BLASTX nr result
ID: Rehmannia26_contig00030879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030879
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 127 2e-27
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 124 2e-26
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 120 2e-25
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 104 1e-20
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 104 1e-20
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 102 4e-20
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 102 4e-20
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr... 102 4e-20
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr... 102 4e-20
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 101 1e-19
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 99 6e-19
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 99 8e-19
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 98 1e-18
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 97 3e-18
emb|CAB83107.1| sigma factor 3 [Sinapis alba] 97 3e-18
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 96 4e-18
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 96 6e-18
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 96 6e-18
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 95 8e-18
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 95 8e-18
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 127 bits (319), Expect = 2e-27
Identities = 59/87 (67%), Positives = 74/87 (85%)
Frame = -1
Query: 261 SETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQI 82
++ I D QQPK S +RT SRNKRQKIA+NEAEMS GVK+VA+LE++R ILEEETG++
Sbjct: 232 TKNIQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRV 291
Query: 81 ASLSSWAEAAGIKKKELQQHLHYGWHC 1
A+ SSWAEAAGI++KELQQ LH+GW+C
Sbjct: 292 ATFSSWAEAAGIEQKELQQRLHFGWYC 318
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 124 bits (310), Expect = 2e-26
Identities = 58/87 (66%), Positives = 73/87 (83%)
Frame = -1
Query: 261 SETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQI 82
++ I D QQ K S +RT SR KRQKIA+NEAEMS GVK+VA+LE++R ILEEETGQ+
Sbjct: 228 TKNIQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQV 287
Query: 81 ASLSSWAEAAGIKKKELQQHLHYGWHC 1
A+ SSWA+AAGI++KELQQHLH+GW+C
Sbjct: 288 ATFSSWAKAAGIEQKELQQHLHFGWYC 314
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 120 bits (300), Expect = 2e-25
Identities = 59/99 (59%), Positives = 76/99 (76%)
Frame = -1
Query: 297 EKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 118
E + IS Q + S T+ FQ+PKV+S +R S SR++R +IARNEAEMS GVK+VA LE+
Sbjct: 512 ENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLER 571
Query: 117 LRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+R LEEETG+ ASLS WAEAAG+ +K LQQHL +GW+C
Sbjct: 572 IRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYC 610
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 104 bits (260), Expect = 1e-20
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -1
Query: 297 EKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 118
EK I L S+TI + +P V++ +RT SR KR A+NEAEMS GVK+VA LE+
Sbjct: 225 EKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLER 284
Query: 117 LRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+R LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+C
Sbjct: 285 IRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYC 323
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 104 bits (260), Expect = 1e-20
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -1
Query: 297 EKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 118
EK I L S+TI + +P V++ +RT SR KR A+NEAEMS GVK+VA LE+
Sbjct: 275 EKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLER 334
Query: 117 LRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+R LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+C
Sbjct: 335 IRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYC 373
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 102 bits (255), Expect = 4e-20
Identities = 48/100 (48%), Positives = 70/100 (70%)
Frame = -1
Query: 300 SEKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELE 121
SE+ S+ L SE + +QP + SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 120 KLRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+++ LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+C
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYC 296
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 102 bits (255), Expect = 4e-20
Identities = 48/100 (48%), Positives = 70/100 (70%)
Frame = -1
Query: 300 SEKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELE 121
SE+ S+ L SE + +QP + SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 120 KLRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+++ LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+C
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYC 296
>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917506|ref|XP_006450759.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553984|gb|ESR63998.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553985|gb|ESR63999.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 383
Score = 102 bits (255), Expect = 4e-20
Identities = 48/100 (48%), Positives = 70/100 (70%)
Frame = -1
Query: 300 SEKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELE 121
SE+ S+ L SE + +QP + SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 120 KLRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+++ LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+C
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYC 296
>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917512|ref|XP_006450762.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553983|gb|ESR63997.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553988|gb|ESR64002.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 381
Score = 102 bits (255), Expect = 4e-20
Identities = 48/100 (48%), Positives = 70/100 (70%)
Frame = -1
Query: 300 SEKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELE 121
SE+ S+ L SE + +QP + SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 120 KLRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+++ LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+C
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYC 296
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 101 bits (251), Expect = 1e-19
Identities = 44/80 (55%), Positives = 65/80 (81%)
Frame = -1
Query: 240 FQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQIASLSSWA 61
F++P +S RR S SR++R +A+NEAEMS GVK++A+LE+L++ LE+ETG++ +L WA
Sbjct: 227 FKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWA 286
Query: 60 EAAGIKKKELQQHLHYGWHC 1
EAAG+ +K LQQ LH+GW+C
Sbjct: 287 EAAGVDEKVLQQQLHFGWYC 306
>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
gi|482559522|gb|EOA23713.1| hypothetical protein
CARUB_v10016920mg [Capsella rubella]
Length = 581
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/71 (61%), Positives = 61/71 (85%)
Frame = -1
Query: 213 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQIASLSSWAEAAGIKKKE 34
RR + R KR++I+RNEAEMSTGVK+VA++E++R LEEE+G++ASLS WAEAAG+ +K
Sbjct: 272 RRPPKYRKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKL 331
Query: 33 LQQHLHYGWHC 1
L ++LHYGW+C
Sbjct: 332 LMRNLHYGWYC 342
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 98.6 bits (244), Expect = 8e-19
Identities = 44/94 (46%), Positives = 70/94 (74%)
Frame = -1
Query: 282 ISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMIL 103
+S L +TI + ++P ++S +R S R++R I++NEAEMS GVK++A+LE+++ L
Sbjct: 224 VSSNSLPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETL 283
Query: 102 EEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
E+ETG++A+L WAEAAG+ +K L QHL +GW+C
Sbjct: 284 EKETGKVATLRCWAEAAGVHEKVLLQHLRFGWYC 317
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 97.8 bits (242), Expect = 1e-18
Identities = 43/71 (60%), Positives = 61/71 (85%)
Frame = -1
Query: 213 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQIASLSSWAEAAGIKKKE 34
RR + R KR++I++NEAEMSTGVK+VA++E++R LEEE+G++ASLS WAEAAG+ +K
Sbjct: 259 RRPPKYRKKRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKL 318
Query: 33 LQQHLHYGWHC 1
L ++LHYGW+C
Sbjct: 319 LMRNLHYGWYC 329
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/89 (51%), Positives = 66/89 (74%)
Frame = -1
Query: 267 LLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETG 88
L S I ++P V+S ++ S+S+++R IARNEAEM+ G+K++A+LEK+R LEEET
Sbjct: 234 LPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETE 293
Query: 87 QIASLSSWAEAAGIKKKELQQHLHYGWHC 1
++ SLS WAEAAG+ K LQQ L +GW+C
Sbjct: 294 RVVSLSCWAEAAGLDVKVLQQQLSFGWYC 322
>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
Length = 567
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/87 (52%), Positives = 64/87 (73%)
Frame = -1
Query: 261 SETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQI 82
S T P+V P S+ R KR++I+RNEAEMS GVK+VA++E++R LEEETG++
Sbjct: 245 SRTTWEGIDVPRVRKP---SKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEETGKV 301
Query: 81 ASLSSWAEAAGIKKKELQQHLHYGWHC 1
AS+S WAEAAG+ +K L +LH+GW+C
Sbjct: 302 ASMSCWAEAAGMNQKLLMHNLHFGWYC 328
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/89 (52%), Positives = 64/89 (71%)
Frame = -1
Query: 267 LLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETG 88
L S+T+ + PK +RTS S ++R IARNEA+M+ GVK+ ++LE++R LEEETG
Sbjct: 235 LPSKTVQNNL--PKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETG 292
Query: 87 QIASLSSWAEAAGIKKKELQQHLHYGWHC 1
Q+ SLS WAEA G+ KK LQQ L +GW+C
Sbjct: 293 QVVSLSCWAEATGLDKKVLQQQLQFGWYC 321
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/100 (45%), Positives = 67/100 (67%)
Frame = -1
Query: 300 SEKESAISMQELLSETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELE 121
SE+ + L SE + +QP + S R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETYLLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 120 KLRMILEEETGQIASLSSWAEAAGIKKKELQQHLHYGWHC 1
+++ LE+E+G+ A L+ WA+AAG+ ++ L+QHL +GW+C
Sbjct: 257 RIKTTLEKESGKAARLNCWAQAAGVSERVLKQHLAFGWYC 296
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/87 (50%), Positives = 66/87 (75%)
Frame = -1
Query: 261 SETISRDFQQPKVASPRRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQI 82
S T D P++ R++S+ R KR++I+RNEAEMS G K+VA++E++R LEEE+G++
Sbjct: 240 SRTTWNDIDAPRL---RKSSKYRKKRERISRNEAEMSAGAKIVADMERIRTKLEEESGKV 296
Query: 81 ASLSSWAEAAGIKKKELQQHLHYGWHC 1
AS+S WAEAAG+ + L ++LHYGW+C
Sbjct: 297 ASMSCWAEAAGMNEILLMRNLHYGWYC 323
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/71 (59%), Positives = 59/71 (83%)
Frame = -1
Query: 213 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQIASLSSWAEAAGIKKKE 34
RR + R KR++I+RNE EMSTGVK+VA++E++R LEEE+G++ASLS WA AAG+ +K
Sbjct: 262 RRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKL 321
Query: 33 LQQHLHYGWHC 1
L ++LHYGW+C
Sbjct: 322 LMRNLHYGWYC 332
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/71 (59%), Positives = 59/71 (83%)
Frame = -1
Query: 213 RRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRMILEEETGQIASLSSWAEAAGIKKKE 34
RR + R KR++I+RNE EMSTGVK+VA++E++R LEEE+G++ASLS WA AAG+ +K
Sbjct: 262 RRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKL 321
Query: 33 LQQHLHYGWHC 1
L ++LHYGW+C
Sbjct: 322 LMRNLHYGWYC 332