BLASTX nr result

ID: Rehmannia26_contig00033744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00033744
         (613 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]    45   5e-08
gb|AAO73523.1| gag-pol polyprotein [Glycine max]                       42   5e-06
gb|AAO73527.1| gag-pol polyprotein [Glycine max]                       42   5e-06
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                       42   5e-06

>emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera]
          Length = 956

 Score = 45.1 bits (105), Expect(2) = 5e-08
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
 Frame = +2

Query: 263 DSNAEHNVTASEPIKETNDPILDHGRDIPT-----RI*KNHPTSEIISNATDSIKTRGKG 427
           + + +  ++  E  K+      D GR  P+     R+ KNHP S +I N  DS+ TR + 
Sbjct: 419 EKSKDEKLSEDEEKKDEQGKKGDRGRIEPSKKNKSRVPKNHPLSNVIGNYEDSMVTRRQS 478

Query: 428 KVNYRDMVRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541
           K+N    V               C+ S  EPKNV EAL
Sbjct: 479 KLNEVSYV---------------CYTSQIEPKNVEEAL 501



 Score = 38.1 bits (87), Expect(2) = 5e-08
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = +3

Query: 546 DEFWIHAMQEELDQFVKNDVWF 611
           DE W+ A+ EEL+QF +NDVWF
Sbjct: 503 DEAWVDALHEELNQFSRNDVWF 524


>gb|AAO73523.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 546  DEFWIHAMQEELDQFVKNDVW 608
            DEFWI+AMQEEL+QF +N+VW
Sbjct: 1077 DEFWINAMQEELEQFKRNEVW 1097



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 31/91 (34%), Positives = 41/91 (45%)
 Frame = +2

Query: 269  NAEHNVTASEPIKETNDPILDHGRDIPTRI*KNHPTSEIISNATDSIKTRGKGKVNYRDM 448
            NAE++ +A++     N P     +   TRI K HP   II +    + TR +        
Sbjct: 1006 NAENSDSATDE-SNINQP----DKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------- 1053

Query: 449  VRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541
            V +V  S         CFVS  EPKNV EAL
Sbjct: 1054 VEIVSNS---------CFVSKIEPKNVKEAL 1075


>gb|AAO73527.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 546  DEFWIHAMQEELDQFVKNDVW 608
            DEFWI+AMQEEL+QF +N+VW
Sbjct: 1077 DEFWINAMQEELEQFKRNEVW 1097



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 31/91 (34%), Positives = 41/91 (45%)
 Frame = +2

Query: 269  NAEHNVTASEPIKETNDPILDHGRDIPTRI*KNHPTSEIISNATDSIKTRGKGKVNYRDM 448
            NAE++ +A++     N P     +   TRI K HP   II +    + TR +        
Sbjct: 1006 NAENSDSATDE-SNINQP----DKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------- 1053

Query: 449  VRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541
            V +V  S         CFVS  EPKNV EAL
Sbjct: 1054 VEIVSNS---------CFVSKIEPKNVKEAL 1075


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score = 42.0 bits (97), Expect(2) = 5e-06
 Identities = 16/21 (76%), Positives = 20/21 (95%)
 Frame = +3

Query: 546  DEFWIHAMQEELDQFVKNDVW 608
            DEFWI+AMQEEL+QF +N+VW
Sbjct: 1075 DEFWINAMQEELEQFKRNEVW 1095



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 31/91 (34%), Positives = 41/91 (45%)
 Frame = +2

Query: 269  NAEHNVTASEPIKETNDPILDHGRDIPTRI*KNHPTSEIISNATDSIKTRGKGKVNYRDM 448
            NAE++ +A++     N P     +   TRI K HP   II +    + TR +        
Sbjct: 1004 NAENSDSATDE-SNINQP----DKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------- 1051

Query: 449  VRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541
            V +V  S         CFVS  EPKNV EAL
Sbjct: 1052 VEIVSNS---------CFVSKIEPKNVKEAL 1073