BLASTX nr result

ID: Rehmannia26_contig00033759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00033759
         (599 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350419.1| PREDICTED: F-box protein PP2-B10-like [Solan...    58   2e-06
ref|XP_004237583.1| PREDICTED: F-box protein PP2-B11-like [Solan...    57   3e-06
ref|XP_006371767.1| hypothetical protein POPTR_0018s02850g [Popu...    57   5e-06
ref|XP_006371689.1| hypothetical protein POPTR_0018s00200g, part...    57   5e-06

>ref|XP_006350419.1| PREDICTED: F-box protein PP2-B10-like [Solanum tuberosum]
          Length = 238

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
 Frame = +2

Query: 23  IEATIKTQMLSPYTSYGAVLVFGSTADSPESHKANTTIRLLPGDPDDCTRKQDCVVHF-- 196
           I   I T+MLS  TSY A LVF               +R    + D   +K+  VVHF  
Sbjct: 121 IRGKIGTRMLSKRTSYCAYLVFKLEDGFYGLINVKAVVRFADTESDHEVKKRAKVVHFSE 180

Query: 197 -----QTGIVRTDEWMEVALGYIYVGEGDSIEIKVKLAAWNDYWKSCILIEGIELRP 352
                +  ++R+D WME+ +G  +   G+  +++ +L      WK  ++++GIE RP
Sbjct: 181 QGSRARPPLIRSDGWMELKMGNFFNDTGEDGDVEARLMQIRQNWKHGLIVQGIEFRP 237


>ref|XP_004237583.1| PREDICTED: F-box protein PP2-B11-like [Solanum lycopersicum]
          Length = 256

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
 Frame = +2

Query: 23  IEATIKTQMLSPYTSYGAVLVFGSTADSPESHKANTTIRLLPGDPDDCTRKQDCVVHFQ- 199
           I   I T+MLS  TSY A LVF               +R    + D   R++  VVHF  
Sbjct: 139 IRGKIGTRMLSKRTSYCAYLVFKLEDRFYGLTNVKAVVRFADRESDHDVRERAKVVHFSG 198

Query: 200 ------TGIVRTDEWMEVALGYIYVGEGDSIEIKVKLAAWNDYWKSCILIEGIELRP 352
                   ++R+D WME+ +G  +   G+   ++ +L      WK  ++++GIE RP
Sbjct: 199 EGSGATLPLIRSDGWMELKMGNFFNDRGEDGAVEARLMQTRQTWKHGLIVQGIEFRP 255


>ref|XP_006371767.1| hypothetical protein POPTR_0018s02850g [Populus trichocarpa]
           gi|550317904|gb|ERP49564.1| hypothetical protein
           POPTR_0018s02850g [Populus trichocarpa]
          Length = 290

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
 Frame = +2

Query: 23  IEATIKTQMLSPYTSYGAVLVF--GSTADSPESHKANTTIRLLPGDPDDCTRKQDCVVHF 196
           I   I T +LSP T Y A LVF   S  D  ++   + T++L  G+    T   +    F
Sbjct: 157 IRGKINTCLLSPATLYTAYLVFKFASRIDGLDNQPVDVTMKLNEGECGAQTVSWNAHGRF 216

Query: 197 QTGIV-----------RTDEWMEVALGYIYVGEGDSIEIKVKLAAWNDYWKSCILIEGIE 343
           ++  V           R D W+E+ LG  +  +G+  E++++L   + +WK  +++EGIE
Sbjct: 217 RSTSVTVRGKVHYPKERGDGWLEMELGEFFSMKGEDGELEIRLCDASGHWKRGLIVEGIE 276

Query: 344 LRP 352
           +RP
Sbjct: 277 IRP 279


>ref|XP_006371689.1| hypothetical protein POPTR_0018s00200g, partial [Populus
           trichocarpa] gi|550317688|gb|ERP49486.1| hypothetical
           protein POPTR_0018s00200g, partial [Populus trichocarpa]
          Length = 179

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
 Frame = +2

Query: 23  IEATIKTQMLSPYTSYGAVLVF--GSTADSPESHKANTTIRLLPGDPDDCTRKQDCVVHF 196
           I   I T +LSP T Y A LVF   S  D  ++   + T++L  G+    T   +    F
Sbjct: 55  IRGKINTCLLSPATLYTAYLVFKFASRIDGLDNQPVDVTMKLNEGECGAQTVSWNAHGRF 114

Query: 197 QTGIV-----------RTDEWMEVALGYIYVGEGDSIEIKVKLAAWNDYWKSCILIEGIE 343
           ++  V           R D W+E+ LG  +  +G+  E++++L   + +WK  +++EGIE
Sbjct: 115 RSTSVTVRGKVHYPKERGDGWLEMELGEFFSMKGEDGELEIRLCDASGHWKRGLIVEGIE 174

Query: 344 LRP 352
           +RP
Sbjct: 175 IRP 177


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