BLASTX nr result
ID: Rehmannia26_contig00030877
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030877
(318 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-... 136 3e-30
ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-... 132 4e-29
gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobrom... 126 3e-27
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ... 114 1e-23
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera] 114 1e-23
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu... 110 2e-22
ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citr... 108 6e-22
ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citr... 108 6e-22
ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citr... 108 6e-22
ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citr... 108 6e-22
ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-... 107 2e-21
ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Caps... 107 2e-21
ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp.... 105 5e-21
emb|CAB83107.1| sigma factor 3 [Sinapis alba] 104 1e-20
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [... 102 4e-20
ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis tha... 102 7e-20
dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 102 7e-20
ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-... 102 7e-20
ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutr... 102 7e-20
gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus pe... 101 1e-19
>ref|XP_006355305.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
tuberosum]
Length = 555
Score = 136 bits (342), Expect = 3e-30
Identities = 64/90 (71%), Positives = 79/90 (87%)
Frame = -1
Query: 270 ISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASL 91
I D QQPKF S RT SRNKRQKIA+NEAEMS GVK+VA+LE++R+ILEEETG++A+
Sbjct: 235 IQEDLQQPKFYSGKRTQASRNKRQKIAKNEAEMSRGVKLVAQLERIRSILEEETGRVATF 294
Query: 90 SSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
SSWAEAAGI++KELQQ L++GW+CRDELL+
Sbjct: 295 SSWAEAAGIEQKELQQRLHFGWYCRDELLK 324
>ref|XP_004245130.1| PREDICTED: RNA polymerase sigma factor sigC-like [Solanum
lycopersicum]
Length = 551
Score = 132 bits (333), Expect = 4e-29
Identities = 63/90 (70%), Positives = 78/90 (86%)
Frame = -1
Query: 270 ISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASL 91
I D QQ KF S RT SR KRQKIA+NEAEMS GVK+VA+LE++R+ILEEETGQ+A+
Sbjct: 231 IQEDLQQLKFYSGKRTHASRTKRQKIAKNEAEMSKGVKLVAQLERIRSILEEETGQVATF 290
Query: 90 SSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
SSWA+AAGI++KELQQHL++GW+CRDELL+
Sbjct: 291 SSWAKAAGIEQKELQQHLHFGWYCRDELLK 320
>gb|EOY29838.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
Length = 848
Score = 126 bits (317), Expect = 3e-27
Identities = 64/105 (60%), Positives = 80/105 (76%)
Frame = -1
Query: 315 EKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 136
E + I Q + S+T+ FQ+PK S R S SR++R +IARNEAEMS GVK+VA LE+
Sbjct: 512 ENPTIISTQLMPSNTLHGRFQKPKVSSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLER 571
Query: 135 LRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+RT LEEETG+ ASLS WAEAAG+ +K LQQHL +GW+CRDELLR
Sbjct: 572 IRTTLEEETGRAASLSCWAEAAGVSEKVLQQHLRFGWYCRDELLR 616
>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
gi|296081598|emb|CBI20603.3| unnamed protein product
[Vitis vinifera]
Length = 561
Score = 114 bits (285), Expect = 1e-23
Identities = 60/105 (57%), Positives = 72/105 (68%)
Frame = -1
Query: 315 EKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 136
EK IY L S TI + +P + RT SR KR A+NEAEMS GVK+VA LE+
Sbjct: 225 EKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLER 284
Query: 135 LRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+R LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDELLR
Sbjct: 285 IRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLR 329
>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
Length = 611
Score = 114 bits (285), Expect = 1e-23
Identities = 60/105 (57%), Positives = 72/105 (68%)
Frame = -1
Query: 315 EKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEK 136
EK IY L S TI + +P + RT SR KR A+NEAEMS GVK+VA LE+
Sbjct: 275 EKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLER 334
Query: 135 LRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+R LEEE G +ASLS+WAEAAG+ KK LQQ L +GW+CRDELLR
Sbjct: 335 IRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLR 379
>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
gi|222854562|gb|EEE92109.1| hypothetical protein
POPTR_0006s25090g [Populus trichocarpa]
Length = 559
Score = 110 bits (275), Expect = 2e-22
Identities = 53/95 (55%), Positives = 71/95 (74%)
Frame = -1
Query: 285 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 106
L S T+ + +P FV RTS S ++R IARNEA+M+ GVK+ ++LE++RT LEEETG
Sbjct: 235 LPSKTVQNNLPKPTFVK--RTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETG 292
Query: 105 QIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
Q+ SLS WAEA G+ KK LQQ L +GW+CRDEL++
Sbjct: 293 QVVSLSCWAEATGLDKKVLQQQLQFGWYCRDELIK 327
>ref|XP_006450764.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553990|gb|ESR64004.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 442
Score = 108 bits (271), Expect = 6e-22
Identities = 51/106 (48%), Positives = 75/106 (70%)
Frame = -1
Query: 318 SEKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELE 139
SE+ L L S+ + +QP SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 138 KLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+++T LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+CR+EL++
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIK 302
>ref|XP_006450763.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|557553989|gb|ESR64003.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 534
Score = 108 bits (271), Expect = 6e-22
Identities = 51/106 (48%), Positives = 75/106 (70%)
Frame = -1
Query: 318 SEKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELE 139
SE+ L L S+ + +QP SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 138 KLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+++T LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+CR+EL++
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIK 302
>ref|XP_006450758.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917506|ref|XP_006450759.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553984|gb|ESR63998.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553985|gb|ESR63999.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 383
Score = 108 bits (271), Expect = 6e-22
Identities = 51/106 (48%), Positives = 75/106 (70%)
Frame = -1
Query: 318 SEKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELE 139
SE+ L L S+ + +QP SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 138 KLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+++T LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+CR+EL++
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIK 302
>ref|XP_006450757.1| hypothetical protein CICLE_v10007968mg [Citrus clementina]
gi|567917512|ref|XP_006450762.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553983|gb|ESR63997.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
gi|557553988|gb|ESR64002.1| hypothetical protein
CICLE_v10007968mg [Citrus clementina]
Length = 381
Score = 108 bits (271), Expect = 6e-22
Identities = 51/106 (48%), Positives = 75/106 (70%)
Frame = -1
Query: 318 SEKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELE 139
SE+ L L S+ + +QP SP R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETSLLSLPSEALQEGLKQPTIFSPERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 138 KLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+++T LE+E+G+ ASL+ WA+AAG+ ++ L+QHL +GW+CR+EL++
Sbjct: 257 RIKTTLEKESGKAASLNCWAQAAGVSERVLKQHLAFGWYCREELIK 302
>ref|XP_006475980.1| PREDICTED: RNA polymerase sigma factor sigC-like [Citrus sinensis]
Length = 534
Score = 107 bits (267), Expect = 2e-21
Identities = 50/106 (47%), Positives = 74/106 (69%)
Frame = -1
Query: 318 SEKESAIYLQELSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELE 139
SE+ YL L S+ + +QP S R SR +R IARNEAEMS GV++VA LE
Sbjct: 197 SEESIETYLLSLPSEALQEGLKQPTIFSAERALNSRGRRLMIARNEAEMSKGVQVVANLE 256
Query: 138 KLRTILEEETGQIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
+++T LE+E+G+ A L+ WA+AAG+ ++ L+QHL +GW+CR+EL++
Sbjct: 257 RIKTTLEKESGKAARLNCWAQAAGVSERVLKQHLAFGWYCREELIK 302
>ref|XP_006290815.1| hypothetical protein CARUB_v10016920mg [Capsella rubella]
gi|482559522|gb|EOA23713.1| hypothetical protein
CARUB_v10016920mg [Capsella rubella]
Length = 581
Score = 107 bits (266), Expect = 2e-21
Identities = 48/76 (63%), Positives = 67/76 (88%)
Frame = -1
Query: 228 RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 49
R + R KR++I+RNEAEMSTGVK+VA++E++RT LEEE+G++ASLS WAEAAG+ +K L
Sbjct: 273 RPPKYRKKRERISRNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLL 332
Query: 48 QQHLYYGWHCRDELLR 1
++L+YGW+CRDELL+
Sbjct: 333 MRNLHYGWYCRDELLK 348
>ref|XP_002877947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297323785|gb|EFH54206.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 568
Score = 105 bits (263), Expect = 5e-21
Identities = 47/76 (61%), Positives = 67/76 (88%)
Frame = -1
Query: 228 RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 49
R + R KR++I++NEAEMSTGVK+VA++E++RT LEEE+G++ASLS WAEAAG+ +K L
Sbjct: 260 RPPKYRKKRERISKNEAEMSTGVKIVADMERIRTQLEEESGKVASLSCWAEAAGMNEKLL 319
Query: 48 QQHLYYGWHCRDELLR 1
++L+YGW+CRDELL+
Sbjct: 320 MRNLHYGWYCRDELLK 335
>emb|CAB83107.1| sigma factor 3 [Sinapis alba]
Length = 567
Score = 104 bits (259), Expect = 1e-20
Identities = 50/95 (52%), Positives = 72/95 (75%)
Frame = -1
Query: 285 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 106
+SS T P+ P S+ R KR++I+RNEAEMS GVK+VA++E++RT LEEETG
Sbjct: 243 ISSRTTWEGIDVPRVRKP---SKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEETG 299
Query: 105 QIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
++AS+S WAEAAG+ +K L +L++GW+CRDEL++
Sbjct: 300 KVASMSCWAEAAGMNQKLLMHNLHFGWYCRDELVK 334
>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 560
Score = 102 bits (255), Expect = 4e-20
Identities = 50/95 (52%), Positives = 70/95 (73%)
Frame = -1
Query: 285 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 106
L S I ++P S + S+S+++R IARNEAEM+ G+K++A+LEK+RT LEEET
Sbjct: 234 LPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETE 293
Query: 105 QIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
++ SLS WAEAAG+ K LQQ L +GW+CRDEL++
Sbjct: 294 RVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIK 328
>ref|NP_190960.1| RNA polymerase sigma-subunit C [Arabidopsis thaliana]
gi|75098239|sp|O24621.1|SIGC_ARATH RecName: Full=RNA
polymerase sigma factor sigC; Short=Sigma factor C;
Short=Sigma-C; AltName: Full=RNA polymerase sigma factor
sig3; Short=Atsig3; Short=Sigma factor 3; Flags:
Precursor gi|2353175|gb|AAB69386.1| sigma factor 3
[Arabidopsis thaliana] gi|2463554|dbj|BAA22530.1| SigC
[Arabidopsis thaliana] gi|5478585|dbj|BAA82450.1| sigma
factor SigC [Arabidopsis thaliana]
gi|7630012|emb|CAB88354.1| sigma factor SigC
[Arabidopsis thaliana] gi|133778870|gb|ABO38775.1|
At3g53920 [Arabidopsis thaliana]
gi|332645638|gb|AEE79159.1| RNApolymerase sigma-subunit
C [Arabidopsis thaliana]
Length = 571
Score = 102 bits (253), Expect = 7e-20
Identities = 45/76 (59%), Positives = 65/76 (85%)
Frame = -1
Query: 228 RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 49
R + R KR++I+RNE EMSTGVK+VA++E++RT LEEE+G++ASLS WA AAG+ +K L
Sbjct: 263 RPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLL 322
Query: 48 QQHLYYGWHCRDELLR 1
++L+YGW+CRDEL++
Sbjct: 323 MRNLHYGWYCRDELVK 338
>dbj|BAA22215.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 571
Score = 102 bits (253), Expect = 7e-20
Identities = 45/76 (59%), Positives = 65/76 (85%)
Frame = -1
Query: 228 RTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWAEAAGIKKKEL 49
R + R KR++I+RNE EMSTGVK+VA++E++RT LEEE+G++ASLS WA AAG+ +K L
Sbjct: 263 RPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEEESGKVASLSCWAAAAGMNEKLL 322
Query: 48 QQHLYYGWHCRDELLR 1
++L+YGW+CRDEL++
Sbjct: 323 MRNLHYGWYCRDELVK 338
>ref|XP_004291147.1| PREDICTED: RNA polymerase sigma factor sigC-like [Fragaria vesca
subsp. vesca]
Length = 545
Score = 102 bits (253), Expect = 7e-20
Identities = 46/86 (53%), Positives = 68/86 (79%)
Frame = -1
Query: 258 FQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETGQIASLSSWA 79
F++P S R S SR++R +A+NEAEMS GVK++A+LE+L+ LE+ETG++ +L WA
Sbjct: 227 FKKPNPSSVRRASNSRSRRLMMAKNEAEMSVGVKVIADLERLKVTLEKETGKVPTLRCWA 286
Query: 78 EAAGIKKKELQQHLYYGWHCRDELLR 1
EAAG+ +K LQQ L++GW+C+DEL+R
Sbjct: 287 EAAGVDEKVLQQQLHFGWYCQDELVR 312
>ref|XP_006403640.1| hypothetical protein EUTSA_v10010251mg [Eutrema salsugineum]
gi|312281919|dbj|BAJ33825.1| unnamed protein product
[Thellungiella halophila] gi|557104759|gb|ESQ45093.1|
hypothetical protein EUTSA_v10010251mg [Eutrema
salsugineum]
Length = 562
Score = 102 bits (253), Expect = 7e-20
Identities = 48/95 (50%), Positives = 72/95 (75%)
Frame = -1
Query: 285 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 106
+ S T D P+ ++S+ R KR++I+RNEAEMS G K+VA++E++RT LEEE+G
Sbjct: 238 IGSRTTWNDIDAPRLR---KSSKYRKKRERISRNEAEMSAGAKIVADMERIRTKLEEESG 294
Query: 105 QIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
++AS+S WAEAAG+ + L ++L+YGW+CRDELL+
Sbjct: 295 KVASMSCWAEAAGMNEILLMRNLHYGWYCRDELLK 329
>gb|EMJ24122.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
Length = 555
Score = 101 bits (251), Expect = 1e-19
Identities = 47/95 (49%), Positives = 70/95 (73%)
Frame = -1
Query: 285 LSSDTISRDFQQPKFVSPIRTSRSRNKRQKIARNEAEMSTGVKMVAELEKLRTILEEETG 106
L TI + ++P S R S R++R I++NEAEMS GVK++A+LE+++ LE+ETG
Sbjct: 229 LPPKTIWKGLKKPTLSSGKRASNYRSRRLTISKNEAEMSIGVKVIADLERIKETLEKETG 288
Query: 105 QIASLSSWAEAAGIKKKELQQHLYYGWHCRDELLR 1
++A+L WAEAAG+ +K L QHL +GW+C+DEL+R
Sbjct: 289 KVATLRCWAEAAGVHEKVLLQHLRFGWYCQDELIR 323