BLASTX nr result
ID: Rehmannia26_contig00032089
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00032089
(429 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis] 91 1e-16
ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containi... 90 3e-16
gb|ESW11366.1| hypothetical protein PHAVU_008G023900g [Phaseolus... 87 2e-15
ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
emb|CBI16904.3| unnamed protein product [Vitis vinifera] 85 9e-15
ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi... 84 1e-14
emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera] 84 1e-14
ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_003621610.1| Pentatricopeptide repeat-containing protein ... 82 6e-14
ref|XP_004491978.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
gb|EMJ18220.1| hypothetical protein PRUPE_ppa001933mg [Prunus pe... 80 3e-13
ref|XP_006482464.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
gb|EPS63127.1| hypothetical protein M569_11659 [Genlisea aurea] 79 6e-13
gb|EOY03861.1| Pentatricopeptide repeat (PPR) superfamily protei... 79 8e-13
gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sati... 79 8e-13
ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group] g... 79 8e-13
gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japo... 79 8e-13
gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat doma... 79 8e-13
gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays] 78 1e-12
>gb|EXB85809.1| hypothetical protein L484_009655 [Morus notabilis]
Length = 879
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/68 (61%), Positives = 52/68 (76%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISDE 230
+LKKEPGCSWIE++ EVH FLVGDKAHPRC EIYE L +L+GEMKW + Y ++
Sbjct: 810 KLKKEPGCSWIEVKDEVHAFLVGDKAHPRCIEIYEKLHLLVGEMKWAGYSLYAH--FDED 867
Query: 229 VIVDEQQE 206
V V+EQ+E
Sbjct: 868 VEVEEQEE 875
>ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like
[Solanum tuberosum]
Length = 894
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/76 (61%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = -3
Query: 406 LKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISDEV 227
LKKEPGCSWIE++S +HMFLVGDKAHPRC+EIYENLD LI EMK E ++S E
Sbjct: 818 LKKEPGCSWIEIKSVLHMFLVGDKAHPRCNEIYENLDTLISEMKRVSHILDNEFLLSCEA 877
Query: 226 IVDEQQE---LCAVSS 188
DE Q C VSS
Sbjct: 878 TEDEHQHPFPECRVSS 893
>gb|ESW11366.1| hypothetical protein PHAVU_008G023900g [Phaseolus vulgaris]
Length = 891
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/70 (54%), Positives = 53/70 (75%)
Frame = -3
Query: 412 CRLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISD 233
C+LKKEPGCSWIE++ EVH FLVGD+AHPR +EIYE ++L+ EMKW Y + ++ +
Sbjct: 813 CKLKKEPGCSWIEVRDEVHTFLVGDRAHPRSEEIYEQTNLLVEEMKWAGYVPYIDFLLDE 872
Query: 232 EVIVDEQQEL 203
EV E+Q++
Sbjct: 873 EV---EEQDV 879
>ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Solanum lycopersicum]
Length = 858
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = -3
Query: 406 LKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISDEV 227
LKKEPGCSWIE++S +HMFLVGDKAHPRC+EIY+NLD LI EMK EL++S E
Sbjct: 794 LKKEPGCSWIEIKSVLHMFLVGDKAHPRCNEIYDNLDALICEMKRTSQILDNELLLSCEA 853
Query: 226 IVDE 215
DE
Sbjct: 854 TEDE 857
>emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 85.1 bits (209), Expect = 9e-15
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = -3
Query: 406 LKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISDEV 227
LKKEPGCSWIE++SEVH FLVGDKAHPR EIYENLD+L EMKW + +++D+
Sbjct: 765 LKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 824
Query: 226 IVDEQQEL 203
+ Q ++
Sbjct: 825 LRSLQNQI 832
>ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -3
Query: 406 LKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKW 272
LKKEPGCSWIE++SEVH FLVGDKAHPR EIYENLD+L EMKW
Sbjct: 812 LKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKW 856
>emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 84.3 bits (207), Expect = 1e-14
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = -3
Query: 406 LKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKW 272
LKKEPGCSWIE++SEVH FLVGDKAHPR EIYENLD+L EMKW
Sbjct: 749 LKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKW 793
>ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = -3
Query: 412 CRLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISD 233
C+LKKEPGCSWIE++ EVH FLVGDKAHPR +EIYE +L+ EMKW + M+ +
Sbjct: 774 CKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDSMLDE 833
Query: 232 EV 227
EV
Sbjct: 834 EV 835
>ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 83.6 bits (205), Expect = 2e-14
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = -3
Query: 412 CRLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISD 233
C+LKKEPGCSWIE++ EVH FLVGDKAHPR +EIYE +L+ EMKW + M+ +
Sbjct: 774 CKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAGYVPDIDFMLDE 833
Query: 232 EV 227
E+
Sbjct: 834 EM 835
>ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 881
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/67 (56%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWD-YCTKYGELMISD 233
+LKKEPGCSWI+++ EVH FLVGDKAHPR +EIY+ +L+ EMKWD Y + ++ +
Sbjct: 807 KLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEIDGFLLDE 866
Query: 232 EVIVDEQ 212
E VDEQ
Sbjct: 867 E--VDEQ 871
>ref|XP_004491978.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cicer arietinum]
Length = 880
Score = 82.0 bits (201), Expect = 7e-14
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISDE 230
+LKKEPGCSWIE++ EVH FLVGDKAHPR +EIY+ +L+ EMKWD + ++ +E
Sbjct: 802 KLKKEPGCSWIEVRDEVHAFLVGDKAHPRSEEIYQLTHLLVDEMKWDGYVPDIDFLLDEE 861
Query: 229 VIVDEQ 212
VDEQ
Sbjct: 862 --VDEQ 865
>gb|EMJ18220.1| hypothetical protein PRUPE_ppa001933mg [Prunus persica]
Length = 739
Score = 80.1 bits (196), Expect = 3e-13
Identities = 32/44 (72%), Positives = 40/44 (90%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEM 278
+LKKEPGCSWIE++ E+H FLVGDKAHPRC+E+YE LD+L+ EM
Sbjct: 663 KLKKEPGCSWIEVKDELHAFLVGDKAHPRCNEVYEKLDLLVAEM 706
>ref|XP_006482464.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Citrus sinensis]
Length = 892
Score = 79.0 bits (193), Expect = 6e-13
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYC 263
+++KEPGCSWIE+ +VH FLV DK HP+C+EIYE L +LIGEMKW C
Sbjct: 815 KVRKEPGCSWIEVNDKVHTFLVRDKDHPKCEEIYEKLGLLIGEMKWRGC 863
>gb|EPS63127.1| hypothetical protein M569_11659 [Genlisea aurea]
Length = 864
Score = 79.0 bits (193), Expect = 6e-13
Identities = 33/44 (75%), Positives = 40/44 (90%)
Frame = -3
Query: 406 LKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMK 275
+KKEPGCSWIE+QSEVHMFL GD+AHP+C EIYENL +LI E++
Sbjct: 818 MKKEPGCSWIEVQSEVHMFLAGDRAHPKCREIYENLKLLIWEIR 861
>gb|EOY03861.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 860
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELMISDE 230
+LKKEPGCSWIE++ EVH FLVGDKAHPRC EIYE L +L+ EM+ Y + +
Sbjct: 786 KLKKEPGCSWIEVKDEVHAFLVGDKAHPRCKEIYEKLGILVDEMRC-YVADIDFFLEEEA 844
Query: 229 VIVDEQQEL 203
+ EQ+EL
Sbjct: 845 NQLKEQEEL 853
>gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
Length = 905
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMK 275
RLKKEPGCSWIE+QSE+H FLVGDKAHPR E+YE L+ LIGEMK
Sbjct: 828 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 872
>ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa
Japonica Group]
Length = 863
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMK 275
RLKKEPGCSWIE+QSE+H FLVGDKAHPR E+YE L+ LIGEMK
Sbjct: 786 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 830
>gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMK 275
RLKKEPGCSWIE+QSE+H FLVGDKAHPR E+YE L+ LIGEMK
Sbjct: 786 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 830
>gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
sativa Japonica Group]
Length = 391
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMK 275
RLKKEPGCSWIE+QSE+H FLVGDKAHPR E+YE L+ LIGEMK
Sbjct: 314 RLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMK 358
>gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 78.2 bits (191), Expect = 1e-12
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
Frame = -3
Query: 409 RLKKEPGCSWIELQSEVHMFLVGDKAHPRCDEIYENLDMLIGEMKWDYCTKYGELM--IS 236
RL+KEPGCSWIE+QSE+H FLVGDK HPR E+YE L+ LIGEMK L +
Sbjct: 788 RLRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEPASALFAEVE 847
Query: 235 DEVIVDEQQELCAV 194
+E EQ +L V
Sbjct: 848 EEESTSEQDDLVRV 861