BLASTX nr result
ID: Rehmannia26_contig00030646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030646
(390 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 89 8e-16
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 87 2e-15
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 86 4e-15
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo... 86 4e-15
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 85 9e-15
gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indi... 85 9e-15
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 85 1e-14
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 84 1e-14
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 84 1e-14
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 84 1e-14
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 84 2e-14
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 84 3e-14
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 84 3e-14
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 84 3e-14
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 83 3e-14
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 82 6e-14
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 81 1e-13
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 81 2e-13
gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus pe... 80 2e-13
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 80 3e-13
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 88.6 bits (218), Expect = 8e-16
Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Frame = +1
Query: 7 NNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXX 186
NN G+K+C+ PT+SHLLFADDS +F A+ + L +IL+ Y S QL+N +K
Sbjct: 253 NNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALKDILDTYANASDQLINMQKSE 312
Query: 187 XXXXXXXXXXDK---SNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKKNS 357
K SN+ GI ++K YLGLP IGRSKK +FNY+ D + + S
Sbjct: 313 IYFSRNVPVTKKNTLSNMLWVSEGIGIRK---YLGLPSMIGRSKKSIFNYIKDRIWNRIS 369
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 87.0 bits (214), Expect = 2e-15
Identities = 45/115 (39%), Positives = 67/115 (58%)
Frame = +1
Query: 7 NNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXX 186
+ S G+KLCR GPT+SH+ FADD++ F +A++ L EI ++Y K SGQL+N EK
Sbjct: 100 DKSLLGIKLCRRGPTLSHMFFADDALFFLKATLGNVCRLMEIFKEYCKASGQLINGEKSS 159
Query: 187 XXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+ + + +++ +YLGLP GRSKKE Y++D VQ+K
Sbjct: 160 AYFSPNTPDQMSRLLGELMGFAEVEDPGKYLGLPTLWGRSKKEAVGYIVDRVQRK 214
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/117 (38%), Positives = 64/117 (54%)
Frame = +1
Query: 1 ASNNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEK 180
AS G ++CR P +SHL FADDSI+F +ASV + ++ +I+ KY + SGQ VN K
Sbjct: 662 ASEKKIHGAQICRGAPVVSHLFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSK 721
Query: 181 XXXXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+S I L ++ + +YLGLP IGRSKK F + + + KK
Sbjct: 722 TEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKK 778
>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
Length = 662
Score = 86.3 bits (212), Expect = 4e-15
Identities = 45/111 (40%), Positives = 63/111 (56%)
Frame = +1
Query: 19 QGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXX 198
QG+K+C N ++SHLLFADDS+I C A+ A L IL Y + SGQ++N EK
Sbjct: 352 QGIKVCHNATSVSHLLFADDSLIPCRANRGDAQNLQNILTLYEEFSGQMLNKEKFAIMFS 411
Query: 199 XXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+ + Q L K + RYLGLP+ +GR K +VF Y+ D + K+
Sbjct: 412 SNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKR 462
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 85.1 bits (209), Expect = 9e-15
Identities = 45/115 (39%), Positives = 63/115 (54%)
Frame = +1
Query: 7 NNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXX 186
+ G K RNGP ISHLLFADDS++F A+ + + +IL KY SGQ +N+EK
Sbjct: 668 SKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSE 727
Query: 187 XXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
K + LH ++ + +YLG+P GRSKK +F +LD + KK
Sbjct: 728 VSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKK 782
>gb|EEC67895.1| hypothetical protein OsI_35569 [Oryza sativa Indica Group]
Length = 724
Score = 85.1 bits (209), Expect = 9e-15
Identities = 44/111 (39%), Positives = 63/111 (56%)
Frame = +1
Query: 19 QGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXX 198
QG+K+C N ++SHLLFADDS+I C A+ A L IL Y + SGQ+++ EK
Sbjct: 182 QGIKVCHNATSVSHLLFADDSLIPCRANRGDAQNLQNILTLYEEFSGQMIDKEKFAIMFS 241
Query: 199 XXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+ + Q L K + RYLGLP+ +GR K +VF Y+ D + K+
Sbjct: 242 SNTGSEKRREVMQTLQINKQTMNERYLGLPVFVGRDKTKVFAYLKDRIWKR 292
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/110 (39%), Positives = 61/110 (55%)
Frame = +1
Query: 22 GLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXXX 201
G K RNGP ISHLLFA DS++FC+A++ + L +L+ Y K SGQ VNF+K
Sbjct: 121 GFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFGK 180
Query: 202 XXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+ Q L K + RYLGLP +GR+K F+++ + +K
Sbjct: 181 GLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQK 230
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 84.3 bits (207), Expect(2) = 1e-14
Identities = 42/119 (35%), Positives = 64/119 (53%)
Frame = +1
Query: 1 ASNNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEK 180
AS+ +G+++ P I+HL FADDS+ FC+A+V L ++ + Y SGQ +N +K
Sbjct: 1041 ASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQK 1100
Query: 181 XXXXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKKNS 357
+S + Q L +YLGLP GR KKE+F Y++D V+K+ S
Sbjct: 1101 SMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTS 1159
Score = 20.4 bits (41), Expect(2) = 1e-14
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 344 KKRILNWKSNFLSTA 388
KKR W + FLS A
Sbjct: 1155 KKRTSTWSARFLSPA 1169
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 84.3 bits (207), Expect(2) = 1e-14
Identities = 42/119 (35%), Positives = 64/119 (53%)
Frame = +1
Query: 1 ASNNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEK 180
AS+ +G+++ P I+HL FADDS+ FC+A+V L ++ + Y SGQ +N +K
Sbjct: 815 ASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQK 874
Query: 181 XXXXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKKNS 357
+S + Q L +YLGLP GR KKE+F Y++D V+K+ S
Sbjct: 875 SMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTS 933
Score = 20.4 bits (41), Expect(2) = 1e-14
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 344 KKRILNWKSNFLSTA 388
KKR W + FLS A
Sbjct: 929 KKRTSTWSARFLSPA 943
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/110 (35%), Positives = 69/110 (62%)
Frame = +1
Query: 22 GLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXXX 201
G+++C+ P++SHLLFADDS+I C A+ +A L IL+ Y + SGQ++N +K
Sbjct: 922 GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 981
Query: 202 XXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+K + AL+ + + RYLGLP+ +GRS+ ++F+Y+ + + ++
Sbjct: 982 NTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQR 1031
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/115 (38%), Positives = 64/115 (55%)
Frame = +1
Query: 7 NNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXX 186
+ + G K+C+N P ISHLLFADD +F +A QA + ILE Y SGQ +NF+K
Sbjct: 1085 SGTISGAKICKNAPIISHLLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSE 1144
Query: 187 XXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
K++I Q L ++ + +YLG+P +GRS+ F +V + V KK
Sbjct: 1145 VFYSRNVDDAVKASISQILGVQQVMGTGKYLGVPSMVGRSRISTFKFVKERVWKK 1199
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/110 (34%), Positives = 69/110 (62%)
Frame = +1
Query: 22 GLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXXX 201
G+++C+ P++SHLLFADDS+I C A+ +A L IL+ Y + SGQ++N +K
Sbjct: 867 GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 926
Query: 202 XXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+K + AL+ + + +YLGLP+ +GRS+ ++F+Y+ + + ++
Sbjct: 927 NTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQR 976
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/110 (34%), Positives = 69/110 (62%)
Frame = +1
Query: 22 GLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXXX 201
G+++C+ P++SHLLFADDS+I C A+ +A L IL+ Y + SGQ++N +K
Sbjct: 895 GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 954
Query: 202 XXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+K + AL+ + + +YLGLP+ +GRS+ ++F+Y+ + + ++
Sbjct: 955 NTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQR 1004
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/110 (34%), Positives = 69/110 (62%)
Frame = +1
Query: 22 GLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXXX 201
G+++C+ P++SHLLFADDS+I C A+ +A L IL+ Y + SGQ++N +K
Sbjct: 863 GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 922
Query: 202 XXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+K + AL+ + + +YLGLP+ +GRS+ ++F+Y+ + + ++
Sbjct: 923 NTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQR 972
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 83.2 bits (204), Expect = 3e-14
Identities = 45/114 (39%), Positives = 64/114 (56%)
Frame = +1
Query: 10 NSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXX 189
N G+K+ P +SHLLFADDS+ FC+A+ Q I+ EIL++Y +SGQ +NF K
Sbjct: 446 NLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSI 505
Query: 190 XXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
K++I L L YLGLP +G SK +VF++V D +Q +
Sbjct: 506 QFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSR 559
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 82.4 bits (202), Expect = 6e-14
Identities = 40/114 (35%), Positives = 62/114 (54%)
Frame = +1
Query: 10 NSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXX 189
N G+ LCR P++SHL FADDS +F A + L+ I +KY +SGQ ++ EK
Sbjct: 1025 NLLHGVNLCRGAPSVSHLFFADDSFLFLRADQQDCEQLSIIFQKYEMVSGQKIHLEKSCV 1084
Query: 190 XXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
D+ N+ L ++ + YLGLP +GRS+++ FN + + + KK
Sbjct: 1085 SFSINMDRTDQDNLAAVLGVRRVDQHDVYLGLPTHVGRSRRQCFNSLKERIWKK 1138
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/115 (35%), Positives = 64/115 (55%)
Frame = +1
Query: 7 NNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXX 186
+ G K R+GP ISHL FADDS++F A+ + I+ +IL +Y SGQ +N+EK
Sbjct: 665 DKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSE 724
Query: 187 XXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
K + L+ ++ + +YLG+P GRSKK +F+ ++D + KK
Sbjct: 725 VSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKK 779
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/119 (32%), Positives = 65/119 (54%)
Frame = +1
Query: 1 ASNNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEK 180
AS+ +G+++ P I+HL FADDS+ FC+A+V L ++ + Y SGQ +N +K
Sbjct: 280 ASSGDIRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQK 339
Query: 181 XXXXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKKNS 357
++ + L+ +YLGLP GR KKE+FNY++D V+++ +
Sbjct: 340 SLITFGSRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTA 398
>gb|EMJ04651.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/111 (36%), Positives = 58/111 (52%)
Frame = +1
Query: 19 QGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKXXXXXX 198
QG+ +CR PT+SHL FADDS +F +A+ +L I E Y SGQ +N +K
Sbjct: 1083 QGIVICRGAPTVSHLFFADDSFVFAKATDNNCGVLKHIFEVYEHASGQQINCQKSCVAFS 1142
Query: 199 XXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+S + L ++ YLGLP+ +GR+K F Y+ + V KK
Sbjct: 1143 ANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKK 1193
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/116 (34%), Positives = 62/116 (53%)
Frame = +1
Query: 4 SNNSFQGLKLCRNGPTISHLLFADDSIIFCEASVAQADILNEILEKYNKISGQLVNFEKX 183
+N QG+K+C + P+ISHL FADDS IF A + +I Y +SGQ +N+EK
Sbjct: 418 TNGEIQGVKVCTDAPSISHLYFADDSFIFSRAEERDMLCMKDIFVTYETMSGQQINYEKS 477
Query: 184 XXXXXXXXXXXDKSNICQALHGIKLQKSCRYLGLPLGIGRSKKEVFNYVLDAVQKK 351
+ ++ L +++ +YLGLP + SK E F Y++D V+K+
Sbjct: 478 SVSFSRNVPLWKQHDLAAVLGVQRVENHEKYLGLPTELSYSKDEAFRYLIDRVRKR 533