BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00033601
         (407 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containi...    71   2e-10
gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily p...    68   1e-09
gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]      67   2e-09
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_004301846.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
gb|EMJ28416.1| hypothetical protein PRUPE_ppa019183mg [Prunus pe...    58   2e-06
ref|XP_006473572.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citr...    56   6e-06
ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06

>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Solanum lycopersicum]
          Length = 884

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 10/112 (8%)
 Frame = +2

Query: 101 METIILPCKTIVPSRILENPAKSQITSR-------NTPPKLTNDVYLKRLCKLGRLSEAI 259
           ME++ILPCK+I P+ I E P      ++       NT      D +L  LCK GRLSEAI
Sbjct: 1   MESVILPCKSIFPT-ISELPQNHHPKTKVPINFVPNTEESRLTDTHLDYLCKNGRLSEAI 59

Query: 260 SLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           + L+S    G  V+  T S LIESCI+  SL L   LH  +  L++  DPF+
Sbjct: 60  TTLESISQYGYKVKTETFSRLIESCINEKSLYLGRKLHKEMNILLEKVDPFI 111


>ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Solanum tuberosum]
          Length = 884

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
 Frame = +2

Query: 101 METIILPCKTIVPSRILENPAKSQITSR-------NTPPKLTNDVYLKRLCKLGRLSEAI 259
           ME++ILPCK+I P+ I E P      ++       NT      D +L  LCK GRLSEAI
Sbjct: 1   MESVILPCKSIFPT-ISELPQNYHPKTKVPINFVPNTEQSRFTDTHLDYLCKKGRLSEAI 59

Query: 260 SLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           + L+S    G  V+  T S LIESCI+  SL L   LH  +  L+   DPF+
Sbjct: 60  TTLESISQYGYKVKTETFSRLIESCINEKSLYLGRKLHKEMNFLLAKVDPFI 111


>gb|EOY14874.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
           [Theobroma cacao] gi|508722978|gb|EOY14875.1|
           Pentatricopeptide repeat (PPR-like) superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 890

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 15/117 (12%)
 Frame = +2

Query: 101 METIILPCKT----IVP------SRILENPAKSQI--TSRNTPPKLTNDVYLKRLCKLGR 244
           ME +++PC +    I+P      S   + P K     T +   PK++ D +L  L + GR
Sbjct: 1   MENLMIPCTSKPPVIIPTKHENLSEFSQTPTKLAFSNTKKTNNPKIS-DSHLNYLSRNGR 59

Query: 245 LSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           L+EAI+ LDS    GS VR NT  +L+++CID  SL+L   LHARV  L+K  DPF+
Sbjct: 60  LTEAITALDSIAQSGSQVRANTFINLLQACIDFGSLELGRKLHARV-HLVKESDPFV 115


>gb|EXB97347.1| hypothetical protein L484_024210 [Morus notabilis]
          Length = 880

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 6/108 (5%)
 Frame = +2

Query: 101 METIILPCKTIVPSRILENPAKSQITSRNT-PPKLTNDVYLKRLCKLGRLSEAISLLDSC 277
           ME +I+PC    P  +   P K+ I   +     ++ D +L +LC+ GRLS+A++ LD+ 
Sbjct: 1   MENVIIPCNLKPPPVLPIIPTKAGIIQPSEFSTTISFDSHLDKLCRDGRLSDAVAALDAI 60

Query: 278 ---GSTVRRN--TLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
              GS V+    T  +L++SCIDTNS++L   LHAR+  L+++ +PF+
Sbjct: 61  AERGSKVKLKPRTYMNLLQSCIDTNSIELGRKLHARMMGLVQYVNPFV 108


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 20/122 (16%)
 Frame = +2

Query: 101 METIILPCKTIVP--------------SRILENPAKSQITSRNTPPKL---TNDVYLKRL 229
           ME +ILPCK+  P              SRI++         +   PKL     D +L  L
Sbjct: 1   MENLILPCKSRPPLATPSKQGTSFECSSRIIQPRVSFTKIHQPLTPKLKPKVTDAHLNHL 60

Query: 230 CKLGRLSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDP 400
           CK GRL++AI+ LD+    GS V+ NT   L++SCID  S +L   LHAR+  L++  +P
Sbjct: 61  CKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCIDQGSAELGRKLHARI-GLLEEMNP 119

Query: 401 FL 406
           F+
Sbjct: 120 FV 121


>ref|XP_004301846.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Fragaria vesca subsp. vesca]
          Length = 892

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
 Frame = +2

Query: 101 METIILPCKT-----IVPSRILENPAKSQITSRNTP---PKLTNDVYLKRLCKLGRLSEA 256
           ME   LPCK+     I+PS+      K  +T  N P   P L  +++L  LCK G+L++A
Sbjct: 1   MENFTLPCKSNPLIPIIPSKPGRPTTKPTLTFSNKPRQNPPLVQNLHL--LCKTGQLADA 58

Query: 257 ISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           +++LDS    GS +   T  +L++SCID+NS+ L   LH RV   +    PF+
Sbjct: 59  VAVLDSIAQTGSKLPAATYMNLLQSCIDSNSIHLGRKLH-RVIHAVDDVTPFV 110


>gb|EMJ28416.1| hypothetical protein PRUPE_ppa019183mg [Prunus persica]
          Length = 882

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 3/76 (3%)
 Frame = +2

Query: 188 TPPKLTNDVYLKRLCKLGRLSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYN 358
           T PK T D +L  LCK G+ SEAI++LDS    GS V   T  +L++SCIDTNS+ L   
Sbjct: 35  TLPKFT-DTHLNYLCKNGQFSEAITVLDSIAQIGSKVPPTTYMNLLQSCIDTNSIQLGRK 93

Query: 359 LHARVKKLIKHPDPFL 406
           LH  +  L++  +PF+
Sbjct: 94  LHEHI-DLVEEINPFV 108


>ref|XP_006473572.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like isoform X2 [Citrus sinensis]
          Length = 1252

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
 Frame = +2

Query: 209 DVYLKRLCKLGRLSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHA 367
           D +L  LC  GRL+EAI++LDS    G+ VRRNT  +L+++CID+NS+ L   LHA
Sbjct: 47  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA 102


>ref|XP_006435073.1| hypothetical protein CICLE_v10000229mg [Citrus clementina]
           gi|557537195|gb|ESR48313.1| hypothetical protein
           CICLE_v10000229mg [Citrus clementina]
          Length = 889

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
 Frame = +2

Query: 209 DVYLKRLCKLGRLSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHA 367
           D +L  LC  GRL+EAI++LDS    G+ VRRNT  +L+++CID+NS+ L   LHA
Sbjct: 47  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA 102


>ref|XP_006575412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like isoform X1 [Glycine max]
           gi|571441335|ref|XP_006575413.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g19720-like isoform X2 [Glycine max]
          Length = 896

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 3/92 (3%)
 Frame = +2

Query: 140 SRILENPAKSQITSRNTPPKLTNDVYLKRLCKLGRLSEAISLLDSC---GSTVRRNTLSH 310
           +R+L N     IT R+ P  +  D  L +LC  G LSEA+++LDS    GS VR  T  +
Sbjct: 32  TRVLANSNSVSITQRSNPKLI--DTQLNQLCANGPLSEAVAILDSLAQQGSKVRPITFMN 89

Query: 311 LIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           L+++CID + + +   LHAR+  L+   +PF+
Sbjct: 90  LLQACIDKDCILVGRELHARI-GLVGKVNPFV 120


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
 Frame = +2

Query: 101 METIILPCKT---------IVPSRILENPAKSQITSRNTPPKLT---NDVYLKRLCKLGR 244
           ME + +PC+T         ++  R L+  +K   TS     KLT   ND +L  LC  G 
Sbjct: 1   MEKLAIPCQTNPPISGPASVIKPRPLKFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGL 60

Query: 245 LSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           L EAI+ +DS    GS +  NT  +L+++CID  S++L   LH R+  L+   +PF+
Sbjct: 61  LREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRM-GLVHRVNPFV 116


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
 Frame = +2

Query: 101 METIILPCKT---------IVPSRILENPAKSQITSRNTPPKLT---NDVYLKRLCKLGR 244
           ME + +PC+T         ++  R L+  +K   TS     KLT   ND +L  LC  G 
Sbjct: 1   MEKLAIPCQTNPPISGPASVIKPRPLKFSSKPIKTSIFFTYKLTSKFNDDHLSYLCSNGL 60

Query: 245 LSEAISLLDSC---GSTVRRNTLSHLIESCIDTNSLDLCYNLHARVKKLIKHPDPFL 406
           L EAI+ +DS    GS +  NT  +L+++CID  S++L   LH R+  L+   +PF+
Sbjct: 61  LREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIELGRELHVRM-GLVHRVNPFV 116