BLASTX nr result

ID: Rehmannia27_contig00000358 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00000358
         (413 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protei...    86   1e-19
ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein ...    71   1e-13
ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus no...    70   2e-13
ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protei...    70   2e-13
ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protei...    67   6e-12
ref|XP_015893665.1| PREDICTED: cold-inducible RNA-binding protei...    66   8e-12
ref|XP_015058813.1| PREDICTED: cold-inducible RNA-binding protei...    67   9e-12
ref|XP_006363377.2| PREDICTED: cold-inducible RNA-binding protei...    67   1e-11
ref|XP_010033152.1| PREDICTED: cold-inducible RNA-binding protei...    66   1e-11
emb|CDP09008.1| unnamed protein product [Coffea canephora]             65   3e-11
ref|XP_002533105.1| PREDICTED: cold-inducible RNA-binding protei...    64   9e-11
ref|XP_007208554.1| hypothetical protein PRUPE_ppa024320mg [Prun...    63   1e-10
ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protei...    62   2e-10
ref|XP_009358339.1| PREDICTED: cold-inducible RNA-binding protei...    62   3e-10
ref|XP_008457543.1| PREDICTED: cold-inducible RNA-binding protei...    62   3e-10
ref|XP_010455682.1| PREDICTED: cold-inducible RNA-binding protei...    63   3e-10
ref|XP_009628435.1| PREDICTED: cold-inducible RNA-binding protei...    62   4e-10
ref|XP_010260084.1| PREDICTED: cold-inducible RNA-binding protei...    62   6e-10
ref|XP_002299889.1| RNA recognition motif-containing family prot...    61   9e-10
ref|XP_012064989.1| PREDICTED: glycine-rich RNA-binding, abscisi...    61   1e-09

>ref|XP_011095595.1| PREDICTED: cold-inducible RNA-binding protein-like [Sesamum
           indicum]
          Length = 92

 Score = 86.3 bits (212), Expect = 1e-19
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGK 281
           PKGFGFVKFASEL AQNALKAMNGRIVDGRLIFVEFAETT+PGK
Sbjct: 47  PKGFGFVKFASELDAQNALKAMNGRIVDGRLIFVEFAETTKPGK 90


>ref|XP_002284323.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Vitis
           vinifera] gi|297746123|emb|CBI16179.3| unnamed protein
           product [Vitis vinifera]
          Length = 112

 Score = 71.2 bits (173), Expect = 1e-13
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGK 281
           PKGFGFVKF SE+ A+ ALKAMNGRIV GRLIFVE A+TT+PG+
Sbjct: 65  PKGFGFVKFESEVDAEKALKAMNGRIVRGRLIFVEIAKTTRPGE 108


>ref|XP_010112904.1| Cold-inducible RNA-binding protein [Morus notabilis]
           gi|587948820|gb|EXC35053.1| Cold-inducible RNA-binding
           protein [Morus notabilis]
          Length = 94

 Score = 70.5 bits (171), Expect = 2e-13
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGK 281
           PKGFGFV + SE+ AQ ALKAMNGRIVDGRLIFVE A+T++PG+
Sbjct: 47  PKGFGFVTYESEVEAQKALKAMNGRIVDGRLIFVEVAKTSKPGE 90


>ref|XP_012854980.1| PREDICTED: cold-inducible RNA-binding protein-like [Erythranthe
           guttata]
          Length = 98

 Score = 70.5 bits (171), Expect = 2e-13
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGKTS 275
           PKGFGFVKF+SE+ AQNALK+MN RIVDGRLIFVEFA++T+   T+
Sbjct: 52  PKGFGFVKFSSEIDAQNALKSMNCRIVDGRLIFVEFAKSTKLDNTT 97


>ref|XP_010313557.1| PREDICTED: cold-inducible RNA-binding protein [Solanum
           lycopersicum]
          Length = 94

 Score = 66.6 bits (161), Expect = 6e-12
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQ 290
           PKGFGFV F SE  AQNAL ++NGRIVDGRLIFVE AETT+
Sbjct: 45  PKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTE 85


>ref|XP_015893665.1| PREDICTED: cold-inducible RNA-binding protein [Ziziphus jujuba]
          Length = 94

 Score = 66.2 bits (160), Expect = 8e-12
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGK 281
           PKGFGFV F SE+ A+NALKA+NGRIVDGRLIFVE A + Q G+
Sbjct: 47  PKGFGFVTFDSEVEARNALKALNGRIVDGRLIFVEVARSMQHGE 90


>ref|XP_015058813.1| PREDICTED: cold-inducible RNA-binding protein [Solanum pennellii]
          Length = 111

 Score = 66.6 bits (161), Expect = 9e-12
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQ 290
           PKGFGFV F SE  AQNAL ++NGRIVDGRLIFVE AETT+
Sbjct: 62  PKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTE 102


>ref|XP_006363377.2| PREDICTED: cold-inducible RNA-binding protein-like [Solanum
           tuberosum]
          Length = 115

 Score = 66.6 bits (161), Expect = 1e-11
 Identities = 32/41 (78%), Positives = 35/41 (85%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQ 290
           PKGFGFV F SE  AQNAL ++NGRIVDGRLIFVE AETT+
Sbjct: 66  PKGFGFVTFESEADAQNALNSLNGRIVDGRLIFVEVAETTE 106


>ref|XP_010033152.1| PREDICTED: cold-inducible RNA-binding protein [Eucalyptus grandis]
           gi|629086344|gb|KCW52701.1| hypothetical protein
           EUGRSUZ_J02066 [Eucalyptus grandis]
          Length = 103

 Score = 65.9 bits (159), Expect = 1e-11
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGKTS 275
           PKGFGFV + SE+ A  ALKA+NGRIVDGRLIFVEF +T  P K +
Sbjct: 47  PKGFGFVAYESEVEADRALKALNGRIVDGRLIFVEFVQTRGPKKAA 92


>emb|CDP09008.1| unnamed protein product [Coffea canephora]
          Length = 92

 Score = 64.7 bits (156), Expect = 3e-11
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = -2

Query: 409 KGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQ 290
           KGFGFV+F SE  AQNALKAMNGRIV+GRLIFVE A+TT+
Sbjct: 47  KGFGFVQFDSETDAQNALKAMNGRIVNGRLIFVEVAKTTR 86


>ref|XP_002533105.1| PREDICTED: cold-inducible RNA-binding protein [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score = 63.5 bits (153), Expect = 9e-11
 Identities = 31/44 (70%), Positives = 35/44 (79%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGK 281
           PKGFGFV F SE  AQ ALKAMNGRIVDGRL+FVE A++   G+
Sbjct: 47  PKGFGFVTFDSESQAQKALKAMNGRIVDGRLLFVEVAKSINSGE 90


>ref|XP_007208554.1| hypothetical protein PRUPE_ppa024320mg [Prunus persica]
           gi|462404196|gb|EMJ09753.1| hypothetical protein
           PRUPE_ppa024320mg [Prunus persica]
          Length = 94

 Score = 63.2 bits (152), Expect = 1e-10
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAE 299
           PKGFGFV + S++ AQ ALKAMNGR+VDGRLIFVEFA+
Sbjct: 47  PKGFGFVTYKSDVEAQKALKAMNGRMVDGRLIFVEFAQ 84


>ref|XP_004135289.1| PREDICTED: cold-inducible RNA-binding protein B [Cucumis sativus]
           gi|700196541|gb|KGN51718.1| Cold-inducible RNA binding
           protein [Cucumis sativus]
          Length = 89

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 31/43 (72%), Positives = 34/43 (79%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPG 284
           PKGFGFV F S   A+ ALKAM+GRIVDGRLIFVEFA+T   G
Sbjct: 47  PKGFGFVTFQSPAEAKKALKAMDGRIVDGRLIFVEFAKTGDMG 89


>ref|XP_009358339.1| PREDICTED: cold-inducible RNA-binding protein-like [Pyrus x
           bretschneideri]
          Length = 94

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAET 296
           PKGFGFV + S++ AQ ALKAMNGR+VDGRLIFVE A+T
Sbjct: 47  PKGFGFVTYQSDVEAQKALKAMNGRMVDGRLIFVEVAQT 85


>ref|XP_008457543.1| PREDICTED: cold-inducible RNA-binding protein B [Cucumis melo]
          Length = 95

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPG 284
           PKGFGFV F S + A+ AL+AM+GRIVDGRLIFVEFA+T + G
Sbjct: 47  PKGFGFVTFQSPVEAKKALQAMDGRIVDGRLIFVEFAKTRKHG 89


>ref|XP_010455682.1| PREDICTED: cold-inducible RNA-binding protein-like [Camelina
           sativa]
          Length = 116

 Score = 62.8 bits (151), Expect = 3e-10
 Identities = 31/46 (67%), Positives = 36/46 (78%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGKTS 275
           PKGFGFV F SE  AQ ALKA+NG+IVDGRLIFVE A+  +P  T+
Sbjct: 65  PKGFGFVTFKSEDDAQKALKALNGKIVDGRLIFVESAKEVEPPTTN 110


>ref|XP_009628435.1| PREDICTED: cold-inducible RNA-binding protein
           {ECO:0000312|EMBL:CAJ83306.1}-like [Nicotiana
           tomentosiformis]
          Length = 94

 Score = 62.0 bits (149), Expect = 4e-10
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQ 290
           PKGFGFV F SE  A+NAL ++NGRIVDGRLIFVE A+ TQ
Sbjct: 45  PKGFGFVTFESEEDARNALNSINGRIVDGRLIFVEVAQNTQ 85


>ref|XP_010260084.1| PREDICTED: cold-inducible RNA-binding protein-like [Nelumbo
           nucifera]
          Length = 116

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETT 293
           PKGFGFV + SE  AQ ALKAMNGR+VDGRLIFVE A+T+
Sbjct: 68  PKGFGFVTYESENEAQKALKAMNGRMVDGRLIFVEVAKTS 107


>ref|XP_002299889.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222847147|gb|EEE84694.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 88

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQ 290
           PKGFGFV F SE  A  ALKAMNGRIV+GRLIFVE A+ T+
Sbjct: 47  PKGFGFVTFESEADAHKALKAMNGRIVNGRLIFVEVAKDTE 87


>ref|XP_012064989.1| PREDICTED: glycine-rich RNA-binding, abscisic acid-inducible
           protein isoform X2 [Jatropha curcas]
          Length = 94

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 30/46 (65%), Positives = 35/46 (76%)
 Frame = -2

Query: 412 PKGFGFVKFASELAAQNALKAMNGRIVDGRLIFVEFAETTQPGKTS 275
           PKGFGFV F SE  A  A+K MNGRIVDGRLI VE A++++PG  S
Sbjct: 47  PKGFGFVTFDSESEALKAMKTMNGRIVDGRLICVEVAKSSKPGDDS 92


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