTGEKRTSDNVVRNRTKKVKRLSLDRRISLIRNKEGDADSSSR 177
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
K KN E+ +D LVR+YS+STDLVSLDWKKMKIPPVL S EH+WLFKLMQPMKE+L+
Sbjct: 178 SKIDQKN-ENYSVDWLVREYSASTDLVSLDWKKMKIPPVLSSLEHAWLFKLMQPMKELLQ 236
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
+KE L D RE TD ELAEA NM+++ +RK ++VGRAARNKLIKHNLRLVLFVMNKYFQ
Sbjct: 237 LKENLHKDFSREPTDYELAEALNMNVIEMRKDMDVGRAARNKLIKHNLRLVLFVMNKYFQ 296
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NGPRFQDLCQAGVKGLITAIDRFEPKR+ RLSTYGLFWIRHAI RS+TLS
Sbjct: 297 DFANGPRFQDLCQAGVKGLITAIDRFEPKRRVRLSTYGLFWIRHAITRSLTLS 349
>ref|XP_006376620.1| RNA polymerase sigma subunit SigE family protein [Populus
trichocarpa] gi|550326141|gb|ERP54417.1| RNA polymerase
sigma subunit SigE family protein [Populus trichocarpa]
Length = 512
Score = 414 bits (1063), Expect = e-138
Identities = 225/353 (63%), Positives = 269/353 (76%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVV+VSSSA+RTP+GL+T+ ST S KRP+I++FK++KS NT+L+AP E + LPVE
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKANKSNNTSLVAPHEQIPLPVETT 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 489
K KRL K KK S R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED
Sbjct: 61 KGK-KRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 490 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 666
+ VR++ +K KR+ LEKRI+L++K E + V+S+
Sbjct: 119 GVIRRGRQRKRKISEGDKETEDRTGKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAG 178
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
K+K KN E+EKID LVR+YS+STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK +L+
Sbjct: 179 KRKDRKN-ENEKIDDLVREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
VKE LQ +LG E TD ELA+ATNMD++ +RKQ+ VGRAARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 238 VKEHLQENLGGEPTDVELAKATNMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NG +FQD CQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 298 DFANGTKFQDFCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLS 350
>ref|XP_011001910.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Populus euphratica]
Length = 512
Score = 412 bits (1060), Expect = e-138
Identities = 223/353 (63%), Positives = 267/353 (75%), Gaps = 2/353 (0%)
Frame = +1
Query: 133 MGVVTVSSSAARTPVGLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVN 312
MGVV+VSSSA+RTP+GL+T+ ST S KRP+I++FK+DKS N + +AP E + LP+E
Sbjct: 1 MGVVSVSSSASRTPLGLSTKFSTYGSTAKRPLIVAFKADKSSNPSFVAPHEQIPLPIETT 60
Query: 313 KENGKRLRKVKKRSERVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVX 489
K KRL K KK S R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED
Sbjct: 61 KGK-KRLGKSKKSSNRLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDAS 118
Query: 490 XXXXXXXXXXXXXNGXXXXXXXXXXXNFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQ 666
+ VR++ +K KR+ LEKRI+L++K E + V S+
Sbjct: 119 GVIRRGRQRKRKISEGDKEAEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVTSAG 178
Query: 667 KKKHSKNDEDEKIDRLVRDYSSSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILK 846
K+K KN E+EKID L+R+YS+STDLVSLDWKKMKIPPVL S+EH WLFKLMQPMK +L+
Sbjct: 179 KRKDRKN-ENEKIDELLREYSASTDLVSLDWKKMKIPPVLTSSEHVWLFKLMQPMKALLQ 237
Query: 847 VKETLQTDLGREVTDDELAEATNMDIVHLRKQLEVGRAARNKLIKHNLRLVLFVMNKYFQ 1026
VKE LQ +LGRE TD ELA+AT MD++ +RKQ+ VGRAARNKLIKHNLRLVLFV+ KYFQ
Sbjct: 238 VKEHLQENLGREPTDVELAKATTMDVLQVRKQIAVGRAARNKLIKHNLRLVLFVIKKYFQ 297
Query: 1027 DFTNGPRFQDLCQAGVKGLITAIDRFEPKRKFRLSTYGLFWIRHAIVRSMTLS 1185
DF NG +FQDLCQAGVKGLITAIDRFEPKR+FRLSTYGLFWIRHAI+RSMTLS
Sbjct: 298 DFANGTKFQDLCQAGVKGLITAIDRFEPKRRFRLSTYGLFWIRHAIIRSMTLS 350