BLASTX nr result

ID: Rehmannia26_contig00034399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00034399
         (566 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63046.1| hypothetical protein VITISV_004835 [Vitis vinifera]    65   9e-09
ref|XP_002513832.1| conserved hypothetical protein [Ricinus comm...    57   4e-06

>emb|CAN63046.1| hypothetical protein VITISV_004835 [Vitis vinifera]
          Length = 251

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
 Frame = -3

Query: 501 EYCKGPGHEIHSCFKLHGYPDWFKSLKEQRGKLS---RVNMVD*VGSSNFKPGQTFEGHH 331
           +YC   GH   +CFKLHGY DWF+ L+EQ+ K+      N++D     +    Q  +   
Sbjct: 91  DYCNTNGHVRDTCFKLHGYLDWFRQLQEQKEKVPSKLTANVID--TPLDVVCDQKTDKDV 148

Query: 330 SNNSEMSNIIQQEVAKYLSGRMMGGGHINSDPNLNFAHFADYAG 199
              S ++ IIQQE+AKY+ G+    G+      +N AHF + AG
Sbjct: 149 ELKSSIALIIQQEIAKYMKGKSAMDGNY-----INLAHFGELAG 187


>ref|XP_002513832.1| conserved hypothetical protein [Ricinus communis]
           gi|223546918|gb|EEF48415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 21/49 (42%), Positives = 34/49 (69%)
 Frame = -3

Query: 528 KEEKAKLVCEYCKGPGHEIHSCFKLHGYPDWFKSLKEQRGKLSRVNMVD 382
           K++K    C++C+  GHE  +CFK+HG PDW+K L+EQ+ K +  +M +
Sbjct: 109 KKDKENKFCDHCRTKGHERDTCFKIHGVPDWYKELREQQKKEATKSMAN 157


Top