BLASTX nr result
ID: Rehmannia26_contig00033744
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia26_contig00033744 (613 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera] 45 5e-08 gb|AAO73523.1| gag-pol polyprotein [Glycine max] 42 5e-06 gb|AAO73527.1| gag-pol polyprotein [Glycine max] 42 5e-06 gb|AAO73521.1| gag-pol polyprotein [Glycine max] 42 5e-06 >emb|CAN62791.1| hypothetical protein VITISV_024905 [Vitis vinifera] Length = 956 Score = 45.1 bits (105), Expect(2) = 5e-08 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%) Frame = +2 Query: 263 DSNAEHNVTASEPIKETNDPILDHGRDIPT-----RI*KNHPTSEIISNATDSIKTRGKG 427 + + + ++ E K+ D GR P+ R+ KNHP S +I N DS+ TR + Sbjct: 419 EKSKDEKLSEDEEKKDEQGKKGDRGRIEPSKKNKSRVPKNHPLSNVIGNYEDSMVTRRQS 478 Query: 428 KVNYRDMVRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541 K+N V C+ S EPKNV EAL Sbjct: 479 KLNEVSYV---------------CYTSQIEPKNVEEAL 501 Score = 38.1 bits (87), Expect(2) = 5e-08 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +3 Query: 546 DEFWIHAMQEELDQFVKNDVWF 611 DE W+ A+ EEL+QF +NDVWF Sbjct: 503 DEAWVDALHEELNQFSRNDVWF 524 >gb|AAO73523.1| gag-pol polyprotein [Glycine max] Length = 1576 Score = 42.0 bits (97), Expect(2) = 5e-06 Identities = 16/21 (76%), Positives = 20/21 (95%) Frame = +3 Query: 546 DEFWIHAMQEELDQFVKNDVW 608 DEFWI+AMQEEL+QF +N+VW Sbjct: 1077 DEFWINAMQEELEQFKRNEVW 1097 Score = 34.3 bits (77), Expect(2) = 5e-06 Identities = 31/91 (34%), Positives = 41/91 (45%) Frame = +2 Query: 269 NAEHNVTASEPIKETNDPILDHGRDIPTRI*KNHPTSEIISNATDSIKTRGKGKVNYRDM 448 NAE++ +A++ N P + TRI K HP II + + TR + Sbjct: 1006 NAENSDSATDE-SNINQP----DKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------- 1053 Query: 449 VRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541 V +V S CFVS EPKNV EAL Sbjct: 1054 VEIVSNS---------CFVSKIEPKNVKEAL 1075 >gb|AAO73527.1| gag-pol polyprotein [Glycine max] Length = 1576 Score = 42.0 bits (97), Expect(2) = 5e-06 Identities = 16/21 (76%), Positives = 20/21 (95%) Frame = +3 Query: 546 DEFWIHAMQEELDQFVKNDVW 608 DEFWI+AMQEEL+QF +N+VW Sbjct: 1077 DEFWINAMQEELEQFKRNEVW 1097 Score = 34.3 bits (77), Expect(2) = 5e-06 Identities = 31/91 (34%), Positives = 41/91 (45%) Frame = +2 Query: 269 NAEHNVTASEPIKETNDPILDHGRDIPTRI*KNHPTSEIISNATDSIKTRGKGKVNYRDM 448 NAE++ +A++ N P + TRI K HP II + + TR + Sbjct: 1006 NAENSDSATDE-SNINQP----DKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------- 1053 Query: 449 VRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541 V +V S CFVS EPKNV EAL Sbjct: 1054 VEIVSNS---------CFVSKIEPKNVKEAL 1075 >gb|AAO73521.1| gag-pol polyprotein [Glycine max] Length = 1574 Score = 42.0 bits (97), Expect(2) = 5e-06 Identities = 16/21 (76%), Positives = 20/21 (95%) Frame = +3 Query: 546 DEFWIHAMQEELDQFVKNDVW 608 DEFWI+AMQEEL+QF +N+VW Sbjct: 1075 DEFWINAMQEELEQFKRNEVW 1095 Score = 34.3 bits (77), Expect(2) = 5e-06 Identities = 31/91 (34%), Positives = 41/91 (45%) Frame = +2 Query: 269 NAEHNVTASEPIKETNDPILDHGRDIPTRI*KNHPTSEIISNATDSIKTRGKGKVNYRDM 448 NAE++ +A++ N P + TRI K HP II + + TR + Sbjct: 1004 NAENSDSATDE-SNINQP----DKRSSTRIQKMHPKELIIGDPNRGVTTRSRE------- 1051 Query: 449 VRMVCMSADCINMRTFCFVSNFEPKNVVEAL 541 V +V S CFVS EPKNV EAL Sbjct: 1052 VEIVSNS---------CFVSKIEPKNVKEAL 1073