BLASTX nr result

ID: Rehmannia26_contig00033554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00033554
         (398 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   1e-08
ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622...    64   2e-08
ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612...    62   6e-08
ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617...    59   5e-07
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291...    58   1e-06
ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623...    57   2e-06
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    57   3e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    56   6e-06
ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617...    55   7e-06
ref|XP_002525878.1| conserved hypothetical protein [Ricinus comm...    55   1e-05

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
 Frame = +3

Query: 6    EFVSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETEKSVP-STHTSH 182
            E+ +LF  + W +W   RN  VF+ KKL  Q V   A + + E++ E   + P  T  +H
Sbjct: 1148 EWWALFWMICWNIWLG-RNKWVFEKKKLAFQEVVERAVRGVMEFEEECAHTSPVETLNTH 1206

Query: 183  ATEWIPPPINFAKANSDASVVRGKGTGIGVVIRDHNGRII 302
               W  PP+   K N DA+V +  G G+G V+RD  G ++
Sbjct: 1207 ENGWSVPPVGMVKLNVDAAVFKHVGIGMGGVVRDAEGDVL 1246


>ref|XP_006485451.1| PREDICTED: uncharacterized protein LOC102622884 [Citrus sinensis]
          Length = 1160

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/111 (37%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
 Frame = +3

Query: 12   VSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETEKSVPSTHTSHATE 191
            V LFA +LWA W A RN  +F+ K+   Q V + A   M  Y+R      PS   SH  +
Sbjct: 907  VDLFAVMLWAKWNA-RNQWLFKGKRENPQSVVAKAEAVMEAYKRVQ----PSADVSHGKQ 961

Query: 192  -------WIPPPINFAKANSDASVVRGKG-TGIGVVIRDHNGRIIRTISKL 320
                   W PP   F K N+DA+    K   G+G VIRD NG++  T  K+
Sbjct: 962  QKVAQLGWNPPQEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIKV 1012


>ref|XP_006492749.1| PREDICTED: uncharacterized protein LOC102612946 [Citrus sinensis]
          Length = 589

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/106 (37%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
 Frame = +3

Query: 12  VSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETEK---SVPSTHTSH 182
           V   A + W  W+A RN L+FQ KKL   G  +     M  YQ +  K   S  +T    
Sbjct: 369 VDYVATIWWVAWHA-RNKLLFQGKKLDPIGSVAKGKTVMEVYQAQQVKERESHRNTVKGK 427

Query: 183 ATEWIPPPINFAKANSDASVVRG-KGTGIGVVIRDHNGRIIRTISK 317
              W PPP N  K N DA+V    K  G+GVVIR+H G+++    K
Sbjct: 428 MQIWTPPPNNKVKVNVDAAVKEDRKSAGLGVVIRNHRGQVLAAAVK 473


>ref|XP_006471930.1| PREDICTED: uncharacterized protein LOC102617744 [Citrus sinensis]
          Length = 294

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 4/93 (4%)
 Frame = +3

Query: 36  WALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETEKS---VPSTHTSHATEWIPPP 206
           WA+W+A RN L+F+ KK+      + A   +  YQR  +     + +T       W PPP
Sbjct: 82  WAIWFA-RNKLIFERKKIEPIVSAAKAESMLEAYQRVRKTGTLHISNTREESQQRWSPPP 140

Query: 207 INFAKANSDASV-VRGKGTGIGVVIRDHNGRII 302
            N  K N DA+   + +  G+G V+RD NGR++
Sbjct: 141 TNVLKLNVDAATNSKDQKVGLGAVLRDSNGRVV 173


>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
            subsp. vesca]
          Length = 948

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
 Frame = +3

Query: 9    FVSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETEKSVPSTHTSHA- 185
            F++ ++ ++W +W  +R   V++   +  +   S A+   NE++      + +T+ S   
Sbjct: 719  FLTSWSFIVWCIW-KSRCAFVYRGVSVCPRFTISSASLLENEFRSANVPVLGTTNHSPPE 777

Query: 186  ---TEWIPPPINFAKANSDASVVRGKGTGIGVVIRDHNGRII 302
               T W PPP+ + K NSDA+ +     G+GV+IRD +GR+I
Sbjct: 778  TIPTTWSPPPVGWVKVNSDAAWLPSSSAGLGVIIRDSSGRVI 819


>ref|XP_006491602.1| PREDICTED: uncharacterized protein LOC102623801 [Citrus sinensis]
          Length = 441

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = +3

Query: 12  VSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQR---ETEKSVPSTHTSH 182
           + L   L W +WY+ RNL +F+ K+   Q   + A   ++ ++R    + K +     + 
Sbjct: 220 LELIVVLCWTIWYS-RNLFIFENKREDSQLSIARAEANLDSFRRIKKPSSKILEKQQRNR 278

Query: 183 ATEWIPPPINFAKANSDASV-VRGKGTGIGVVIRDHNGRII 302
              W PPP  + K N DA+V V+ +  G+GV+IR+ NG ++
Sbjct: 279 KQVWNPPPCGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVV 319


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
 Frame = +3

Query: 36   WALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETEKSVPSTHTSHAT---EWIPPP 206
            WA+W+A RN  +F+ KK   +   + A   +  Y R  +      H        +W PPP
Sbjct: 1122 WAIWFA-RNKRIFEGKKSDPRASAAKAESLLEAYHRARKPDASHIHNVKRIVQKKWEPPP 1180

Query: 207  INFAKANSDASVV-RGKGTGIGVVIRDHNGRIIRTISKLLAL 329
             NF K N DA++  R +  G+G VI+D +G+I+   +K + L
Sbjct: 1181 GNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIVAAGTKQVPL 1222


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
 Frame = +3

Query: 15   SLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEY--QRETEKSVPSTHTSHAT 188
            +L   +LW LW   RN LVF+ ++ T   V   AT+ M+ +  ++E +  V S+      
Sbjct: 1155 ALIPWILWRLW-KNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQPQVTSSTRDRCV 1213

Query: 189  EWIPPPINFAKANSDASVVRGKGT-GIGVVIRDHNGRII 302
            +W PP   + K N+D +  +  G  G+G V+R+H GR++
Sbjct: 1214 KWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLL 1252


>ref|XP_006487889.1| PREDICTED: uncharacterized protein LOC102617714 [Citrus sinensis]
          Length = 1238

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
 Frame = +3

Query: 12   VSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQRETE---KSVPSTHTSH 182
            + L   L W +WY+ +NL +F+ K+   Q   + A   M+ ++R  +   K +     + 
Sbjct: 1017 LELIVVLCWTIWYS-QNLFIFENKREDSQLSIARAEANMDSFKRIKKPFSKILEKQQRNR 1075

Query: 183  ATEWIPPPINFAKANSDASV-VRGKGTGIGVVIRDHNGRII 302
               W PPP  + K N DA+V V+ +  G+GV+IR+ NG ++
Sbjct: 1076 KQVWNPPPSGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVV 1116


>ref|XP_002525878.1| conserved hypothetical protein [Ricinus communis]
           gi|223534792|gb|EEF36482.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 543

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = +3

Query: 6   EFVSLFACLLWALWYAARNLLVFQAKKLTHQGVFSLATKTMNEYQ-RETEKSVPSTHTSH 182
           E+++LF  L W+LW A RN   F+ K++    V + A + + E Q  +T  +VP  H   
Sbjct: 357 EYINLFCMLAWSLWNA-RNRFCFEGKQICVPEVIASAQRILGENQMHQTAVAVPLPHRPL 415

Query: 183 ATEWIPPPINFAKANSDASVVRGKGTGIGV-VIRDHNGRIIRTISKLLALE 332
              W PP     K N+DA V R  G G+ V V+RD  G      +K + ++
Sbjct: 416 NENWQPPNAGRYKVNTDAGVFR-DGYGVYVFVVRDSVGNAFLAGAKRVVMQ 465


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