BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030898
         (867 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containi...   374   e-101
gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily p...   373   e-101
ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Popu...   366   7e-99
ref|XP_002532904.1| pentatricopeptide repeat-containing protein,...   365   9e-99
gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]     363   3e-98
ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containi...   360   4e-97
ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containi...   357   2e-96
ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citr...   355   1e-95
gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus pe...   354   3e-95
ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containi...   353   6e-95
ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containi...   349   7e-94
ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containi...   341   2e-91
ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containi...   340   3e-91
gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus...   337   3e-90
ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containi...   333   5e-89
ref|XP_003621319.1| Pentatricopeptide repeat-containing protein ...   329   7e-88
ref|XP_002875497.1| pentatricopeptide repeat-containing protein ...   325   2e-86
ref|XP_004491871.1| PREDICTED: pentatricopeptide repeat-containi...   323   5e-86
ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Caps...   323   5e-86
ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutr...   322   1e-85

>ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
           [Vitis vinifera]
          Length = 594

 Score =  374 bits (960), Expect = e-101
 Identities = 184/291 (63%), Positives = 225/291 (77%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           EM+ SG+  DN+TY FLLKACSG   ++ V+MIHA +EK     D+FVPNSLID+Y KCG
Sbjct: 105 EMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCLDIFVPNSLIDSYFKCG 164

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L GV  A+  F+VM ERD V++NSMI GLVK GEL EA++LFDEMP+RD VSWNTILDGY
Sbjct: 165 LDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDEMPERDTVSWNTILDGY 224

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
           VK+G+M +AFELFEKMP+R+VVSWST++ GY+K GD++MA++LFD MPVKNLV WTIMIS
Sbjct: 225 VKAGEMNAAFELFEKMPARNVVSWSTMVLGYSKAGDMDMARILFDKMPVKNLVPWTIMIS 284

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKGLA++AI LY QME+  L+ DDGT +               K+VH SI ++R KC
Sbjct: 285 GYAEKGLAKDAINLYNQMEEAGLKFDDGTVISILSACAVSGLLGLGKRVHASIERTRFKC 344

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T VSNALIDMY KCGSL  A S+F+GM  KD VSWN++I GLAMHGH +K
Sbjct: 345 STPVSNALIDMYAKCGSLENALSIFHGMVRKDVVSWNAIIQGLAMHGHGEK 395


>gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
            [Theobroma cacao]
          Length = 672

 Score =  373 bits (957), Expect = e-101
 Identities = 176/288 (61%), Positives = 223/288 (77%)
 Frame = +1

Query: 4    EMRWSGILPDNYTYLFLLKACSGLKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMG 183
            +M+W+GIL DN+TY FLLKAC+ LK V+MIH  +EK    SD+FVPN+LID+YSK G +G
Sbjct: 173  DMQWNGILADNFTYTFLLKACTDLKMVEMIHTQIEKNGFLSDIFVPNALIDSYSKFGELG 232

Query: 184  VREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGYVKS 363
            ++ A   F VME+RD+V++NSMI GL+K GEL+EA+KLFDEMPQRD VSWNTILDGYVK+
Sbjct: 233  IKAALKLFMVMEDRDVVSWNSMIGGLLKVGELREARKLFDEMPQRDMVSWNTILDGYVKA 292

Query: 364  GDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYA 543
            G+M  AFELF+K+P R+VVSWST++ GY+K GD++MA+VLFD MPVK LV WTI+ISGYA
Sbjct: 293  GEMEKAFELFQKIPQRNVVSWSTMVSGYSKAGDMDMARVLFDRMPVKTLVPWTIIISGYA 352

Query: 544  EKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKCCTV 723
            EKGLA+EAI LY +ME+  L+ DDGT +                KVH SI + R +C   
Sbjct: 353  EKGLAKEAIELYDRMEQDGLELDDGTVIGILAACAESGLLAVGVKVHNSIERLRFRCSIA 412

Query: 724  VSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            V NAL+DMY KCGSL++AWSVFNGM  +D VSWN+M+ G AMHGH ++
Sbjct: 413  VCNALVDMYAKCGSLDKAWSVFNGMPKRDVVSWNAMLQGFAMHGHGKE 460



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 38/309 (12%)
 Frame = +1

Query: 55  LKACSGLKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMGVREAKMAFDVMEERDLV 234
           L  C+ L  +K + A + + NL+ DL++   LI A+S C    +  A   F+ +++ ++ 
Sbjct: 92  LHKCTNLSHIKQLQAQIIRQNLHQDLYIAPKLISAFSLC--RQITLALTVFNQIQDPNVH 149

Query: 235 TYNSMISGLVKAGELKEAKKLFDEMPQR----DRVSW----------------------- 333
            YN++I   V+  +  +A   F +M       D  ++                       
Sbjct: 150 LYNNLIRAYVQNSQPSQAFSFFFDMQWNGILADNFTYTFLLKACTDLKMVEMIHTQIEKN 209

Query: 334 ---------NTILDGYVKSGDM--ISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKV 480
                    N ++D Y K G++   +A +LF  M  RDVVSW+++I G  K G++  A+ 
Sbjct: 210 GFLSDIFVPNALIDSYSKFGELGIKAALKLFMVMEDRDVVSWNSMIGGLLKVGELREARK 269

Query: 481 LFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXX 660
           LFD MP +++V+W  ++ GY + G   +A  L+ ++ +  +                   
Sbjct: 270 LFDEMPQRDMVSWNTILDGYVKAGEMEKAFELFQKIPQRNV------------------- 310

Query: 661 XXXXKKVHRSITKSRTKCCTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHG 840
                               V  + ++  Y K G ++ A  +F+ M  K  V W  +I G
Sbjct: 311 --------------------VSWSTMVSGYSKAGDMDMARVLFDRMPVKTLVPWTIIISG 350

Query: 841 LAMHGHAQK 867
            A  G A++
Sbjct: 351 YAEKGLAKE 359


>ref|XP_002305377.2| hypothetical protein POPTR_0004s12430g [Populus trichocarpa]
           gi|550340897|gb|EEE85888.2| hypothetical protein
           POPTR_0004s12430g [Populus trichocarpa]
          Length = 604

 Score =  366 bits (939), Expect = 7e-99
 Identities = 179/291 (61%), Positives = 217/291 (74%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           EM+ +G+  DN+TY FLLKAC G   L  VKMIH HLEKY  + DLFVPNSLID+Y KCG
Sbjct: 111 EMQRNGLFADNFTYPFLLKACDGQSWLPLVKMIHNHLEKYGFFQDLFVPNSLIDSYCKCG 170

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L+GV+ A   F VM+ERD+V++NSMI GL+K GEL EA KLFDEMP +D VSWNTILDGY
Sbjct: 171 LLGVKSAMRLFKVMDERDVVSWNSMIRGLLKVGELSEACKLFDEMPMKDAVSWNTILDGY 230

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
           VK+G+M  AF LFE MP R+VVSWST++ GY K GD+EMA++LFD MPVKNLV+WTI++S
Sbjct: 231 VKAGEMNKAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKNLVSWTIIVS 290

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYA KGLA++AI  + QME+  L+ DDGT +               K+VH SI + R KC
Sbjct: 291 GYAVKGLAKDAIRSFEQMEEAGLKPDDGTIISILASCAESGLLGLGKRVHTSIERIRYKC 350

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
              VSNAL+DMY KCG ++RA SVFNGM  KD VSWN M+ GLAMHGH +K
Sbjct: 351 SVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEK 401



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 39/201 (19%)
 Frame = +1

Query: 142 NSLIDAYSKCGLMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRD 321
           N+++D Y K G M   +A   F+ M ER++V++++M+SG  KAG+++ A+ LFD MP ++
Sbjct: 224 NTILDGYVKAGEMN--KAFGLFESMPERNVVSWSTMVSGYCKAGDMEMARMLFDRMPVKN 281

Query: 322 RVSWNTILDGYVKSG---DMISAFELFE----KMPSRDVVSW------------------ 426
            VSW  I+ GY   G   D I +FE  E    K     ++S                   
Sbjct: 282 LVSWTIIVSGYAVKGLAKDAIRSFEQMEEAGLKPDDGTIISILASCAESGLLGLGKRVHT 341

Query: 427 --------------STVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLARE 564
                         + ++  YAK G V+ A  +F+ M  K+LV+W  M+ G A  G   +
Sbjct: 342 SIERIRYKCSVNVSNALVDMYAKCGQVDRALSVFNGMSKKDLVSWNCMLQGLAMHGHGEK 401

Query: 565 AIGLYGQMEKTKLQADDGTFV 627
           A+ L+  M +   + D  T V
Sbjct: 402 ALQLFSIMRQEGFRPDKVTLV 422


>ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527338|gb|EEF29484.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 604

 Score =  365 bits (938), Expect = 9e-99
 Identities = 179/291 (61%), Positives = 218/291 (74%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ +G+  DN+TY FLLKAC+G   L +V+MIH H+EKY  + DLFVPNSLID+YSKCG
Sbjct: 111 DMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGDLFVPNSLIDSYSKCG 170

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L+GV  A   F  M E+DLV++NSMI GLVKAG+L  A+KLFDEM +RD VSWNTILDGY
Sbjct: 171 LLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEMAERDAVSWNTILDGY 230

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
           VK+G+M  AF LFEKMP R+VVSWST++ GY KTGD+EMA++LFD MP KNLVTWTI+IS
Sbjct: 231 VKAGEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGDMEMARMLFDKMPFKNLVTWTIIIS 290

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           G+AEKGLA+EA  LY QME   L+ DDGT +               KKVH SI K R KC
Sbjct: 291 GFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAACAESGLLVLGKKVHASIKKIRIKC 350

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
              VSNAL+DMY KCG +++A S+FN M  +D VSWN M+ GLAMHGH +K
Sbjct: 351 SVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSWNCMLQGLAMHGHGEK 401


>gb|EXB38041.1| hypothetical protein L484_020960 [Morus notabilis]
          Length = 599

 Score =  363 bits (933), Expect = 3e-98
 Identities = 172/290 (59%), Positives = 221/290 (76%), Gaps = 3/290 (1%)
 Frame = +1

Query: 7   MRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGL 177
           M+ +G+ PDNYTY FLLKACSG   L  V+M+H H+EK    SD+FVPN+LID+YSKCG 
Sbjct: 108 MQSNGVSPDNYTYSFLLKACSGKAWLSVVQMVHTHIEKCGFCSDIFVPNALIDSYSKCGP 167

Query: 178 MGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGYV 357
           +GV  AK  F  M  RD+V++NSM+ GLVK GEL EA++LFDEMP+RD V+WNT+LDGYV
Sbjct: 168 VGVFAAKKLFLAMGVRDVVSWNSMVGGLVKVGELGEARQLFDEMPERDLVTWNTMLDGYV 227

Query: 358 KSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMISG 537
           K+G M  AFE F++MP R+VVSWST++ GY++ GD++MA++LFD MPVKNLVTWTI++SG
Sbjct: 228 KAGQMSEAFEFFQRMPERNVVSWSTIVSGYSRAGDMDMARILFDKMPVKNLVTWTIIVSG 287

Query: 538 YAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKCC 717
           YA KG+A EA  LY QME   L+ DDGT +               +KVH S+ + R +CC
Sbjct: 288 YAAKGIANEANSLYDQMEDAGLKFDDGTIISVLAACAESGLLGLGEKVHASMDRIRYRCC 347

Query: 718 TVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
           T VSNAL+DMY KCGSL++A+ VFNG+ +KD VSWN+MIHGLA+HGH +K
Sbjct: 348 TPVSNALVDMYAKCGSLDKAYKVFNGIGNKDLVSWNAMIHGLAIHGHGEK 397


>ref|XP_006338411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum tuberosum]
          Length = 602

 Score =  360 bits (924), Expect = 4e-97
 Identities = 179/291 (61%), Positives = 217/291 (74%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ SGI PDN+T+ FLLK CSG   L  V MIH H+ K+    D++VPNSLIDAYSKCG
Sbjct: 107 DMQSSGIFPDNFTFSFLLKGCSGKCWLSVVSMIHTHVVKWGFEDDIYVPNSLIDAYSKCG 166

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L+GVR A   F  M+ERD+V++NSMIS L+K G+L EA+KLFDEMPQRDRVSWNT+LDGY
Sbjct: 167 LVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQRDRVSWNTMLDGY 226

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+  M  AFELF+ MP RDVVSWST++ GY K GD+EMA++LFD MP KNLV+WTIMIS
Sbjct: 227 TKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDKMPSKNLVSWTIMIS 286

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKGL  EAI L+ QME+T L+ D   FV               KKVH S+ +S  KC
Sbjct: 287 GYAEKGLVNEAIQLFMQMEETGLRLDVAAFVSILAACAESGMLSLGKKVHDSVERSTYKC 346

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T+V NALIDMY KCG L++A+ VFNG+E +D VSWN+MIHGLAMHG  +K
Sbjct: 347 NTLVCNALIDMYAKCGCLHKAYKVFNGLEKRDLVSWNAMIHGLAMHGRGKK 397



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 71/278 (25%), Positives = 123/278 (44%), Gaps = 41/278 (14%)
 Frame = +1

Query: 142  NSLIDAYSKCGLMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRD 321
            N+++D Y+K   M V  A   F  M +RD+V++++M+SG  KAG+L+ A+ LFD+MP ++
Sbjct: 220  NTMLDGYTKAEQMSV--AFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDKMPSKN 277

Query: 322  RVSWNTILDGYVKSGDMISAFELFEKMPSR----DVVSWSTVIFG--------------- 444
             VSW  ++ GY + G +  A +LF +M       DV ++ +++                 
Sbjct: 278  LVSWTIMISGYAEKGLVNEAIQLFMQMEETGLRLDVAAFVSILAACAESGMLSLGKKVHD 337

Query: 445  --------------------YAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLARE 564
                                YAK G +  A  +F+ +  ++LV+W  MI G A  G  ++
Sbjct: 338  SVERSTYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLEKRDLVSWNAMIHGLAMHGRGKK 397

Query: 565  AIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKS-RTKCCTVVSNALI 741
            A+ L+ +M++     D  T V                    S+ K    K        LI
Sbjct: 398  ALELFFRMKQEGFVPDKVTLVGILCACNHTGLVDEGILFFYSMEKDYGVKPEVEHYGCLI 457

Query: 742  DMYCKCGSLNRAWSVFNGMESKDSVS-WNSMIHGLAMH 852
            D+  + G +  A+ +   M  + +V  W S++    MH
Sbjct: 458  DLLGRGGYVREAFELARKMPLEPNVKIWGSLLGACRMH 495



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
 Frame = +1

Query: 73  LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMGVREAKMAFDVMEER----DLVTY 240
           L+  +M+   +   NL S       +I  Y++ GL  V EA   F  MEE     D+  +
Sbjct: 263 LEMARMLFDKMPSKNLVSWTI----MISGYAEKGL--VNEAIQLFMQMEETGLRLDVAAF 316

Query: 241 NSMISGLVKAGELKEAKKLFDEMPQR----DRVSWNTILDGYVKSGDMISAFELFEKMPS 408
            S+++   ++G L   KK+ D + +     + +  N ++D Y K G +  A+++F  +  
Sbjct: 317 VSILAACAESGMLSLGKKVHDSVERSTYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLEK 376

Query: 409 RDVVSWSTVIFGYAKTGDVEMAKVLFDNMP----VKNLVTWTIMISGYAEKGLAREAIGL 576
           RD+VSW+ +I G A  G  + A  LF  M     V + VT   ++      GL  E I  
Sbjct: 377 RDLVSWNAMIHGLAMHGRGKKALELFFRMKQEGFVPDKVTLVGILCACNHTGLVDEGILF 436

Query: 577 YGQMEK 594
           +  MEK
Sbjct: 437 FYSMEK 442


>ref|XP_004232191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Solanum lycopersicum]
          Length = 602

 Score =  357 bits (917), Expect = 2e-96
 Identities = 178/291 (61%), Positives = 217/291 (74%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ SGI PDN+T+ FLLK CSG   L  V MIH H+ K+    D++VPNSLIDAYSKCG
Sbjct: 107 DMQSSGIFPDNFTFSFLLKGCSGKCWLSVVSMIHTHVVKWGFEDDIYVPNSLIDAYSKCG 166

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L+GVR A   F  M+ERD+V++NSMIS L+K G+L EA+KLFDEMPQRDRVSWNT+LDGY
Sbjct: 167 LVGVRIAGQLFWGMKERDVVSWNSMISALLKVGDLSEARKLFDEMPQRDRVSWNTMLDGY 226

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+  M  AFELF+ MP RDVVSWST++ GY K GD+EMA++LFD MP KNLV+WTIMIS
Sbjct: 227 TKAEQMSVAFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDKMPSKNLVSWTIMIS 286

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKGL  EAI L+ QME+T L+ D   FV               KKVH S+ +S  KC
Sbjct: 287 GYAEKGLINEAILLFMQMEETGLRLDVAAFVSILAACAESGMLSLGKKVHDSVERSMYKC 346

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T+V NALIDMY KCG L++A+ VFNG++ +D VSWN+MIHGLAMHG  +K
Sbjct: 347 NTLVCNALIDMYAKCGCLHKAYKVFNGLKKRDLVSWNAMIHGLAMHGRGKK 397



 Score = 87.0 bits (214), Expect = 8e-15
 Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 41/278 (14%)
 Frame = +1

Query: 142  NSLIDAYSKCGLMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRD 321
            N+++D Y+K   M V  A   F  M +RD+V++++M+SG  KAG+L+ A+ LFD+MP ++
Sbjct: 220  NTMLDGYTKAEQMSV--AFELFKTMPQRDVVSWSTMVSGYCKAGDLEMARMLFDKMPSKN 277

Query: 322  RVSWNTILDGYVKSGDMISAFELFEKMPSR----DVVSWSTVIFG--------------- 444
             VSW  ++ GY + G +  A  LF +M       DV ++ +++                 
Sbjct: 278  LVSWTIMISGYAEKGLINEAILLFMQMEETGLRLDVAAFVSILAACAESGMLSLGKKVHD 337

Query: 445  --------------------YAKTGDVEMAKVLFDNMPVKNLVTWTIMISGYAEKGLARE 564
                                YAK G +  A  +F+ +  ++LV+W  MI G A  G  ++
Sbjct: 338  SVERSMYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLKKRDLVSWNAMIHGLAMHGRGKK 397

Query: 565  AIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKS-RTKCCTVVSNALI 741
            A+ L+ +M++     D  T V                    S+ K    K        LI
Sbjct: 398  ALELFIRMKQEGFVPDKVTLVGILCACNHTGLVDEGILFFYSMEKDYGVKPEVEHYGCLI 457

Query: 742  DMYCKCGSLNRAWSVFNGMESKDSVS-WNSMIHGLAMH 852
            D+  + G +  A+ +   M  + ++  W S++    MH
Sbjct: 458  DLLGRGGYVREAFELARKMPLEPNIKIWGSLLGACRMH 495



 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
 Frame = +1

Query: 73  LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMGVREAKMAFDVMEER----DLVTY 240
           L+  +M+   +   NL S       +I  Y++ GL  + EA + F  MEE     D+  +
Sbjct: 263 LEMARMLFDKMPSKNLVSWTI----MISGYAEKGL--INEAILLFMQMEETGLRLDVAAF 316

Query: 241 NSMISGLVKAGELKEAKKLFDEMPQR----DRVSWNTILDGYVKSGDMISAFELFEKMPS 408
            S+++   ++G L   KK+ D + +     + +  N ++D Y K G +  A+++F  +  
Sbjct: 317 VSILAACAESGMLSLGKKVHDSVERSMYKCNTLVCNALIDMYAKCGCLHKAYKVFNGLKK 376

Query: 409 RDVVSWSTVIFGYAKTGDVEMAKVLFDNMP----VKNLVTWTIMISGYAEKGLAREAIGL 576
           RD+VSW+ +I G A  G  + A  LF  M     V + VT   ++      GL  E I  
Sbjct: 377 RDLVSWNAMIHGLAMHGRGKKALELFIRMKQEGFVPDKVTLVGILCACNHTGLVDEGILF 436

Query: 577 YGQMEK 594
           +  MEK
Sbjct: 437 FYSMEK 442


>ref|XP_006431260.1| hypothetical protein CICLE_v10011308mg [Citrus clementina]
           gi|557533317|gb|ESR44500.1| hypothetical protein
           CICLE_v10011308mg [Citrus clementina]
          Length = 614

 Score =  355 bits (911), Expect = 1e-95
 Identities = 175/291 (60%), Positives = 217/291 (74%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+  G+  DN+TY FLLKAC+G      V+MIHA + K   + D+FVPNSLID+YSKCG
Sbjct: 114 DMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCG 173

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           ++GV  AK  F  M ERD+V++NSMI+GLVK GEL EA++LFDEMP+RD VSWNTILDGY
Sbjct: 174 VVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGGELSEARRLFDEMPERDAVSWNTILDGY 233

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G+M  AFELFEK+P R++VSWST+++GY+K GD+EMAK+LFD MP K LV WTI+IS
Sbjct: 234 AKAGEMNLAFELFEKIPHRNIVSWSTMVWGYSKDGDMEMAKLLFDRMPAKTLVPWTIIIS 293

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKG+A+EA  LY QME+  L+ DDGT +                KVH SI K R KC
Sbjct: 294 GYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACTESGLLGLGMKVHASINKYRFKC 353

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T V NAL+DMY KCGSL+ A SVFNGM  KD VSWN+M++GLAMHG  +K
Sbjct: 354 NTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEK 404


>gb|EMJ18478.1| hypothetical protein PRUPE_ppa017633mg [Prunus persica]
          Length = 603

 Score =  354 bits (908), Expect = 3e-95
 Identities = 172/291 (59%), Positives = 215/291 (73%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ +G+ PDN+TY FLLKACSG      V+MIH  +EK+    D+FVPNSLID YSKCG
Sbjct: 105 DMQLNGVYPDNFTYPFLLKACSGRPWFPVVQMIHTSIEKFGFCLDIFVPNSLIDTYSKCG 164

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L+GV EAK  F +M ERD+V++NSMI GL K GEL EA++LFDEMP +D VSWNTILDGY
Sbjct: 165 LLGVSEAKKMFMLMGERDIVSWNSMIGGLAKTGELGEARRLFDEMPDKDAVSWNTILDGY 224

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G M  AFELFE+MP R+VVSWST++ GY+K GD+ MA+++FD MP +NLV WTI+IS
Sbjct: 225 AKAGQMNEAFELFERMPQRNVVSWSTLVSGYSKAGDMGMARMMFDKMPFRNLVPWTIIIS 284

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKGLA+EAI LY QME+  L+ D+G  +               +KVH SI ++R KC
Sbjct: 285 GYAEKGLAKEAIMLYDQMEEAGLKPDNGAIISILAACAESGLIGLGRKVHASIERTRFKC 344

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T VSNAL+DMY KCG L+ A  VF+G+  KD VSWN+M+ GLAMHGH  K
Sbjct: 345 STPVSNALLDMYAKCGMLDEASRVFHGIAKKDLVSWNAMLQGLAMHGHGDK 395



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 77/312 (24%), Positives = 131/312 (41%), Gaps = 41/312 (13%)
 Frame = +1

Query: 55  LKACSGLKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMGVREAKMAFDVMEERDLV 234
           L  C+ L  +K +HA + K NL+ DL     LI A+S C  M +  A   F+ +++ ++ 
Sbjct: 24  LHRCTNLSHIKQVHAQILKANLHQDLHTAPKLIAAFSLCRQMAL--AVNVFNQVQDPNVH 81

Query: 235 TYNSMISGLVKAGELKEAKKLFDEMPQR----DRVSW----------------------- 333
            YN++I   ++  +  +A   F +M       D  ++                       
Sbjct: 82  LYNTLIRAHIQNSQTTQAFATFFDMQLNGVYPDNFTYPFLLKACSGRPWFPVVQMIHTSI 141

Query: 334 ------------NTILDGYVKSG--DMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEM 471
                       N+++D Y K G   +  A ++F  M  RD+VSW+++I G AKTG++  
Sbjct: 142 EKFGFCLDIFVPNSLIDTYSKCGLLGVSEAKKMFMLMGERDIVSWNSMIGGLAKTGELGE 201

Query: 472 AKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXX 651
           A+ LFD MP K+ V+W  ++ GYA+ G   EA  L+ +M +  +                
Sbjct: 202 ARRLFDEMPDKDAVSWNTILDGYAKAGQMNEAFELFERMPQRNV---------------- 245

Query: 652 XXXXXXXKKVHRSITKSRTKCCTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSM 831
                                  V  + L+  Y K G +  A  +F+ M  ++ V W  +
Sbjct: 246 -----------------------VSWSTLVSGYSKAGDMGMARMMFDKMPFRNLVPWTII 282

Query: 832 IHGLAMHGHAQK 867
           I G A  G A++
Sbjct: 283 ISGYAEKGLAKE 294


>ref|XP_004306116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Fragaria vesca subsp. vesca]
          Length = 605

 Score =  353 bits (905), Expect = 6e-95
 Identities = 172/291 (59%), Positives = 215/291 (73%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+  G+ PDN+T+ FLLKACSG   L  V MIHA +EK+    D+FVPNSLID YSKCG
Sbjct: 107 DMQAHGVYPDNFTFPFLLKACSGKGYLHVVLMIHAQIEKFGFCGDIFVPNSLIDTYSKCG 166

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
           L GV  A+  F VMEE+D+V++NSMI GL +AGEL +A++LFDEMP+RD VSWN+ILDGY
Sbjct: 167 LEGVGAARKLFRVMEEKDIVSWNSMIGGLARAGELSDARQLFDEMPERDAVSWNSILDGY 226

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G M  AFELFE+MP R+VVSWST++ GY+K GD+ MA+++FD MP KNLV WTI+IS
Sbjct: 227 AKAGKMDEAFELFERMPQRNVVSWSTLVSGYSKVGDMGMARMMFDRMPFKNLVPWTIIIS 286

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYA+KGLA+EAI LY QME   L+ D+G  +               KKVH SI ++R KC
Sbjct: 287 GYAQKGLAKEAIMLYDQMEGDGLKLDNGAIISILAACAESGLIALGKKVHESIERNRFKC 346

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T V NAL+DMY KCG L  A+ VF+G+  KD VSWNSM+ GLAMHGH +K
Sbjct: 347 STPVLNALLDMYAKCGGLEEAYRVFDGIARKDLVSWNSMLQGLAMHGHGEK 397


>ref|XP_006482717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Citrus sinensis]
          Length = 614

 Score =  349 bits (896), Expect = 7e-94
 Identities = 174/291 (59%), Positives = 214/291 (73%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+  G+  DN+TY FLLKAC+G      V+MIHA + K   + D+FVPNSLID+YSKCG
Sbjct: 114 DMQEKGVFTDNFTYPFLLKACNGKNWFHLVQMIHALIYKCGYFGDIFVPNSLIDSYSKCG 173

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
            +GV  AK  F  M ERD+V++NSMI+GLVK  EL EA++LFDEMP+RD VSWNTILDGY
Sbjct: 174 AVGVSLAKKLFMSMGERDIVSWNSMIAGLVKGEELSEARRLFDEMPERDAVSWNTILDGY 233

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G+M  AFELFEK+P R++VSWST+I+GY+K  D+EMAK+LFD MP K LV WTI+IS
Sbjct: 234 AKAGEMNLAFELFEKIPHRNIVSWSTMIWGYSKDADMEMAKLLFDRMPAKTLVPWTIIIS 293

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKG+A+EA  LY QME+  L+ DDGT +                KVH SI K R KC
Sbjct: 294 GYAEKGMAKEAARLYDQMEEAGLKPDDGTLISILAACAESGLLGLGMKVHASINKYRFKC 353

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T V NAL+DMY KCGSL+ A SVFNGM  KD VSWN+M++GLAMHG  +K
Sbjct: 354 NTNVCNALVDMYAKCGSLDNAMSVFNGMTKKDLVSWNAMLYGLAMHGQGEK 404


>ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  341 bits (874), Expect = 2e-91
 Identities = 166/292 (56%), Positives = 213/292 (72%), Gaps = 4/292 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSGLKS---VKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ +G+ PDN+TY FLLKAC+G  S   V+MIHAH+EK+  Y D+FVPNSLID+YS+CG
Sbjct: 110 QMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFGFYGDIFVPNSLIDSYSRCG 169

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
             G+  A   F  M+ERD+VT+NSMI GLV+ GEL+ A KLFDEMP+RD VSWNT+LDGY
Sbjct: 170 SAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKLFDEMPERDMVSWNTMLDGY 229

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G+M  AFELFE+MP R++VSWST++ GY+K GD++MA+VLFD  P KN+V WT +I+
Sbjct: 230 AKAGEMDRAFELFERMPQRNIVSWSTMVCGYSKGGDMDMARVLFDRCPAKNVVLWTTIIA 289

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKG  REA  LYG+ME+  L+ DDG  +               K++H S+ + R +C
Sbjct: 290 GYAEKGFVREATELYGKMEEAGLRPDDGFLISILAACAESGMLGLGKRIHASMRRWRFRC 349

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNG-MESKDSVSWNSMIHGLAMHGHAQK 867
            T V NA IDMY KCG L+ A+ VF+G M  KD VSWNSMI G AMHGH +K
Sbjct: 350 GTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEK 401


>ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 604

 Score =  340 bits (873), Expect = 3e-91
 Identities = 168/292 (57%), Positives = 214/292 (73%), Gaps = 4/292 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSGLKS---VKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ +G+ PDN+TY FLLKACSG  S   V+MIHAH+EK   Y D+FVPNSLID+YS+CG
Sbjct: 110 QMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGFYGDIFVPNSLIDSYSRCG 169

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
             G+  A   F  MEERD+VT+NSMI GLV+ GEL+ A KLFDEMP RD VSWNT+LDGY
Sbjct: 170 NAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLFDEMPDRDMVSWNTMLDGY 229

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G+M +AFELFE+MP R++VSWST++ GY+K GD++MA++LFD  PVKN+V WT +I+
Sbjct: 230 AKAGEMDTAFELFERMPWRNIVSWSTMVCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIA 289

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKGLAREA  LYG+ME+  ++ DDG  +               K++H S+ + R +C
Sbjct: 290 GYAEKGLAREATELYGKMEEAGMRPDDGFLLSILAACAESGMLGLGKRIHASMRRWRFRC 349

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNG-MESKDSVSWNSMIHGLAMHGHAQK 867
              V NA IDMY KCG L+ A+ VF+G M  KD VSWNSMI G AMHGH +K
Sbjct: 350 GAKVLNAFIDMYAKCGCLDAAFDVFSGMMAKKDVVSWNSMIQGFAMHGHGEK 401


>gb|ESW11550.1| hypothetical protein PHAVU_008G039700g [Phaseolus vulgaris]
          Length = 604

 Score =  337 bits (864), Expect = 3e-90
 Identities = 167/292 (57%), Positives = 211/292 (72%), Gaps = 4/292 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKAC---SGLKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M  SG+ PDN+TY  LLKAC   S L  V+MIHAH+EK+ LY+D+FVPNSLID+YS+CG
Sbjct: 110 QMLKSGLFPDNFTYPSLLKACTDSSSLPLVRMIHAHVEKFGLYADIFVPNSLIDSYSRCG 169

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
             G+  A   F  MEERD+VT+NSMI GLV+ GEL+ A+KLFDEMP+RD VSWNT+LDGY
Sbjct: 170 SSGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELERARKLFDEMPERDMVSWNTMLDGY 229

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+G+M  AF+LFEK+P R++VSWST++ GY+K GD++MA++LFD  P KN+V WT +I+
Sbjct: 230 TKAGEMDKAFDLFEKIPERNIVSWSTMVCGYSKAGDIDMARMLFDKCPGKNVVLWTTIIA 289

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKG AREA  LYG+ME+  L+ DDG                  ++VH S+ K R +C
Sbjct: 290 GYAEKGNAREATELYGKMEEAGLRPDDGFLFSILAACAKSGMLELGRRVHASVKKLRFRC 349

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNG-MESKDSVSWNSMIHGLAMHGHAQK 867
            T V NA IDMY KCG L+ A  VF+G M  KD VSWNSMI   AMHGH +K
Sbjct: 350 GTKVLNAFIDMYAKCGCLDAASDVFSGMMAKKDVVSWNSMIQAFAMHGHGKK 401


>ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 601

 Score =  333 bits (854), Expect = 5e-89
 Identities = 162/291 (55%), Positives = 212/291 (72%), Gaps = 4/291 (1%)
 Frame = +1

Query: 7   MRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGL 177
           M+  G   DN+T+ FLLK C+G   L  ++ +HA +EK+   SD+FVPNSLID+YSKCG 
Sbjct: 109 MQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGS 168

Query: 178 MGVREAKMAFDVM-EERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
            G+  AK  F  M   RD+V++NSMISGL K G  +EA+K+FDEMP++D +SWNT+LDGY
Sbjct: 169 CGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYEEARKVFDEMPEKDGISWNTMLDGY 228

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
           VK G M  AF+LF++MP R+VVSWST++ GY K GD+EMA++LFD MPVKNLV+WTI++S
Sbjct: 229 VKVGKMDDAFKLFDEMPERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVS 288

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           G+AEKGLAREAI L+ QMEK  L+ D+GT +               +K+H SI  +  KC
Sbjct: 289 GFAEKGLAREAISLFDQMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKC 348

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
            T +SNAL+DMY KCG LN A+ VFN +++KD VSWN+M+ GLAMHGH  K
Sbjct: 349 TTEISNALVDMYAKCGRLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVK 399



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 82/313 (26%), Positives = 131/313 (41%), Gaps = 42/313 (13%)
 Frame = +1

Query: 55  LKACSGLKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMGVREAKMAFDVMEERDLV 234
           L  C+ L  VK +HA + K NL+ DLFV   LI A+S C  M +  A  AF+ ++  ++ 
Sbjct: 27  LHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLL--ATNAFNQVQYPNVH 84

Query: 235 TYNSMISGLVKAGELKEAKKLFDEMPQRDRVS----------------W----------- 333
            YN+MI       +  +A   F  M +    +                W           
Sbjct: 85  LYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVWLPVIESVHAQI 144

Query: 334 ------------NTILDGYVKSGD--MISAFELFEKMPS-RDVVSWSTVIFGYAKTGDVE 468
                       N+++D Y K G   + +A +LF  M + RDVVSW+++I G AK G  E
Sbjct: 145 EKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSMISGLAKGGLYE 204

Query: 469 MAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXX 648
            A+ +FD MP K+ ++W  M+ GY + G   +A  L+ +M +  +               
Sbjct: 205 EARKVFDEMPEKDGISWNTMLDGYVKVGKMDDAFKLFDEMPERNV--------------- 249

Query: 649 XXXXXXXXKKVHRSITKSRTKCCTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNS 828
                                   V  + ++  YCK G +  A  +F+ M  K+ VSW  
Sbjct: 250 ------------------------VSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTI 285

Query: 829 MIHGLAMHGHAQK 867
           ++ G A  G A++
Sbjct: 286 IVSGFAEKGLARE 298


>ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496334|gb|AES77537.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 605

 Score =  329 bits (844), Expect = 7e-88
 Identities = 162/293 (55%), Positives = 209/293 (71%), Gaps = 5/293 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSGLKS----VKMIHAHLEKYNLYSDLFVPNSLIDAYSKC 171
           +M   G+L DN+TY FLLK C+G  S    VKM+HAH+EK   Y D+FVPNSLID Y +C
Sbjct: 113 KMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRC 172

Query: 172 GLMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDG 351
           G   V  A   F  MEERD+V++NSM+ GLVK G+L  A K+FDEMP+RDRVSWNT+LDG
Sbjct: 173 G--DVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDG 230

Query: 352 YVKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMI 531
           + K+G+M  AF+LFE+M  RD+VSWST++ GY+K GD++MA++LFD  PVKNLV WT +I
Sbjct: 231 FTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTII 290

Query: 532 SGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTK 711
           SGYAEKG  +EA+ L  +MEK+ L+ DDG F+               KK+H S  +SR +
Sbjct: 291 SGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFR 350

Query: 712 CCTVVSNALIDMYCKCGSLNRAWSVFNGMES-KDSVSWNSMIHGLAMHGHAQK 867
           C T V N+ IDMY KCG ++ A+ VFNGM++ KD VSWNSMIHG  +HGH +K
Sbjct: 351 CSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEK 403



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 70/314 (22%), Positives = 120/314 (38%), Gaps = 43/314 (13%)
 Frame = +1

Query: 55  LKACSGLKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCGLMGVREAKMAFDVMEERDLV 234
           L  C+    +K IHA L K +L+ D ++   LI +YS      +  A   F+ + + ++ 
Sbjct: 29  LHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTN--NLSSAVNVFNQVPDPNVH 86

Query: 235 TYNSMISGLVKAGELKEAKKLFDEMPQ--------------------RDRVSW------- 333
            YN +I     +G    +   F  + +                        SW       
Sbjct: 87  LYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMV 146

Query: 334 ----------------NTILDGYVKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDV 465
                           N+++D Y + GD+  A ++F  M  RDVVSW++++ G  K GD+
Sbjct: 147 HAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDL 206

Query: 466 EMAKVLFDNMPVKNLVTWTIMISGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXX 645
           + A  +FD MP ++ V+W  M+ G+ + G   +A  L+ +M                   
Sbjct: 207 DGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERM------------------- 247

Query: 646 XXXXXXXXXKKVHRSITKSRTKCCTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWN 825
                        R I    T  C          Y K G ++ A  +F+    K+ V W 
Sbjct: 248 -----------AERDIVSWSTMVCG---------YSKNGDMDMARMLFDRCPVKNLVLWT 287

Query: 826 SMIHGLAMHGHAQK 867
           ++I G A  G  ++
Sbjct: 288 TIISGYAEKGQVKE 301


>ref|XP_002875497.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297321335|gb|EFH51756.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 629

 Score =  325 bits (832), Expect = 2e-86
 Identities = 161/293 (54%), Positives = 206/293 (70%), Gaps = 5/293 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSGLK---SVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           EM+  G+  DN+TY FLLKACSGL     VKM+H H+EK  L SD++VPN+LID YS+CG
Sbjct: 107 EMQRFGLFADNFTYPFLLKACSGLSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG 166

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
            +GVR+A   F+ M ERD V++NSM+ GLVKAGEL++A+KLFDEMPQRD +SWNT+LDGY
Sbjct: 167 GLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARKLFDEMPQRDLISWNTMLDGY 226

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNM--PVKNLVTWTIM 528
            +  +M  AFELFEKMP R+ VSWST++ GY+K GD+EMA+V+FD M  P KN+VTWTI+
Sbjct: 227 ARCREMSRAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPFPAKNVVTWTII 286

Query: 529 ISGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRT 708
           I+GYAEKGL +EA  L  QM  + L+ D    +                + H  I KS  
Sbjct: 287 IAGYAEKGLLKEADKLVDQMVASGLRFDAAAAISILAACAESGLLSLGMRAHSIIKKSNL 346

Query: 709 KCCTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
                V NAL+DMY KCGSL +A+ VFN M  KD VSWN+M+HGL +HGH ++
Sbjct: 347 NSNASVLNALLDMYAKCGSLKKAFDVFNDMPKKDLVSWNTMLHGLGVHGHGKE 399


>ref|XP_004491871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cicer arietinum]
          Length = 442

 Score =  323 bits (828), Expect = 5e-86
 Identities = 156/292 (53%), Positives = 207/292 (70%), Gaps = 4/292 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           +M+ +G+LPDN+TY F+LK C+G   L  V+M+HAH+EK   Y D+FVPNSLID Y +CG
Sbjct: 125 KMQVNGVLPDNFTYPFVLKGCNGRKWLSLVRMVHAHVEKLGFYGDIFVPNSLIDCYCRCG 184

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
              V  A   F  MEERD+V++NSM+ GLVK G+   A K+FDEMP+RD VSWNT+LDG+
Sbjct: 185 --SVDTAMRFFLGMEERDVVSWNSMVGGLVKCGDFDGALKMFDEMPERDMVSWNTVLDGF 242

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            K+ +M  AF++FE+M  RD++SWST++ GY+K GD++MA++LFD  P+KNLV WT +IS
Sbjct: 243 AKAREMEKAFDVFERMGERDIISWSTMVCGYSKKGDMDMARMLFDRCPMKNLVLWTTIIS 302

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKG  +EA GLY +ME+  L+ +DG  +               KK+H SI K R +C
Sbjct: 303 GYAEKGQVKEATGLYDEMEEAGLRPNDGFLISILAACAESGMLGLGKKIHDSIQKCRFRC 362

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGME-SKDSVSWNSMIHGLAMHGHAQK 867
            T V NA IDMY KCG L+ A+ VF+GM+  KD VSWNSMIHG  +HGH +K
Sbjct: 363 STKVLNAFIDMYAKCGCLDAAFGVFSGMKVKKDLVSWNSMIHGFGIHGHGEK 414


>ref|XP_006290777.1| hypothetical protein CARUB_v10016882mg [Capsella rubella]
           gi|482559484|gb|EOA23675.1| hypothetical protein
           CARUB_v10016882mg [Capsella rubella]
          Length = 601

 Score =  323 bits (828), Expect = 5e-86
 Identities = 160/293 (54%), Positives = 206/293 (70%), Gaps = 5/293 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           EM+  G+  DN+TY FLLKACSG   L  VKMIH H+EK  L SD++VPN+LID Y +CG
Sbjct: 108 EMQRFGLFADNFTYPFLLKACSGQSWLPVVKMIHNHIEKLGLSSDIYVPNALIDCYCRCG 167

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
            +GVREA   F+ M ERD V++NSM+ GLVKAGEL++A++LFDEMPQRD +SWNT+LDGY
Sbjct: 168 GLGVREAMKLFEKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPQRDLISWNTMLDGY 227

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPV--KNLVTWTIM 528
            +  +M  AFELFEKMP R  VSWST++ GY+K GD+EMAK++FD MP+  KN+VTWTI+
Sbjct: 228 ARCREMSKAFELFEKMPERSTVSWSTMVMGYSKAGDMEMAKIMFDKMPLPAKNVVTWTII 287

Query: 529 ISGYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRT 708
           I+GYAEKGL +EA  L  QM  + L+ D    +                +VH  I ++  
Sbjct: 288 IAGYAEKGLMKEADRLVDQMVASGLRFDAAAAISILAACAESGLLGLGMRVHSIIKRTNL 347

Query: 709 KCCTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
                V NAL+DMY KCGS+ +A+ VFN M  KD VSWNSM+HGL +HGH ++
Sbjct: 348 NSNASVLNALLDMYAKCGSVEKAFDVFNNMPKKDLVSWNSMLHGLGVHGHGKE 400


>ref|XP_006395295.1| hypothetical protein EUTSA_v10003866mg [Eutrema salsugineum]
           gi|557091934|gb|ESQ32581.1| hypothetical protein
           EUTSA_v10003866mg [Eutrema salsugineum]
          Length = 598

 Score =  322 bits (824), Expect = 1e-85
 Identities = 157/291 (53%), Positives = 202/291 (69%), Gaps = 3/291 (1%)
 Frame = +1

Query: 4   EMRWSGILPDNYTYLFLLKACSG---LKSVKMIHAHLEKYNLYSDLFVPNSLIDAYSKCG 174
           EM+  G+  DN+TY FLLKACSG   L  VKM+H H+EK  L SD++VPN+LID YS+CG
Sbjct: 107 EMQRIGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG 166

Query: 175 LMGVREAKMAFDVMEERDLVTYNSMISGLVKAGELKEAKKLFDEMPQRDRVSWNTILDGY 354
            MGV+ A   F  M ERD V++NSM+ GLVKAGEL++A++LFDEMP RD +SWNT+LDGY
Sbjct: 167 AMGVKAAMKLFVKMGERDTVSWNSMLGGLVKAGELRDARQLFDEMPHRDLISWNTMLDGY 226

Query: 355 VKSGDMISAFELFEKMPSRDVVSWSTVIFGYAKTGDVEMAKVLFDNMPVKNLVTWTIMIS 534
            +  DM  AF+LFE+MP R+ VSWST++ GY+K GD+EMA+++FD MP KN+VTWTI+I+
Sbjct: 227 ARCRDMTRAFQLFEQMPERNTVSWSTMVMGYSKAGDMEMARIMFDKMPAKNVVTWTIIIA 286

Query: 535 GYAEKGLAREAIGLYGQMEKTKLQADDGTFVXXXXXXXXXXXXXXXKKVHRSITKSRTKC 714
           GYAEKGL +EA  L  QM    L+ D    +                +VH +I +S    
Sbjct: 287 GYAEKGLVKEADRLVDQMVNAGLKFDAAAAISILAACAESGLLSLGMRVHSTIKRSNLGS 346

Query: 715 CTVVSNALIDMYCKCGSLNRAWSVFNGMESKDSVSWNSMIHGLAMHGHAQK 867
              V NAL+DMY KCG L RA+ VFN M  KD VSWN+M+ GL +HGH +K
Sbjct: 347 NAYVLNALLDMYAKCGCLERAFDVFNNMPKKDLVSWNTMLQGLGVHGHGKK 397