BLASTX nr result

ID: Rehmannia27_contig00000296 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia27_contig00000296
         (572 letters)

Database: ./nr 
           84,704,028 sequences; 31,038,470,784 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011086789.1| PREDICTED: chlorophyll a-b binding protein, ...   130   4e-34
gb|EYU25891.1| hypothetical protein MIMGU_mgv1a025195mg, partial...   126   1e-32
ref|XP_012851204.1| PREDICTED: chlorophyll a-b binding protein, ...   126   2e-32
ref|XP_006352516.1| PREDICTED: chlorophyll a-b binding protein 7...   120   2e-30
sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding pro...   120   4e-30
ref|XP_009587026.1| PREDICTED: chlorophyll a-b binding protein, ...   119   6e-30
dbj|BAT80378.1| hypothetical protein VIGAN_02338500 [Vigna angul...   119   6e-30
ref|XP_014499138.1| PREDICTED: chlorophyll a-b binding protein, ...   119   6e-30
gb|KOM29115.1| hypothetical protein LR48_Vigan635s004000 [Vigna ...   119   1e-29
ref|NP_001296176.1| chlorophyll a-b binding protein 7, chloropla...   118   2e-29
gb|ABK95596.1| unknown [Populus trichocarpa]                          118   2e-29
ref|XP_009787153.1| PREDICTED: chlorophyll a-b binding protein, ...   118   2e-29
ref|XP_002299309.1| chlorophyll a/b-binding protein type II prec...   118   2e-29
gb|KYP39727.1| hypothetical protein KK1_038953 [Cajanus cajan]        118   3e-29
ref|XP_011002123.1| PREDICTED: chlorophyll a-b binding protein 7...   117   6e-29
ref|XP_011036086.1| PREDICTED: chlorophyll a-b binding protein 7...   117   6e-29
gb|ABK95601.1| unknown [Populus trichocarpa]                          117   6e-29
gb|KHG11922.1| Chlorophyll a-b binding 7, chloroplastic [Gossypi...   116   9e-29
ref|XP_002303791.1| chlorophyll a/b-binding protein type II prec...   116   1e-28
ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein, ...   116   1e-28

>ref|XP_011086789.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Sesamum
           indicum]
          Length = 271

 Score =  130 bits (327), Expect = 4e-34
 Identities = 62/77 (80%), Positives = 63/77 (81%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK+GSIVGATKASFFGGRKLRVSKF              ADPDRPLWFPGSTPPPWLDGS
Sbjct: 23  QKSGSIVGATKASFFGGRKLRVSKFAAPSGTRSVTVCAAADPDRPLWFPGSTPPPWLDGS 82

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 83  LPGDFGFDPLGLGSDPE 99


>gb|EYU25891.1| hypothetical protein MIMGU_mgv1a025195mg, partial [Erythranthe
           guttata]
          Length = 250

 Score =  126 bits (316), Expect = 1e-32
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QKNG+IVGATKASFFGGRKLRVSKF              ADPDRP+WFPGSTPP WLDGS
Sbjct: 2   QKNGAIVGATKASFFGGRKLRVSKFAAPSNTRSVAVCVAADPDRPIWFPGSTPPEWLDGS 61

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDP+
Sbjct: 62  LPGDFGFDPLGLGSDPD 78


>ref|XP_012851204.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic isoform
           X1 [Erythranthe guttata]
           gi|848902579|ref|XP_012851205.1| PREDICTED: chlorophyll
           a-b binding protein, chloroplastic isoform X2
           [Erythranthe guttata]
          Length = 270

 Score =  126 bits (316), Expect = 2e-32
 Identities = 59/77 (76%), Positives = 62/77 (80%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QKNG+IVGATKASFFGGRKLRVSKF              ADPDRP+WFPGSTPP WLDGS
Sbjct: 22  QKNGAIVGATKASFFGGRKLRVSKFAAPSNTRSVAVCVAADPDRPIWFPGSTPPEWLDGS 81

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDP+
Sbjct: 82  LPGDFGFDPLGLGSDPD 98


>ref|XP_006352516.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic
           [Solanum tuberosum]
          Length = 270

 Score =  120 bits (302), Expect = 2e-30
 Identities = 58/78 (74%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKF-TXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDG 108
           ++NGSIVGATKASF GGR+LRVSK+ T             A+PDRPLWFPGSTPPPWLDG
Sbjct: 21  RRNGSIVGATKASFLGGRRLRVSKYSTTPAARSATTVCVAAEPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 81  SLPGDFGFDPLGLGSDPE 98


>sp|P13869.1|CB12_PETHY RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCI type II CAB; Flags: Precursor
           gi|169214|gb|AAA33711.1| chlorophyll binding protein
           precursor [Petunia x hybrida] gi|226259|prf||1503272A
           chlorophyll binding protein
          Length = 270

 Score =  120 bits (300), Expect = 4e-30
 Identities = 59/78 (75%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKF-TXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDG 108
           QKNGSIVGATKASF GG++LRVSKF               ADPDRPLWFPGSTPP WLDG
Sbjct: 21  QKNGSIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 81  SLPGDFGFDPLGLGSDPE 98


>ref|XP_009587026.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 269

 Score =  119 bits (299), Expect = 6e-30
 Identities = 58/78 (74%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGSIVGATKASF GG++LRVSK+              A DPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKNGSIVGATKASFLGGKRLRVSKYVAPAGSRSVAVSAVAADPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGL SDPE
Sbjct: 81  SLPGDFGFDPLGLASDPE 98


>dbj|BAT80378.1| hypothetical protein VIGAN_02338500 [Vigna angularis var.
           angularis]
          Length = 270

 Score =  119 bits (299), Expect = 6e-30
 Identities = 56/78 (71%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGS++G  KASF GGRKLRV+K+T               DPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKNGSVLGTPKASFLGGRKLRVNKYTAAVGVRSTTTVCAVADPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 81  SLPGDFGFDPLGLGSDPE 98


>ref|XP_014499138.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Vigna
           radiata var. radiata]
          Length = 270

 Score =  119 bits (299), Expect = 6e-30
 Identities = 56/78 (71%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGS++G  KASF GGRKLRV+K+T               DPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKNGSVLGTPKASFLGGRKLRVNKYTAAVGGRSTTTVCAVADPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 81  SLPGDFGFDPLGLGSDPE 98


>gb|KOM29115.1| hypothetical protein LR48_Vigan635s004000 [Vigna angularis]
          Length = 314

 Score =  119 bits (299), Expect = 1e-29
 Identities = 56/78 (71%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGS++G  KASF GGRKLRV+K+T               DPDRPLWFPGSTPPPWLDG
Sbjct: 34  QKNGSVLGTPKASFLGGRKLRVNKYTAAVGVRSTTTVCAVADPDRPLWFPGSTPPPWLDG 93

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 94  SLPGDFGFDPLGLGSDPE 111


>ref|NP_001296176.1| chlorophyll a-b binding protein 7, chloroplastic [Solanum
           lycopersicum] gi|970057903|ref|XP_015055626.1|
           PREDICTED: chlorophyll a-b binding protein 7,
           chloroplastic [Solanum pennellii]
           gi|115765|sp|P10708.1|CB12_SOLLC RecName:
           Full=Chlorophyll a-b binding protein 7, chloroplastic;
           AltName: Full=LHCI type II CAB-7; Flags: Precursor
           gi|19180|emb|CAA32197.1| chlorophyll a/b-binding protein
           [Solanum lycopersicum] gi|170431|gb|AAA34159.1|
           chlorophyll a/b-binding protein [Solanum lycopersicum]
           gi|226546|prf||1601518A chlorophyll a/b binding protein
           II
          Length = 270

 Score =  118 bits (296), Expect = 2e-29
 Identities = 57/78 (73%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKF-TXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDG 108
           ++NGSIVG TKASF GGR+LRVSK+ T             ADPDRPLWFPGSTPPPWLDG
Sbjct: 21  RRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGL SDPE
Sbjct: 81  SLPGDFGFDPLGLASDPE 98


>gb|ABK95596.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  118 bits (295), Expect = 2e-29
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK G +VG+TKASF  G+KLR+ K+T             ADPDRPLWFPGSTPPPWLDGS
Sbjct: 21  QKTGFLVGSTKASFLSGKKLRLKKYTAPTAARSVTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 81  LPGDFGFDPLGLGSDPE 97


>ref|XP_009787153.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic
           [Nicotiana sylvestris] gi|698567424|ref|XP_009773771.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic [Nicotiana sylvestris]
          Length = 270

 Score =  118 bits (295), Expect = 2e-29
 Identities = 58/78 (74%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGSIVGATKASF GG++LRVSK               A DPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKNGSIVGATKASFLGGKRLRVSKHVAPAGSRSVAVSAVAADPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGL SDPE
Sbjct: 81  SLPGDFGFDPLGLASDPE 98


>ref|XP_002299309.1| chlorophyll a/b-binding protein type II precursor [Populus
           trichocarpa] gi|222846567|gb|EEE84114.1| chlorophyll
           a/b-binding protein type II precursor [Populus
           trichocarpa]
          Length = 272

 Score =  118 bits (295), Expect = 2e-29
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK G +VG+TKASF  G+KLR+ K+T             ADPDRPLWFPGSTPPPWLDGS
Sbjct: 24  QKTGFLVGSTKASFLSGKKLRLKKYTAPTAARSVTVCVAADPDRPLWFPGSTPPPWLDGS 83

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 84  LPGDFGFDPLGLGSDPE 100


>gb|KYP39727.1| hypothetical protein KK1_038953 [Cajanus cajan]
          Length = 295

 Score =  118 bits (296), Expect = 3e-29
 Identities = 56/78 (71%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGS++G TKASF  GRKL+VS FT               DPDRPLWFPGSTPPPWLDG
Sbjct: 46  QKNGSLLGTTKASFLSGRKLKVSNFTAPVGTRSSTTVCAVADPDRPLWFPGSTPPPWLDG 105

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 106 SLPGDFGFDPLGLGSDPE 123


>ref|XP_011002123.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic
           [Populus euphratica]
          Length = 269

 Score =  117 bits (292), Expect = 6e-29
 Identities = 53/77 (68%), Positives = 59/77 (76%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK G +VG+TKASF  G+KLR+ ++T             ADPDRPLWFPGSTPPPWLDGS
Sbjct: 21  QKTGFLVGSTKASFLSGKKLRLKRYTTPTAARSVTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 81  LPGDFGFDPLGLGSDPE 97


>ref|XP_011036086.1| PREDICTED: chlorophyll a-b binding protein 7, chloroplastic-like
           [Populus euphratica]
          Length = 269

 Score =  117 bits (292), Expect = 6e-29
 Identities = 53/77 (68%), Positives = 59/77 (76%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK G +VG+TKASF  G+KLR+ ++T             ADPDRPLWFPGSTPPPWLDGS
Sbjct: 21  QKTGFLVGSTKASFLSGKKLRLKRYTTPTAARSVTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 81  LPGDFGFDPLGLGSDPE 97


>gb|ABK95601.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  117 bits (292), Expect = 6e-29
 Identities = 54/77 (70%), Positives = 59/77 (76%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK GS+VG+TKASF  G+KLR+  +T             ADPDRPLWFPGSTPPPWLDGS
Sbjct: 21  QKTGSLVGSTKASFLRGKKLRLRTYTSPTAARSVTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 81  LPGDFGFDPLGLGSDPE 97


>gb|KHG11922.1| Chlorophyll a-b binding 7, chloroplastic [Gossypium arboreum]
          Length = 270

 Score =  116 bits (291), Expect = 9e-29
 Identities = 56/78 (71%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLR-VSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDG 108
           QK GS+VG TKASF  G+KLR V K+T             ADPDRPLWFPGSTPPPWLDG
Sbjct: 21  QKTGSVVGTTKASFLSGKKLRSVRKYTKPAAGPTFPVCAAADPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 81  SLPGDFGFDPLGLGSDPE 98


>ref|XP_002303791.1| chlorophyll a/b-binding protein type II precursor [Populus
           trichocarpa] gi|222841223|gb|EEE78770.1| chlorophyll
           a/b-binding protein type II precursor [Populus
           trichocarpa]
          Length = 269

 Score =  116 bits (290), Expect = 1e-28
 Identities = 54/77 (70%), Positives = 58/77 (75%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXADPDRPLWFPGSTPPPWLDGS 105
           QK GS+VG+TKASF  G KLR+  +T             ADPDRPLWFPGSTPPPWLDGS
Sbjct: 21  QKTGSLVGSTKASFLRGEKLRLRTYTSPTAARSVTVCVAADPDRPLWFPGSTPPPWLDGS 80

Query: 104 LPGDFGFDPLGLGSDPE 54
           LPGDFGFDPLGLGSDPE
Sbjct: 81  LPGDFGFDPLGLGSDPE 97


>ref|XP_003528751.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic [Glycine
           max] gi|734313594|gb|KHN01491.1| Chlorophyll a-b binding
           protein 7, chloroplastic [Glycine soja]
           gi|947099249|gb|KRH47741.1| hypothetical protein
           GLYMA_07G047600 [Glycine max]
          Length = 270

 Score =  116 bits (290), Expect = 1e-28
 Identities = 54/78 (69%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -1

Query: 284 QKNGSIVGATKASFFGGRKLRVSKFTXXXXXXXXXXXXXA-DPDRPLWFPGSTPPPWLDG 108
           QKNGS++G+TKASF  GRKL+V+ FT               +PDRPLWFPGSTPPPWLDG
Sbjct: 21  QKNGSLLGSTKASFLSGRKLKVNSFTAPVGARSSTTVCAVAEPDRPLWFPGSTPPPWLDG 80

Query: 107 SLPGDFGFDPLGLGSDPE 54
           SLPGDFGFDPLGLGSDPE
Sbjct: 81  SLPGDFGFDPLGLGSDPE 98


Top