BLASTX nr result
ID: Rehmannia26_contig00031500
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia26_contig00031500 (400 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006485558.1| PREDICTED: uncharacterized protein LOC102629... 60 3e-07 gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 58 1e-06 gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas... 57 2e-06 ref|XP_006478464.1| PREDICTED: TMV resistance protein N-like [Ci... 57 3e-06 ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 56 4e-06 >ref|XP_006485558.1| PREDICTED: uncharacterized protein LOC102629971 [Citrus sinensis] Length = 227 Score = 60.1 bits (144), Expect = 3e-07 Identities = 27/62 (43%), Positives = 38/62 (61%) Frame = +1 Query: 184 PSEKRGGIERTANSCQGFKNFIRGINMKNIKSDGYPFTWSNNRDGEGFVKECLDKFFASP 363 P EK G ER N F+ +R ++ ++ GYPFTWSN R G GFV+E LD+F ++ Sbjct: 22 PCEKSRGNERHPNLIHDFREALRDCDLLDVGFKGYPFTWSNGRYGPGFVEERLDRFMSNN 81 Query: 364 SW 369 +W Sbjct: 82 AW 83 >gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1715 Score = 57.8 bits (138), Expect = 1e-06 Identities = 26/66 (39%), Positives = 38/66 (57%) Frame = +1 Query: 187 SEKRGGIERTANSCQGFKNFIRGINMKNIKSDGYPFTWSNNRDGEGFVKECLDKFFASPS 366 +EK+GG R+ S Q F N I NMK++KS G P++W R E ++ CLD+ F + Sbjct: 506 NEKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQNE-TIESCLDRVFINSD 564 Query: 367 WTLNHP 384 W + P Sbjct: 565 WQASFP 570 >gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H [Medicago truncatula] Length = 1296 Score = 57.4 bits (137), Expect = 2e-06 Identities = 32/111 (28%), Positives = 51/111 (45%) Frame = +1 Query: 67 VYMSVDGGIRRDQWGYLVQASEXXXXXXXXXXXXXXXSCPSEKRGGIERTANSCQGFKNF 246 +Y S + +R + W YLV ++ PSE+RGG N F NF Sbjct: 105 IYASPNYSMRPNLWNYLVNINDTITGPWMLIGDFNETHLPSEQRGGTFHH-NRAATFSNF 163 Query: 247 IRGINMKNIKSDGYPFTWSNNRDGEGFVKECLDKFFASPSWTLNHPRATVQ 399 + N+ ++ + G FTW N +G + + LD+ A+ W L+ P A V+ Sbjct: 164 MNNCNLLDLTTTGGRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVE 214 >ref|XP_006478464.1| PREDICTED: TMV resistance protein N-like [Citrus sinensis] Length = 1442 Score = 57.0 bits (136), Expect = 3e-06 Identities = 23/61 (37%), Positives = 40/61 (65%) Frame = +1 Query: 187 SEKRGGIERTANSCQGFKNFIRGINMKNIKSDGYPFTWSNNRDGEGFVKECLDKFFASPS 366 +EK GG++R+ ++ F+ +R ++ ++ S GYPFTWSN + G ++E LD+FF + Sbjct: 1250 NEKIGGLDRSVDAVGEFREAVRDCSLIDLGSRGYPFTWSNRQFGPKLIEEKLDRFFCNQE 1309 Query: 367 W 369 W Sbjct: 1310 W 1310 >ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis] Length = 2303 Score = 56.2 bits (134), Expect = 4e-06 Identities = 24/63 (38%), Positives = 38/63 (60%) Frame = +1 Query: 190 EKRGGIERTANSCQGFKNFIRGINMKNIKSDGYPFTWSNNRDGEGFVKECLDKFFASPSW 369 EK GG E+ + F+ ++ N+ ++ G+PFTWSN R G+ F++E LD+F S W Sbjct: 108 EKSGGNEKNIDMVVQFREAVQACNLVDVGYRGHPFTWSNRRYGQHFIEERLDRFLCSNDW 167 Query: 370 TLN 378 + N Sbjct: 168 SEN 170