BLASTX nr result
ID: Rehmannia26_contig00030767
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030767
(678 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 210 3e-52
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 206 5e-51
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 206 5e-51
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 206 7e-51
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 204 3e-50
gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [... 203 3e-50
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 203 3e-50
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 203 3e-50
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 201 1e-49
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 199 5e-49
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 199 5e-49
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga... 198 1e-48
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 197 2e-48
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 197 3e-48
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 195 1e-47
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 194 3e-47
gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus pe... 193 5e-47
ref|XP_004298552.1| PREDICTED: putative ribonuclease H protein A... 192 6e-47
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 192 8e-47
gb|ABF97084.1| retrotransposon protein, putative, unclassified [... 192 8e-47
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 210 bits (535), Expect = 3e-52
Identities = 101/225 (44%), Positives = 142/225 (63%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
SE+ S + AV+ KS G+K + GP ++H+ FADD++ F +A + +MEI Y
Sbjct: 87 SEVLSVRLTRAVQDKSLLGIKLCRRGPTLSHMFFADDALFFLKATLGNVCRLMEIFKEYC 146
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
K SGQ +N EKSS +FS NTP++ + +++G +YLGLP GRSKKE Y
Sbjct: 147 KASGQLINGEKSSAYFSPNTPDQMSRLLGELMGFAEVEDPGKYLGLPTLWGRSKKEAVGY 206
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+++RVQ KL WK R LS AGKE+LIK+V ++P Y +ACFK P G+C I+ ++NFWW
Sbjct: 207 IVDRVQRKLVGWKQRSLSWAGKEILIKSVATAIPAYPMACFKFPKGVCDTINSALSNFWW 266
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
S N+ IHWK+W+ + K+ GGLGF D+ FN +LL K W
Sbjct: 267 GSTSTGNR-IHWKSWELLGKTKEEGGLGFRDLHQFNMSLLAKQCW 310
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 206 bits (524), Expect = 5e-51
Identities = 97/224 (43%), Positives = 137/224 (61%)
Frame = +2
Query: 5 EIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYNK 184
+I S+LI +G++ P ITHL FADDS+ FC+AN+ + ++ + Y
Sbjct: 805 DILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEY 864
Query: 185 LSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDYV 364
SGQK+N +KS I F Q+ + QIL N+ +YLGLP GR KKE F+Y+
Sbjct: 865 YSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYI 924
Query: 365 IERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWWK 544
I+RV+ + +W RFLSPAGKE+++K+V ++PVY ++CFKLP G+ +I ++ NFWW+
Sbjct: 925 IDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWE 984
Query: 545 SDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
N +GI W AWK + K GGLGF D+ FNDALL K W
Sbjct: 985 KASN-QRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAW 1027
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 206 bits (524), Expect = 5e-51
Identities = 97/224 (43%), Positives = 137/224 (61%)
Frame = +2
Query: 5 EIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYNK 184
+I S+LI +G++ P ITHL FADDS+ FC+AN+ + ++ + Y
Sbjct: 1031 DILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEY 1090
Query: 185 LSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDYV 364
SGQK+N +KS I F Q+ + QIL N+ +YLGLP GR KKE F+Y+
Sbjct: 1091 YSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYI 1150
Query: 365 IERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWWK 544
I+RV+ + +W RFLSPAGKE+++K+V ++PVY ++CFKLP G+ +I ++ NFWW+
Sbjct: 1151 IDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWE 1210
Query: 545 SDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
N +GI W AWK + K GGLGF D+ FNDALL K W
Sbjct: 1211 KASN-QRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAW 1253
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 206 bits (523), Expect = 7e-51
Identities = 94/225 (41%), Positives = 144/225 (64%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
++ FS L++ A +K G + + P+++HL FADDSI+F +A++ + ++V +I++ Y
Sbjct: 651 ADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYE 710
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+ SGQ+VN K+ + FS++ E ++AI +LG + +YLGLP IGRSKK TF
Sbjct: 711 RASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFAC 770
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+ ER+ KL WK + LS GKEVLIK+V ++P Y+++ F LP GL +I ++A FWW
Sbjct: 771 IKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWW 830
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
S + N+ +HW +W +C PK GGLGF D+ FN +LL K W
Sbjct: 831 GS-SDTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAW 874
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 204 bits (518), Expect = 3e-50
Identities = 95/225 (42%), Positives = 142/225 (63%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
++ FS +I V+ K G K S++GP I+HL FADDS++F AN + I+++ILN Y
Sbjct: 652 ADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYE 711
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
SGQK+N+EKS + +S+ ++ + IL + +YLG+P GRSKK FD
Sbjct: 712 LASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDS 771
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+I+R+ KL WK + LS AGKEVL+K+VI ++P Y++ +K P+ + +KI +A FWW
Sbjct: 772 LIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWW 831
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
S + + IHWK W +C K +GG+GF D+ +FNDALL + W
Sbjct: 832 GS-SDTQRKIHWKNWDSMCNLKCFGGMGFKDLTIFNDALLGRQAW 875
>gb|EMJ08998.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 203 bits (517), Expect = 3e-50
Identities = 100/225 (44%), Positives = 135/225 (60%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
S++FS ++ + KG+K ++ P+++HLLFADDS+ F A++ M +LN Y
Sbjct: 229 SDVFSKNLSKCISGGWIKGIKMAQRSPVLSHLLFADDSLFFLRADVTNCRRFMHLLNRYC 288
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
SGQ VN EKS ++FS NTP E + I IL YLG+P GRSKK +Y
Sbjct: 289 AASGQLVNHEKSCLYFSSNTPAELKTTIGSILAVEGTDNPGNYLGMPTMWGRSKKAAMNY 348
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
V ERV+ K+ WK LS AGKEVLIKA+ ++P + + CFK GLC +I+ +A FWW
Sbjct: 349 VKERVKDKILGWKQSSLSLAGKEVLIKAIATAIPTFPMQCFKFTKGLCDEINSEMAKFWW 408
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
N + IHWK+W +C+PK GGLGF D+ FN ALL K W
Sbjct: 409 -GKPNSDTKIHWKSWSALCLPKSDGGLGFRDLNTFNLALLGKQAW 452
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 203 bits (517), Expect = 3e-50
Identities = 96/225 (42%), Positives = 142/225 (63%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
++ FS ++ V K G K S+NGP I+HLLFADDS++F A + +++ILN Y
Sbjct: 655 ADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYE 714
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
SGQK+N+EKS + FS+ E + + +L + +YLG+P GRSKK F
Sbjct: 715 AASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRE 774
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+++R+ KL WK + LS AGKEVLIKAVI +LP Y++ +KLP+ + ++I +A FWW
Sbjct: 775 LLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWW 834
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
G+ + +HW +W+ +C PK GG+GF D+ +FNDALL K +W
Sbjct: 835 GGKGD-ERKMHWLSWEKMCKPKCMGGMGFKDLAVFNDALLGKQVW 878
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 203 bits (517), Expect = 3e-50
Identities = 96/224 (42%), Positives = 135/224 (60%)
Frame = +2
Query: 5 EIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYNK 184
+I S+LI +G++ P ITHL FADDS+ FC+AN+ + ++ + Y
Sbjct: 270 DILSHLIKVKASSGDIRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEY 329
Query: 185 LSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDYV 364
SGQK+N +KS I F Q + +L N+ +YLGLP GR KKE F+Y+
Sbjct: 330 YSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYI 389
Query: 365 IERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWWK 544
I+RV+ + SW +FLSPAGKE+L+K+V ++PVY ++CFKLP G+ +I ++ NFWW+
Sbjct: 390 IDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWE 449
Query: 545 SDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
N +GI W AWK + K GGLGF D+ FNDALL K W
Sbjct: 450 KASN-KRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAW 492
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 201 bits (512), Expect = 1e-49
Identities = 98/225 (43%), Positives = 142/225 (63%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E+ I A R+ G+K + P ++HLLFADDS+ FC+AN Q I++EIL Y
Sbjct: 432 TEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYE 491
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+SGQ++N+ KSSI F + + I ILG N YLGLP ++G SK + F +
Sbjct: 492 SVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSF 551
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
V +R+Q+++ W +FLS GKEV+IK+V +LP YV++CF+LP + K++ VA FWW
Sbjct: 552 VRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWW 611
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
S+G+ ++G+HW AW +C K GGLGF ++ FN ALL K LW
Sbjct: 612 SSNGD-SRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLW 655
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 199 bits (507), Expect = 5e-49
Identities = 91/225 (40%), Positives = 139/225 (61%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
++I ++LI + V + +G++ P +THL FADDS+ FC++N+ + ++ + Y
Sbjct: 1030 ADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYE 1089
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
SGQK+N KS I F QN + ILG + +YLGLP GR K++ F+Y
Sbjct: 1090 YYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNY 1149
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+IERV+ + SW ++LSPAGKE+++K+V S+PVY ++CFKLP+ + +I ++ NFWW
Sbjct: 1150 IIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWW 1209
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
+ + + I W AWK + K GGLGF D+ FNDALL K +W
Sbjct: 1210 EKNAKKRE-IPWIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVW 1253
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 199 bits (507), Expect = 5e-49
Identities = 91/225 (40%), Positives = 139/225 (61%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
++I ++LI + V + +G++ P +THL FADDS+ FC++N+ + ++ + Y
Sbjct: 1010 ADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYE 1069
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
SGQK+N KS I F QN + ILG + +YLGLP GR K++ F+Y
Sbjct: 1070 YYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNY 1129
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+IERV+ + SW ++LSPAGKE+++K+V S+PVY ++CFKLP+ + +I ++ NFWW
Sbjct: 1130 IIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWW 1189
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
+ + + I W AWK + K GGLGF D+ FNDALL K +W
Sbjct: 1190 EKNAKKRE-IPWIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVW 1233
>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 198 bits (504), Expect = 1e-48
Identities = 92/225 (40%), Positives = 142/225 (63%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
++ FS +I V++K G K S++GP+I+HL FAD S++F A+ + I++EILN Y
Sbjct: 652 ADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECAIIVEILNLYE 711
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+ SGQK+N++KS + FSK + + IL + +YLG+P GRS+ FD
Sbjct: 712 QASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSITGRSRTAIFDS 771
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+++R+ KL WK + LS AGKE+L+K+VI ++P Y++ +KLP + +KI +A FWW
Sbjct: 772 LMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQKIHSAMARFWW 831
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
S + + IHWK W +C K +GG+GF D+ +FNDALL + W
Sbjct: 832 GS-SDTQRRIHWKNWDSLCTLKCFGGMGFRDLRVFNDALLGRQAW 875
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 197 bits (502), Expect = 2e-48
Identities = 95/225 (42%), Positives = 142/225 (63%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E+ S L A R + G++ S NGP + HLLFADD++ F +++ N + EIL+ Y
Sbjct: 543 TEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYG 602
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
K SGQ +N+ KSS+ FS TP + + +IL + + +YLGLP GR K++ F
Sbjct: 603 KASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGA 662
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+I++++ K SW +RFLS AGK+V++KAV+ S+P+Y ++CFKLP LC+KI ++ FWW
Sbjct: 663 IIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWW 722
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
+ +V + W AW + PK+ GGLGF DI ND+LL K W
Sbjct: 723 DTKPDVRK-TSWVAWSKLTNPKNAGGLGFRDIERCNDSLLAKLGW 766
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 197 bits (500), Expect = 3e-48
Identities = 95/225 (42%), Positives = 141/225 (62%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E+ ++ SA +K GLK ++ P I+HLLFADDS+ +C+ N ++ I+ Y+
Sbjct: 648 TEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIEEYS 707
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
SGQ+VN+ KSSI+F K+ E + + + LG + YLGLP + SK T Y
Sbjct: 708 LASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVATLSY 767
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+ +R+ K+ W++ FLSP GKE+L+KAV +LP Y ++CFK+P +C++I ++A FWW
Sbjct: 768 LKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWW 827
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
K+ +G+HWKAW H+ PK GGLGF +I FN ALL K LW
Sbjct: 828 KNK-KEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLW 871
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 195 bits (495), Expect = 1e-47
Identities = 95/225 (42%), Positives = 138/225 (61%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E+ I A ++K G+K + P ++HLLFA+DS+ FC+AN Q +++ IL Y
Sbjct: 498 TEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGILKQYE 557
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+SGQ +N+ KSSI F ++ + I LG + YLGLP ++G SK F +
Sbjct: 558 AVSGQMINFSKSSIQFGHKVGDDIKAEIKSALGIHSIGGMGSYLGLPESLGGSKTRIFSF 617
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
V +R+QT++ W +FLS GKEV+IK+V+ LP YV++CF+LP + K++ VA FWW
Sbjct: 618 VRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVAKFWW 677
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
SDG ++G+HW AW +C K GGLGF + FN ALL K LW
Sbjct: 678 SSDGE-SRGMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLW 721
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 194 bits (492), Expect = 3e-47
Identities = 95/225 (42%), Positives = 137/225 (60%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E+ S +I A +G+K + P I+HL FADDS +F A + +I Y
Sbjct: 406 AEVLSRMIKQAETNGEIQGVKVCTDAPSISHLYFADDSFIFSRAEERDMLCMKDIFVTYE 465
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+SGQ++N+EKSS+ FS+N P Q+ + +LG +YLGLP + SK E F Y
Sbjct: 466 TMSGQQINYEKSSVSFSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRY 525
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+I+RV+ + W+++ LS GKEVL+KAVI S+P YV++CF+LP LC ++ Q++A FWW
Sbjct: 526 LIDRVRKRTQGWRDKTLSGVGKEVLLKAVIQSIPTYVMSCFELPRHLCNEMHQLMARFWW 585
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
G+ + IHW AW +C K GGLGF D+ +FN ALL K W
Sbjct: 586 GEFGD-ERKIHWIAWDKLCSSKKEGGLGFRDMHVFNKALLAKQGW 629
>gb|EMJ28511.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 193 bits (490), Expect = 5e-47
Identities = 93/225 (41%), Positives = 140/225 (62%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E + LIA R+ KG+ + P I+HL FADDS +F AN+ + +IL+ Y
Sbjct: 293 AEGLTALIAQKEREGFLKGVSICRGAPAISHLFFADDSFLFAWANMADCMALKDILDTYE 352
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+ GQ+VN++KS++ FSKN Q + Q +G S+YLGLP+ + + K +F++
Sbjct: 353 RALGQQVNFQKSAVCFSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMVLDKKKGASFNH 412
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+ ER+ KL +WK + LS AGKE+LIK V ++P+Y ++CF LP +C+ ++++VA FWW
Sbjct: 413 LKERLWKKLQTWKGKLLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWW 472
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
S N+ IHW AW +C PK+ GGLGF ++ FN ALL K W
Sbjct: 473 NS-STENKKIHWMAWDRLCAPKEEGGLGFRNLHAFNLALLAKQGW 516
>ref|XP_004298552.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 322
Score = 192 bits (489), Expect = 6e-47
Identities = 95/225 (42%), Positives = 138/225 (61%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E FS L+ A +K G+ ++ P +THL FADDS++FC+A++ + EI Y
Sbjct: 32 AEGFSALLKKAESEKLLHGVSIARGAPSVTHLFFADDSLLFCDASVQDCLKLKEIFAVYE 91
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
++SGQK++ EKS++ FS T + A L RYLGLP+ GR+KK+ F
Sbjct: 92 RVSGQKISVEKSTVSFSPRTTRVVKEACSTALDMKIVPCHERYLGLPIVTGRNKKKVFKG 151
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
V +RV K+ W+ + LS GKEVLIKAV S+P Y ++ F+LP G+CK+I++ +A +WW
Sbjct: 152 VADRVWQKIQGWEGKLLSKGGKEVLIKAVAQSIPTYTMSVFQLPAGICKEINKHLARYWW 211
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
+ G +GIHW+ W +CVPK GGLGF + FN AL+ K W
Sbjct: 212 GNFG--GKGIHWRRWDALCVPKGEGGLGFREFQCFNQALVGKIGW 254
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 192 bits (488), Expect = 8e-47
Identities = 90/225 (40%), Positives = 141/225 (62%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E FS L++ + G++ + P ++HLLFADDS++ C AN +A + IL Y
Sbjct: 904 AEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYE 963
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+ SGQ +N +KS++ FS NT + + A+ L + + RYLGLP+ +GRS+ + F Y
Sbjct: 964 ECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSY 1023
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+ ER+ ++ WK + LS AGKE+LIKAV ++P + + CF+L LC +IS+M+A +WW
Sbjct: 1024 LKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWW 1083
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
+ N+ +HW +W + +PK+ GGLGF DI +FN A+L K W
Sbjct: 1084 SNQEKDNK-MHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGW 1127
>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1184
Score = 192 bits (488), Expect = 8e-47
Identities = 92/225 (40%), Positives = 145/225 (64%)
Frame = +2
Query: 2 SEIFSNLIASAVRKKSFKGLKTSKNGPIITHLLFADDSIMFCEANIVQANIVMEILNNYN 181
+E S+++ A + G++ + P+I+HLLFADDS++ +A+ A+ + IL+ Y
Sbjct: 466 AEGLSSMLQGAENRGDLVGIRVCREAPMISHLLFADDSLILMQADKNNADHLKAILDIYC 525
Query: 182 KLSGQKVNWEKSSIFFSKNTPNEAQNAICQILGSINKHQSSRYLGLPLAIGRSKKETFDY 361
+ SGQK++ KSSIFFS+NT E + A+C L + + + +YLGLP IG K + F +
Sbjct: 526 QNSGQKISEAKSSIFFSRNTAVEDKAAVCGSLDIMTEALNDKYLGLPAMIGVDKSDCFRH 585
Query: 362 VIERVQTKLCSWKNRFLSPAGKEVLIKAVIDSLPVYVLACFKLPIGLCKKISQMVANFWW 541
+I+RV ++ K + LS GKEVLIK++ ++PV+ ++ F++P +C IS+ +A FWW
Sbjct: 586 LIDRVNNRINGRKEKMLSTGGKEVLIKSIAQAIPVFAMSVFRIPKKICDCISEAIARFWW 645
Query: 542 KSDGNVNQGIHWKAWKHICVPKDYGGLGFHDIVLFNDALLTKNLW 676
D N ++ IHWKAW +C+PK GGLGF D+ FN A+L K +W
Sbjct: 646 GDDEN-HRRIHWKAWWRMCIPKQRGGLGFRDLYCFNRAMLAKQIW 689