BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030760
         (710 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...   248   1e-63
gb|EMJ17509.1| hypothetical protein PRUPE_ppa019701mg [Prunus pe...   247   3e-63
gb|EOX92974.1| DNA repair and recombination protein pif1, putati...   241   2e-61
ref|XP_004306279.1| PREDICTED: DNA repair and recombination prot...   233   6e-59
ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-l...   218   2e-54
ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Popu...   218   2e-54
ref|XP_002303396.1| predicted protein [Populus trichocarpa]           218   2e-54
ref|XP_002520397.1| conserved hypothetical protein [Ricinus comm...   214   2e-53
ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Sela...   164   2e-38
ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Sela...   164   2e-38
emb|CBJ33858.1| conserved unknown protein [Ectocarpus siliculosus]    149   9e-34
ref|XP_004351690.1| DNA helicase, putative [Acanthamoeba castell...   146   6e-33
emb|CBJ26927.1| conserved unknown protein [Ectocarpus siliculosus]    141   2e-31
ref|XP_004348568.1| Rrm3p helicase [Acanthamoeba castellanii str...   139   1e-30
ref|XP_004343985.1| zinc knuckle domain containing protein [Acan...   136   8e-30
ref|XP_647539.1| hypothetical protein DDB_G0268430 [Dictyosteliu...   132   1e-28
ref|YP_007593997.1| helicase [Bifidobacterium thermophilum RBL67...   127   3e-27
ref|XP_004359275.1| hypothetical protein DFA_01309 [Dictyosteliu...   126   8e-27
ref|WP_003669103.1| DNA helicase [Moraxella catarrhalis] gi|3265...   125   1e-26
ref|WP_003671549.1| DNA helicase [Moraxella catarrhalis] gi|3265...   125   1e-26

>ref|XP_004243235.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Solanum
           lycopersicum]
          Length = 498

 Score =  248 bits (634), Expect = 1e-63
 Identities = 124/228 (54%), Positives = 167/228 (73%), Gaps = 4/228 (1%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICV 181
           PD SAV+LYPRI DV++VN E++  L++ ++ Y+A D G   W +QLK+GIAP+ L++CV
Sbjct: 269 PDSSAVQLYPRIEDVSRVNAERLDCLDEVLFNYQALDSGKDPWKKQLKNGIAPELLKLCV 328

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQ----YGMSDMCDHGDVLPLVKFDSGX 349
           G+RV+L KNI+    LVNGATGT+++   V        + +SD+C +G++LP+V+FDSG 
Sbjct: 329 GSRVLLTKNIDVVGGLVNGATGTILDFAAVQDTHKLYDHEISDICGNGNLLPVVRFDSGQ 388

Query: 350 XXXXXXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYV 529
                      M+GD+ VA R+QIPLIL+WALSIHKCQGMTL+ LHTDL RVF FGMVYV
Sbjct: 389 ELMIGVERWYVMEGDEAVAMRKQIPLILAWALSIHKCQGMTLNNLHTDLYRVFGFGMVYV 448

Query: 530 ALSRVRSLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKKKALIAD 673
           ALSRV+SL GL L    PSKIKA+PKVL+FY   ++E+DE+K+  + D
Sbjct: 449 ALSRVKSLDGLNLVNFNPSKIKANPKVLQFYERLSAEKDEQKEDSVTD 496


>gb|EMJ17509.1| hypothetical protein PRUPE_ppa019701mg [Prunus persica]
          Length = 549

 Score =  247 bits (630), Expect = 3e-63
 Identities = 131/238 (55%), Positives = 167/238 (70%), Gaps = 2/238 (0%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICV 181
           PDP+ V+LYPR  DVN+VN  ++ SL  E+ VY A D G+    RQL+ GIAP E+ +C 
Sbjct: 271 PDPTVVQLYPRNEDVNRVNSSRLASLGNELVVYTAVDSGEDSLKRQLEQGIAPKEIALCE 330

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXX 361
            ARVML+KN+N WR LVNGATGTV    +      G++ +CD G +LP+V+FDSG     
Sbjct: 331 DARVMLVKNLNTWRGLVNGATGTVTGFYE--SEDVGVTRICDDG-LLPVVRFDSGLEMTI 387

Query: 362 XXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSR 541
                   +GD V A+R Q+PLIL+WA SIHKCQGMTLD+LHTDLSR F+ GMVYVALSR
Sbjct: 388 EPNTWTANEGDSV-AKREQLPLILAWASSIHKCQGMTLDRLHTDLSRAFENGMVYVALSR 446

Query: 542 VRSLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKKK--ALIADRNESSSSGQTIT 709
           VRSL GLYLSG +PSKIK HPKV +FY+ F SEQD++++  A +   + +SS   +IT
Sbjct: 447 VRSLEGLYLSGFDPSKIKVHPKVAQFYNKFTSEQDKEEEINAPVGRNSTNSSCENSIT 504


>gb|EOX92974.1| DNA repair and recombination protein pif1, putative [Theobroma
           cacao]
          Length = 475

 Score =  241 bits (615), Expect = 2e-61
 Identities = 126/207 (60%), Positives = 148/207 (71%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICV 181
           P PSAVRLYPRI DVNKVN EKMK+L +E  +Y+A D G K W RQL  G+APD+L +C 
Sbjct: 270 PHPSAVRLYPRIDDVNKVNEEKMKALSEEQVIYEAIDRGKKPWKRQLALGLAPDKLVLCK 329

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXX 361
           GARVMLIKN+N   +LVNGATG V    +         D     ++LP+VKFDSG     
Sbjct: 330 GARVMLIKNLNVMHRLVNGATGIVTGFTETKGGTVLSPD-----NLLPVVKFDSGPEMVI 384

Query: 362 XXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSR 541
                  M G + VA R Q+PL+L+WALSIHKCQGM+LD++HTDLSR F +GMVYVALSR
Sbjct: 385 EPQKWYVMVGSRPVAWRLQLPLVLAWALSIHKCQGMSLDRIHTDLSRAFGYGMVYVALSR 444

Query: 542 VRSLGGLYLSGLEPSKIKAHPKVLEFY 622
           VRSL GL+LSG  PSKIKAHPKVLEFY
Sbjct: 445 VRSLDGLHLSGFSPSKIKAHPKVLEFY 471


>ref|XP_004306279.1| PREDICTED: DNA repair and recombination protein pif1,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 515

 Score =  233 bits (593), Expect = 6e-59
 Identities = 127/233 (54%), Positives = 155/233 (66%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICV 181
           PDPS V+LYPRI DVN+VN  ++ SL  E  +Y A D G++    QL+ GIAP E+ +C 
Sbjct: 270 PDPSVVQLYPRIEDVNRVNASRLVSLGNEFVIYTAIDSGEESRKSQLEQGIAPKEVTLCK 329

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXX 361
            ARVML+KN+N WR LVNGATGTV     V KN+    D+      LP+VKFDSG     
Sbjct: 330 DARVMLVKNLNTWRGLVNGATGTVQGFY-VPKNK----DIAGVCHALPIVKFDSGPEMLI 384

Query: 362 XXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSR 541
                   +GDKVVA R+Q+PLIL+WA SIHKCQGMTLD LHTDLS+ F+ GMVYVALSR
Sbjct: 385 EPETWAVTEGDKVVAERKQVPLILAWASSIHKCQGMTLDCLHTDLSKAFENGMVYVALSR 444

Query: 542 VRSLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKKKALIADRNESSSSGQ 700
           VRSL GLYLSG    KI  HPKVL FY SF+ E  ++      + +++ S GQ
Sbjct: 445 VRSLEGLYLSGFNRWKIMVHPKVLLFYKSFSGEVAQE------ENDDNDSQGQ 491


>ref|XP_006586570.1| PREDICTED: ATP-dependent DNA helicase PIF1-like [Glycine max]
          Length = 516

 Score =  218 bits (554), Expect = 2e-54
 Identities = 116/224 (51%), Positives = 150/224 (66%)
 Frame = +2

Query: 5   DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICVG 184
           DPS V+L+P   DV +VN E+++SL+K+V VY+A D G   W   L+ GI PDE+ +C G
Sbjct: 280 DPSIVQLFPLNKDVERVNDERLRSLQKDVVVYRAVDSGKGHWKGNLRYGIVPDEISLCEG 339

Query: 185 ARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXX 364
           ARVML+KN++    LVNGATG V+        +  +S +C+   VLP+VKFD G      
Sbjct: 340 ARVMLVKNLDTEHGLVNGATGVVVGFSWSLGEEEHLSGICND-KVLPVVKFDGGKFLTIK 398

Query: 365 XXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRV 544
                 MDG +VVA R+QIPLIL+WA+SIHKCQGMTL+++HTDLSR F  GMVYVALSRV
Sbjct: 399 PAKWHLMDGPEVVACRKQIPLILAWAMSIHKCQGMTLERVHTDLSRAFGCGMVYVALSRV 458

Query: 545 RSLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKKKALIADR 676
           RSL GL+LS    SKIK   +V  FY S  SE  + K+ ++ DR
Sbjct: 459 RSLEGLHLSAFNRSKIKVDQRVSRFYRSLASE--KSKEVMVVDR 500


>ref|XP_006380622.1| hypothetical protein POPTR_0007s09900g [Populus trichocarpa]
           gi|550334512|gb|ERP58419.1| hypothetical protein
           POPTR_0007s09900g [Populus trichocarpa]
          Length = 540

 Score =  218 bits (554), Expect = 2e-54
 Identities = 122/211 (57%), Positives = 136/211 (64%)
 Frame = +2

Query: 5   DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICVG 184
           D   V LYPRI DV KVN E+MKSL +    Y A D G +   +QL  GI PD+L +CVG
Sbjct: 319 DSLVVWLYPRINDVEKVNEERMKSLGESTVTYAAADSGLEHRKKQLNQGIVPDQLVLCVG 378

Query: 185 ARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXX 364
           ARVMLI N+N  R L NGATGTV     V       SD+     + P VKFD G      
Sbjct: 379 ARVMLIMNLNIERNLCNGATGTVTGFVPVEDKNARKSDI-----LFPQVKFDRGPEILIE 433

Query: 365 XXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRV 544
                  +GD VVA R QIPLIL+WA+SIHKCQGMTLD   TDLSR F +GMVYVALSRV
Sbjct: 434 PQKFEIFEGDIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRV 493

Query: 545 RSLGGLYLSGLEPSKIKAHPKVLEFYHSFNS 637
           RSL GL+LSG  PSKIKAHPKVL FY SF S
Sbjct: 494 RSLEGLHLSGFTPSKIKAHPKVLLFYKSFTS 524


>ref|XP_002303396.1| predicted protein [Populus trichocarpa]
          Length = 493

 Score =  218 bits (554), Expect = 2e-54
 Identities = 122/211 (57%), Positives = 136/211 (64%)
 Frame = +2

Query: 5   DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICVG 184
           D   V LYPRI DV KVN E+MKSL +    Y A D G +   +QL  GI PD+L +CVG
Sbjct: 272 DSLVVWLYPRINDVEKVNEERMKSLGESTVTYAAADSGLEHRKKQLNQGIVPDQLVLCVG 331

Query: 185 ARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXX 364
           ARVMLI N+N  R L NGATGTV     V       SD+     + P VKFD G      
Sbjct: 332 ARVMLIMNLNIERNLCNGATGTVTGFVPVEDKNARKSDI-----LFPQVKFDRGPEILIE 386

Query: 365 XXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRV 544
                  +GD VVA R QIPLIL+WA+SIHKCQGMTLD   TDLSR F +GMVYVALSRV
Sbjct: 387 PQKFEIFEGDIVVAWRYQIPLILAWAISIHKCQGMTLDHAQTDLSRAFGYGMVYVALSRV 446

Query: 545 RSLGGLYLSGLEPSKIKAHPKVLEFYHSFNS 637
           RSL GL+LSG  PSKIKAHPKVL FY SF S
Sbjct: 447 RSLEGLHLSGFTPSKIKAHPKVLLFYKSFTS 477


>ref|XP_002520397.1| conserved hypothetical protein [Ricinus communis]
           gi|223540444|gb|EEF42013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 512

 Score =  214 bits (545), Expect = 2e-53
 Identities = 117/216 (54%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICV 181
           PDPSAVRLYPRI DVNKVN +++KSL +++  YKA D G ++ +  LK G+A D+LEIC 
Sbjct: 256 PDPSAVRLYPRIEDVNKVNEKRLKSLGEKIVAYKAVDGGTRKEL--LKQGMAQDQLEICK 313

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCD--HGDVLPLVKFDSGXXX 355
           GARVMLIKN++ W KL NGATGTV+   +         D+ D    ++LP++KFDSG   
Sbjct: 314 GARVMLIKNLHVWSKLCNGATGTVIGFVEP------YDDVIDLFPDNLLPVIKFDSGKVT 367

Query: 356 XXXXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVAL 535
                     +GD  VA R Q+PL L++ALSIHKCQGMT+D L+TDLSR F +GMVY  L
Sbjct: 368 VIKPQKWECYEGDDFVAWRSQLPLRLAYALSIHKCQGMTIDCLYTDLSRSFIYGMVYAVL 427

Query: 536 SRVRSLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQ 643
           SR R++ G+ LSG EPS IKA+PKVL FY   +S+Q
Sbjct: 428 SRGRTMKGIQLSGFEPSMIKANPKVLHFYDQLSSKQ 463


>ref|XP_002975258.1| hypothetical protein SELMODRAFT_451567 [Selaginella moellendorffii]
           gi|300156832|gb|EFJ23459.1| hypothetical protein
           SELMODRAFT_451567 [Selaginella moellendorffii]
          Length = 580

 Score =  164 bits (416), Expect = 2e-38
 Identities = 96/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLE--KEVYVYKAQDLGDKQWMRQLKSGIAPDELEI 175
           P     RLYPR ADV++ N +K++SL    +   + A+D G  Q    L    A  E+ +
Sbjct: 371 PGIEPTRLYPRRADVDRENEQKLRSLNPSSKSVTFSAKDSGRTQ---MLNGSRAEAEITL 427

Query: 176 CVGARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFD--SGX 349
            +GA+VMLIKN+   + LVNGA G V+      K++  +S     G  LP+V+F+     
Sbjct: 428 AIGAQVMLIKNLGTEQGLVNGARGIVVGFTAPEKSELRISP----GGGLPVVRFNHSGSS 483

Query: 350 XXXXXXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYV 529
                      M+G+  VA+R Q+PLIL+WALS+HKCQGMTLD + TDLSR F++GMVYV
Sbjct: 484 EWIIRPEAWSVMEGEVEVAKRLQLPLILAWALSVHKCQGMTLDCVETDLSRTFEYGMVYV 543

Query: 530 ALSRVRSLGGLYLSGLEPSKIKAHPKVLEFY 622
           ALSRVRSL GL L G +P KI+ HP+V+ FY
Sbjct: 544 ALSRVRSLHGLRLLGFDPLKIRVHPEVVTFY 574


>ref|XP_002987435.1| hypothetical protein SELMODRAFT_451566 [Selaginella moellendorffii]
           gi|300144841|gb|EFJ11522.1| hypothetical protein
           SELMODRAFT_451566 [Selaginella moellendorffii]
          Length = 580

 Score =  164 bits (416), Expect = 2e-38
 Identities = 96/211 (45%), Positives = 130/211 (61%), Gaps = 4/211 (1%)
 Frame = +2

Query: 2   PDPSAVRLYPRIADVNKVNVEKMKSLE--KEVYVYKAQDLGDKQWMRQLKSGIAPDELEI 175
           P     RLYPR ADV++ N +K++SL    +   + A+D G  Q    L    A  E+ +
Sbjct: 371 PGIEPTRLYPRRADVDRENEQKLRSLNPSSKSVTFSAKDSGRTQ---MLNGSRAEAEITL 427

Query: 176 CVGARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFD--SGX 349
            +GA+VMLIKN+   + LVNGA G V+      K++  +S     G  LP+V+F+     
Sbjct: 428 AIGAQVMLIKNLGTEQGLVNGARGIVVGFTAPEKSELRISP----GGGLPVVRFNHSGSS 483

Query: 350 XXXXXXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYV 529
                      M+G+  VA+R Q+PLIL+WALS+HKCQGMTLD + TDLSR F++GMVYV
Sbjct: 484 EWIIRPEAWSVMEGEVEVAKRLQLPLILAWALSVHKCQGMTLDCVETDLSRTFEYGMVYV 543

Query: 530 ALSRVRSLGGLYLSGLEPSKIKAHPKVLEFY 622
           ALSRVRSL GL L G +P KI+ HP+V+ FY
Sbjct: 544 ALSRVRSLHGLRLLGFDPLKIRVHPEVVTFY 574


>emb|CBJ33858.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 435

 Score =  149 bits (376), Expect = 9e-34
 Identities = 90/207 (43%), Positives = 125/207 (60%), Gaps = 3/207 (1%)
 Frame = +2

Query: 38  ADVNKVNVEKMKSLEKEVYVYKAQDLGDK-QWMRQLKSGI-APDELEICVGARVMLIKNI 211
           ADV KVN E++  L+    V KA++ G++   +RQL     AP  L + VGA+VML+KN+
Sbjct: 231 ADVLKVNEERLGRLDGAEVVSKAENRGNRPDILRQLDDSCSAPATLRLKVGAQVMLVKNL 290

Query: 212 NPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXXXXXXXXMDG 391
              R L NG+ G V+   K + +          G  LP+V+F SG              G
Sbjct: 291 ATGRGLANGSRGVVVRFAKSTSS----------GARLPVVRFASGLEEVIRPEEFHLYVG 340

Query: 392 DKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGLYLS 571
            + VA RRQ+PL L+WALS+HK QGM+LD+    LSR F++G  YVALSRVRSL GL + 
Sbjct: 341 GQAVASRRQLPLALAWALSVHKSQGMSLDRASVCLSRAFEYGQAYVALSRVRSLEGLSVV 400

Query: 572 G-LEPSKIKAHPKVLEFYHSFNSEQDE 649
           G ++PSKI+AHP+V+ FY + + E+ E
Sbjct: 401 GTIDPSKIRAHPRVVSFYRALSRERKE 427


>ref|XP_004351690.1| DNA helicase, putative [Acanthamoeba castellanii str. Neff]
            gi|440801909|gb|ELR22913.1| DNA helicase, putative
            [Acanthamoeba castellanii str. Neff]
          Length = 1009

 Score =  146 bits (369), Expect = 6e-33
 Identities = 91/234 (38%), Positives = 130/234 (55%), Gaps = 2/234 (0%)
 Frame = +2

Query: 14   AVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGI-APDELEICVGAR 190
            A RLY    DV+  NV+ ++ +  E + + A+D G   +++QL+    AP ELE+ VGA+
Sbjct: 487  ATRLYSHRRDVDAENVKCLQDINTESHTFYAEDEGTNPYLKQLQQNCPAPYELELKVGAQ 546

Query: 191  VMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMS-DMCDHGDVLPLVKFDSGXXXXXXX 367
            V+L+KN++   +LVNGA G V+E  K  +++     D        P V F +G       
Sbjct: 547  VILLKNLDFENELVNGARGLVVEFRKPDRSEREKERDKAFAKQEYPDVLFANGHRRILTP 606

Query: 368  XXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVR 547
                   G  V A R+Q+PL L+WALSIHK QGMT+ K+   L  VF++G  YVALSR  
Sbjct: 607  EQFSVEVGGSVKASRKQVPLGLAWALSIHKSQGMTISKVELHLGNVFEYGQAYVALSRAT 666

Query: 548  SLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKKKALIADRNESSSSGQTIT 709
            SL GL L    P+ IKAHP+VL+FY S         + L AD++   ++  T T
Sbjct: 667  SLEGLRLLSFNPAGIKAHPRVLQFYQSLLG------RPLFADQSSQRTTISTTT 714


>emb|CBJ26927.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 823

 Score =  141 bits (356), Expect = 2e-31
 Identities = 82/213 (38%), Positives = 124/213 (58%), Gaps = 6/213 (2%)
 Frame = +2

Query: 2    PDPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDE-LEIC 178
            P PS  RL+ R  DV+++NVE+++ L+     Y+A+D GD+ ++ QL+   A  + +E+ 
Sbjct: 455  PPPSYTRLFSRNEDVDRLNVEELQKLQGRAEFYEAEDNGDQMYLTQLQKHCAAGQTIELK 514

Query: 179  VGARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXX 358
            VGA+V+L+KN++   +LVNGATG V E  + S            G  LP+V+FD+     
Sbjct: 515  VGAKVLLLKNLDSSSQLVNGATGVVKEFVEAS------------GRRLPMVEFDTIEGGG 562

Query: 359  XXXXXXXXMD-----GDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMV 523
                     +     GD+ +ARR Q+PL L+WALS+HK QGMT+  +      +F+FG  
Sbjct: 563  KVVSVISEEEWTVSLGDREMARRVQLPLRLAWALSVHKSQGMTIAHVMVSTRGMFEFGQA 622

Query: 524  YVALSRVRSLGGLYLSGLEPSKIKAHPKVLEFY 622
            YVALSR  +L GL+L   +   +KAH  V +FY
Sbjct: 623  YVALSRATTLDGLHLVEFQKGVVKAHESVKKFY 655


>ref|XP_004348568.1| Rrm3p helicase [Acanthamoeba castellanii str. Neff]
            gi|440801085|gb|ELR22110.1| Rrm3p helicase [Acanthamoeba
            castellanii str. Neff]
          Length = 805

 Score =  139 bits (349), Expect = 1e-30
 Identities = 91/242 (37%), Positives = 126/242 (52%), Gaps = 12/242 (4%)
 Frame = +2

Query: 5    DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGI-APDELEICV 181
            D    +L+P   +V   N E + +L  + Y ++A D G + ++ +L+    AP+ LE+ V
Sbjct: 516  DIPPTQLFPTRREVAHRNHECLAALPGKSYFFRAVDEGKEPFLGKLQKYCPAPETLELKV 575

Query: 182  GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDV-----------LPL 328
            GA+V+L+ N+     LVNGA G V      S            G              P+
Sbjct: 576  GAQVILLMNLAFSGGLVNGARGVVTGFASDSSEVTVAGRTSSSGKAKRKKVVLDATYYPV 635

Query: 329  VKFDSGXXXXXXXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVF 508
            V+F +G              G K VA R QIPL L+WALSIHK QGMTL K+  +LS VF
Sbjct: 636  VRFTTGLERIILPEEWKSEVGPKKVASRTQIPLNLAWALSIHKSQGMTLSKVEMNLSHVF 695

Query: 509  DFGMVYVALSRVRSLGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKKKALIADRNESS 688
             +G  YVALSR ++L GLYL G E  K++AHP+VLE+Y  F+S    ++      R  SS
Sbjct: 696  AYGQAYVALSRAQNLEGLYLMGFEAGKVRAHPRVLEYYRRFSSSVALRRTGPSQPRPSSS 755

Query: 689  SS 694
            SS
Sbjct: 756  SS 757


>ref|XP_004343985.1| zinc knuckle domain containing protein [Acanthamoeba castellanii str.
            Neff] gi|440799538|gb|ELR20582.1| zinc knuckle domain
            containing protein [Acanthamoeba castellanii str. Neff]
          Length = 668

 Score =  136 bits (342), Expect = 8e-30
 Identities = 83/215 (38%), Positives = 119/215 (55%), Gaps = 1/215 (0%)
 Frame = +2

Query: 14   AVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQL-KSGIAPDELEICVGAR 190
            A  LYP   DV+  N +++  L     VY+A D G + +   L ++  APD LE+ + A+
Sbjct: 449  ATLLYPHRRDVDGENTKRLAELAGTSRVYRAVDSGVEPYRSMLARNCSAPDVLELKLNAQ 508

Query: 191  VMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXXXX 370
            V+L+KN++   +LVNGA G V++  K  K Q    +  D     P V F SG        
Sbjct: 509  VILLKNLDSALELVNGARGVVVDFKKPVK-QDNKEESYDESKEYPEVLFTSGVRRLITPE 567

Query: 371  XXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRS 550
                    +  A R Q PL L+WALSIHK QGM++ K+  DL +V+++G  YVALSR  S
Sbjct: 568  EWNIGVAGEPQAWRVQCPLALAWALSIHKAQGMSISKVQMDLGKVWEYGQGYVALSRATS 627

Query: 551  LGGLYLSGLEPSKIKAHPKVLEFYHSFNSEQDEKK 655
            L GLY+  L    I AHPKVL+FY    ++Q +++
Sbjct: 628  LDGLYIMDLNEKGITAHPKVLQFYADMEAQQQQER 662


>ref|XP_647539.1| hypothetical protein DDB_G0268430 [Dictyostelium discoideum AX4]
            gi|60475733|gb|EAL73668.1| hypothetical protein
            DDB_G0268430 [Dictyostelium discoideum AX4]
          Length = 933

 Score =  132 bits (331), Expect = 1e-28
 Identities = 81/202 (40%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
 Frame = +2

Query: 23   LYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICVGARVMLI 202
            LYP    VN  N  ++  L  E  +YKA D     +   LK+  AP+ L + +GA+V+LI
Sbjct: 736  LYPHRDKVNNENEHRLSILNTEARIYKANDNFQPNYADSLKNCPAPETLTLKIGAQVILI 795

Query: 203  KNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXXXXXXXX 382
            KN++   +LVNG+ G V++    S +           + LP+VKF +G            
Sbjct: 796  KNLDMENELVNGSRGVVIDWTDSSLSP-------SKEESLPIVKFTNGLTRIIGREVWRN 848

Query: 383  MDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGL 562
              G+ V++ RRQIPL+L+WALSIHK QGMT+DKL  +L  +F+ G  YVALSR   L GL
Sbjct: 849  EFGEIVISSRRQIPLMLAWALSIHKSQGMTIDKLVINLDGIFENGQTYVALSRSSGLNGL 908

Query: 563  YL-SGLEPSKIKAHPKVLEFYH 625
             L S  + S IK    V  FYH
Sbjct: 909  QLVSKFKKSHIKVDENVKTFYH 930


>ref|YP_007593997.1| helicase [Bifidobacterium thermophilum RBL67]
           gi|505263712|ref|WP_015450814.1| helicase
           [Bifidobacterium thermophilum]
           gi|469499031|gb|AGH41557.1| helicase [Bifidobacterium
           thermophilum RBL67]
          Length = 469

 Score =  127 bits (320), Expect = 3e-27
 Identities = 77/204 (37%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
 Frame = +2

Query: 5   DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSG-IAPDELEICV 181
           D  AV L+P     +++N  K+  ++   +VY+AQ  G    +++LKS  +AP+ L + V
Sbjct: 235 DDVAVYLFPNNRQTDELNDRKLAQIDSREHVYEAQASGPVHLIKRLKSTMLAPELLTLKV 294

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXX 361
           GA VM ++N +  ++ VNG+ GTV++   V+            GD  P+V+FD+G     
Sbjct: 295 GAAVMALRN-DTNQQYVNGSLGTVVDF--VANRD---------GDEYPMVRFDNGHIVVM 342

Query: 362 XXXXXXXMDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSR 541
                  MDG+ V+A  +Q+PL  +WA++IHK QGMTLD+   DL R F  GM YVALSR
Sbjct: 343 QPAAWEMMDGETVLASVKQVPLRCAWAITIHKSQGMTLDRARMDLRRTFAPGMGYVALSR 402

Query: 542 VRSLGGLYLSGLEPSKIKAHPKVL 613
           V S+ GLYL G+        P+ +
Sbjct: 403 VESMDGLYLDGINDRAFLVSPQAV 426


>ref|XP_004359275.1| hypothetical protein DFA_01309 [Dictyostelium fasciculatum]
            gi|328873058|gb|EGG21425.1| hypothetical protein
            DFA_01309 [Dictyostelium fasciculatum]
          Length = 1554

 Score =  126 bits (316), Expect = 8e-27
 Identities = 83/230 (36%), Positives = 118/230 (51%), Gaps = 1/230 (0%)
 Frame = +2

Query: 23   LYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGIAPDELEICVGARVMLI 202
            LYP+   V+K N +K+  L  E   + A D+G   + +   +  AP  L + +G++V+L+
Sbjct: 525  LYPKRIQVDKENQQKLDQLTTEGMTFTAVDVGSDNYRKTFDNMQAPQSLTLKIGSQVILL 584

Query: 203  KNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXXXXXXXXX 382
            KN++  + LVNGA G V+          G SD      V P+V+F SG            
Sbjct: 585  KNLDFEQGLVNGARGVVI----------GFSDS---DIVQPVVRFASGAEVVVGIEIWKI 631

Query: 383  MDGDKVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALSRVRSLGGL 562
              G   VA RRQ+PL L+WAL+IHK QGMT+D+L  DL   F  G  YVALSR  SL GL
Sbjct: 632  EIGSLTVASRRQLPLALAWALTIHKSQGMTIDRLIVDLDGTFQNGQAYVALSRATSLEGL 691

Query: 563  YL-SGLEPSKIKAHPKVLEFYHSFNSEQDEKKKALIADRNESSSSGQTIT 709
             L +  +P   K    V++FY    S  ++       D N  +++ Q IT
Sbjct: 692  QLKTPAKPKHFKVDQGVVKFYQKIESISNQ-------DNNNQNNNNQQIT 734


>ref|WP_003669103.1| DNA helicase [Moraxella catarrhalis] gi|326571377|gb|EGE21392.1|
           putative DNA helicase/AAA ATPase [Moraxella catarrhalis
           BC7]
          Length = 618

 Score =  125 bits (315), Expect = 1e-26
 Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 2/192 (1%)
 Frame = +2

Query: 5   DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGI-APDELEICV 181
           D +  RLY   ADV+ +N  ++  L  +   Y+A  +G+K     L   + APDEL + +
Sbjct: 221 DLNRTRLYTHNADVDVINQTQLNELTAKTITYRAAKMGEKPLQESLSKSVRAPDELTVAI 280

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXX 361
           GA+VM +KN+ P   + NG  G V+    VS   Y  +D        PLV+ ++G     
Sbjct: 281 GAKVMFVKNL-PLLGVYNGTMGEVVGFIGVSGKAYKATDADISETAYPLVRLNTGGEVAA 339

Query: 362 XXXXXXXMDGD-KVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALS 538
                   D D  V+A   Q+PL L+WA+++HK QGMTLD    DLS+ F+ G  YVALS
Sbjct: 340 EPEEWTVEDKDGTVLASYTQVPLCLAWAITVHKSQGMTLDAAEIDLSKTFEMGQGYVALS 399

Query: 539 RVRSLGGLYLSG 574
           R+RSL GL L G
Sbjct: 400 RLRSLDGLKLLG 411


>ref|WP_003671549.1| DNA helicase [Moraxella catarrhalis] gi|326569425|gb|EGE19485.1|
           putative DNA helicase/AAA ATPase [Moraxella catarrhalis
           BC8]
          Length = 618

 Score =  125 bits (315), Expect = 1e-26
 Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 2/192 (1%)
 Frame = +2

Query: 5   DPSAVRLYPRIADVNKVNVEKMKSLEKEVYVYKAQDLGDKQWMRQLKSGI-APDELEICV 181
           D +  RLY   ADV+ +N  ++  L  +   Y+A  +G+K     L   + APDEL + +
Sbjct: 221 DLNRTRLYTHNADVDVINQTQLNELTAKTITYRAAKMGEKPLQESLSKSVRAPDELTVAI 280

Query: 182 GARVMLIKNINPWRKLVNGATGTVMELCKVSKNQYGMSDMCDHGDVLPLVKFDSGXXXXX 361
           GA+VM +KN+ P   + NG  G V+    VS   Y  +D        PLV+ ++G     
Sbjct: 281 GAKVMFVKNL-PLLGVYNGTMGEVVGFIGVSGKAYKATDADISETAYPLVRLNTGGEVAA 339

Query: 362 XXXXXXXMDGD-KVVARRRQIPLILSWALSIHKCQGMTLDKLHTDLSRVFDFGMVYVALS 538
                   D D  V+A   Q+PL L+WA+++HK QGMTLD    DLS+ F+ G  YVALS
Sbjct: 340 EPEEWTVEDKDGTVLASYTQVPLCLAWAITVHKSQGMTLDAAEIDLSKTFEMGQGYVALS 399

Query: 539 RVRSLGGLYLSG 574
           R+RSL GL L G
Sbjct: 400 RLRSLDGLKLLG 411