BLASTX nr result
ID: Rehmannia26_contig00035104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00035104
(450 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293... 55 3e-13
gb|EMJ20741.1| hypothetical protein PRUPE_ppa022779mg, partial [... 52 3e-11
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 46 5e-10
gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] 48 4e-08
gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indi... 48 4e-08
ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] g... 48 4e-08
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 45 9e-08
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 47 9e-07
gb|EOY02236.1| Uncharacterized protein TCM_011923 [Theobroma cacao] 41 2e-06
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 45 7e-06
>ref|XP_004305774.1| PREDICTED: uncharacterized protein LOC101293221 [Fragaria vesca
subsp. vesca]
Length = 461
Score = 55.1 bits (131), Expect(2) = 3e-13
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = -1
Query: 210 LISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTLLAEI 67
+ ++ +S+PGPDGF G F+Q+CW I+ +DV VR FF LL I
Sbjct: 315 VFAMDASSAPGPDGFPGCFYQSCWDIVGSDVVACVRQFFMQNWLLPNI 362
Score = 45.1 bits (105), Expect(2) = 3e-13
Identities = 25/86 (29%), Positives = 49/86 (56%)
Frame = -3
Query: 448 QTKAA*AGIHGLMSNDTLSMDPSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLD 269
+ ++A A + + + + +PS I +H++ F+++L+++ + P + + VI +V +
Sbjct: 238 KVRSASARMFSIHDGERILFEPSDIVAHVVGFYQNLYSSSSTP-RNLDEVCSVIPSLVTN 296
Query: 268 VENDCLTSFPSELEI*DAVFDLGIGS 191
END LT PS EI +AVF + S
Sbjct: 297 AENDWLTVIPSTEEIKNAVFAMDASS 322
>gb|EMJ20741.1| hypothetical protein PRUPE_ppa022779mg, partial [Prunus persica]
Length = 340
Score = 52.0 bits (123), Expect(2) = 3e-11
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -1
Query: 222 EMRCLI-SVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTLL 76
E+ C++ S+ SSPGPDGF G FF +CW ++ +V AV+ FF G L+
Sbjct: 195 EIFCVVKSMDSLSSPGPDGFGGIFFLHCWSVVGHEVVQAVQSFFIQGLLM 244
Score = 41.6 bits (96), Expect(2) = 3e-11
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -3
Query: 415 LMSNDTLSMDPS-VIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFP 239
L DT+ D +IRSHI+ F+ +FTA + + +D+VI +V +N LTS P
Sbjct: 133 LKDGDTIMDDQDGIIRSHIVNHFQKMFTA-DAEVVNTGLVDRVIPSLVTAEDNMLLTSIP 191
Query: 238 SELEI 224
S+ EI
Sbjct: 192 SQEEI 196
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 45.8 bits (107), Expect(2) = 5e-10
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -1
Query: 210 LISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKS 88
+ S++ + +PGPDGF F+ + W IISTDV +R FF S
Sbjct: 332 VFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTS 372
Score = 43.5 bits (101), Expect(2) = 5e-10
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = -3
Query: 355 FFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPSELEI*DAVFDL 203
+F+ +FT+ + DFS +D+ I P+V +ND LT P++ E+ DAVF +
Sbjct: 287 YFQQIFTSESDG--DFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDAVFSI 335
>gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
Length = 2367
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -1
Query: 216 RCLISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTL 79
+ + + SPGPDGF F+Q WG I D+ AVR FF++G +
Sbjct: 1169 QAIFQIGPLKSPGPDGFPARFYQRNWGTIKADIIGAVRRFFQTGLM 1214
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -3
Query: 409 SNDTLSMDPSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPSEL 230
+N+T+ + S ++F+D++TA P+ T+ ++I V D+ N+ L +E
Sbjct: 1108 ANETVHSSTMKLESMATEYFQDVYTADPNLNPE--TVTRLIQEKVTDIMNEKLCEDFTED 1165
Query: 229 EI*DAVFDLG 200
EI A+F +G
Sbjct: 1166 EISQAIFQIG 1175
>gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
Length = 1765
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -1
Query: 216 RCLISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTL 79
+ + + SPGPDGF F+Q WG I D+ AVR FF++G +
Sbjct: 910 QAIFQIGPLKSPGPDGFPARFYQRNWGTIKADIIGAVRRFFQTGLM 955
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -3
Query: 409 SNDTLSMDPSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPSEL 230
+N+T+ + S ++F+D++TA P+ T+ ++I V D+ N+ L +E
Sbjct: 849 ANETVHSSTMKLESMATEYFQDVYTADPNLNPE--TVTRLIQEKVTDIMNEKLCEDFTED 906
Query: 229 EI*DAVFDLG 200
EI A+F +G
Sbjct: 907 EISQAIFQIG 916
>ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
gi|108862221|gb|ABA96496.2| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza
sativa Japonica Group]
Length = 1764
Score = 47.8 bits (112), Expect(2) = 4e-08
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -1
Query: 216 RCLISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTL 79
+ + + SPGPDGF F+Q WG I D+ AVR FF++G +
Sbjct: 566 QAIFQIGPLKSPGPDGFPARFYQRNWGTIKADIIGAVRRFFQTGLM 611
Score = 35.0 bits (79), Expect(2) = 4e-08
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -3
Query: 409 SNDTLSMDPSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPSEL 230
+N+T+ + S ++F+D++TA P+ T+ ++I V D+ N+ L +E
Sbjct: 505 ANETVHSSTMKLESMATEYFQDVYTADPNLNPE--TVTRLIQEKVTDIMNEKLCEDFTED 562
Query: 229 EI*DAVFDLG 200
EI A+F +G
Sbjct: 563 EISQAIFQIG 572
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
H; Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 44.7 bits (104), Expect(2) = 9e-08
Identities = 19/40 (47%), Positives = 25/40 (62%)
Frame = -1
Query: 186 SPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTLLAEI 67
+PGP+GF G F+Q W I+ DV +V+ FF SG L I
Sbjct: 459 APGPNGFGGHFYQTYWDIVGADVIQSVQDFFISGQLAQNI 498
Score = 37.0 bits (84), Expect(2) = 9e-08
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -3
Query: 415 LMSNDTLSMDPSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPS 236
L D + DP+ I H++ +F+ +F+ I + +D + S +V +V+N+ L P
Sbjct: 385 LQDGDAVITDPARIEVHVLNYFQAIFSVDNSCIQNDLVVDTIPS-LVSNVDNNSLLRLPL 443
Query: 235 ELEI*DAVFDL 203
E+ +AVF L
Sbjct: 444 WGEVKNAVFTL 454
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 46.6 bits (109), Expect(2) = 9e-07
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = -1
Query: 210 LISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTL 79
L S+S +PGPDGF+ SFF W II DV+ +R FF L
Sbjct: 378 LFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCL 421
Score = 31.6 bits (70), Expect(2) = 9e-07
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = -3
Query: 376 IRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPSELEI*DAVFDL 203
I S I +F+++FT T D + + +SP++ N+ L S LEI +A+F +
Sbjct: 326 IASTISSYFQNIFT--TSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSI 381
>gb|EOY02236.1| Uncharacterized protein TCM_011923 [Theobroma cacao]
Length = 1954
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = -1
Query: 210 LISVSVASSPGPDGFNGSFFQNCWGIISTDVTVAVRHFF 94
+ ++ S GPDGF+ F+Q+CW II D+ AV FF
Sbjct: 1026 VFNIDKDSVAGPDGFSSLFYQHCWDIIKQDLLEAVLDFF 1064
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -3
Query: 409 SNDTLSMDPSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDV-ENDCLTSFPSE 233
S + DP I++ +Q+F++L TA DFS D + P + + +N+ L + PS
Sbjct: 963 SEGNIYEDPQYIQNSAVQYFQNLLTAEQ---CDFSRFDPSLIPRTISITDNEFLCAAPSL 1019
Query: 232 LEI*DAVFDL 203
EI + VF++
Sbjct: 1020 KEIKEVVFNI 1029
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 44.7 bits (104), Expect(2) = 7e-06
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = -1
Query: 186 SPGPDGFNGSFFQNCWGIISTDVTVAVRHFFKSGTLLAEI 67
SPGPDGF FFQ W +I V AV+ FF SG +L E+
Sbjct: 461 SPGPDGFPPYFFQKYWTLIGKSVCRAVQAFFHSGYMLKEV 500
Score = 30.4 bits (67), Expect(2) = 7e-06
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -3
Query: 385 PSVIRSHIIQFFEDLFTARTGPIPDFSTIDQVISPVVLDVENDCLTSFPSELEI*DAVFD 206
P +I I F+ F + + + ++SP+V + +N LTS S EI +AVFD
Sbjct: 396 PDLIEKEITLAFKKRFISNPACKFNQNVDFNLLSPIVSEADNAYLTSAVSPEEIKNAVFD 455
Query: 205 L 203
L
Sbjct: 456 L 456