BLASTX nr result

ID: Rehmannia26_contig00033295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00033295
         (310 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec...    66   5e-09
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec...    65   9e-09
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec...    64   2e-08
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec...    64   2e-08
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3...    55   7e-06

>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum lycopersicum]
          Length = 671

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -2

Query: 228 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQ 136
           MDDGEGGL+FDFEGGLDTGP HPTASVPVIQ
Sbjct: 1   MDDGEGGLNFDFEGGLDTGPTHPTASVPVIQ 31


>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum tuberosum]
          Length = 677

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 228 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQ 136
           MDDGEGGL+FDFEGGLDTGP HPTASVPV+Q
Sbjct: 1   MDDGEGGLNFDFEGGLDTGPTHPTASVPVLQ 31


>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum tuberosum]
          Length = 692

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 228 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQ 136
           MD+GEGGL+FDFEGGLDTGP HPTASVPVIQ
Sbjct: 1   MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQ 31


>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
           CPSF30-like [Solanum lycopersicum]
          Length = 689

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = -2

Query: 228 MDDGEGGLSFDFEGGLDTGPIHPTASVPVIQ 136
           MD+GEGGL+FDFEGGLDTGP HPTASVPVIQ
Sbjct: 1   MDEGEGGLNFDFEGGLDTGPTHPTASVPVIQ 31


>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
           cacao]
          Length = 698

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/30 (80%), Positives = 26/30 (86%)
 Frame = -2

Query: 228 MDDGEGGLSFDFEGGLDTGPIHPTASVPVI 139
           MDD EGGLSFDFEGGLD GP  PTAS+PV+
Sbjct: 1   MDDSEGGLSFDFEGGLDAGPAAPTASMPVV 30


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