BLASTX nr result

ID: Rehmannia26_contig00034320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00034320
         (488 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006392428.1| hypothetical protein EUTSA_v10023798mg [Eutr...    51   2e-09
ref|XP_006392192.1| hypothetical protein EUTSA_v10024098mg, part...    51   1e-07

>ref|XP_006392428.1| hypothetical protein EUTSA_v10023798mg [Eutrema salsugineum]
           gi|557088934|gb|ESQ29714.1| hypothetical protein
           EUTSA_v10023798mg [Eutrema salsugineum]
          Length = 1031

 Score = 51.2 bits (121), Expect(2) = 2e-09
 Identities = 27/65 (41%), Positives = 43/65 (66%)
 Frame = -1

Query: 203 SEPSE*FQASSKINRLVWNQQQNLQIVHSPNLNTVKHLSRSRFNASPLYYWNIDENTEHE 24
           SE SE   ++ +INRL     Q+ QI+ +P+L  ++ + +SRFN+S +Y WNID  +E+ 
Sbjct: 406 SETSE-QNSTPEINRLGRENHQDHQIIFAPDLGQIQTIEQSRFNSSSVYDWNIDGISEYN 464

Query: 23  ILSML 9
           IL+ L
Sbjct: 465 ILNFL 469



 Score = 35.8 bits (81), Expect(2) = 2e-09
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
 Frame = -3

Query: 465 VNTIRKQLDRIERRSKT---TSYNYKFLRY*T*NPIFKPYHISQNSIVVFKIT------- 316
           + TI KQLDRIE+  +    TS +    +  T  PIFKP+ IS +S+  ++ T       
Sbjct: 307 LGTIGKQLDRIEKSIQNQPITSIDSTSEKK-TKKPIFKPFQISSSSVKTYQETNKEFIRA 365

Query: 315 IQDQLSKI 292
           +Q QLSKI
Sbjct: 366 LQSQLSKI 373


>ref|XP_006392192.1| hypothetical protein EUTSA_v10024098mg, partial [Eutrema
           salsugineum] gi|557088698|gb|ESQ29478.1| hypothetical
           protein EUTSA_v10024098mg, partial [Eutrema salsugineum]
          Length = 685

 Score = 51.2 bits (121), Expect(2) = 1e-07
 Identities = 27/65 (41%), Positives = 43/65 (66%)
 Frame = -1

Query: 203 SEPSE*FQASSKINRLVWNQQQNLQIVHSPNLNTVKHLSRSRFNASPLYYWNIDENTEHE 24
           SE SE   ++ +INRL     Q+ QI+ +P+L  ++ + +SRFN+S +Y WNID  +E+ 
Sbjct: 213 SETSE-QNSTPEINRLGRENHQDHQIISAPDLGQIQTIEQSRFNSSSVYDWNIDGISEYN 271

Query: 23  ILSML 9
           IL+ L
Sbjct: 272 ILNFL 276



 Score = 30.0 bits (66), Expect(2) = 1e-07
 Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
 Frame = -3

Query: 459 TIRKQLDRIER---RSKTTSYNYKFLRY*T*NPIFKPYHISQNSIVVFK-------ITIQ 310
           TI KQLDRIE+       TS +    +  T  PIFK + IS +S+  ++         +Q
Sbjct: 116 TIGKQLDRIEKLIQNQHITSIDSTSEKK-TKKPIFKHFQISSSSVKTYQEMNKEFIRALQ 174

Query: 309 DQLSKI 292
            QLSKI
Sbjct: 175 SQLSKI 180


Top