BLASTX nr result

ID: Rehmannia26_contig00032378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00032378
         (492 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004233718.1| PREDICTED: F-box protein At5g03970-like [Sol...    60   4e-07
ref|XP_006340605.1| PREDICTED: F-box protein At5g49610-like [Sol...    57   3e-06

>ref|XP_004233718.1| PREDICTED: F-box protein At5g03970-like [Solanum lycopersicum]
          Length = 485

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
 Frame = -3

Query: 490 RGMLAEIREELCYIGICNYLAWGYTIKIYTGADLAVRQQIDL-------RLEPVVTKYVK 332
           RG L +I +E+CY+   N     + I IY G D+ +++ + +       R + +     K
Sbjct: 365 RGALTQIGDEVCYVTAYNDCGSVFIIDIYGGVDMGLKRSVSVNLGSKKPRTQVLGIPNEK 424

Query: 331 GYRVLPSLRGDAVIILAGGCIYSYSLKDERVELMSGKGVEILSTTLFFPYVNSLISV 161
              VLP    D V+I     IY Y L+D++VE +   G  + +   F PY+NSL+ V
Sbjct: 425 CCEVLPCTVSDTVVIHTDTTIYFYHLRDQKVETLQSPG-RVDTDKRFLPYINSLVMV 480


>ref|XP_006340605.1| PREDICTED: F-box protein At5g49610-like [Solanum tuberosum]
          Length = 421

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
 Frame = -3

Query: 490 RGMLAEIREELCYIGICNYLAWGYTIKIYTGADLAVRQQIDLRLEPVVTK-YVKGY---- 326
           RG L +I +E+CY+   N     + I IY G D+ +++ + + L     +  V G     
Sbjct: 301 RGALTQIGDEVCYVTAYNDSGSVFVIDIYGGVDMGLKRSVSVNLGSKKPRTQVLGIPKEE 360

Query: 325 --RVLPSLRGDAVIILAGGCIYSYSLKDERVELMSGKGVEILSTTLFFPYVNSLISV 161
              VLP    D V+I     IY Y L+++++E +   G  + +   F PY+NSL++V
Sbjct: 361 CCEVLPCTDSDTVVIHTDTTIYFYHLREQKLETLQSPG-RVDTDKRFLPYINSLVTV 416


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