BLASTX nr result
ID: Rehmannia27_contig00000290
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia27_contig00000290
(791 letters)
Database: ./nr
84,704,028 sequences; 31,038,470,784 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chl... 354 e-118
ref|XP_012841998.1| PREDICTED: RNA pseudouridine synthase 6, chl... 352 e-117
gb|KDO75507.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 293 2e-96
gb|KDO75508.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 293 2e-96
gb|KDO75506.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 293 2e-95
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 293 5e-94
gb|KDO75505.1| hypothetical protein CISIN_1g011530mg [Citrus sin... 293 9e-94
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 293 1e-93
ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chl... 292 1e-93
ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chl... 285 4e-91
ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prun... 283 3e-90
emb|CDP04372.1| unnamed protein product [Coffea canephora] 283 4e-90
ref|XP_007026021.1| Pseudouridine synthase family protein [Theob... 283 4e-90
ref|XP_011652789.1| PREDICTED: RNA pseudouridine synthase 6, chl... 282 8e-90
ref|XP_004151517.2| PREDICTED: RNA pseudouridine synthase 6, chl... 282 9e-90
gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum] 281 2e-89
gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium r... 281 2e-89
ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chl... 281 2e-89
ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chl... 281 3e-89
ref|XP_012444881.1| PREDICTED: RNA pseudouridine synthase 6, chl... 281 3e-89
>ref|XP_011086178.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Sesamum
indicum]
Length = 484
Score = 354 bits (909), Expect = e-118
Identities = 172/222 (77%), Positives = 188/222 (84%)
Frame = -3
Query: 666 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSY 487
RRNFF INLARTLA+T+ FK+IHKHH + A RNLSCE SY
Sbjct: 30 RRNFFTHINLARTLAATNCRFKNIHKHHTLIAGKRNLSCESTASADISTNSSIHISNNSY 89
Query: 486 PPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCP 307
PPYGRLLPCPSQ GPPRVEHLVVS+GGPVLE+IS +LNLPPLFVADLIHFGAVFYALVCP
Sbjct: 90 PPYGRLLPCPSQNGPPRVEHLVVSKGGPVLEYISSALNLPPLFVADLIHFGAVFYALVCP 149
Query: 306 DPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHV 127
DPP SATPEQIK FK++TDP +LR+R+SIKGKT+REAQKTFRIT PDEFVE GTYLRVHV
Sbjct: 150 DPPPSATPEQIKTFKEFTDPSVLRKRASIKGKTVREAQKTFRITRPDEFVEAGTYLRVHV 209
Query: 126 HPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
HPKRFPRCYEIDWRSRI+AVT+ YV+LDKPAGTSVGGTTDNI
Sbjct: 210 HPKRFPRCYEIDWRSRIVAVTDDYVILDKPAGTSVGGTTDNI 251
>ref|XP_012841998.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Erythranthe
guttata] gi|604328238|gb|EYU33906.1| hypothetical
protein MIMGU_mgv1a005451mg [Erythranthe guttata]
Length = 483
Score = 352 bits (903), Expect = e-117
Identities = 173/223 (77%), Positives = 185/223 (82%), Gaps = 1/223 (0%)
Frame = -3
Query: 666 RRNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXS- 490
RRNFFIPINLARTLAST S F+HIHKHH+ NA RN SCE +
Sbjct: 26 RRNFFIPINLARTLASTQSSFRHIHKHHICNAAHRNRSCESTASAYVSTDSSISTSNNNS 85
Query: 489 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 310
YPPYGRLLPCPSQ GPPRVEH VV+EGGPVL++ISKSLN+P FVADLIHFGAVFYALVC
Sbjct: 86 YPPYGRLLPCPSQNGPPRVEHFVVTEGGPVLDYISKSLNIPSPFVADLIHFGAVFYALVC 145
Query: 309 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 130
PDPP +ATPEQI FK+YTDP LLR+RSSIKGKT REAQKTFRI+ DEFVETGTYLRVH
Sbjct: 146 PDPPPTATPEQINFFKEYTDPSLLRKRSSIKGKTFREAQKTFRISRTDEFVETGTYLRVH 205
Query: 129 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHPKRFPRCYE DWRSR+IAV ESYVVLDKPAGTSVGGTTDNI
Sbjct: 206 VHPKRFPRCYETDWRSRVIAVAESYVVLDKPAGTSVGGTTDNI 248
>gb|KDO75507.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 279
Score = 293 bits (749), Expect = 2e-96
Identities = 152/231 (65%), Positives = 175/231 (75%), Gaps = 10/231 (4%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 496
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74
Query: 495 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 334
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 333 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 154
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 153 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
>gb|KDO75508.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
gi|641856743|gb|KDO75509.1| hypothetical protein
CISIN_1g011530mg [Citrus sinensis]
gi|641856744|gb|KDO75510.1| hypothetical protein
CISIN_1g011530mg [Citrus sinensis]
gi|641856745|gb|KDO75511.1| hypothetical protein
CISIN_1g011530mg [Citrus sinensis]
Length = 284
Score = 293 bits (749), Expect = 2e-96
Identities = 152/231 (65%), Positives = 175/231 (75%), Gaps = 10/231 (4%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 496
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74
Query: 495 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 334
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 333 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 154
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 153 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
>gb|KDO75506.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 354
Score = 293 bits (749), Expect = 2e-95
Identities = 152/231 (65%), Positives = 175/231 (75%), Gaps = 10/231 (4%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 496
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74
Query: 495 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 334
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 333 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 154
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 153 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 293 bits (751), Expect = 5e-94
Identities = 152/231 (65%), Positives = 176/231 (76%), Gaps = 10/231 (4%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 496
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTTATAA 74
Query: 495 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 334
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 AATPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 333 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 154
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 153 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW+SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
>gb|KDO75505.1| hypothetical protein CISIN_1g011530mg [Citrus sinensis]
Length = 483
Score = 293 bits (749), Expect = 9e-94
Identities = 152/231 (65%), Positives = 175/231 (75%), Gaps = 10/231 (4%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 496
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74
Query: 495 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 334
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 333 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 154
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 153 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
isoform X1 [Citrus sinensis]
Length = 487
Score = 293 bits (749), Expect = 1e-93
Identities = 152/231 (65%), Positives = 175/231 (75%), Gaps = 10/231 (4%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-SPFKHIHKHHVV---NAVGRNLSCEXXXXXXXXXXXXXXXXX 496
R+ P++L RTLASTH S ++I+K +VV ++ RN CE
Sbjct: 15 RSLGAPVSLLRTLASTHASCHRNIYKSNVVLSFSSSNRNFVCESWKRHVFTHTDTAAIAA 74
Query: 495 XS------YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFG 334
+ YP Y RLLPCPSQ PPRVEHLVVSEGGPVLE+I + LNLPPLFVADLIHFG
Sbjct: 75 ATTPSSYGYPEYHRLLPCPSQNCPPRVEHLVVSEGGPVLEYICRELNLPPLFVADLIHFG 134
Query: 333 AVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVE 154
AV+YALVCP PP +ATPEQ++ FK+ TDP +L +RSSIKGKT+REAQKTFRIT D+ VE
Sbjct: 135 AVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVE 194
Query: 153 TGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW SRIIAVTES+VVLDKPAGTSVGGTTDNI
Sbjct: 195 AGTYLRVHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNI 245
>ref|XP_002264641.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Vitis
vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
product [Vitis vinifera]
Length = 472
Score = 292 bits (747), Expect = 1e-93
Identities = 153/221 (69%), Positives = 171/221 (77%)
Frame = -3
Query: 663 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXSYP 484
R+F P+ LARTLAS++ F HK V N +C YP
Sbjct: 24 RSFGTPVALARTLASSNV-FSRRHKRVVW--CSNNPTCTRELTASSDSANTSSVNG--YP 78
Query: 483 PYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPD 304
Y RLLPCPSQ GPPRVEHLVVSEGG VL++ISK+L+LPPLFVADLIHFGAV+YALVCP+
Sbjct: 79 EYHRLLPCPSQNGPPRVEHLVVSEGGCVLDYISKALDLPPLFVADLIHFGAVYYALVCPE 138
Query: 303 PPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVH 124
PP SATPEQ++ FK+ T P +LR+R SIKGKTIREAQKTFRIT +EFVE GTYLRVHVH
Sbjct: 139 PPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLRVHVH 198
Query: 123 PKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
PKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNI
Sbjct: 199 PKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 239
>ref|XP_008224796.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Prunus
mume]
Length = 469
Score = 285 bits (730), Expect = 4e-91
Identities = 142/228 (62%), Positives = 168/228 (73%), Gaps = 7/228 (3%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH-------SPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXX 505
R+F P+ L RTLA TH + +KH+ + + +
Sbjct: 7 RSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACKSLKQDVTQPTAV 66
Query: 504 XXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVF 325
YP Y RLLPCPS GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGAV+
Sbjct: 67 SSVNGYPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGAVY 126
Query: 324 YALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGT 145
YALVCP PP +ATPEQ++ FK+ T+P +L++R+SIKGKT+REAQKTFRIT DEFVE GT
Sbjct: 127 YALVCPKPPPTATPEQMRVFKEVTEPSVLKKRASIKGKTVREAQKTFRITQADEFVEAGT 186
Query: 144 YLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
YLRVHVHPKRFPRCYEIDW+SRIIAV+E +VVLDKPAGT+VGGTTDNI
Sbjct: 187 YLRVHVHPKRFPRCYEIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNI 234
>ref|XP_007213527.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
gi|462409392|gb|EMJ14726.1| hypothetical protein
PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 283 bits (725), Expect = 3e-90
Identities = 146/230 (63%), Positives = 169/230 (73%), Gaps = 9/230 (3%)
Frame = -3
Query: 663 RNFFIPINLARTLASTH---SPFKHIHKHHVVNAVGRN------LSCEXXXXXXXXXXXX 511
R+F P+ L RTLA TH S + +KH V R+ +CE
Sbjct: 15 RSFSAPVALVRTLALTHVALSEHANNYKHVKVACFSRSSKKRTTFACESLKQGVTQPTSV 74
Query: 510 XXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGA 331
YP Y RLLPCPS GPPRVEHLVVSEGGPVLE+I K+L+LPP FVADLIHFGA
Sbjct: 75 SSVNG--YPEYTRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKTLDLPPQFVADLIHFGA 132
Query: 330 VFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVET 151
V+YALVCP PP +ATPEQ++ FK+ T P +L+ R+SIKGKT+REAQKTFRIT DEFVE
Sbjct: 133 VYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEA 192
Query: 150 GTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
GTYLRVHVHPKRFPRCY+IDW+SRIIAV+E +VVLDKPAGT+VGGTTDNI
Sbjct: 193 GTYLRVHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNI 242
>emb|CDP04372.1| unnamed protein product [Coffea canephora]
Length = 486
Score = 283 bits (725), Expect = 4e-90
Identities = 132/160 (82%), Positives = 147/160 (91%)
Frame = -3
Query: 480 YGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVCPDP 301
YGRLLPCPS+ GPPRVEHLVV EGGPVL++IS SL+LPPLFVADLIHFGAV+YALVCP P
Sbjct: 94 YGRLLPCPSENGPPRVEHLVVKEGGPVLDYISNSLDLPPLFVADLIHFGAVYYALVCPKP 153
Query: 300 PRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVHVHP 121
P SATPEQIK +K+ T P +L+ R+SIKGKT+REAQKT+RIT DEFVE GTYLRVHVHP
Sbjct: 154 PPSATPEQIKTYKEVTAPSVLKNRASIKGKTVREAQKTYRITRADEFVEAGTYLRVHVHP 213
Query: 120 KRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
KRFPRCYEIDWRSRI+A+TESYV+LDKPAGTSVGGTTDNI
Sbjct: 214 KRFPRCYEIDWRSRIVAITESYVILDKPAGTSVGGTTDNI 253
>ref|XP_007026021.1| Pseudouridine synthase family protein [Theobroma cacao]
gi|508781387|gb|EOY28643.1| Pseudouridine synthase
family protein [Theobroma cacao]
Length = 491
Score = 283 bits (725), Expect = 4e-90
Identities = 148/241 (61%), Positives = 172/241 (71%), Gaps = 20/241 (8%)
Frame = -3
Query: 663 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVG--------RNLSC------------EX 544
R+ P++L RTLAST + ++K++ + R LSC
Sbjct: 15 RSLGAPMSLLRTLASTGASLYKLNKNYSKTVLSWSCLGSSRRELSCLSTKMDAAQTASAT 74
Query: 543 XXXXXXXXXXXXXXXXXSYPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPP 364
SYP Y RLLPCPS GPPRVEHLVVSEGGPVLE+I K+L+LPP
Sbjct: 75 SVNGVLLYFMIEIHFLFSYPEYHRLLPCPSHNGPPRVEHLVVSEGGPVLEYICKALDLPP 134
Query: 363 LFVADLIHFGAVFYALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTF 184
+FVADLIHFGAV+YALVCP PP SATPEQI+ FK+ T P +L +R+SI+GKT+REAQKTF
Sbjct: 135 MFVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTF 194
Query: 183 RITSPDEFVETGTYLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDN 4
RIT D+FVE GTYLRVHVHPKRFPRCYEIDW+SRIIAVT+SYVVLDKPAGTSVGGTTDN
Sbjct: 195 RITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDN 254
Query: 3 I 1
I
Sbjct: 255 I 255
>ref|XP_011652789.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X3
[Cucumis sativus]
Length = 475
Score = 282 bits (722), Expect = 8e-90
Identities = 133/163 (81%), Positives = 146/163 (89%)
Frame = -3
Query: 489 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 310
YP Y RLLPCPS PPRVEH+VV E GPV+E+I KSLNLPPL+VADLIHFGAV+YALVC
Sbjct: 76 YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 135
Query: 309 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 130
P PP++ATPEQI+ FKK+T+P L+ R SIKGKT+REAQKTFRIT DEFVE GTYLRVH
Sbjct: 136 PQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 195
Query: 129 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNI
Sbjct: 196 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 238
>ref|XP_004151517.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Cucumis sativus] gi|778658460|ref|XP_011652776.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
isoform X1 [Cucumis sativus] gi|700209445|gb|KGN64541.1|
hypothetical protein Csa_1G064140 [Cucumis sativus]
Length = 479
Score = 282 bits (722), Expect = 9e-90
Identities = 133/163 (81%), Positives = 146/163 (89%)
Frame = -3
Query: 489 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 310
YP Y RLLPCPS PPRVEH+VV E GPV+E+I KSLNLPPL+VADLIHFGAV+YALVC
Sbjct: 80 YPQYHRLLPCPSFSKPPRVEHMVVLEAGPVMEYICKSLNLPPLYVADLIHFGAVYYALVC 139
Query: 309 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 130
P PP++ATPEQI+ FKK+T+P L+ R SIKGKT+REAQKTFRIT DEFVE GTYLRVH
Sbjct: 140 PQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLRVH 199
Query: 129 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHPKRFPRCYEIDW+SRIIAVTESYVVLDKPAGTSVGGTTDNI
Sbjct: 200 VHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNI 242
>gb|KHG01920.1| hypothetical protein F383_22898 [Gossypium arboreum]
Length = 475
Score = 281 bits (720), Expect = 2e-89
Identities = 146/228 (64%), Positives = 170/228 (74%), Gaps = 7/228 (3%)
Frame = -3
Query: 663 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXS-- 490
R+ P++ RTLAS+ ++KH+ N+ G LSC +
Sbjct: 17 RSLGAPVSSWRTLASSS-----LYKHYKRNSKGAVLSCLSSSKIELACLSSEVDVAQTTT 71
Query: 489 -----YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVF 325
Y Y RLLPCPS+ GPPRVEHLVVSEGGPVLE+I KSL+LPPLFVADLIHFGAV+
Sbjct: 72 SSVNGYHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKSLDLPPLFVADLIHFGAVY 131
Query: 324 YALVCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGT 145
YALVCP PP SATPEQI+ FK+ T P +L +R+SIKGKT+REAQKTFRIT ++FVE GT
Sbjct: 132 YALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFRITHFEQFVEAGT 191
Query: 144 YLRVHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
YLRVHVHPKRFPRCYEIDW+SRIIAV +SYVVLDKPAGTSVGGT+DNI
Sbjct: 192 YLRVHVHPKRFPRCYEIDWKSRIIAVADSYVVLDKPAGTSVGGTSDNI 239
>gb|KJB57712.1| hypothetical protein B456_009G176900 [Gossypium raimondii]
gi|763790717|gb|KJB57713.1| hypothetical protein
B456_009G176900 [Gossypium raimondii]
Length = 475
Score = 281 bits (719), Expect = 2e-89
Identities = 148/225 (65%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Frame = -3
Query: 663 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXS-- 490
R+ P++ RTLAS+ S +KH +K + +AV LS +
Sbjct: 17 RSLSAPVSSWRTLASS-SLYKH-YKRNSKSAVFSCLSSSKIELSCLSSKVDVAQTTTTSV 74
Query: 489 --YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYAL 316
Y Y RLLPCPS+ GPPRVEHLVVSEGGPVLE+I KSL+LPPLFVADLIHFGAV+YAL
Sbjct: 75 NGYHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKSLDLPPLFVADLIHFGAVYYAL 134
Query: 315 VCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLR 136
VCP PP SATPEQI+ FK+ T P +L +R+SIKGKT+REAQKTFRIT ++FVE GTYLR
Sbjct: 135 VCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFRITHVEQFVEAGTYLR 194
Query: 135 VHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHVHPKRFPRCYEIDW+SRIIAVT+SYVVLDKPAGTSVGGT+DNI
Sbjct: 195 VHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNI 239
>ref|XP_012444884.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X2
[Gossypium raimondii]
Length = 477
Score = 281 bits (719), Expect = 2e-89
Identities = 148/225 (65%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Frame = -3
Query: 663 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXS-- 490
R+ P++ RTLAS+ S +KH +K + +AV LS +
Sbjct: 19 RSLSAPVSSWRTLASS-SLYKH-YKRNSKSAVFSCLSSSKIELSCLSSKVDVAQTTTTSV 76
Query: 489 --YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYAL 316
Y Y RLLPCPS+ GPPRVEHLVVSEGGPVLE+I KSL+LPPLFVADLIHFGAV+YAL
Sbjct: 77 NGYHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKSLDLPPLFVADLIHFGAVYYAL 136
Query: 315 VCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLR 136
VCP PP SATPEQI+ FK+ T P +L +R+SIKGKT+REAQKTFRIT ++FVE GTYLR
Sbjct: 137 VCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFRITHVEQFVEAGTYLR 196
Query: 135 VHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHVHPKRFPRCYEIDW+SRIIAVT+SYVVLDKPAGTSVGGT+DNI
Sbjct: 197 VHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNI 241
>ref|XP_010267715.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Nelumbo
nucifera]
Length = 484
Score = 281 bits (719), Expect = 3e-89
Identities = 134/163 (82%), Positives = 148/163 (90%)
Frame = -3
Query: 489 YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYALVC 310
YP Y RLLPCP Q GPPR+EHLVVSEGGPVLE+ISK+L+LPPLFVADLIHFGAV+YALVC
Sbjct: 89 YPEYTRLLPCPLQNGPPRIEHLVVSEGGPVLEYISKALDLPPLFVADLIHFGAVYYALVC 148
Query: 309 PDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLRVH 130
P+PP +A PEQI+ +K+ T P +L+ R SIKGKTIREAQKTFRIT +EFVE GTYLRVH
Sbjct: 149 PEPPPNAMPEQIRVYKEVTAPSVLKNRLSIKGKTIREAQKTFRITHINEFVEAGTYLRVH 208
Query: 129 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGT+DNI
Sbjct: 209 VHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTSDNI 251
>ref|XP_012444881.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic isoform X1
[Gossypium raimondii] gi|823224229|ref|XP_012444882.1|
PREDICTED: RNA pseudouridine synthase 6, chloroplastic
isoform X1 [Gossypium raimondii]
gi|823224231|ref|XP_012444883.1| PREDICTED: RNA
pseudouridine synthase 6, chloroplastic isoform X1
[Gossypium raimondii]
Length = 488
Score = 281 bits (719), Expect = 3e-89
Identities = 148/225 (65%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Frame = -3
Query: 663 RNFFIPINLARTLASTHSPFKHIHKHHVVNAVGRNLSCEXXXXXXXXXXXXXXXXXXS-- 490
R+ P++ RTLAS+ S +KH +K + +AV LS +
Sbjct: 19 RSLSAPVSSWRTLASS-SLYKH-YKRNSKSAVFSCLSSSKIELSCLSSKVDVAQTTTTSV 76
Query: 489 --YPPYGRLLPCPSQMGPPRVEHLVVSEGGPVLEFISKSLNLPPLFVADLIHFGAVFYAL 316
Y Y RLLPCPS+ GPPRVEHLVVSEGGPVLE+I KSL+LPPLFVADLIHFGAV+YAL
Sbjct: 77 NGYHKYDRLLPCPSENGPPRVEHLVVSEGGPVLEYICKSLDLPPLFVADLIHFGAVYYAL 136
Query: 315 VCPDPPRSATPEQIKAFKKYTDPLLLRQRSSIKGKTIREAQKTFRITSPDEFVETGTYLR 136
VCP PP SATPEQI+ FK+ T P +L +R+SIKGKT+REAQKTFRIT ++FVE GTYLR
Sbjct: 137 VCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIKGKTVREAQKTFRITHVEQFVEAGTYLR 196
Query: 135 VHVHPKRFPRCYEIDWRSRIIAVTESYVVLDKPAGTSVGGTTDNI 1
VHVHPKRFPRCYEIDW+SRIIAVT+SYVVLDKPAGTSVGGT+DNI
Sbjct: 197 VHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTSDNI 241