BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia26_contig00030672
         (337 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]       101   1e-19
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor...    98   1e-18
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl...    97   3e-18
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    91   2e-16
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...    91   2e-16
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...    89   5e-16
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...    88   1e-15
gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus...    85   1e-14
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...    85   1e-14
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...    85   1e-14
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...    84   1e-14
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl...    84   2e-14
gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus...    83   4e-14
gb|AFK43257.1| unknown [Lotus japonicus]                               83   4e-14
gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]            82   6e-14
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ...    82   1e-13
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]    82   1e-13
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...    81   2e-13
ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chlor...    78   1e-12
ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Caps...    78   1e-12

>gb|EPS74339.1| hypothetical protein M569_00411 [Genlisea aurea]
          Length = 1063

 Score =  101 bits (251), Expect = 1e-19
 Identities = 58/108 (53%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
 Frame = -3

Query: 335 QSLSWHSVKPLSV-SLRNPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVK 159
           Q   W S KP  V S RN  L K ++ A   S S+  A  DSD      SG+    S ++
Sbjct: 6   QGRCWRSAKPRRVISRRNLCLLKFVTVACPRSNSLQNATSDSDSDDCAFSGQSAGHSRLR 65

Query: 158 IEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINK 15
           IEE V L+S+K+RLDSW+SSRI GISRARVQSSIRSG VSVNG ++NK
Sbjct: 66  IEEAVCLESEKVRLDSWISSRIGGISRARVQSSIRSGFVSVNGSVVNK 113


>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
           lycopersicum]
          Length = 436

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
 Frame = -3

Query: 284 PSLQKLISTARAYSTSISA-----ANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLR 120
           P   K IS +R  S    A      + DSDD  + + GR +N+SGVK+EETV+  + KLR
Sbjct: 13  PQNPKPISLSRVSSFICRAFTKFPGDSDSDDSPDEIPGRRSNYSGVKLEETVDSKTGKLR 72

Query: 119 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEH 6
           LDSW+SSRI+G+SRARVQSSIRSGLVSVNG + +K  H
Sbjct: 73  LDSWVSSRIDGVSRARVQSSIRSGLVSVNGRVTDKVSH 110


>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Solanum tuberosum]
          Length = 431

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 47/71 (66%), Positives = 59/71 (83%)
 Frame = -3

Query: 218 DSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVS 39
           DSDD  + + GR +N+SGVK+EETV+  + KLRLDSW+SSRI+G+SRARVQSSIRSGLVS
Sbjct: 40  DSDDSPDEIPGRRSNYSGVKLEETVDGKTGKLRLDSWVSSRIDGVSRARVQSSIRSGLVS 99

Query: 38  VNGHIINKKEH 6
           VNG + +K  H
Sbjct: 100 VNGRVTDKVSH 110


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/95 (48%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
 Frame = -3

Query: 284 PSLQKLISTARAYSTSISA-ANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSW 108
           P+ +++ S     S++ S   + D D++    S R  N++G ++EETV+++  K+RLDSW
Sbjct: 23  PNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSW 82

Query: 107 LSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
           +S RINGISRARVQSSIR+GLVSVNG +I+K  H+
Sbjct: 83  ISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHN 117


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/95 (48%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
 Frame = -3

Query: 284 PSLQKLISTARAYSTSISA-ANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSW 108
           P+ +++ S     S++ S   + D D++    S R  N++G ++EETV+++  K+RLDSW
Sbjct: 23  PNRRRIGSNVLRISSNFSTRCSSDYDEYSEAQSERIANYAGTRLEETVDVNPGKVRLDSW 82

Query: 107 LSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
           +S RINGISRARVQSSIR+GLVSVNG +I+K  H+
Sbjct: 83  ISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHN 117


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 49/86 (56%), Positives = 64/86 (74%)
 Frame = -3

Query: 260 TARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSWLSSRINGIS 81
           TA    T  S++  + +  QNP  G+  N+SGVK+EE+V+  S K RLDSW+SSRI+GIS
Sbjct: 51  TASRLLTVHSSSTREPNSNQNP--GQRINYSGVKLEESVDSKSGKSRLDSWISSRISGIS 108

Query: 80  RARVQSSIRSGLVSVNGHIINKKEHS 3
           RARVQSSI+SGLVSVNG +I+K  H+
Sbjct: 109 RARVQSSIKSGLVSVNGKVIDKVSHN 134


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 60/117 (51%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
 Frame = -3

Query: 332 SLSWHSVKPLSVSL----RNP-SLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFS 168
           S S+ S+   S S     RNP S  ++    RA S S       +D+    VSGR  N++
Sbjct: 7   SASFFSISHTSQSALLFPRNPKSCSRVFRILRACSNS-------TDEPLVSVSGRRTNYA 59

Query: 167 GVKIEETV---ELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEH 6
           GV++EETV     DS KLRLDSW+SSRI GISRARVQSSIRSGLVSVN  I++K  H
Sbjct: 60  GVRLEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSH 116


>gb|ESW08113.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 458

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 47/94 (50%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
 Frame = -3

Query: 287 NPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVE--LDSQKLRLD 114
           +PS   L +T+  + ++I++A        +    R  NFSG+++EE V+  + S KLRLD
Sbjct: 25  SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 113 SWLSSRINGISRARVQSSIRSGLVSVNGHIINKK 12
           SW+SSRINGISRARVQSSI+SGLV VNG +++KK
Sbjct: 85  SWISSRINGISRARVQSSIKSGLVHVNGRVVDKK 118


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = -3

Query: 176 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
           N++GV++EETV+  + KLRLD+W+SSRI+GISRARVQSSIRSGLVSVNG +++K  H+
Sbjct: 54  NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHN 111


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = -3

Query: 176 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
           N++GV++EETV+  + KLRLD+W+SSRI+GISRARVQSSIRSGLVSVNG +++K  H+
Sbjct: 54  NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHN 111


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 38/58 (65%), Positives = 52/58 (89%)
 Frame = -3

Query: 176 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
           N++GV++EETV+  + KLRLD+W+SSRI+GISRARVQSSIRSGLVS+NG +++K  H+
Sbjct: 54  NYAGVQLEETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHN 111


>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
           X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
           PREDICTED: RNA pseudouridine synthase 2,
           chloroplastic-like isoform X2 [Glycine max]
          Length = 450

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 3/85 (3%)
 Frame = -3

Query: 260 TARAYSTSISAANFDSDDFQNPVSGRPN-NFSGVKIEETVE--LDSQKLRLDSWLSSRIN 90
           +A A + S SA + DSD       G P  NFSGV++EE V+  + S KLRLD+W+SSRIN
Sbjct: 41  SATASAASGSAGDSDSD-------GEPKLNFSGVRLEEAVDSRIGSGKLRLDNWISSRIN 93

Query: 89  GISRARVQSSIRSGLVSVNGHIINK 15
           GISRARVQSSI+SGLV VNG +++K
Sbjct: 94  GISRARVQSSIKSGLVHVNGRVVDK 118


>gb|ESW08114.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
          Length = 447

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
 Frame = -3

Query: 287 NPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVE--LDSQKLRLD 114
           +PS   L +T+  + ++I++A        +    R  NFSG+++EE V+  + S KLRLD
Sbjct: 25  SPSSLFLYATSYKFRSTIASACSGFTGDSDSDGERKLNFSGLRLEEAVDSRIGSAKLRLD 84

Query: 113 SWLSSRINGISRARVQSSIRSGLVSVNGHIINK 15
           SW+SSRINGISRARVQSSI+SGLV VNG +++K
Sbjct: 85  SWISSRINGISRARVQSSIKSGLVHVNGRVVDK 117


>gb|AFK43257.1| unknown [Lotus japonicus]
          Length = 209

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 51/100 (51%), Positives = 67/100 (67%), Gaps = 2/100 (2%)
 Frame = -3

Query: 308 PLSVSLRNPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETVE--LD 135
           PLS SL   +      +A A ++S  A N DS D   P +    N++GV++EE V+  + 
Sbjct: 23  PLSPSLLFSATNSKSRSAIARASSGFADNSDSGDGGEPRA----NYAGVQLEEIVDNRIG 78

Query: 134 SQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINK 15
           S K RLDSW+S+RINGISRARVQSSI+SGLV VNG ++NK
Sbjct: 79  SGKPRLDSWISTRINGISRARVQSSIKSGLVHVNGRVVNK 118


>gb|EXB81509.1| RNA pseudourine synthase 2 [Morus notabilis]
          Length = 369

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 40/67 (59%), Positives = 54/67 (80%)
 Frame = -3

Query: 215 SDDFQNPVSGRPNNFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSV 36
           SD  +  ++G   NF+GV++E TV +DS K+RLDSW+SSR++GISRARVQSSIR GLV V
Sbjct: 61  SDRNEEVLAGVRPNFAGVRLEATVAVDSGKVRLDSWISSRVSGISRARVQSSIRLGLVRV 120

Query: 35  NGHIINK 15
           NG +++K
Sbjct: 121 NGQVVDK 127


>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
           gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 930

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 54/119 (45%), Positives = 71/119 (59%), Gaps = 9/119 (7%)
 Frame = -3

Query: 332 SLSWHSVKPLSVSLRNPSLQKLISTARAYSTSISAANF--DSDDFQNPVSGRPN------ 177
           S S  SVK    SLR PS     S +  +S     +NF   S    N V+  P       
Sbjct: 510 SFSLISVK----SLRYPSSSPSSSLSLFFSFFPRVSNFVRASSGIPNLVACGPTEIIIPR 565

Query: 176 -NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
            N +G++IEETV+    K+RLDSW+SSR+NG+SRARVQSSIR GLV+VNG +++K  H+
Sbjct: 566 VNNAGLRIEETVDALKGKIRLDSWISSRVNGVSRARVQSSIRLGLVTVNGRVVDKVSHN 624


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
 Frame = -3

Query: 290 RNPSLQKLISTARAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETV---ELDSQKLR 120
           RNP      S +R +      +N  +D+    VS R  N++GV++EETV     DS KLR
Sbjct: 154 RNPK-----SCSRVFRILRDCSN-STDEPLVSVSSRRTNYAGVRLEETVVDVNSDSGKLR 207

Query: 119 LDSWLSSRINGISRARVQSSIRSGLVSVNGHIINK 15
           LDSW+SSRI GISRARVQSSIRSGLVSVN  I++K
Sbjct: 208 LDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDK 242


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/61 (63%), Positives = 52/61 (85%), Gaps = 3/61 (4%)
 Frame = -3

Query: 176 NFSGVKIEETVEL---DSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEH 6
           N+ G+++EETV++    S KLRLDSW+SSRI+GISRARVQSSI+SGLVSVNG +++K  H
Sbjct: 52  NYGGIRLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSH 111

Query: 5   S 3
           +
Sbjct: 112 N 112


>ref|XP_004500918.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cicer
           arietinum]
          Length = 438

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
 Frame = -3

Query: 254 RAYSTSISAANFDSDDFQNPVSGRPNNFSGVKIEETV--ELDSQKLRLDSWLSSRINGIS 81
           R  + ++S    DS+    P S    N++GV++EE V  E+ S KLRLD+W+SSRINGIS
Sbjct: 41  RGVARAVSGLADDSNSNGEPKS----NYAGVRLEEIVDGEIKSGKLRLDTWISSRINGIS 96

Query: 80  RARVQSSIRSGLVSVNGHIINK 15
           RARVQSSI++GLV VNG +++K
Sbjct: 97  RARVQSSIKAGLVHVNGRLVDK 118


>ref|XP_006302277.1| hypothetical protein CARUB_v10020321mg [Capsella rubella]
           gi|482570987|gb|EOA35175.1| hypothetical protein
           CARUB_v10020321mg [Capsella rubella]
          Length = 432

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/58 (63%), Positives = 49/58 (84%)
 Frame = -3

Query: 176 NFSGVKIEETVELDSQKLRLDSWLSSRINGISRARVQSSIRSGLVSVNGHIINKKEHS 3
           N +G++IEETV+    K+RLDSW+SSRING+SRARVQSSIR GLV+VNG +++K  H+
Sbjct: 65  NNAGLRIEETVDDLKGKIRLDSWISSRINGVSRARVQSSIRLGLVTVNGRVVDKVSHN 122