BLASTX nr result
ID: Rehmannia26_contig00030878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030878
(344 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 107 2e-21
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 100 2e-19
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 97 2e-18
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 94 1e-17
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 94 1e-17
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr... 94 1e-17
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr... 94 1e-17
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 92 5e-17
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 92 5e-17
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 85 9e-15
gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis] 83 3e-14
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 83 3e-14
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 83 3e-14
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 81 2e-13
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 79 8e-13
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 79 8e-13
emb|CAB83107.1| sigma factor 3 [Sinapis alba] 79 8e-13
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 77 2e-12
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 76 4e-12
ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC ... 75 7e-12
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 107 bits (267), Expect = 2e-21
Identities = 57/114 (50%), Positives = 76/114 (66%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
+D V N + KV ++S + + + ++ I D QQPKF S +RT
Sbjct: 191 DDLVGNAIDKVVVRSRKKQERKSRRNRASRNANDIITVQPHTKNIQEDLQQPKFYSGKRT 250
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGIK 3
SRNKRQKIA+NEAEMS GVK+VA+LE++RSILEEETG++A+ SSWAEAAGI+
Sbjct: 251 QASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATFSSWAEAAGIE 304
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 100 bits (249), Expect = 2e-19
Identities = 55/114 (48%), Positives = 74/114 (64%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
+D V N + KV ++S + + + ++ I D QQ KF S +RT
Sbjct: 187 DDLVGNAMDKVVVRSRKKQERMSRRKRASRNANDIITVQPHTKNIQEDLQQLKFYSGKRT 246
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGIK 3
SR KRQKIA+NEAEMS GVK+VA+LE++RSILEEETGQ+A+ SSWA+AAGI+
Sbjct: 247 HASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATFSSWAKAAGIE 300
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = -1
Query: 242 LSLQELPSETISRDFQQPKFLSPRRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSIL 63
+S Q +PS T+ FQ+PK S +R S SR++R +IARNEAEMS GVKVVA LE++R+ L
Sbjct: 517 ISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTL 576
Query: 62 EEETGQIASLSSWAEAAGI 6
EEETG+ ASLS WAEAAG+
Sbjct: 577 EEETGRAASLSCWAEAAGV 595
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/113 (43%), Positives = 66/113 (58%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
NDS D H+ K+ + S SL LPSE + +QP SP R
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR +R IARNEAEMS GV+VVA LE++++ LE+E+G+ ASL+ WA+AAG+
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGV 281
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/113 (43%), Positives = 66/113 (58%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
NDS D H+ K+ + S SL LPSE + +QP SP R
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR +R IARNEAEMS GV+VVA LE++++ LE+E+G+ ASL+ WA+AAG+
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGV 281
>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917506|ref|XP_006450759.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553984|gb|ESR63998.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553985|gb|ESR63999.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 383
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/113 (43%), Positives = 66/113 (58%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
NDS D H+ K+ + S SL LPSE + +QP SP R
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR +R IARNEAEMS GV+VVA LE++++ LE+E+G+ ASL+ WA+AAG+
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGV 281
>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917512|ref|XP_006450762.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553983|gb|ESR63997.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553988|gb|ESR64002.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 381
Score = 94.4 bits (233), Expect = 1e-17
Identities = 49/113 (43%), Positives = 66/113 (58%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
NDS D H+ K+ + S SL LPSE + +QP SP R
Sbjct: 169 NDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETSLLSLPSEALQEGLKQPTIFSPERA 228
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR +R IARNEAEMS GV+VVA LE++++ LE+E+G+ ASL+ WA+AAG+
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAASLNCWAQAAGV 281
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 92.4 bits (228), Expect = 5e-17
Identities = 50/113 (44%), Positives = 69/113 (61%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
N +VD+H+ KV ++SG + LPS+TI + +P + +RT
Sbjct: 196 NGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRT 255
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR KR A+NEAEMS GVK+VA LE++R+ LEEE G +ASLS+WAEAAG+
Sbjct: 256 LNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGV 308
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 92.4 bits (228), Expect = 5e-17
Identities = 50/113 (44%), Positives = 69/113 (61%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
N +VD+H+ KV ++SG + LPS+TI + +P + +RT
Sbjct: 246 NGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRT 305
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR KR A+NEAEMS GVK+VA LE++R+ LEEE G +ASLS+WAEAAG+
Sbjct: 306 LNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGV 358
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/113 (39%), Positives = 63/113 (55%)
Frame = -1
Query: 344 NDSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRT 165
+DS D H+ K+ + S L LPSE + +QP S R
Sbjct: 169 DDSRDYHMGKILVPSKRKGKRKLKTARVSEESIETYLLSLPSEALQEGLKQPTIFSAERA 228
Query: 164 SRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
SR +R IARNEAEMS GV+VVA LE++++ LE+E+G+ A L+ WA+AAG+
Sbjct: 229 LNSRGRRLMIARNEAEMSKGVQVVANLERIKTTLEKESGKAARLNCWAQAAGV 281
>gb|EXB75636.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 476
Score = 83.2 bits (204), Expect = 3e-14
Identities = 42/79 (53%), Positives = 58/79 (73%)
Frame = -1
Query: 242 LSLQELPSETISRDFQQPKFLSPRRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSIL 63
LS + L S+ I +D + S RR SR++R+ A+NEAEMS+GVKVVA+LE++R+ L
Sbjct: 189 LSSRSLSSDAIWQDLHKSSASSVRRAVNSRSRRRACAKNEAEMSTGVKVVAKLEQIRTAL 248
Query: 62 EEETGQIASLSSWAEAAGI 6
E+ETG +AS S WAEAAG+
Sbjct: 249 EKETGSVASFSCWAEAAGV 267
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/109 (39%), Positives = 68/109 (62%)
Frame = -1
Query: 332 DNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRTSRSR 153
DN+V ++ ++SG +S LP +TI + ++P S +R S R
Sbjct: 196 DNNVGEIIVRSGKKEERRSRKRTSDNAI--VSSNSLPPKTIWKGLKKPTLSSGKRASNYR 253
Query: 152 NKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
++R I++NEAEMS GVKV+A+LE+++ LE+ETG++A+L WAEAAG+
Sbjct: 254 SRRLTISKNEAEMSIGVKVIADLERIKETLEKETGKVATLRCWAEAAGV 302
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 83.2 bits (204), Expect = 3e-14
Identities = 40/74 (54%), Positives = 57/74 (77%)
Frame = -1
Query: 227 LPSETISRDFQQPKFLSPRRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETG 48
LPS+T+ + +P F+ +RTS S ++R IARNEA+M+ GVKV ++LE++R+ LEEETG
Sbjct: 235 LPSKTVQNNLPKPTFV--KRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETG 292
Query: 47 QIASLSSWAEAAGI 6
Q+ SLS WAEA G+
Sbjct: 293 QVVSLSCWAEATGL 306
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/74 (52%), Positives = 56/74 (75%)
Frame = -1
Query: 227 LPSETISRDFQQPKFLSPRRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETG 48
LPS I ++P S ++ S+S+++R IARNEAEM+ G+KV+A+LEK+R+ LEEET
Sbjct: 234 LPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETE 293
Query: 47 QIASLSSWAEAAGI 6
++ SLS WAEAAG+
Sbjct: 294 RVVSLSCWAEAAGL 307
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/74 (51%), Positives = 55/74 (74%)
Frame = -1
Query: 227 LPSETISRDFQQPKFLSPRRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETG 48
LP + + F++P S RR S SR++R +A+NEAEMS GVKV+A+LE+L+ LE+ETG
Sbjct: 218 LPVKQMREGFKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETG 277
Query: 47 QIASLSSWAEAAGI 6
++ +L WAEAAG+
Sbjct: 278 KVPTLRCWAEAAGV 291
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/72 (51%), Positives = 56/72 (77%)
Frame = -1
Query: 221 SETISRDFQQPKFLSPRRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQI 42
S T D P+ R++S+ R KR++I+RNEAEMS+G K+VA++E++R+ LEEE+G++
Sbjct: 240 SRTTWNDIDAPRL---RKSSKYRKKRERISRNEAEMSAGAKIVADMERIRTKLEEESGKV 296
Query: 41 ASLSSWAEAAGI 6
AS+S WAEAAG+
Sbjct: 297 ASMSCWAEAAGM 308
>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
Length = 567
Score = 78.6 bits (192), Expect = 8e-13
Identities = 35/56 (62%), Positives = 50/56 (89%)
Frame = -1
Query: 173 RRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
R+ S+ R KR++I+RNEAEMS GVK+VA++E++R+ LEEETG++AS+S WAEAAG+
Sbjct: 258 RKPSKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEETGKVASMSCWAEAAGM 313
>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
gi|482559522|gb|EOA23713.1| hypothetical protein
CARUB_v10016920mg [Capsella rubella]
Length = 581
Score = 77.4 bits (189), Expect = 2e-12
Identities = 35/56 (62%), Positives = 50/56 (89%)
Frame = -1
Query: 173 RRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
RR + R KR++I+RNEAEMS+GVK+VA++E++R+ LEEE+G++ASLS WAEAAG+
Sbjct: 272 RRPPKYRKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGM 327
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 76.3 bits (186), Expect = 4e-12
Identities = 34/56 (60%), Positives = 50/56 (89%)
Frame = -1
Query: 173 RRTSRSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
RR + R KR++I++NEAEMS+GVK+VA++E++R+ LEEE+G++ASLS WAEAAG+
Sbjct: 259 RRPPKYRKKRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGM 314
>ref|XP_006601060.1| PREDICTED: RNA polymerase sigma factor sigC isoform X3 [Glycine
max]
Length = 459
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/112 (39%), Positives = 64/112 (57%)
Frame = -1
Query: 341 DSVDNHVSKVFIQSGXXXXXXXXXXXXXXXXSALSLQELPSETISRDFQQPKFLSPRRTS 162
D VD++ KV +QS A+S Q L + D +R
Sbjct: 188 DKVDDYKDKVVVQSSKKKENKTRRKREFVST-AVSSQSLTLKANQEDLLGFSASLVKRAP 246
Query: 161 RSRNKRQKIARNEAEMSSGVKVVAELEKLRSILEEETGQIASLSSWAEAAGI 6
++NKR +A+ EAEMS GVKV+AELEK+R+ +EE+T ++ASLS+WAEA+G+
Sbjct: 247 NTKNKRILVAKREAEMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGV 298