BLASTX nr result
ID: Rehmannia26_contig00030606
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia26_contig00030606
(595 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlise... 117 2e-29
ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopan... 94 2e-17
ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopan... 94 2e-17
ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapan... 94 2e-17
ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapan... 94 2e-17
ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassai... 94 2e-17
ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassai... 94 2e-17
gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sin... 92 1e-16
gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stram... 89 7e-16
ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygro... 89 7e-16
ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula] 89 7e-16
ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberi... 89 1e-15
ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine... 88 2e-15
ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloro... 87 3e-15
gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinque... 87 4e-15
ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura ... 85 1e-14
ref|XP_003605595.1| 30S ribosomal protein S12 [Medicago truncatu... 84 2e-14
emb|CCQ71644.1| ribosomal protein S12 (chloroplast) [Salvia milt... 84 3e-14
ref|YP_007475940.1| ribosomal protein S12 [Bismarckia nobilis] g... 84 3e-14
ref|YP_007474394.1| ribosomal protein S12 (chloroplast) [Magnoli... 84 3e-14
>gb|EPS74396.1| hypothetical protein M569_00359, partial [Genlisea aurea]
Length = 106
Score = 117 bits (292), Expect(3) = 2e-29
Identities = 53/58 (91%), Positives = 54/58 (93%)
Frame = -1
Query: 211 KAGFLLFFVSAHDLNESHIHPSTCSSTLRTSPKRGGFRDISNWLSCISNKLFNSWHVE 38
K G L+FFVSAHDLNESHIHPSTCSSTLRTSPK GGFRDISNWLSCISNKLFN WHVE
Sbjct: 46 KPGLLVFFVSAHDLNESHIHPSTCSSTLRTSPKGGGFRDISNWLSCISNKLFNGWHVE 103
Score = 30.0 bits (66), Expect(3) = 2e-29
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -3
Query: 341 IGFAPMETINFIHNRGINLLIF 276
IGFAPM+TI FIH +L+F
Sbjct: 1 IGFAPMKTIRFIHISSYLVLVF 22
Score = 28.5 bits (62), Expect(3) = 2e-29
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2
Query: 282 YF*IVNGIPSSILSYSMVLIIQTGK 208
+F IVNG+ SS L YS+ II +GK
Sbjct: 22 FFLIVNGVRSSCLCYSLRHIIPSGK 46
>ref|YP_008815228.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599672|gb|AGG39364.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 142
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008815183.1| ribosomal protein S12 (chloroplast) [Kalopanax septemlobus]
gi|458599659|gb|AGG39351.1| ribosomal protein S12
(chloroplast) [Kalopanax septemlobus]
Length = 143
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008815054.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599431|gb|AGG39190.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 161
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008815009.1| ribosomal protein S12 (chloroplast) [Metapanax delavayi]
gi|458599418|gb|AGG39177.1| ribosomal protein S12
(chloroplast) [Metapanax delavayi]
Length = 165
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008814967.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603148|ref|YP_008815141.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940339|ref|YP_008814880.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599150|gb|AGG39016.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599252|gb|AGG39103.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599584|gb|AGG39277.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 149
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>ref|YP_008814922.1| ribosomal protein S12 (chloroplast) [Brassaiopsis hainla]
gi|558603135|ref|YP_008815096.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
gi|563940326|ref|YP_008814835.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599137|gb|AGG39003.1| ribosomal protein S12
(chloroplast) [Aralia undulata]
gi|458599239|gb|AGG39090.1| ribosomal protein S12
(chloroplast) [Brassaiopsis hainla]
gi|458599571|gb|AGG39264.1| ribosomal protein S12
(chloroplast) [Schefflera delavayi]
Length = 150
Score = 94.4 bits (233), Expect = 2e-17
Identities = 46/52 (88%), Positives = 49/52 (94%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLVQIMSWDKRKK 52
>gb|AGZ19166.1| ribosomal protein S12 (chloroplast) [Camellia sinensis]
Length = 60
Score = 91.7 bits (226), Expect = 1e-16
Identities = 45/56 (80%), Positives = 48/56 (85%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQETRF 211
MPTIKQLIRNTRQPIRNVTKSPAL GCPQRRGTCTRVYVRLV IM K ++ +F
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALGGCPQRRGTCTRVYVRLVQIMGWDKTKERKQF 56
>gb|AEQ36962.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
Length = 122
Score = 89.4 bits (220), Expect = 7e-16
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 169
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_004940490.1| rps12 gene product (chloroplast) [Boea hygrometrica]
gi|340549431|gb|AEK53253.1| ribosomal protein S12
(chloroplast) [Boea hygrometrica]
Length = 134
Score = 89.4 bits (220), Expect = 7e-16
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 169
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_001381684.1| ribosomal protein S12 [Medicago truncatula]
Length = 127
Score = 89.4 bits (220), Expect = 7e-16
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 169
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|YP_008592664.1| ribosomal protein S12 (chloroplast) [Berberis bealei]
gi|536462705|gb|AGU37070.1| ribosomal protein S12
(chloroplast) [Berberis bealei]
Length = 46
Score = 88.6 bits (218), Expect = 1e-15
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IM 178
MPTIKQLIRNTRQPI+NVTKSPALRGCPQRRGTCTRVYVRLV I+
Sbjct: 1 MPTIKQLIRNTRQPIKNVTKSPALRGCPQRRGTCTRVYVRLVQII 45
>ref|YP_008816226.1| ribosomal protein S12 (chloroplast) [Glycine soja]
gi|558604199|ref|YP_008816270.1| ribosomal protein S12
(chloroplast) [Glycine soja] gi|557469752|gb|AHA04005.1|
ribosomal protein S12 (chloroplast) [Glycine soja]
gi|557469791|gb|AHA04044.1| ribosomal protein S12
(chloroplast) [Glycine soja]
Length = 127
Score = 88.2 bits (217), Expect = 2e-15
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 169
MPT+KQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 1 MPTMKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>ref|XP_004516896.1| PREDICTED: 30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum] gi|502181875|ref|XP_004516900.1| PREDICTED:
30S ribosomal protein S12, chloroplastic-like [Cicer
arietinum]
Length = 42
Score = 87.4 bits (215), Expect = 3e-15
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 169
MPTIKQLIRN RQPIRNVTKSPALRGCPQRRGTCTRVYVRLV
Sbjct: 1 MPTIKQLIRNARQPIRNVTKSPALRGCPQRRGTCTRVYVRLV 42
>gb|ABX26257.1| ribosomal protein S12-like protein [Panax quinquefolius]
Length = 65
Score = 86.7 bits (213), Expect = 4e-15
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQ 199
MPTIKQLIRNTRQPIRNV KSPALRGCPQRRGTCTR YV LV IMS K+++
Sbjct: 1 MPTIKQLIRNTRQPIRNVPKSPALRGCPQRRGTCTRGYVGLVQIMSWDKRKK 52
>ref|YP_006503815.1| ribosomal protein S12 (chloroplast) [Datura stramonium]
gi|350996572|gb|AEQ37083.1| ribosomal protein S12
[Datura stramonium]
Length = 137
Score = 85.1 bits (209), Expect = 1e-14
Identities = 41/56 (73%), Positives = 44/56 (78%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYVRLV*IMS*HKKEQETRF 211
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY+ + S K + F
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYISCTVLKSGSKGDLSVNF 56
>ref|XP_003605595.1| 30S ribosomal protein S12 [Medicago truncatula]
gi|355506650|gb|AES87792.1| 30S ribosomal protein S12
[Medicago truncatula]
Length = 162
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYV 160
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYV
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYV 39
>emb|CCQ71644.1| ribosomal protein S12 (chloroplast) [Salvia miltiorrhiza]
Length = 122
Score = 84.0 bits (206), Expect = 3e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYV 160
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY+
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYI 39
>ref|YP_007475940.1| ribosomal protein S12 [Bismarckia nobilis]
gi|449326490|gb|AGE93072.1| ribosomal protein S12
[Bismarckia nobilis]
Length = 123
Score = 84.0 bits (206), Expect = 3e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYV 160
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY+
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYI 39
>ref|YP_007474394.1| ribosomal protein S12 (chloroplast) [Magnolia officinalis]
gi|452848795|ref|YP_007474476.1| ribosomal protein S12
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|452848880|ref|YP_007474560.1| ribosomal protein S12
(chloroplast) [Magnolia grandiflora]
gi|372862275|gb|AEX98358.1| ribosomal protein S12
(chloroplast) [Magnolia denudata]
gi|372862445|gb|AEX98526.1| ribosomal protein S12
(chloroplast) [Magnolia officinalis]
gi|372862528|gb|AEX98608.1| ribosomal protein S12
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862613|gb|AEX98692.1| ribosomal protein S12
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862698|gb|AEX98776.1| ribosomal protein S12
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862867|gb|AEX98943.1| ribosomal protein S12
(chloroplast) [Magnolia grandiflora]
gi|372863037|gb|AEX99111.1| ribosomal protein S12
(chloroplast) [Magnolia grandiflora]
Length = 123
Score = 84.0 bits (206), Expect = 3e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +2
Query: 44 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYV 160
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVY+
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYI 39